Guide to the Human Genome
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Name: SLC2A1 Sequence: fasta or formatted (492aa) NCBI GI: 166795299
Description:

solute carrier family 2 (facilitated glucose transporter), member 1

Referenced in:

Kidney
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         34           2
 C cysteine            1.2          6           1
 D aspartate           1.4          7           1
 E glutamate           4.9         24           2
 F phenylalanine       7.7         38           2
 G glycine             9.3         46           2
 H histidine           1.0          5           1
 I isoleucine          7.5         37           2
 K lysine              3.3         16           2
 L leucine            12.0         59           3
 M methionine          3.5         17           2
 N asparagine          2.8         14           1
 P proline             4.7         23           1
 Q glutamine           4.3         21           2
 R arginine            4.3         21           2
 S serine              7.1         35           2
 T threonine           5.3         26           2
 V valine              8.9         44           2
 W tryptophan          1.2          6           1
 Y tyrosine            2.6         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 2 (facilitated glucose transp... 
SLC2A4                0.653   glucose transporter 4 
SLC2A3                0.647   solute carrier family 2 (facilitated glucose transpor...
SLC2A14               0.629   glucose transporter 14 
SLC2A2                0.546   solute carrier family 2 (facilitated glucose transpor...
SLC2A5                0.390   solute carrier family 2 (facilitated glucose/fructose...
SLC2A7                0.376   intestinal facilitative glucose transporter 7 [Homo...
SLC2A9                0.361   solute carrier family 2, member 9 protein isoform 2 ...
SLC2A9                0.361   solute carrier family 2, member 9 protein isoform 1 ...
SLC2A11               0.313   glucose transporter protein 10 isoform a 
SLC2A11               0.313   glucose transporter protein 10 isoform b 
SLC2A11               0.311   glucose transporter protein 10 isoform c 
SLC2A8                0.170   solute carrier family 2 (facilitated glucose transpo...
SLC2A5                0.151   solute carrier family 2 (facilitated glucose/fructo...
SLC2A6                0.143   solute carrier family 2 (facilitated glucose transp...
SLC2A13               0.133   solute carrier family 2 (facilitated glucose transp...
SLC2A6                0.133   solute carrier family 2 (facilitated glucose transp...
SLC2A12               0.106   solute carrier family 2 (facilitated glucose transpo...
SLC2A10               0.078   solute carrier family 2 member 10 
SLC22A4               0.047   solute carrier family 22 member 4 
SLC22A3               0.042   solute carrier family 22 member 3 
SLC22A5               0.042   solute carrier family 22 member 5 
SLC22A7               0.041   solute carrier family 22 member 7 isoform a 
SLC22A1               0.038   solute carrier family 22 member 1 isoform a 
SLC22A20              0.037   solute carrier family 22, member 20 
SLC22A7               0.037   solute carrier family 22 member 7 isoform b 
SLC22A1               0.037   solute carrier family 22 member 1 isoform b 
SLC22A2               0.035   solute carrier family 22 member 2 
SLC22A15              0.031   solute carrier family 22, member 15 
SLC22A8               0.031   solute carrier family 22 member 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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