Guide to the Human Genome
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Name: LOC732435 Sequence: fasta or formatted (195aa) NCBI GI: 239752555
Description:

PREDICTED: similar to Ovostatin homolog 2

Referenced in:

Protease Inhibitors

Other entries for this name:
alt prot [136aa] PREDICTED: similar to Ovostatin homolog 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         11           2
 C cysteine            2.1          4           1
 D aspartate           6.2         12           2
 E glutamate           5.6         11           1
 F phenylalanine       8.7         17           2
 G glycine             2.6          5           1
 H histidine           3.1          6           1
 I isoleucine          4.1          8           1
 K lysine              4.6          9           1
 L leucine            10.3         20           2
 M methionine          1.0          2           1
 N asparagine          6.2         12           1
 P proline             5.1         10           1
 Q glutamine           3.6          7           1
 R arginine            2.6          5           1
 S serine             10.3         20           3
 T threonine           5.1         10           2
 V valine              7.2         14           2
 W tryptophan          1.0          2           1
 Y tyrosine            5.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Ovostatin homolog 2 
LOC732434             0.968   PREDICTED: similar to Ovostatin homolog 2 
LOC100133592          0.968   PREDICTED: similar to ovostatin-2 
OVOS2                 0.931   PREDICTED: ovostatin 2 
OVOS                  0.926   PREDICTED: ovostatin 
LOC732435             0.594   PREDICTED: similar to Ovostatin homolog 2 
PZP                   0.236   pregnancy-zone protein 
A2M                   0.212   alpha-2-macroglobulin precursor 
A2ML1                 0.151   alpha-2-macroglobulin-like 1 
CPAMD8                0.021   C3 and PZP-like, alpha-2-macroglobulin domain conta...
CD109                 0.016   CD109 antigen isoform 3 precursor 
CD109                 0.016   CD109 antigen isoform 2 precursor 
CD109                 0.016   CD109 antigen isoform 1 precursor 
ACRC                  0.013   ACRC protein 
SEPN1                 0.008   selenoprotein N, 1 isoform 2 precursor 
SEPN1                 0.008   selenoprotein N, 1 isoform 1 precursor 
ITPR1                 0.005   inositol 1,4,5-triphosphate receptor, type 1 isofor...
ITPR1                 0.005   inositol 1,4,5-triphosphate receptor, type 1 isofor...
GIMAP5                0.005   GTPase, IMAP family member 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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