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Search of human proteins with 239752186
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752186 PREDICTED: hypothetical protein [Homo sapiens]
(180 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757701 PREDICTED: hypothetical protein XP_002345525 [Homo ... 366 e-102
gi|239752186 PREDICTED: hypothetical protein [Homo sapiens] 366 e-102
gi|239746709 PREDICTED: hypothetical protein XP_002343816 [Homo ... 366 e-102
gi|239757232 PREDICTED: hypothetical protein [Homo sapiens] 43 1e-04
gi|239751740 PREDICTED: hypothetical protein [Homo sapiens] 43 1e-04
gi|239746241 PREDICTED: hypothetical protein XP_002343712 [Homo ... 43 1e-04
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 39 0.002
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens] 37 0.012
gi|150170670 piccolo isoform 2 [Homo sapiens] 37 0.012
gi|150378539 piccolo isoform 1 [Homo sapiens] 37 0.012
gi|239751430 PREDICTED: hypothetical protein [Homo sapiens] 36 0.020
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 36 0.020
gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo ... 36 0.020
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 35 0.045
gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo... 35 0.045
gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo... 35 0.045
gi|239753493 PREDICTED: hypothetical protein [Homo sapiens] 34 0.077
gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo ... 34 0.077
gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo ... 34 0.077
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 34 0.077
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 34 0.077
gi|45387951 transmembrane protein 108 [Homo sapiens] 34 0.077
gi|210147493 transmembrane protein 108 [Homo sapiens] 34 0.077
gi|15055549 fibroblast growth factor 5 isoform 2 precursor [Homo... 33 0.10
gi|73486655 fibroblast growth factor 5 isoform 1 precursor [Homo... 33 0.10
gi|4502175 apical protein of Xenopus-like [Homo sapiens] 33 0.10
gi|154937380 hypothetical protein LOC642475 [Homo sapiens] 33 0.10
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 32 0.23
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 32 0.23
>gi|239757701 PREDICTED: hypothetical protein XP_002345525 [Homo
sapiens]
Length = 180
Score = 366 bits (939), Expect = e-102
Identities = 180/180 (100%), Positives = 180/180 (100%)
Query: 1 MACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCG 60
MACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCG
Sbjct: 1 MACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCG 60
Query: 61 PTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNF 120
PTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNF
Sbjct: 61 PTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNF 120
Query: 121 SQKSFTLRPKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDSPFSISGAIQ 180
SQKSFTLRPKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDSPFSISGAIQ
Sbjct: 121 SQKSFTLRPKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDSPFSISGAIQ 180
>gi|239752186 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 366 bits (939), Expect = e-102
Identities = 180/180 (100%), Positives = 180/180 (100%)
Query: 1 MACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCG 60
MACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCG
Sbjct: 1 MACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCG 60
Query: 61 PTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNF 120
PTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNF
Sbjct: 61 PTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNF 120
Query: 121 SQKSFTLRPKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDSPFSISGAIQ 180
SQKSFTLRPKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDSPFSISGAIQ
Sbjct: 121 SQKSFTLRPKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDSPFSISGAIQ 180
>gi|239746709 PREDICTED: hypothetical protein XP_002343816 [Homo
sapiens]
Length = 180
Score = 366 bits (939), Expect = e-102
Identities = 180/180 (100%), Positives = 180/180 (100%)
Query: 1 MACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCG 60
MACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCG
Sbjct: 1 MACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCG 60
Query: 61 PTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNF 120
PTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNF
Sbjct: 61 PTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNF 120
Query: 121 SQKSFTLRPKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDSPFSISGAIQ 180
SQKSFTLRPKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDSPFSISGAIQ
Sbjct: 121 SQKSFTLRPKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDSPFSISGAIQ 180
>gi|239757232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 461
Score = 43.1 bits (100), Expect = 1e-04
Identities = 47/163 (28%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 23 GMGHRGAMLAVEHPPAGGWARA-REVSPGSGRTACSQCGPTPPALQAAGCPAPPGTGRGP 81
G RG+ A P+ WA R++ G GP PP L AA + G G GP
Sbjct: 313 GKSPRGSQTARSSSPSRAWAPGWRQLGRGPATPMLHGLGPVPPPLWAAVSASRWGGG-GP 371
Query: 82 QRSPPISRMLDTNLLSGSSLQQM-----------AASGKKAGGQSVGTNFSQKS--FTLR 128
Q P +S+ GS L + AA A G+ +G ++++ LR
Sbjct: 372 QPLPQVSK-------EGSGLARPDPSCCVRAGLGAAKTPGAQGERLGPRGTRRARGLQLR 424
Query: 129 PKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDS 171
P R++ A + P CR AAS L GLQD+
Sbjct: 425 PVGGQSRREAAPACSGPQPCRPHGTGAASSL-------GLQDA 460
>gi|239751740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 461
Score = 43.1 bits (100), Expect = 1e-04
Identities = 47/163 (28%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 23 GMGHRGAMLAVEHPPAGGWARA-REVSPGSGRTACSQCGPTPPALQAAGCPAPPGTGRGP 81
G RG+ A P+ WA R++ G GP PP L AA + G G GP
Sbjct: 313 GKSPRGSQTARSSSPSRAWAPGWRQLGRGPATPMLHGLGPVPPPLWAAVSASRWGGG-GP 371
Query: 82 QRSPPISRMLDTNLLSGSSLQQM-----------AASGKKAGGQSVGTNFSQKS--FTLR 128
Q P +S+ GS L + AA A G+ +G ++++ LR
Sbjct: 372 QPLPQVSK-------EGSGLARPDPSCCVRAGLGAAKTPGAQGERLGPRGTRRARGLQLR 424
Query: 129 PKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDS 171
P R++ A + P CR AAS L GLQD+
Sbjct: 425 PVGGQSRREAAPACSGPQPCRPHGTGAASSL-------GLQDA 460
>gi|239746241 PREDICTED: hypothetical protein XP_002343712 [Homo
sapiens]
Length = 461
Score = 43.1 bits (100), Expect = 1e-04
Identities = 47/163 (28%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 23 GMGHRGAMLAVEHPPAGGWARA-REVSPGSGRTACSQCGPTPPALQAAGCPAPPGTGRGP 81
G RG+ A P+ WA R++ G GP PP L AA + G G GP
Sbjct: 313 GKSPRGSQTARSSSPSRAWAPGWRQLGRGPATPMLHGLGPVPPPLWAAVSASRWGGG-GP 371
Query: 82 QRSPPISRMLDTNLLSGSSLQQM-----------AASGKKAGGQSVGTNFSQKS--FTLR 128
Q P +S+ GS L + AA A G+ +G ++++ LR
Sbjct: 372 QPLPQVSK-------EGSGLARPDPSCCVRAGLGAAKTPGAQGERLGPRGTRRARGLQLR 424
Query: 129 PKSSVRGRQSGSAYTCPMICRGSDARAASVLPLRVSPPGLQDS 171
P R++ A + P CR AAS L GLQD+
Sbjct: 425 PVGGQSRREAAPACSGPQPCRPHGTGAASSL-------GLQDA 460
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 38.9 bits (89), Expect = 0.002
Identities = 42/139 (30%), Positives = 54/139 (38%), Gaps = 17/139 (12%)
Query: 18 ALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSG-RTACSQCGPTPPALQAAGCPAPPG 76
AL AG H P G ARA VSP + R+ P+P A C
Sbjct: 92 ALTPAGPYHSA------RPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRA 145
Query: 77 TGR---GPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNFSQKSFTLRPKSSV 133
R G + SPP+ R L Q +G+ AGG V + + LRP+
Sbjct: 146 GLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARV----THRPGRLRPRGRG 201
Query: 134 RGRQSGSAYTCPMICRGSD 152
RGR + TCP RG +
Sbjct: 202 RGR---ARRTCPARRRGEE 217
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 38.9 bits (89), Expect = 0.002
Identities = 42/139 (30%), Positives = 54/139 (38%), Gaps = 17/139 (12%)
Query: 18 ALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSG-RTACSQCGPTPPALQAAGCPAPPG 76
AL AG H P G ARA VSP + R+ P+P A C
Sbjct: 92 ALTPAGPYHSA------RPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRA 145
Query: 77 TGR---GPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNFSQKSFTLRPKSSV 133
R G + SPP+ R L Q +G+ AGG V + + LRP+
Sbjct: 146 GLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARV----THRPGRLRPRGRG 201
Query: 134 RGRQSGSAYTCPMICRGSD 152
RGR + TCP RG +
Sbjct: 202 RGR---ARRTCPARRRGEE 217
>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
Length = 547
Score = 36.6 bits (83), Expect = 0.012
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 15/122 (12%)
Query: 27 RGAMLAVEHPPAGGWARAREVSPGSGRT-ACSQCGPTPPALQAAGCPAPPGTGRGPQRSP 85
RG+ + PP A + PG G S PTPPA A AP GR P+RSP
Sbjct: 74 RGSQHSPTRPPVAAAAASLGSLPGPGAARGPSPSSPTPPAAAAPAEQAPRAKGR-PRRSP 132
Query: 86 PISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNFSQKSFTLRPKSSVRGRQSGSAYTCP 145
S ++ ++ +++ G V KS +R S++R S T P
Sbjct: 133 -------------ESHRRSSSPERRSPGSPVCRADKAKSQQVRTSSTIRRTSSLDTITGP 179
Query: 146 MI 147
+
Sbjct: 180 YL 181
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 36.6 bits (83), Expect = 0.012
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 37 PAGGWARAREVSPGSGRTACSQCGPTPPALQAAGCPAPPGTGRGPQRSPP 86
P G A++ PG +T+ Q GPT P Q G PP GP + PP
Sbjct: 444 PGPGKIPAQQAGPG--KTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPP 491
Score = 35.0 bits (79), Expect = 0.035
Identities = 37/134 (27%), Positives = 50/134 (37%), Gaps = 22/134 (16%)
Query: 49 PGSGRTACSQCGPTPPALQAAGCPAP----PGTGRGPQRSPPISRMLDTNLLSGSSLQQM 104
PG G+T Q GP P Q G P P PG + P ++P ++ G Q
Sbjct: 395 PGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGL-QSPAKAPGPTKTPVQQPGPGKIPAQQ 453
Query: 105 AASGKKAGGQSVGTNFSQKSFTLRPKSSVRG------RQSGSAYTCPMICRGSDARAASV 158
A GK + Q+ T +P S + G +Q G A P + A+ S
Sbjct: 454 AGPGKTSAQQTGPT---------KPPSQLPGPAKPPPQQPGPAKPPPQ--QPGSAKPPSQ 502
Query: 159 LPLRVSPPGLQDSP 172
P PP Q P
Sbjct: 503 QPGSTKPPPQQPGP 516
Score = 27.7 bits (60), Expect = 5.6
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 36 PPAGGWARAREVSPGSGRTACSQCGPTPPALQAAG----CPAPPGTGRGPQRSP 85
P G A+ PGS + Q G T P Q G P PG+ + P + P
Sbjct: 481 PQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQP 534
Score = 27.3 bits (59), Expect = 7.3
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 36 PPAGGWARAREVSPGSGRTACSQCGPTPPALQAAGCPAPPGTGRG 80
P G A+ PGS + Q GP P+ Q G PP G
Sbjct: 491 PQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPG 535
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 36.6 bits (83), Expect = 0.012
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 37 PAGGWARAREVSPGSGRTACSQCGPTPPALQAAGCPAPPGTGRGPQRSPP 86
P G A++ PG +T+ Q GPT P Q G PP GP + PP
Sbjct: 444 PGPGKIPAQQAGPG--KTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPP 491
Score = 35.0 bits (79), Expect = 0.035
Identities = 37/134 (27%), Positives = 50/134 (37%), Gaps = 22/134 (16%)
Query: 49 PGSGRTACSQCGPTPPALQAAGCPAP----PGTGRGPQRSPPISRMLDTNLLSGSSLQQM 104
PG G+T Q GP P Q G P P PG + P ++P ++ G Q
Sbjct: 395 PGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGL-QSPAKAPGPTKTPVQQPGPGKIPAQQ 453
Query: 105 AASGKKAGGQSVGTNFSQKSFTLRPKSSVRG------RQSGSAYTCPMICRGSDARAASV 158
A GK + Q+ T +P S + G +Q G A P + A+ S
Sbjct: 454 AGPGKTSAQQTGPT---------KPPSQLPGPAKPPPQQPGPAKPPPQ--QPGSAKPPSQ 502
Query: 159 LPLRVSPPGLQDSP 172
P PP Q P
Sbjct: 503 QPGSTKPPPQQPGP 516
Score = 27.7 bits (60), Expect = 5.6
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 36 PPAGGWARAREVSPGSGRTACSQCGPTPPALQAAG----CPAPPGTGRGPQRSP 85
P G A+ PGS + Q G T P Q G P PG+ + P + P
Sbjct: 481 PQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQP 534
Score = 27.3 bits (59), Expect = 7.3
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 36 PPAGGWARAREVSPGSGRTACSQCGPTPPALQAAGCPAPPGTGRG 80
P G A+ PGS + Q GP P+ Q G PP G
Sbjct: 491 PQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPG 535
>gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 35.8 bits (81), Expect = 0.020
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 16/118 (13%)
Query: 1 MACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCG 60
++C+A + A A +AG RG G WAR V SGR G
Sbjct: 183 VSCAADEPGTERSGAAAARGSAGASSRG------RGALGAWARHSAVRLDSGR---GWRG 233
Query: 61 PTPPA-------LQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKA 111
TP A Q A CPA G R P +LL S L ++ GK A
Sbjct: 234 KTPGAGGAAERGAQLAKCPASKAFGDQSLRGPLAGAQSRPDLLPASPLSRLGEEGKGA 291
Score = 29.3 bits (64), Expect = 1.9
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 41 WARAREVSPGSGRTACSQCGPTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSS 100
WA A V+ G GR+A + P A CPA P + GP+R +S D G+
Sbjct: 143 WAAAA-VAAGPGRSAPQR----EPRAAWAACPAGPSSAAGPERG-HVSCAADE---PGTE 193
Query: 101 LQQMAASGKKAGGQSVG 117
AA+ AG S G
Sbjct: 194 RSGAAAARGSAGASSRG 210
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 35.8 bits (81), Expect = 0.020
Identities = 45/154 (29%), Positives = 57/154 (37%), Gaps = 22/154 (14%)
Query: 18 ALLTAGMGHRGAMLAVEHPPAG------------GWARAREVSPG-SGRTACSQCGPTPP 64
AL+ AG+ A HPPA A+ R SPG G P PP
Sbjct: 39 ALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPP 98
Query: 65 ALQAAGCPA-PPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNFSQK 123
ALQ G PA P GP + P S +L SG + S A + Q
Sbjct: 99 ALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLPQG 158
Query: 124 SFTL-----RPKSSVRGRQSGSAYTCPMICRGSD 152
S T RP+S R++G+ + GSD
Sbjct: 159 SVTAREQEQRPRSR---RRAGAPEALGPVHAGSD 189
>gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo
sapiens]
Length = 303
Score = 35.8 bits (81), Expect = 0.020
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 16/118 (13%)
Query: 1 MACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCG 60
++C+A + A A +AG RG G WAR V SGR G
Sbjct: 183 VSCAADEPGTERSGAAAARGSAGASSRG------RGALGAWARHSAVRLDSGR---GWRG 233
Query: 61 PTPPA-------LQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKA 111
TP A Q A CPA G R P +LL S L ++ GK A
Sbjct: 234 KTPGAGGAAERGAQLAKCPASKAFGDQSLRGPLAGAQSRPDLLPASPLSRLGEEGKGA 291
Score = 29.3 bits (64), Expect = 1.9
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 41 WARAREVSPGSGRTACSQCGPTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSS 100
WA A V+ G GR+A + P A CPA P + GP+R +S D G+
Sbjct: 143 WAAAA-VAAGPGRSAPQR----EPRAAWAACPAGPSSAAGPERG-HVSCAADE---PGTE 193
Query: 101 LQQMAASGKKAGGQSVG 117
AA+ AG S G
Sbjct: 194 RSGAAAARGSAGASSRG 210
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 34.7 bits (78), Expect = 0.045
Identities = 38/125 (30%), Positives = 45/125 (36%), Gaps = 14/125 (11%)
Query: 18 ALLTAGMGHRGAMLAVEHPPAG------------GWARAREVSPG-SGRTACSQCGPTPP 64
AL+ AG+ A HPPA A+ R SPG G P PP
Sbjct: 39 ALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPP 98
Query: 65 ALQAAGCPA-PPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNFSQK 123
ALQ G PA P GP + P S +L SG + S A + Q
Sbjct: 99 ALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLPQG 158
Query: 124 SFTLR 128
S T R
Sbjct: 159 SVTAR 163
>gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo
sapiens]
Length = 1447
Score = 34.7 bits (78), Expect = 0.045
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 61 PTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAG--GQSVGT 118
P P Q P+ PG+G R P++R++D +L++GS A G+ G G G
Sbjct: 1357 PPPSTPQEVPGPSRPGSGTHGSRDLPVNRIIDVDLVTGS------APGRDGGIAGAQAGP 1410
Query: 119 NFSQKS 124
SQ S
Sbjct: 1411 GRSQAS 1416
>gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo
sapiens]
Length = 799
Score = 34.7 bits (78), Expect = 0.045
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 61 PTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAG--GQSVGT 118
P P Q P+ PG+G R P++R++D +L++GS A G+ G G G
Sbjct: 709 PPPSTPQEVPGPSRPGSGTHGSRDLPVNRIIDVDLVTGS------APGRDGGIAGAQAGP 762
Query: 119 NFSQKS 124
SQ S
Sbjct: 763 GRSQAS 768
>gi|239753493 PREDICTED: hypothetical protein [Homo sapiens]
Length = 254
Score = 33.9 bits (76), Expect = 0.077
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 15/79 (18%)
Query: 37 PAGGWARAREVSPGSGRTACSQCGPTPPALQAAG-----CPA-PPGT---GRGPQRSPPI 87
PAGG A PG QC P PP +A CPA PP + G RSPP+
Sbjct: 182 PAGGRA------PGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPL 235
Query: 88 SRMLDTNLLSGSSLQQMAA 106
T + +LQQ A
Sbjct: 236 RLQRYTTAAAAPALQQRRA 254
>gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo
sapiens]
Length = 254
Score = 33.9 bits (76), Expect = 0.077
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 15/79 (18%)
Query: 37 PAGGWARAREVSPGSGRTACSQCGPTPPALQAAG-----CPA-PPGT---GRGPQRSPPI 87
PAGG A PG QC P PP +A CPA PP + G RSPP+
Sbjct: 182 PAGGRA------PGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPL 235
Query: 88 SRMLDTNLLSGSSLQQMAA 106
T + +LQQ A
Sbjct: 236 RLQRYTTAAAAPALQQRRA 254
>gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo
sapiens]
Length = 254
Score = 33.9 bits (76), Expect = 0.077
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 15/79 (18%)
Query: 37 PAGGWARAREVSPGSGRTACSQCGPTPPALQAAG-----CPA-PPGT---GRGPQRSPPI 87
PAGG A PG QC P PP +A CPA PP + G RSPP+
Sbjct: 182 PAGGRA------PGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPL 235
Query: 88 SRMLDTNLLSGSSLQQMAA 106
T + +LQQ A
Sbjct: 236 RLQRYTTAAAAPALQQRRA 254
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 33.9 bits (76), Expect = 0.077
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 9/43 (20%)
Query: 49 PGSGRTACSQCGPTPPALQAAGCPAP-----PGTGRGPQRSPP 86
PGS C P PP L GCP P PG G GP PP
Sbjct: 481 PGS----CEFLPPPPPPLPGLGCPPPPPPLLPGMGWGPPPPPP 519
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 33.9 bits (76), Expect = 0.077
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 9/43 (20%)
Query: 49 PGSGRTACSQCGPTPPALQAAGCPAP-----PGTGRGPQRSPP 86
PGS C P PP L GCP P PG G GP PP
Sbjct: 481 PGS----CEFLPPPPPPLPGLGCPPPPPPLLPGMGWGPPPPPP 519
>gi|45387951 transmembrane protein 108 [Homo sapiens]
Length = 575
Score = 33.9 bits (76), Expect = 0.077
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 8 HSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCGPTPPALQ 67
+S++PQ A T A PA R + G G T SQ G TP A
Sbjct: 244 YSSSPQPQTVAATTVPSNTSWAPTTTSLGPAKDKPGLRRAAQGGGSTFTSQ-GGTPDATA 302
Query: 68 AAGCPAPPGTGRGPQRSP 85
A+G P P P + P
Sbjct: 303 ASGAPVSPQAAPVPSQRP 320
>gi|210147493 transmembrane protein 108 [Homo sapiens]
Length = 575
Score = 33.9 bits (76), Expect = 0.077
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 8 HSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCGPTPPALQ 67
+S++PQ A T A PA R + G G T SQ G TP A
Sbjct: 244 YSSSPQPQTVAATTVPSNTSWAPTTTSLGPAKDKPGLRRAAQGGGSTFTSQ-GGTPDATA 302
Query: 68 AAGCPAPPGTGRGPQRSP 85
A+G P P P + P
Sbjct: 303 ASGAPVSPQAAPVPSQRP 320
>gi|15055549 fibroblast growth factor 5 isoform 2 precursor [Homo
sapiens]
Length = 123
Score = 33.5 bits (75), Expect = 0.10
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 66 LQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNFSQKSF 125
L G P P T R P+ S SR ++ +S SS A+S A S G+ Q SF
Sbjct: 26 LAPKGQPGPAATDRNPRGSS--SRQSSSSAMSSSS----ASSSPAASLGSQGSGLEQSSF 79
Query: 126 TLRPKSSVRGRQSGSAY 142
P GR++GS Y
Sbjct: 80 QWSPS----GRRTGSLY 92
>gi|73486655 fibroblast growth factor 5 isoform 1 precursor [Homo
sapiens]
Length = 268
Score = 33.5 bits (75), Expect = 0.10
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 66 LQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNFSQKSF 125
L G P P T R P+ S SR ++ +S SS A+S A S G+ Q SF
Sbjct: 26 LAPKGQPGPAATDRNPRGSS--SRQSSSSAMSSSS----ASSSPAASLGSQGSGLEQSSF 79
Query: 126 TLRPKSSVRGRQSGSAY 142
P GR++GS Y
Sbjct: 80 QWSPS----GRRTGSLY 92
>gi|4502175 apical protein of Xenopus-like [Homo sapiens]
Length = 1616
Score = 33.5 bits (75), Expect = 0.10
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
Query: 7 KHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTACSQCGPTPPAL 66
+ + +P E R L +A G + P A+ RE SPGS + SQ P PP
Sbjct: 938 RQAGDPGEPREELPSAVRAEEG-----QSTPRQADAQCREGSPGSQQHPPSQKAPNPPTF 992
Query: 67 ----QAAGCPAPPGTGRG 80
G P P GRG
Sbjct: 993 SELSHCRGAPELPREGRG 1010
>gi|154937380 hypothetical protein LOC642475 [Homo sapiens]
Length = 719
Score = 33.5 bits (75), Expect = 0.10
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 46 EVSPGSGRTACSQCGPTPPALQAAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMA 105
E PG G T + G P +L +A PAP G + PQ S + D L + + L++
Sbjct: 66 EAEPGRGATV-PEAGSEPCSLNSALEPAPEGPHQVPQSSWEEGVLADLALYTAACLEEAG 124
Query: 106 ASGKKAGGQSVGTNFSQKSFTLRPKSSVRGRQSGSAYTCPMICRGSDARAA 156
+G +A ++ + + L + V G P + G RAA
Sbjct: 125 FAGTQATVLTLSSALEARGERL--EDQVHALVRGLLAQVPSLAEGRPWRAA 173
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 32.3 bits (72), Expect = 0.23
Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 31/161 (19%)
Query: 9 SANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSPGSGRTAC-SQCGPTPPALQ 67
+A+ A L++ G A + P AG R E + S+ P P +LQ
Sbjct: 70 TASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQERPEEEGEDEAEASSGSEEEPAPSSLQ 129
Query: 68 AAGCPAPPGTGRGPQRSPPISRMLDTNLLSGSSLQQMAASGKKAGGQSVGTNFSQKSFTL 127
G PA PG GR R+ ++L G L+ A + + G+ V
Sbjct: 130 P-GSPASPGPGR---------RLCSLDVLRGVRLELAGARRRLSEGKLVS---------- 169
Query: 128 RPKSSVRGRQSGSAYT-CPMICRGSDARAASVLPLRVSPPG 167
RP++ + G + A + CP S A++ P SPPG
Sbjct: 170 RPRALLHGLRGHRALSLCP-----SPAQS----PRSASPPG 201
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 32.3 bits (72), Expect = 0.23
Identities = 29/85 (34%), Positives = 33/85 (38%), Gaps = 14/85 (16%)
Query: 18 ALLTAGMGHRGAMLAVEHPPAG------------GWARAREVSPG-SGRTACSQCGPTPP 64
AL+ AG+ A HPPA A+ R SPG G P PP
Sbjct: 39 ALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPP 98
Query: 65 ALQAAGCPA-PPGTGRGPQRSPPIS 88
ALQ G PA P GP + P S
Sbjct: 99 ALQPRGAPAVPAAPSPGPLPARPSS 123
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.127 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,852,737
Number of Sequences: 37866
Number of extensions: 493025
Number of successful extensions: 3031
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 303
Number of HSP's that attempted gapping in prelim test: 2777
Number of HSP's gapped (non-prelim): 600
length of query: 180
length of database: 18,247,518
effective HSP length: 96
effective length of query: 84
effective length of database: 14,612,382
effective search space: 1227440088
effective search space used: 1227440088
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.