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Search of human proteins with 239752538
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752538 PREDICTED: hypothetical protein, partial [Homo
sapiens]
(172 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752538 PREDICTED: hypothetical protein, partial [Homo sapi... 333 3e-92
gi|113427727 PREDICTED: hypothetical protein [Homo sapiens] 333 3e-92
gi|169212923 PREDICTED: hypothetical protein [Homo sapiens] 331 2e-91
gi|169206039 PREDICTED: hypothetical protein [Homo sapiens] 308 2e-84
gi|113424287 PREDICTED: hypothetical protein [Homo sapiens] 308 2e-84
gi|113424103 PREDICTED: hypothetical protein [Homo sapiens] 308 2e-84
gi|17158023 hypothetical protein LOC85395 [Homo sapiens] 292 9e-80
gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens] 40 0.001
gi|109255228 centrosomal protein 170kDa isoform alpha [Homo sapi... 40 0.001
gi|109255232 centrosomal protein 170kDa isoform gamma [Homo sapi... 40 0.001
gi|194294519 nuclear receptor subfamily 1, group H, member 3 iso... 34 0.071
gi|194294517 nuclear receptor subfamily 1, group H, member 3 iso... 34 0.071
gi|148746195 trichohyalin [Homo sapiens] 33 0.12
gi|194353964 coiled-coil domain containing 157 [Homo sapiens] 33 0.16
gi|19923191 minichromosome maintenance complex component 3 assoc... 32 0.35
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 31 0.46
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 31 0.46
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 31 0.46
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 31 0.46
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 31 0.60
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 30 0.79
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 30 0.79
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 30 0.79
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 30 0.79
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 30 0.79
gi|166795299 solute carrier family 2 (facilitated glucose transp... 30 1.0
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora... 30 1.3
gi|23397678 signal transducer and activator of transcription 6 [... 30 1.3
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 30 1.3
gi|5174715 transcription factor-like 1 [Homo sapiens] 30 1.3
>gi|239752538 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 172
Score = 333 bits (855), Expect = 3e-92
Identities = 172/172 (100%), Positives = 172/172 (100%)
Query: 1 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQK 60
IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQK
Sbjct: 1 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQK 60
Query: 61 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 120
IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL
Sbjct: 61 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 120
Query: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 172
SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL
Sbjct: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 172
>gi|113427727 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 333 bits (855), Expect = 3e-92
Identities = 172/172 (100%), Positives = 172/172 (100%)
Query: 1 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQK 60
IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQK
Sbjct: 10 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQK 69
Query: 61 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 120
IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL
Sbjct: 70 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 129
Query: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 172
SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL
Sbjct: 130 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 181
>gi|169212923 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 331 bits (849), Expect = 2e-91
Identities = 170/172 (98%), Positives = 171/172 (99%)
Query: 1 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQK 60
IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKT+LPKKEKMKLRREQCLQK
Sbjct: 31 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTILPKKEKMKLRREQCLQK 90
Query: 61 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 120
IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSR QACSRESNKPWPSEL
Sbjct: 91 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRHQACSRESNKPWPSEL 150
Query: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 172
SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL
Sbjct: 151 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 202
>gi|169206039 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 308 bits (788), Expect = 2e-84
Identities = 164/172 (95%), Positives = 165/172 (95%)
Query: 1 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQK 60
IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQ LQK
Sbjct: 10 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQWLQK 69
Query: 61 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 120
IEAIKLAEQKHREERRRRATVVVG LHPLRDALPELLGLEAGSRRQ SRESNKP PSEL
Sbjct: 70 IEAIKLAEQKHREERRRRATVVVGDLHPLRDALPELLGLEAGSRRQTRSRESNKPRPSEL 129
Query: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 172
SRMSAAQRQQLLEE RTRFQELL+SPAYRAS LVAIGQTLARQMQLEDGGQL
Sbjct: 130 SRMSAAQRQQLLEEERTRFQELLASPAYRASPLVAIGQTLARQMQLEDGGQL 181
>gi|113424287 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 308 bits (788), Expect = 2e-84
Identities = 164/172 (95%), Positives = 165/172 (95%)
Query: 1 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQK 60
IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQ LQK
Sbjct: 10 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQWLQK 69
Query: 61 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 120
IEAIKLAEQKHREERRRRATVVVG LHPLRDALPELLGLEAGSRRQ SRESNKP PSEL
Sbjct: 70 IEAIKLAEQKHREERRRRATVVVGDLHPLRDALPELLGLEAGSRRQTRSRESNKPRPSEL 129
Query: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 172
SRMSAAQRQQLLEE RTRFQELL+SPAYRAS LVAIGQTLARQMQLEDGGQL
Sbjct: 130 SRMSAAQRQQLLEEERTRFQELLASPAYRASPLVAIGQTLARQMQLEDGGQL 181
>gi|113424103 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 308 bits (788), Expect = 2e-84
Identities = 164/172 (95%), Positives = 165/172 (95%)
Query: 1 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQK 60
IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQ LQK
Sbjct: 10 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQWLQK 69
Query: 61 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 120
IEAIKLAEQKHREERRRRATVVVG LHPLRDALPELLGLEAGSRRQ SRESNKP PSEL
Sbjct: 70 IEAIKLAEQKHREERRRRATVVVGDLHPLRDALPELLGLEAGSRRQTRSRESNKPRPSEL 129
Query: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 172
SRMSAAQRQQLLEE RTRFQELL+SPAYRAS LVAIGQTLARQMQLEDGGQL
Sbjct: 130 SRMSAAQRQQLLEEERTRFQELLASPAYRASPLVAIGQTLARQMQLEDGGQL 181
>gi|17158023 hypothetical protein LOC85395 [Homo sapiens]
Length = 230
Score = 292 bits (748), Expect = 9e-80
Identities = 162/184 (88%), Positives = 163/184 (88%), Gaps = 15/184 (8%)
Query: 4 FINTNIFARTKIDPSALVQKLELDVRSVTS---------------IRRGAEAKTVLPKKE 48
FINTNIFARTKIDPSALVQKLELDVRSVTS IRRGAEAKTVLPKKE
Sbjct: 47 FINTNIFARTKIDPSALVQKLELDVRSVTSVRRGEAGSSARSVPSIRRGAEAKTVLPKKE 106
Query: 49 KMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQAC 108
KMKLRREQ LQKIEAIKLAEQKHREERRRRATVVVG LHPLRDALPELLGLEAGSRRQA
Sbjct: 107 KMKLRREQWLQKIEAIKLAEQKHREERRRRATVVVGDLHPLRDALPELLGLEAGSRRQAR 166
Query: 109 SRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLED 168
SRESNKP PSELSRMSAAQRQQLLEE RTRFQELL+SPAYRAS LVAIGQTLARQMQLED
Sbjct: 167 SRESNKPRPSELSRMSAAQRQQLLEEERTRFQELLASPAYRASPLVAIGQTLARQMQLED 226
Query: 169 GGQL 172
GGQL
Sbjct: 227 GGQL 230
>gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens]
Length = 1486
Score = 39.7 bits (91), Expect = 0.001
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 7 TNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVL------PKKEKMKLRREQCLQK 60
T ++ + K D + K+ V T ++ G + KT+L P KEK + +E L K
Sbjct: 586 TQVYQKDKQDADRPLSKMNRAVNGET-LKTGGDNKTLLHLGSSAPGKEKSETDKETSLVK 644
Query: 61 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 120
KL +Q+ REE P + + + G R + +ES P +
Sbjct: 645 QTLAKLQQQEQREE---------AQWTPTKLSSKNVSGQTDKCREETFKQESQPPEKNSG 695
Query: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQ 163
S R E R + +E+L S + ++L RQ
Sbjct: 696 HSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSLVRQ 738
>gi|109255228 centrosomal protein 170kDa isoform alpha [Homo
sapiens]
Length = 1584
Score = 39.7 bits (91), Expect = 0.001
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 7 TNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVL------PKKEKMKLRREQCLQK 60
T ++ + K D + K+ V T ++ G + KT+L P KEK + +E L K
Sbjct: 684 TQVYQKDKQDADRPLSKMNRAVNGET-LKTGGDNKTLLHLGSSAPGKEKSETDKETSLVK 742
Query: 61 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 120
KL +Q+ REE P + + + G R + +ES P +
Sbjct: 743 QTLAKLQQQEQREE---------AQWTPTKLSSKNVSGQTDKCREETFKQESQPPEKNSG 793
Query: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQ 163
S R E R + +E+L S + ++L RQ
Sbjct: 794 HSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSLVRQ 836
>gi|109255232 centrosomal protein 170kDa isoform gamma [Homo
sapiens]
Length = 1460
Score = 39.7 bits (91), Expect = 0.001
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 7 TNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVL------PKKEKMKLRREQCLQK 60
T ++ + K D + K+ V T ++ G + KT+L P KEK + +E L K
Sbjct: 586 TQVYQKDKQDADRPLSKMNRAVNGET-LKTGGDNKTLLHLGSSAPGKEKSETDKETSLVK 644
Query: 61 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 120
KL +Q+ REE P + + + G R + +ES P +
Sbjct: 645 QTLAKLQQQEQREE---------AQWTPTKLSSKNVSGQTDKCREETFKQESQPPEKNSG 695
Query: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQ 163
S R E R + +E+L S + ++L RQ
Sbjct: 696 HSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSLVRQ 738
>gi|194294519 nuclear receptor subfamily 1, group H, member 3
isoform c [Homo sapiens]
Length = 402
Score = 33.9 bits (76), Expect = 0.071
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 54 REQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAG------SRRQA 107
RE+C+ E I+L + K +EE + AT + LP+L + G + +Q
Sbjct: 119 REECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQ 178
Query: 108 CSRESNK------PWPSELSRMSAAQRQQ 130
C+R S PWP S RQQ
Sbjct: 179 CNRRSFSDRLRVTPWPMAPDPHSREARQQ 207
>gi|194294517 nuclear receptor subfamily 1, group H, member 3
isoform a [Homo sapiens]
Length = 447
Score = 33.9 bits (76), Expect = 0.071
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 54 REQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAG------SRRQA 107
RE+C+ E I+L + K +EE + AT + LP+L + G + +Q
Sbjct: 164 REECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQ 223
Query: 108 CSRESNK------PWPSELSRMSAAQRQQ 130
C+R S PWP S RQQ
Sbjct: 224 CNRRSFSDRLRVTPWPMAPDPHSREARQQ 252
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 33.1 bits (74), Expect = 0.12
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 22 QKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATV 81
++ E +R +RR + + + + +LRREQ L++ + ++ +Q RE++ RR
Sbjct: 371 ERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQE 430
Query: 82 VVGHLHP-LRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQ 140
H ++ + L E RR RE + R +R Q EE R R+
Sbjct: 431 EERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKRDQ-EEERRERWL 489
Query: 141 EL 142
+L
Sbjct: 490 KL 491
Score = 32.0 bits (71), Expect = 0.27
Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Query: 23 KLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVV 82
KLE + R RR + + ++ + +L+R++ ++++ +EQ+ R E+ R +
Sbjct: 490 KLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQL 549
Query: 83 VGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQEL 142
+ R LE R Q RE + L R ++Q+L E R ++
Sbjct: 550 LKREEEKR--------LEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQR 601
Query: 143 L 143
L
Sbjct: 602 L 602
Score = 32.0 bits (71), Expect = 0.27
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 20/119 (16%)
Query: 29 RSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHP 88
R + + R + LP++E+ + RR Q ++ + ++ E++ + +RR RA L
Sbjct: 796 RQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRERAQ----QLQE 851
Query: 89 LRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPA 147
D L E RR++ + ++ W R QL EE + R L + PA
Sbjct: 852 EEDGLQ-----EDQERRRSQEQRRDQKW-----------RWQLEEERKRRRHTLYAKPA 894
Score = 31.2 bits (69), Expect = 0.46
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 7/155 (4%)
Query: 21 VQKLELDVRSVTSIRRGA---EAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRR 77
V++LE + R ++R E + L K E+ + RR+Q L++ + + ++ REE
Sbjct: 607 VERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEE 666
Query: 78 RATVVVGHLHPLRDALPELLGLEAGSRRQAC-SRESNKPWPSEL---SRMSAAQRQQLLE 133
R + H EL E R+ SR W E +R S + +
Sbjct: 667 RLEQRLKREHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVYSRPRKQ 726
Query: 134 EGRTRFQELLSSPAYRASTLVAIGQTLARQMQLED 168
EG+ R QE R S L + A + Q E+
Sbjct: 727 EGQRRRQEQEEKRRRRESELQWQEEERAHRQQQEE 761
Score = 30.8 bits (68), Expect = 0.60
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 6/143 (4%)
Query: 25 ELDVRSVTSIRRGAEAKTVLPK-KEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVV 83
E + R ++R E + + + + + +LRREQ ++ + +K E+K E+ RR +
Sbjct: 510 EQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRL-- 567
Query: 84 GHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELL 143
+ +LL E R+Q RE + L R +R + E R +
Sbjct: 568 --KREQEERRDQLLKREEERRQQRLKREQEERLEQRLKR-EEVERLEQEERREQRLKREE 624
Query: 144 SSPAYRASTLVAIGQTLARQMQL 166
R L + Q RQ QL
Sbjct: 625 PEEERRQQLLKSEEQEERRQQQL 647
Score = 28.1 bits (61), Expect = 3.9
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 46 KKEKMKLRREQCLQKIEAIKLAEQ--KHREERRRRATVVVGHLHPLRDALPELLGLEAGS 103
++++ +LRREQ L++ + + EQ + RE++ RR + + L E
Sbjct: 294 EQQQQRLRREQQLRRKQEEERREQQEERREQQERR--------EQQEERREQQLRREQEE 345
Query: 104 RRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQ 163
RR+ R + E ++ Q ++ E+ R Q+L R + Q L R+
Sbjct: 346 RREQQLRREQEEERRE-QQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRRE 404
Query: 164 MQLEDGGQL 172
QL QL
Sbjct: 405 QQLRREQQL 413
Score = 28.1 bits (61), Expect = 3.9
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 45 PKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLH----PLRDALPELLGLE 100
P+K + + R QC ++ E + EQ REER +R + + ++ +LL E
Sbjct: 1098 PEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREE 1157
Query: 101 AGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQE 141
RR+ +E + + E + + Q L EE R QE
Sbjct: 1158 PEKRRR---QELERQYREE-EELQQEEEQLLREEQEKRRQE 1194
Score = 27.7 bits (60), Expect = 5.1
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 34 IRRGAEAKTVLPKKEKMKLRREQCLQKIEA-IKLAEQKHREERRRRATVVVGHLHPLR-- 90
++R E + ++ K +L+R+Q ++ E +KL E++ RE++ RR + R
Sbjct: 458 LKREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQ 517
Query: 91 --------DALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLE-EGRTRFQE 141
+ L + L E RR+ R E R+ +R+Q L+ E R +
Sbjct: 518 RLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRDQ 577
Query: 142 LL 143
LL
Sbjct: 578 LL 579
>gi|194353964 coiled-coil domain containing 157 [Homo sapiens]
Length = 752
Score = 32.7 bits (73), Expect = 0.16
Identities = 24/92 (26%), Positives = 41/92 (44%)
Query: 74 ERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLE 133
E+R+ T + H+ LR L E G + G R+QA E R A + +Q L
Sbjct: 278 EQRKDLTRLSKHVEALRAQLEEAEGQKDGLRKQAGKLEQALKQEQGARRRQAEEDEQCLS 337
Query: 134 EGRTRFQELLSSPAYRASTLVAIGQTLARQMQ 165
E Q+LL+ + + + + + L +Q +
Sbjct: 338 EWEHDKQQLLTETSDLKTKMATLERELKQQRE 369
>gi|19923191 minichromosome maintenance complex component 3 associated
protein [Homo sapiens]
Length = 1980
Score = 31.6 bits (70), Expect = 0.35
Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 26/123 (21%)
Query: 69 QKHREERRRRATVVVGHLHPLRDALP-ELLGLEAGSRRQA-CSRESNKPWPSELSRMSAA 126
Q +E + R + + HP + P LL + +R C++E P +L R ++A
Sbjct: 1798 QTQKELQLREGRLAIKPFHPSANNFPIPLLHMHRNWKRSTECAQEGRIPSTEDLMRGASA 1857
Query: 127 ------------------------QRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLAR 162
Q QQ L E F +L S P Y TLV++ T+
Sbjct: 1858 EELLAQCLSSSLLLEKEENKRFEDQLQQWLSEDSGAFTDLTSLPLYLPQTLVSLSHTIEP 1917
Query: 163 QMQ 165
M+
Sbjct: 1918 VMK 1920
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 31.2 bits (69), Expect = 0.46
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Query: 12 RTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKH 71
R + + + V KL+ +V SVT + AE K + K+ L + LQ + + E +
Sbjct: 1273 RARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQ--LQDTQELLQEETRQ 1330
Query: 72 REERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQL 131
+ + + + L+D L E + + R S + + S+ A +
Sbjct: 1331 KLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERH-ISTLNIQLSDSKKKLQDFASTVEA 1389
Query: 132 LEEGRTRFQE 141
LEEG+ RFQ+
Sbjct: 1390 LEEGKKRFQK 1399
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 31.2 bits (69), Expect = 0.46
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Query: 12 RTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKH 71
R + + + V KL+ +V SVT + AE K + K+ L + LQ + + E +
Sbjct: 1280 RARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQ--LQDTQELLQEETRQ 1337
Query: 72 REERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQL 131
+ + + + L+D L E + + R S + + S+ A +
Sbjct: 1338 KLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERH-ISTLNIQLSDSKKKLQDFASTVEA 1396
Query: 132 LEEGRTRFQE 141
LEEG+ RFQ+
Sbjct: 1397 LEEGKKRFQK 1406
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 31.2 bits (69), Expect = 0.46
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Query: 12 RTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKH 71
R + + + V KL+ +V SVT + AE K + K+ L + LQ + + E +
Sbjct: 1280 RARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQ--LQDTQELLQEETRQ 1337
Query: 72 REERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQL 131
+ + + + L+D L E + + R S + + S+ A +
Sbjct: 1338 KLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERH-ISTLNIQLSDSKKKLQDFASTVEA 1396
Query: 132 LEEGRTRFQE 141
LEEG+ RFQ+
Sbjct: 1397 LEEGKKRFQK 1406
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 31.2 bits (69), Expect = 0.46
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Query: 12 RTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKH 71
R + + + V KL+ +V SVT + AE K + K+ L + LQ + + E +
Sbjct: 1273 RARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQ--LQDTQELLQEETRQ 1330
Query: 72 REERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQL 131
+ + + + L+D L E + + R S + + S+ A +
Sbjct: 1331 KLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERH-ISTLNIQLSDSKKKLQDFASTVEA 1389
Query: 132 LEEGRTRFQE 141
LEEG+ RFQ+
Sbjct: 1390 LEEGKKRFQK 1399
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 30.8 bits (68), Expect = 0.60
Identities = 29/134 (21%), Positives = 64/134 (47%), Gaps = 18/134 (13%)
Query: 24 LELDVRSVTSIRRGAEAKTVLPKK---------EKMKLRREQCLQKIEAIKLAEQKHREE 74
+E + + + ++RR EA+ + +K E++KL+RE+ L+K+ + ++ +EE
Sbjct: 535 VEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEE 594
Query: 75 RRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSR-----ESNKPWPSELSRMSAAQRQ 129
++++ + + E E ++++A ++ E+ + E R+ Q+
Sbjct: 595 KKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQ- 653
Query: 130 QLLEEGRTRFQELL 143
EE R QELL
Sbjct: 654 ---EEEERRHQELL 664
Score = 28.1 bits (61), Expect = 3.9
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 34 IRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRA 79
+R+ AEAK + ++E+ + +E+ Q+ + EQ+ RE+ R+ A
Sbjct: 675 LRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLA 720
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sapiens]
Length = 1293
Score = 30.4 bits (67), Expect = 0.79
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 28/170 (16%)
Query: 29 RSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHP 88
R +R E + ++E +LR E+ +K + +++ QK +R++ + L
Sbjct: 846 REEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQEALRRLQQ 905
Query: 89 LRDA-------LPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQE 141
+ LP S AC ++ +E+ ++ + +QL EE R + +E
Sbjct: 906 QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSL-AEIQKLEEERERQLREEQRRQQRE 964
Query: 142 LL--------------------SSPAYRASTLVAIGQTLARQMQLEDGGQ 171
L+ S P+ +L+ I Q ARQMQ + Q
Sbjct: 965 LMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQ 1014
Score = 28.5 bits (62), Expect = 3.0
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 19 ALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRR 78
AL Q +L+ + + + K+E+ + +R++ L++ + L Q+ E +RR
Sbjct: 716 ALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRRE 775
Query: 79 ATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTR 138
+ +AL E RRQ E + L R+ +R+ EE R +
Sbjct: 776 EEELARRKQ--EEALRRQREQEIALRRQR-EEEERQQQEEALRRLEERRRE---EEERRK 829
Query: 139 FQELL 143
+ELL
Sbjct: 830 QEELL 834
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sapiens]
Length = 1320
Score = 30.4 bits (67), Expect = 0.79
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 28/170 (16%)
Query: 29 RSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHP 88
R +R E + ++E +LR E+ +K + +++ QK +R++ + L
Sbjct: 873 REEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQEALRRLQQ 932
Query: 89 LRDA-------LPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQE 141
+ LP S AC ++ +E+ ++ + +QL EE R + +E
Sbjct: 933 QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSL-AEIQKLEEERERQLREEQRRQQRE 991
Query: 142 LL--------------------SSPAYRASTLVAIGQTLARQMQLEDGGQ 171
L+ S P+ +L+ I Q ARQMQ + Q
Sbjct: 992 LMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQ 1041
Score = 28.5 bits (62), Expect = 3.0
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 19 ALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRR 78
AL Q +L+ + + + K+E+ + +R++ L++ + L Q+ E +RR
Sbjct: 743 ALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRRE 802
Query: 79 ATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTR 138
+ +AL E RRQ E + L R+ +R+ EE R +
Sbjct: 803 EEELARRKQ--EEALRRQREQEIALRRQR-EEEERQQQEEALRRLEERRRE---EEERRK 856
Query: 139 FQELL 143
+ELL
Sbjct: 857 QEELL 861
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
Length = 1299
Score = 30.4 bits (67), Expect = 0.79
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 28/170 (16%)
Query: 29 RSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHP 88
R +R E + ++E +LR E+ +K + +++ QK +R++ + L
Sbjct: 852 REEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQEALRRLQQ 911
Query: 89 LRDA-------LPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQE 141
+ LP S AC ++ +E+ ++ + +QL EE R + +E
Sbjct: 912 QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSL-AEIQKLEEERERQLREEQRRQQRE 970
Query: 142 LL--------------------SSPAYRASTLVAIGQTLARQMQLEDGGQ 171
L+ S P+ +L+ I Q ARQMQ + Q
Sbjct: 971 LMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQ 1020
Score = 28.5 bits (62), Expect = 3.0
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 19 ALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRR 78
AL Q +L+ + + + K+E+ + +R++ L++ + L Q+ E +RR
Sbjct: 722 ALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRRE 781
Query: 79 ATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTR 138
+ +AL E RRQ E + L R+ +R+ EE R +
Sbjct: 782 EEELARRKQ--EEALRRQREQEIALRRQR-EEEERQQQEEALRRLEERRRE---EEERRK 835
Query: 139 FQELL 143
+ELL
Sbjct: 836 QEELL 840
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
Length = 1299
Score = 30.4 bits (67), Expect = 0.79
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 28/170 (16%)
Query: 29 RSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHP 88
R +R E + ++E +LR E+ +K + +++ QK +R++ + L
Sbjct: 852 REEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQEALRRLQQ 911
Query: 89 LRDA-------LPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQE 141
+ LP S AC ++ +E+ ++ + +QL EE R + +E
Sbjct: 912 QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSL-AEIQKLEEERERQLREEQRRQQRE 970
Query: 142 LL--------------------SSPAYRASTLVAIGQTLARQMQLEDGGQ 171
L+ S P+ +L+ I Q ARQMQ + Q
Sbjct: 971 LMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQ 1020
Score = 28.5 bits (62), Expect = 3.0
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 19 ALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRR 78
AL Q +L+ + + + K+E+ + +R++ L++ + L Q+ E +RR
Sbjct: 722 ALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRRE 781
Query: 79 ATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTR 138
+ +AL E RRQ E + L R+ +R+ EE R +
Sbjct: 782 EEELARRKQ--EEALRRQREQEIALRRQR-EEEERQQQEEALRRLEERRRE---EEERRK 835
Query: 139 FQELL 143
+ELL
Sbjct: 836 QEELL 840
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 30.4 bits (67), Expect = 0.79
Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 25 ELDVRSVTSIRRGAEAKTVLPKK---------EKMKLRREQCLQKIEAIKLAEQKHREER 75
E + + + ++RR EA+ + +K E++KL+RE+ L+K+ + ++ +EE+
Sbjct: 532 EKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEK 591
Query: 76 RRRATVVVGHLHPLRDALPELLGLEAGSRRQACSR-----ESNKPWPSELSRMSAAQRQQ 130
+++ + + E E ++++A ++ E+ + E R+ Q+
Sbjct: 592 KKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQ-- 649
Query: 131 LLEEGRTRFQELL 143
EE R QELL
Sbjct: 650 --EEEERRHQELL 660
Score = 28.5 bits (62), Expect = 3.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 47 KEKMKLRREQCLQKIEAIKLAEQKHREERRRR 78
KEK + R E +K EA +L QK E++RRR
Sbjct: 531 KEKERQRLENLRRKEEAEQLRRQKVEEDKRRR 562
Score = 28.1 bits (61), Expect = 3.9
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 34 IRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRA 79
+R+ AEAK + ++E+ + +E+ Q+ + EQ+ RE+ R+ A
Sbjct: 671 LRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLA 716
>gi|166795299 solute carrier family 2 (facilitated glucose
transporter), member 1 [Homo sapiens]
Length = 492
Score = 30.0 bits (66), Expect = 1.0
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 127 QRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQM 164
+ +Q++ E + EL SPAYR L+A+ L++Q+
Sbjct: 247 ESRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQL 284
>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 1 [Homo
sapiens]
Length = 1834
Score = 29.6 bits (65), Expect = 1.3
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 15 IDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREE 74
+D ++Q+LE + R+ T++ A +VL + + RR+Q L+++ + ++ +EE
Sbjct: 1587 VDTMLIMQRLEAERRARTAM----PAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEE 1642
Query: 75 RRRR 78
RRR
Sbjct: 1643 ERRR 1646
>gi|23397678 signal transducer and activator of transcription 6
[Homo sapiens]
Length = 847
Score = 29.6 bits (65), Expect = 1.3
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 30/172 (17%)
Query: 28 VRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERR-----RRATVV 82
+ ++ SI + K V ++ ++ ++ +++ + + +EE + RR
Sbjct: 81 ISTLESIYQRDPLKLVATFRQILQGEKKAVMEQFRHLPMPFHWKQEELKFKTGLRRLQHR 140
Query: 83 VGHLHPLRDALPELLGLEAG--SRRQACSRESNKPWPSE--------------------L 120
VG +H LR+AL + G EAG S +N PSE L
Sbjct: 141 VGEIHLLREALQK--GAEAGQVSLHSLIETPANGTGPSEALAMLLQETTGELEAAKALVL 198
Query: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 172
R+ +RQQ L F+E L+ R +LV I L +++ GG+L
Sbjct: 199 KRIQIWKRQQQLAGNGAPFEESLAPLQERCESLVDIYSQLQQEVGAA-GGEL 249
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 29.6 bits (65), Expect = 1.3
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 23 KLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVV 82
++E + ++ R EA+ ++E+M+ ++ ++ + IK E++ EER+R
Sbjct: 294 RIEAEEKAAAQERERREAE----ERERMREEEKRAAEERQRIKEEEKRAAEERQRIK--- 346
Query: 83 VGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQE 141
+ A E ++ +R A R+ + E +++ +R + LEE + QE
Sbjct: 347 ----EEEKRAAEERQRIKEEEKRAAEERQRARAEEEEKAKVEEQKRNKQLEEKKHAMQE 401
>gi|5174715 transcription factor-like 1 [Homo sapiens]
Length = 364
Score = 29.6 bits (65), Expect = 1.3
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 73 EERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL----SRMSAAQR 128
E RR+R V + PL+ P + AGS ++A RE P EL S + R
Sbjct: 77 EPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKA--REEKALLPLELQDDGSDSRKSMR 134
Query: 129 QQLLEEGRTRF 139
Q E R F
Sbjct: 135 QSTAEHTRQTF 145
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,930,278
Number of Sequences: 37866
Number of extensions: 237281
Number of successful extensions: 1506
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 1368
Number of HSP's gapped (non-prelim): 210
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.