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Search of human proteins with 239751934
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
sapiens]
(651 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens] 1330 0.0
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ... 1330 0.0
gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo ... 1046 0.0
gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso... 171 1e-42
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 164 2e-40
gi|94538337 signal-regulatory protein gamma isoform 2 precursor ... 164 3e-40
gi|18426911 signal-regulatory protein alpha precursor [Homo sapi... 159 8e-39
gi|91105767 signal-regulatory protein alpha precursor [Homo sapi... 159 8e-39
gi|91105764 signal-regulatory protein alpha precursor [Homo sapi... 159 8e-39
gi|94538339 signal-regulatory protein gamma isoform 3 precursor ... 157 4e-38
gi|94538335 signal-regulatory protein gamma isoform 1 precursor ... 157 4e-38
gi|169217521 PREDICTED: similar to signal-regulatory protein bet... 156 6e-38
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso... 154 3e-37
gi|239751927 PREDICTED: similar to signal-regulatory protein bet... 154 3e-37
gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo sa... 124 2e-28
gi|30425382 signal-regulatory protein delta [Homo sapiens] 94 4e-19
gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo sa... 80 6e-15
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 47 7e-05
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 47 7e-05
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 46 9e-05
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 46 9e-05
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 44 4e-04
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 44 4e-04
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 44 4e-04
gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens] 44 5e-04
gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens] 44 5e-04
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 44 6e-04
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 44 6e-04
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 44 6e-04
gi|157311649 neogenin homolog 1 [Homo sapiens] 42 0.001
>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
Length = 651
Score = 1330 bits (3442), Expect = 0.0
Identities = 651/651 (100%), Positives = 651/651 (100%)
Query: 1 MATTPGRALGSLLPTLLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDF 60
MATTPGRALGSLLPTLLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDF
Sbjct: 1 MATTPGRALGSLLPTLLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDF 60
Query: 61 NVTWLKDSDEHPASAQRLVPDNGGNDFITSKAWVTLTRQDVSSEITCEVTHRALAEPLKT 120
NVTWLKDSDEHPASAQRLVPDNGGNDFITSKAWVTLTRQDVSSEITCEVTHRALAEPLKT
Sbjct: 61 NVTWLKDSDEHPASAQRLVPDNGGNDFITSKAWVTLTRQDVSSEITCEVTHRALAEPLKT 120
Query: 121 TMNLSQATRNPDGTYSLEHTWQAEATLEEREFACWVVHDEQPPLKANVTLQAQVRRQGKG 180
TMNLSQATRNPDGTYSLEHTWQAEATLEEREFACWVVHDEQPPLKANVTLQAQVRRQGKG
Sbjct: 121 TMNLSQATRNPDGTYSLEHTWQAEATLEEREFACWVVHDEQPPLKANVTLQAQVRRQGKG 180
Query: 181 QSVQPYKLQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHTY 240
QSVQPYKLQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHTY
Sbjct: 181 QSVQPYKLQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHTY 240
Query: 241 NVTSSVLVPLMDDDVFSHVVCHVEHKLTWFFQKTTGLDQYLREPMTVVWRAPYPALFSTG 300
NVTSSVLVPLMDDDVFSHVVCHVEHKLTWFFQKTTGLDQYLREPMTVVWRAPYPALFSTG
Sbjct: 241 NVTSSVLVPLMDDDVFSHVVCHVEHKLTWFFQKTTGLDQYLREPMTVVWRAPYPALFSTG 300
Query: 301 TTPVTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKN 360
TTPVTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKN
Sbjct: 301 TTPVTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKN 360
Query: 361 NDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG 420
NDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG
Sbjct: 361 NDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG 420
Query: 421 EEELQVIQPEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANT 480
EEELQVIQPEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANT
Sbjct: 421 EEELQVIQPEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANT 480
Query: 481 GTYNCVKFWKGGPDMELKSGPGTELSVHRVAGEELQVIQPEAFVSVAAGEMATLNCTVTS 540
GTYNCVKFWKGGPDMELKSGPGTELSVHRVAGEELQVIQPEAFVSVAAGEMATLNCTVTS
Sbjct: 481 GTYNCVKFWKGGPDMELKSGPGTELSVHRVAGEELQVIQPEAFVSVAAGEMATLNCTVTS 540
Query: 541 LLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTY 600
LLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTY
Sbjct: 541 LLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTY 600
Query: 601 YCMKLRRAIPANVEIKSGPGTQMSVRGLLLGSKVLLLVDVSAAYVHRKQKA 651
YCMKLRRAIPANVEIKSGPGTQMSVRGLLLGSKVLLLVDVSAAYVHRKQKA
Sbjct: 601 YCMKLRRAIPANVEIKSGPGTQMSVRGLLLGSKVLLLVDVSAAYVHRKQKA 651
>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
sapiens]
Length = 651
Score = 1330 bits (3442), Expect = 0.0
Identities = 651/651 (100%), Positives = 651/651 (100%)
Query: 1 MATTPGRALGSLLPTLLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDF 60
MATTPGRALGSLLPTLLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDF
Sbjct: 1 MATTPGRALGSLLPTLLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDF 60
Query: 61 NVTWLKDSDEHPASAQRLVPDNGGNDFITSKAWVTLTRQDVSSEITCEVTHRALAEPLKT 120
NVTWLKDSDEHPASAQRLVPDNGGNDFITSKAWVTLTRQDVSSEITCEVTHRALAEPLKT
Sbjct: 61 NVTWLKDSDEHPASAQRLVPDNGGNDFITSKAWVTLTRQDVSSEITCEVTHRALAEPLKT 120
Query: 121 TMNLSQATRNPDGTYSLEHTWQAEATLEEREFACWVVHDEQPPLKANVTLQAQVRRQGKG 180
TMNLSQATRNPDGTYSLEHTWQAEATLEEREFACWVVHDEQPPLKANVTLQAQVRRQGKG
Sbjct: 121 TMNLSQATRNPDGTYSLEHTWQAEATLEEREFACWVVHDEQPPLKANVTLQAQVRRQGKG 180
Query: 181 QSVQPYKLQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHTY 240
QSVQPYKLQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHTY
Sbjct: 181 QSVQPYKLQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHTY 240
Query: 241 NVTSSVLVPLMDDDVFSHVVCHVEHKLTWFFQKTTGLDQYLREPMTVVWRAPYPALFSTG 300
NVTSSVLVPLMDDDVFSHVVCHVEHKLTWFFQKTTGLDQYLREPMTVVWRAPYPALFSTG
Sbjct: 241 NVTSSVLVPLMDDDVFSHVVCHVEHKLTWFFQKTTGLDQYLREPMTVVWRAPYPALFSTG 300
Query: 301 TTPVTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKN 360
TTPVTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKN
Sbjct: 301 TTPVTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKN 360
Query: 361 NDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG 420
NDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG
Sbjct: 361 NDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG 420
Query: 421 EEELQVIQPEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANT 480
EEELQVIQPEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANT
Sbjct: 421 EEELQVIQPEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANT 480
Query: 481 GTYNCVKFWKGGPDMELKSGPGTELSVHRVAGEELQVIQPEAFVSVAAGEMATLNCTVTS 540
GTYNCVKFWKGGPDMELKSGPGTELSVHRVAGEELQVIQPEAFVSVAAGEMATLNCTVTS
Sbjct: 481 GTYNCVKFWKGGPDMELKSGPGTELSVHRVAGEELQVIQPEAFVSVAAGEMATLNCTVTS 540
Query: 541 LLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTY 600
LLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTY
Sbjct: 541 LLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTY 600
Query: 601 YCMKLRRAIPANVEIKSGPGTQMSVRGLLLGSKVLLLVDVSAAYVHRKQKA 651
YCMKLRRAIPANVEIKSGPGTQMSVRGLLLGSKVLLLVDVSAAYVHRKQKA
Sbjct: 601 YCMKLRRAIPANVEIKSGPGTQMSVRGLLLGSKVLLLVDVSAAYVHRKQKA 651
>gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo
sapiens]
Length = 532
Score = 1046 bits (2706), Expect = 0.0
Identities = 506/508 (99%), Positives = 508/508 (100%)
Query: 1 MATTPGRALGSLLPTLLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDF 60
MATTPGRALGSLLPTLLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDF
Sbjct: 1 MATTPGRALGSLLPTLLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDF 60
Query: 61 NVTWLKDSDEHPASAQRLVPDNGGNDFITSKAWVTLTRQDVSSEITCEVTHRALAEPLKT 120
NVTWLKDSDEHPASAQRLVPDNGGNDFITSKAWVTLTRQDVSSEITCEVTHRALAEPLKT
Sbjct: 61 NVTWLKDSDEHPASAQRLVPDNGGNDFITSKAWVTLTRQDVSSEITCEVTHRALAEPLKT 120
Query: 121 TMNLSQATRNPDGTYSLEHTWQAEATLEEREFACWVVHDEQPPLKANVTLQAQVRRQGKG 180
TMNLSQATRNPDGTYSLEHTWQAEATLEEREFACWVVHDEQPPLKANVTLQAQVRRQGKG
Sbjct: 121 TMNLSQATRNPDGTYSLEHTWQAEATLEEREFACWVVHDEQPPLKANVTLQAQVRRQGKG 180
Query: 181 QSVQPYKLQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHTY 240
QSVQPYKLQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHTY
Sbjct: 181 QSVQPYKLQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHTY 240
Query: 241 NVTSSVLVPLMDDDVFSHVVCHVEHKLTWFFQKTTGLDQYLREPMTVVWRAPYPALFSTG 300
NVTSSVLVPLMDDDVFSHVVCHVEHKLTWFFQKTTGLDQYL+EPMTVVWRAPYPALFSTG
Sbjct: 241 NVTSSVLVPLMDDDVFSHVVCHVEHKLTWFFQKTTGLDQYLQEPMTVVWRAPYPALFSTG 300
Query: 301 TTPVTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKN 360
TTPVTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKN
Sbjct: 301 TTPVTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKN 360
Query: 361 NDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG 420
NDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG
Sbjct: 361 NDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG 420
Query: 421 EEELQVIQPEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANT 480
EEEL+VIQPEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANT
Sbjct: 421 EEELRVIQPEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANT 480
Query: 481 GTYNCVKFWKGGPDMELKSGPGTELSVH 508
GTYNCVKFWKGGPDMELKSGPGTELSVH
Sbjct: 481 GTYNCVKFWKGGPDMELKSGPGTELSVH 508
Score = 84.3 bits (207), Expect = 3e-16
Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 544 VGPIQWFRGACPGQKLIYSPKRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCM 603
+ P +WF+G GQ+LIYS K H P++ ISD KRN+TD+S+ I+SIT + GTY C+
Sbjct: 427 IQPEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCV 486
Query: 604 KLRRAIPANVEIKSGPGTQMSV 625
K + P ++E+KSGPGT++SV
Sbjct: 487 KFWKGGP-DMELKSGPGTELSV 507
>gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor
[Homo sapiens]
Length = 181
Score = 171 bits (434), Expect = 1e-42
Identities = 94/155 (60%), Positives = 112/155 (72%), Gaps = 13/155 (8%)
Query: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
VAGE ELQVIQPE VSVAAGE ATL C +TSL+PVGPI WFRGA G++LIY+ K H
Sbjct: 27 VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 86
Query: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR-- 626
PRVTT+S+ KRN+ D+SI IS+IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 87 PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVREA 146
Query: 627 ----------GLLLGSKVLLLVDVSAAYVHRKQKA 651
LLLG K+LL+V VSA Y+ KQKA
Sbjct: 147 ALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 181
Score = 117 bits (292), Expect = 4e-26
Identities = 62/123 (50%), Positives = 76/123 (61%), Gaps = 27/123 (21%)
Query: 416 TGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
TG AGE+ELQVIQPEK WF+G G+ELIY+ K G
Sbjct: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
Query: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSVH 508
HFP++ +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
Query: 509 RVA 511
A
Sbjct: 145 EAA 147
>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
[Homo sapiens]
Length = 398
Score = 164 bits (416), Expect = 2e-40
Identities = 82/118 (69%), Positives = 98/118 (83%), Gaps = 1/118 (0%)
Query: 510 VAGEE-LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
VAGEE LQVIQP+ +SVAAGE ATL+CTVTSL+PVGPIQWFRGA PG++LIY+ K H
Sbjct: 27 VAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGHF 86
Query: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626
PRVTT+SD KRN+ D+SIRIS+IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 87 PRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVR 144
Score = 115 bits (289), Expect = 1e-25
Identities = 62/119 (52%), Positives = 75/119 (63%), Gaps = 27/119 (22%)
Query: 416 TGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
TG AGEEELQVIQP+K WF+G G+ELIY+ K G
Sbjct: 25 TGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEG 84
Query: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPD-MELKSGPGTELSV 507
HFP++ +SD+TKRNN DFS+ I++IT A+ GTY CVKF KG PD +E KSG GTELSV
Sbjct: 85 HFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSV 143
Score = 107 bits (267), Expect = 3e-23
Identities = 77/237 (32%), Positives = 109/237 (45%), Gaps = 30/237 (12%)
Query: 188 LQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGH--TYNVTSS 245
+ GP R+ P + T S GFS +T+ W KN +EL + QT+V +G +Y++ S+
Sbjct: 152 VSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHST 211
Query: 246 VLVPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLREPMTVVWRAPYPALFSTGTTP 303
V L +DV S V+C V H + T L + +R P T+ T
Sbjct: 212 AKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTL-----------EVTQQ 260
Query: 304 VTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDR 363
RA V VTC V++FYPQ + L WLE+ + + TL +N D
Sbjct: 261 PVRAENQ-------------VNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDG 307
Query: 364 SYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG 420
+Y LLVN S + LTC +EH+GQP + L +AH K GS A G
Sbjct: 308 TYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHP--KEQGSNTAPG 362
Score = 60.1 bits (144), Expect = 6e-09
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 29 LTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASAQRLVPDNGGNDF- 87
++GP+ R +P +V F C + F+ RD + W K+ +E + P +
Sbjct: 152 VSGPAARATPQHTVSFTCESHGFSP----RDITLKWFKNGNELSDFQTNVDPAGDSVSYS 207
Query: 88 ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDGTYSLEHTWQAEAT 146
I S A V LTR+DV S++ CEV H L +PL+ T NLS+ R P +LE T Q
Sbjct: 208 IHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPP---TLEVTQQPVRA 264
Query: 147 LEEREFACWV 156
+ C V
Sbjct: 265 ENQVNVTCQV 274
Score = 31.6 bits (70), Expect = 2.4
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 629 LLGSKVLLLVDVSAAYVHRKQKA 651
LLG KVLL+V VS YV+ KQKA
Sbjct: 376 LLGPKVLLVVGVSVIYVYWKQKA 398
>gi|94538337 signal-regulatory protein gamma isoform 2 precursor
[Homo sapiens]
Length = 170
Score = 164 bits (414), Expect = 3e-40
Identities = 87/149 (58%), Positives = 105/149 (70%), Gaps = 3/149 (2%)
Query: 505 LSVHRVAGEE-LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSP 563
L + VAGEE LQ+IQPE + V G+ ATL+CTVTSLLPVGP+ WFRG PG++LIY+
Sbjct: 21 LGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQ 80
Query: 564 KRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQM 623
K H PRVTT+SD KRN+ D+SIRISSIT D GTYYC+K R+ P NVE KSGPGT+M
Sbjct: 81 KEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM 140
Query: 624 SVRGLLLGSKVLLLVDV--SAAYVHRKQK 650
++ G LLL+ V YV KQK
Sbjct: 141 ALGGPASSLTALLLIAVLLGPIYVPWKQK 169
Score = 114 bits (286), Expect = 2e-25
Identities = 60/122 (49%), Positives = 77/122 (63%), Gaps = 27/122 (22%)
Query: 413 IGSTGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSS 446
+G T AGEEELQ+IQPEK WF+G G+ELIY+
Sbjct: 21 LGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQ 80
Query: 447 KGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPD-MELKSGPGTEL 505
K GHFP++ +SD+TKRNN DFS+ I+SIT A+ GTY CVKF KG P+ +E KSGPGTE+
Sbjct: 81 KEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM 140
Query: 506 SV 507
++
Sbjct: 141 AL 142
>gi|18426911 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 159 bits (402), Expect = 8e-39
Identities = 80/118 (67%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 510 VAGEE-LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
VAGEE LQVIQP+ V VAAGE ATL CT TSL+PVGPIQWFRGA PG++LIY+ K H
Sbjct: 28 VAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEGHF 87
Query: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626
PRVTT+SD KRN+ D+SIRI +IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 88 PRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Score = 115 bits (289), Expect = 1e-25
Identities = 71/149 (47%), Positives = 85/149 (57%), Gaps = 34/149 (22%)
Query: 388 MEHEGQPPKRAN--LVLSTAAHTAYKPIGSTGAAGEEELQVIQPEK-------------- 431
ME G P R L L AA A+ +G AGEEELQVIQP+K
Sbjct: 1 MEPAGPAPGRLGPLLCLLLAASCAW-----SGVAGEEELQVIQPDKSVLVAAGETATLRC 55
Query: 432 ------------WFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRAN 479
WF+G G+ELIY+ K GHFP++ +SD+TKRNN DFS+ I +IT A+
Sbjct: 56 TATSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPAD 115
Query: 480 TGTYNCVKFWKGGP-DMELKSGPGTELSV 507
GTY CVKF KG P D+E KSG GTELSV
Sbjct: 116 AGTYYCVKFRKGSPDDVEFKSGAGTELSV 144
Score = 105 bits (261), Expect = 2e-22
Identities = 76/236 (32%), Positives = 108/236 (45%), Gaps = 30/236 (12%)
Query: 188 LQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGH--TYNVTSS 245
+ GP R+ P + T S GFS +T+ W KN +EL + QT+V G +Y++ S+
Sbjct: 153 VSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHST 212
Query: 246 VLVPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLREPMTVVWRAPYPALFSTGTTP 303
V L +DV S V+C V H + T L + +R P T+ T
Sbjct: 213 AKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTL-----------EVTQQ 261
Query: 304 VTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDR 363
RA V VTC V++FYPQ + L WLE+ + + T+ +N D
Sbjct: 262 PVRAENQ-------------VNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDG 308
Query: 364 SYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAA 419
+Y LLVN S + LTC +EH+GQP + L +AH K GS AA
Sbjct: 309 TYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHP--KEQGSNTAA 362
Score = 59.3 bits (142), Expect = 1e-08
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 29 LTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASAQRLVPDNGGNDF- 87
++GP+ R +P +V F C + F+ RD + W K+ +E + P +
Sbjct: 153 VSGPAARATPQHTVSFTCESHGFSP----RDITLKWFKNGNELSDFQTNVDPVGESVSYS 208
Query: 88 ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDGTYSLEHTWQAEAT 146
I S A V LTR+DV S++ CEV H L +PL+ T NLS+ R P +LE T Q
Sbjct: 209 IHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPP---TLEVTQQPVRA 265
Query: 147 LEEREFACWV 156
+ C V
Sbjct: 266 ENQVNVTCQV 275
>gi|91105767 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 159 bits (402), Expect = 8e-39
Identities = 80/118 (67%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 510 VAGEE-LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
VAGEE LQVIQP+ V VAAGE ATL CT TSL+PVGPIQWFRGA PG++LIY+ K H
Sbjct: 28 VAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEGHF 87
Query: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626
PRVTT+SD KRN+ D+SIRI +IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 88 PRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Score = 115 bits (289), Expect = 1e-25
Identities = 71/149 (47%), Positives = 85/149 (57%), Gaps = 34/149 (22%)
Query: 388 MEHEGQPPKRAN--LVLSTAAHTAYKPIGSTGAAGEEELQVIQPEK-------------- 431
ME G P R L L AA A+ +G AGEEELQVIQP+K
Sbjct: 1 MEPAGPAPGRLGPLLCLLLAASCAW-----SGVAGEEELQVIQPDKSVLVAAGETATLRC 55
Query: 432 ------------WFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRAN 479
WF+G G+ELIY+ K GHFP++ +SD+TKRNN DFS+ I +IT A+
Sbjct: 56 TATSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPAD 115
Query: 480 TGTYNCVKFWKGGP-DMELKSGPGTELSV 507
GTY CVKF KG P D+E KSG GTELSV
Sbjct: 116 AGTYYCVKFRKGSPDDVEFKSGAGTELSV 144
Score = 105 bits (261), Expect = 2e-22
Identities = 76/236 (32%), Positives = 108/236 (45%), Gaps = 30/236 (12%)
Query: 188 LQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGH--TYNVTSS 245
+ GP R+ P + T S GFS +T+ W KN +EL + QT+V G +Y++ S+
Sbjct: 153 VSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHST 212
Query: 246 VLVPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLREPMTVVWRAPYPALFSTGTTP 303
V L +DV S V+C V H + T L + +R P T+ T
Sbjct: 213 AKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTL-----------EVTQQ 261
Query: 304 VTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDR 363
RA V VTC V++FYPQ + L WLE+ + + T+ +N D
Sbjct: 262 PVRAENQ-------------VNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDG 308
Query: 364 SYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAA 419
+Y LLVN S + LTC +EH+GQP + L +AH K GS AA
Sbjct: 309 TYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHP--KEQGSNTAA 362
Score = 59.3 bits (142), Expect = 1e-08
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 29 LTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASAQRLVPDNGGNDF- 87
++GP+ R +P +V F C + F+ RD + W K+ +E + P +
Sbjct: 153 VSGPAARATPQHTVSFTCESHGFSP----RDITLKWFKNGNELSDFQTNVDPVGESVSYS 208
Query: 88 ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDGTYSLEHTWQAEAT 146
I S A V LTR+DV S++ CEV H L +PL+ T NLS+ R P +LE T Q
Sbjct: 209 IHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPP---TLEVTQQPVRA 265
Query: 147 LEEREFACWV 156
+ C V
Sbjct: 266 ENQVNVTCQV 275
>gi|91105764 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 159 bits (402), Expect = 8e-39
Identities = 80/118 (67%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 510 VAGEE-LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
VAGEE LQVIQP+ V VAAGE ATL CT TSL+PVGPIQWFRGA PG++LIY+ K H
Sbjct: 28 VAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEGHF 87
Query: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626
PRVTT+SD KRN+ D+SIRI +IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 88 PRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Score = 115 bits (289), Expect = 1e-25
Identities = 71/149 (47%), Positives = 85/149 (57%), Gaps = 34/149 (22%)
Query: 388 MEHEGQPPKRAN--LVLSTAAHTAYKPIGSTGAAGEEELQVIQPEK-------------- 431
ME G P R L L AA A+ +G AGEEELQVIQP+K
Sbjct: 1 MEPAGPAPGRLGPLLCLLLAASCAW-----SGVAGEEELQVIQPDKSVLVAAGETATLRC 55
Query: 432 ------------WFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRAN 479
WF+G G+ELIY+ K GHFP++ +SD+TKRNN DFS+ I +IT A+
Sbjct: 56 TATSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPAD 115
Query: 480 TGTYNCVKFWKGGP-DMELKSGPGTELSV 507
GTY CVKF KG P D+E KSG GTELSV
Sbjct: 116 AGTYYCVKFRKGSPDDVEFKSGAGTELSV 144
Score = 105 bits (261), Expect = 2e-22
Identities = 76/236 (32%), Positives = 108/236 (45%), Gaps = 30/236 (12%)
Query: 188 LQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGH--TYNVTSS 245
+ GP R+ P + T S GFS +T+ W KN +EL + QT+V G +Y++ S+
Sbjct: 153 VSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHST 212
Query: 246 VLVPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLREPMTVVWRAPYPALFSTGTTP 303
V L +DV S V+C V H + T L + +R P T+ T
Sbjct: 213 AKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTL-----------EVTQQ 261
Query: 304 VTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDR 363
RA V VTC V++FYPQ + L WLE+ + + T+ +N D
Sbjct: 262 PVRAENQ-------------VNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDG 308
Query: 364 SYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAA 419
+Y LLVN S + LTC +EH+GQP + L +AH K GS AA
Sbjct: 309 TYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHP--KEQGSNTAA 362
Score = 59.3 bits (142), Expect = 1e-08
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 29 LTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASAQRLVPDNGGNDF- 87
++GP+ R +P +V F C + F+ RD + W K+ +E + P +
Sbjct: 153 VSGPAARATPQHTVSFTCESHGFSP----RDITLKWFKNGNELSDFQTNVDPVGESVSYS 208
Query: 88 ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDGTYSLEHTWQAEAT 146
I S A V LTR+DV S++ CEV H L +PL+ T NLS+ R P +LE T Q
Sbjct: 209 IHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPP---TLEVTQQPVRA 265
Query: 147 LEEREFACWV 156
+ C V
Sbjct: 266 ENQVNVTCQV 275
>gi|94538339 signal-regulatory protein gamma isoform 3 precursor
[Homo sapiens]
Length = 276
Score = 157 bits (396), Expect = 4e-38
Identities = 77/122 (63%), Positives = 94/122 (77%), Gaps = 1/122 (0%)
Query: 505 LSVHRVAGEE-LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSP 563
L + VAGEE LQ+IQPE + V G+ ATL+CTVTSLLPVGP+ WFRG PG++LIY+
Sbjct: 21 LGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQ 80
Query: 564 KRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQM 623
K H PRVTT+SD KRN+ D+SIRISSIT D GTYYC+K R+ P NVE KSGPGT+M
Sbjct: 81 KEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM 140
Query: 624 SV 625
++
Sbjct: 141 AL 142
Score = 114 bits (286), Expect = 2e-25
Identities = 60/122 (49%), Positives = 77/122 (63%), Gaps = 27/122 (22%)
Query: 413 IGSTGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSS 446
+G T AGEEELQ+IQPEK WF+G G+ELIY+
Sbjct: 21 LGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQ 80
Query: 447 KGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPD-MELKSGPGTEL 505
K GHFP++ +SD+TKRNN DFS+ I+SIT A+ GTY CVKF KG P+ +E KSGPGTE+
Sbjct: 81 KEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM 140
Query: 506 SV 507
++
Sbjct: 141 AL 142
Score = 57.0 bits (136), Expect = 5e-08
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 16 LLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASA 75
+ LG P + GP+ RT+P +V F C + F+ RD + W K+ +E
Sbjct: 140 MALGAKPSAPVV--LGPAARTTPEHTVSFTCESHGFS----PRDITLKWFKNGNELSDFQ 193
Query: 76 QRLVPDNGGNDF-ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNP 131
+ P + I S A V L DV S++ CEV H L +PL+ T NLS+A R P
Sbjct: 194 TNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIRGP 251
Score = 54.7 bits (130), Expect = 3e-07
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 190 GPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHT--YNVTSSVL 247
GP R+ P + T S GFS +T+ W KN +EL + QT+V +G + Y++ S+
Sbjct: 153 GPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRSTAR 212
Query: 248 VPLMDDDVFSHVVCHVEH 265
V L DV S V+C V H
Sbjct: 213 VVLDPWDVRSQVICEVAH 230
>gi|94538335 signal-regulatory protein gamma isoform 1 precursor
[Homo sapiens]
Length = 387
Score = 157 bits (396), Expect = 4e-38
Identities = 77/122 (63%), Positives = 94/122 (77%), Gaps = 1/122 (0%)
Query: 505 LSVHRVAGEE-LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSP 563
L + VAGEE LQ+IQPE + V G+ ATL+CTVTSLLPVGP+ WFRG PG++LIY+
Sbjct: 21 LGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQ 80
Query: 564 KRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQM 623
K H PRVTT+SD KRN+ D+SIRISSIT D GTYYC+K R+ P NVE KSGPGT+M
Sbjct: 81 KEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM 140
Query: 624 SV 625
++
Sbjct: 141 AL 142
Score = 114 bits (286), Expect = 2e-25
Identities = 60/122 (49%), Positives = 77/122 (63%), Gaps = 27/122 (22%)
Query: 413 IGSTGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSS 446
+G T AGEEELQ+IQPEK WF+G G+ELIY+
Sbjct: 21 LGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQ 80
Query: 447 KGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPD-MELKSGPGTEL 505
K GHFP++ +SD+TKRNN DFS+ I+SIT A+ GTY CVKF KG P+ +E KSGPGTE+
Sbjct: 81 KEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM 140
Query: 506 SV 507
++
Sbjct: 141 AL 142
Score = 99.0 bits (245), Expect = 1e-20
Identities = 70/222 (31%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 190 GPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHT--YNVTSSVL 247
GP R+ P + T S GFS +T+ W KN +EL + QT+V +G + Y++ S+
Sbjct: 153 GPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRSTAR 212
Query: 248 VPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLREPMTVVWRAPYPALFSTGTTPVT 305
V L DV S V+C V H + T L + +R P T+ VT
Sbjct: 213 VVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIRVPPTL---------------EVT 257
Query: 306 RASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDRSY 365
+ Q + V VTC V++FYPQ++ L W E+ + + TL +N D +Y
Sbjct: 258 Q---------QPMRVGNQVNVTCQVRKFYPQSLQLTWSENGNVCQRETASTLTENKDGTY 308
Query: 366 TLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAH 407
LVN S Q + VLTC ++H+GQ L L H
Sbjct: 309 NWTSWFLVNISDQRDDVVLTCQVKHDGQLAVSKRLALEVTVH 350
Score = 56.2 bits (134), Expect = 9e-08
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 16 LLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASA 75
+ LG P + GP+ RT+P +V F C + F+ RD + W K+ +E
Sbjct: 140 MALGAKPSAPVV--LGPAARTTPEHTVSFTCESHGFS----PRDITLKWFKNGNELSDFQ 193
Query: 76 QRLVPDNGGNDF-ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDG 133
+ P + I S A V L DV S++ CEV H L +PL+ T NLS+A R P
Sbjct: 194 TNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIRVPP- 252
Query: 134 TYSLEHTWQAEATLEEREFACWV 156
+LE T Q + C V
Sbjct: 253 --TLEVTQQPMRVGNQVNVTCQV 273
>gi|169217521 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 160
Score = 156 bits (394), Expect = 6e-38
Identities = 79/119 (66%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
Query: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
VAGE ELQVIQPE VSVAAGE ATL C +TSL+PVGPI WFRGA G++LIY+ K H
Sbjct: 10 VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 69
Query: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVRG 627
PRVTT+S+ KRN+ D+SI IS+IT DAGTYYC+K R+ P +VE KSG GT++SVRG
Sbjct: 70 PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRG 128
Score = 113 bits (283), Expect = 5e-25
Identities = 60/118 (50%), Positives = 74/118 (62%), Gaps = 27/118 (22%)
Query: 417 GAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGGH 450
G AGE+ELQVIQPEK WF+G G+ELIY+ K GH
Sbjct: 9 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
Query: 451 FPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSV 507
FP++ +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 69 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 126
>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
[Homo sapiens]
Length = 398
Score = 154 bits (388), Expect = 3e-37
Identities = 78/118 (66%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
Query: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
VAGE ELQVIQPE VSVAAGE ATL C +TSL+PVGPI WFRGA G++LIY+ K H
Sbjct: 27 VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 86
Query: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626
PRVTT+S+ KRN+ D+SI IS+IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 87 PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
Score = 115 bits (288), Expect = 1e-25
Identities = 61/119 (51%), Positives = 75/119 (63%), Gaps = 27/119 (22%)
Query: 416 TGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
TG AGE+ELQVIQPEK WF+G G+ELIY+ K G
Sbjct: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
Query: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSV 507
HFP++ +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 143
Score = 97.4 bits (241), Expect = 4e-20
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 188 LQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGH--TYNVTSS 245
+ GP R+ P + T S GFS +T+ W KN +EL + QT+V +G +Y++ S+
Sbjct: 152 VSGPAVRATPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHST 211
Query: 246 VLVPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLREPMTVVWRAPYPALFSTGTTP 303
V L DV S V+C + H + T L + +R P T+
Sbjct: 212 ARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPPTL---------------E 256
Query: 304 VTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDR 363
VT+ Q + VTC V FYP+ + L WLE+ + + TL +N D
Sbjct: 257 VTQ---------QPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETASTLIENKDG 307
Query: 364 SYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAH 407
+Y LLVN + VLTC +EH+GQ + L +AH
Sbjct: 308 TYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAH 351
Score = 60.1 bits (144), Expect = 6e-09
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 29 LTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASAQRLVPDNGGNDF- 87
++GP+ R +P +V F C + F+ RD + W K+ +E + P +
Sbjct: 152 VSGPAVRATPEHTVSFTCESHGFSP----RDITLKWFKNGNELSDFQTNVDPAGDSVSYS 207
Query: 88 ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDGTYSLEHTWQAEAT 146
I S A V LTR DV S++ CE+ H L +PL+ T NLS+A R P +LE T Q
Sbjct: 208 IHSTARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPP---TLEVTQQPMRA 264
Query: 147 LEEREFACWV 156
+ C V
Sbjct: 265 ENQANVTCQV 274
Score = 31.2 bits (69), Expect = 3.1
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 628 LLLGSKVLLLVDVSAAYVHRKQKA 651
LLLG K+LL+V VSA Y+ KQKA
Sbjct: 375 LLLGPKLLLVVGVSAIYICWKQKA 398
>gi|239751927 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 136
Score = 154 bits (388), Expect = 3e-37
Identities = 78/118 (66%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
Query: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
VAGE ELQVIQPE VSVAAGE ATL C +TSL+PVGPI WFRGA G++LIY+ K H
Sbjct: 10 VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 69
Query: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626
PRVTT+S+ KRN+ D+SI IS+IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 70 PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 127
Score = 113 bits (283), Expect = 5e-25
Identities = 60/118 (50%), Positives = 74/118 (62%), Gaps = 27/118 (22%)
Query: 417 GAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGGH 450
G AGE+ELQVIQPEK WF+G G+ELIY+ K GH
Sbjct: 9 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
Query: 451 FPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSV 507
FP++ +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 69 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 126
>gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo
sapiens]
Length = 342
Score = 124 bits (312), Expect = 2e-28
Identities = 82/251 (32%), Positives = 125/251 (49%), Gaps = 35/251 (13%)
Query: 412 PIGSTGAAGEEELQVIQPE--------------------------KWFKGTETGQELIYS 445
P ++G + + QV+QPE KW K + Q+ IY+
Sbjct: 27 PSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYN 86
Query: 446 SKGGHFPKIA-CISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPDMELKSGPGTE 504
K G FP + I ++ N D+S+ I ++TR +TGTY+CV+F E+KS GT
Sbjct: 87 FKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTS 146
Query: 505 LSVHRVAGEE--LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYS 562
+ V E L +IQP+ V G+ LNCTV P GPI+WF+GA ++ IY+
Sbjct: 147 VLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYN 206
Query: 563 PKRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQ 622
P+ T + + ++ D+SI + +++ EDAGTYYC+K +R N + SG GT
Sbjct: 207 FGGISHPKETAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTS 260
Query: 623 MSVRGLLLGSK 633
+ V+ SK
Sbjct: 261 LKVKAKSTSSK 271
>gi|30425382 signal-regulatory protein delta [Homo sapiens]
Length = 197
Score = 94.0 bits (232), Expect = 4e-19
Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 517 VIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTTISD 576
V Q E +V+ GE L+C+V LP GP+ WF+G P +KLIY+ K+ + PRV I D
Sbjct: 32 VQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGD 91
Query: 577 QRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSV 625
K +TD+S RI I+L DAGTYYC+K + A E +SG GTQ+ V
Sbjct: 92 TTKPGNTDFSTRIREISLADAGTYYCVKFIKG-RAIKEYQSGRGTQVFV 139
Score = 79.0 bits (193), Expect = 1e-14
Identities = 40/79 (50%), Positives = 51/79 (64%)
Query: 429 PEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKF 488
P WFKGT ++LIY+ K G+FP++ I D TK NTDFS I I+ A+ GTY CVKF
Sbjct: 61 PVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCVKF 120
Query: 489 WKGGPDMELKSGPGTELSV 507
KG E +SG GT++ V
Sbjct: 121 IKGRAIKEYQSGRGTQVFV 139
>gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo
sapiens]
Length = 244
Score = 80.1 bits (196), Expect = 6e-15
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 6/120 (5%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTT 573
+L +IQP+ V G+ LNCTV P GPI+WF+GA ++ IY+ P+ T
Sbjct: 60 DLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETA 119
Query: 574 ISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVRGLLLGSK 633
+ + ++ D+SI + +++ EDAGTYYC+K +R N + SG GT + V+ SK
Sbjct: 120 V----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTSSK 173
Score = 52.8 bits (125), Expect = 1e-06
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 429 PEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKF 488
P +WF+G +E IY+ G PK + + +N DFS+ + +++ + GTY CVKF
Sbjct: 92 PIRWFQGAGLSREAIYNFGGISHPKETAV----QASNNDFSILLQNVSSEDAGTYYCVKF 147
Query: 489 WKGGPDMELKSGPGTELSV 507
+ P+ + SG GT L V
Sbjct: 148 QR-KPNRQYLSGQGTSLKV 165
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 46.6 bits (109), Expect = 7e-05
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQK---LIYSPKRCHSPR 570
E+ + Q A +S++ GE ATL+C + + + W++ PGQ LIY S R
Sbjct: 26 EIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQK-PGQAPRLLIYGA----STR 80
Query: 571 VTTISDQ--RKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSV 625
T I + + TD+++ ISS+ ED YYC + P ++ ++ T+ SV
Sbjct: 81 ATGIPARFSGSGSGTDFTLTISSLQPEDFAVYYCQQDYNLPPTVIQHETKTSTRPSV 137
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 46.6 bits (109), Expect = 7e-05
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQK---LIYSPKRCHSPR 570
E+ + Q A +S++ GE ATL+C + + + W++ PGQ LIY S R
Sbjct: 21 EIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQK-PGQAPRLLIYGA----STR 75
Query: 571 VTTISDQ--RKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSV 625
T I + + TD+++ ISS+ ED YYC + P ++ ++ T+ SV
Sbjct: 76 ATGIPARFSGSGSGTDFTLTISSLQPEDFAVYYCQQDYNLPPTVIQHETKTSTRPSV 132
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 46.2 bits (108), Expect = 9e-05
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFR---GACPGQKLIYSPKRCHSPR 570
E+ + Q A +S++ GE ATL+C + + + W++ G P + LIY S R
Sbjct: 21 EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAP-RLLIYDA----SSR 75
Query: 571 VTTISDQ--RKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSV 625
T I D+ + TD+++ IS + ED YYC + + P +++++ + S+
Sbjct: 76 ATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPTVIQLETKTSARPSL 132
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 46.2 bits (108), Expect = 9e-05
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFR---GACPGQKLIYSPKRCHSPR 570
E+ + Q A +S++ GE ATL+C + + + W++ G P + LIY S R
Sbjct: 21 EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAP-RLLIYDA----SSR 75
Query: 571 VTTISDQ--RKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSV 625
T I D+ + TD+++ IS + ED YYC + + P +++++ + S+
Sbjct: 76 ATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPTVIQLETKTSARPSL 132
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 44.3 bits (103), Expect = 4e-04
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQK---LIYSPKRCHSPR 570
++QV Q + +S + G+ T+ C + + G + W++ PGQ LIY+ S
Sbjct: 23 DIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSWYQQK-PGQAPTLLIYAASSLQSGV 80
Query: 571 VTTISDQRKRNSTDYSIRISSITLEDAGTYYCMK 604
+ S + TD+++ ISS+ ED TYYC++
Sbjct: 81 PSRFSGSG--SGTDFTLTISSLQPEDVATYYCLQ 112
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 44.3 bits (103), Expect = 4e-04
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQK---LIYSPKRCHSPR 570
++QV Q + +S + G+ T+ C + + G + W++ PGQ LIY+ S
Sbjct: 23 DIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSWYQQK-PGQAPTLLIYAASSLQSGV 80
Query: 571 VTTISDQRKRNSTDYSIRISSITLEDAGTYYCMK 604
+ S + TD+++ ISS+ ED TYYC++
Sbjct: 81 PSRFSGSG--SGTDFTLTISSLQPEDVATYYCLQ 112
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 44.3 bits (103), Expect = 4e-04
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQK---LIYSPKRCHSPR 570
++QV Q + +S + G+ T+ C + + G + W++ PGQ LIY+ S
Sbjct: 23 DIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSWYQQK-PGQAPTLLIYAASSLQSGV 80
Query: 571 VTTISDQRKRNSTDYSIRISSITLEDAGTYYCMK 604
+ S + TD+++ ISS+ ED TYYC++
Sbjct: 81 PSRFSGSG--SGTDFTLTISSLQPEDVATYYCLQ 112
>gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 43.9 bits (102), Expect = 5e-04
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQK---LIYSPKRCHSPR 570
++Q+ Q + +S + G+ T+ C + + + + W++ PG+ LIY+ S
Sbjct: 103 DIQMTQSPSSLSASVGDRVTITCRASQGI-INNLNWYQKK-PGKTPKLLIYAASSLQSGI 160
Query: 571 VTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEI 615
T SD + TDY+ ISS+ ED TYYC + P +++
Sbjct: 161 PTRFSDSG--SGTDYTPTISSLQPEDFATYYCQQSDSTPPIVLQV 203
>gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 43.9 bits (102), Expect = 5e-04
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQK---LIYSPKRCHSPR 570
++Q+ Q + +S + G+ T+ C + + + + W++ PG+ LIY+ S
Sbjct: 103 DIQMTQSPSSLSASVGDRVTITCRASQGI-INNLNWYQKK-PGKTPKLLIYAASSLQSGI 160
Query: 571 VTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEI 615
T SD + TDY+ ISS+ ED TYYC + P +++
Sbjct: 161 PTRFSDSG--SGTDYTPTISSLQPEDFATYYCQQSDSTPPIVLQV 203
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 43.5 bits (101), Expect = 6e-04
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQK---LIYSPKRCHSPR 570
++Q+ Q + +S + G+ T+ C + + + W++ PG+ LIY+ S
Sbjct: 194 DIQMTQSPSSLSASVGDRVTITCRASQGIS-NNLNWYQQK-PGKTPKLLIYAASSLQSGI 251
Query: 571 VTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEI 615
+ SD + TDY++ ISS+ ED TYYC + P +++
Sbjct: 252 PSRFSDSG--SGTDYTLTISSLQPEDFATYYCQQSDSTSPTVLQV 294
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 43.5 bits (101), Expect = 6e-04
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQK---LIYSPKRCHSPR 570
++Q+ Q + +S + G+ T+ C + + + W++ PG+ LIY+ S
Sbjct: 140 DIQMTQSPSSLSASVGDRVTITCRASQGIS-NNLNWYQQK-PGKTPKLLIYAASSLQSGI 197
Query: 571 VTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEI 615
+ SD + TDY++ ISS+ ED TYYC + P +++
Sbjct: 198 PSRFSDSG--SGTDYTLTISSLQPEDFATYYCQQSDSTSPTVLQV 240
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 43.5 bits (101), Expect = 6e-04
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQK---LIYSPKRCHSPR 570
++Q+ Q + +S + G+ T+ C + + + W++ PG+ LIY+ S
Sbjct: 140 DIQMTQSPSSLSASVGDRVTITCRASQGIS-NNLNWYQQK-PGKTPKLLIYAASSLQSGI 197
Query: 571 VTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEI 615
+ SD + TDY++ ISS+ ED TYYC + P +++
Sbjct: 198 PSRFSDSG--SGTDYTLTISSLQPEDFATYYCQQSDSTSPTVLQV 240
>gi|157311649 neogenin homolog 1 [Homo sapiens]
Length = 1461
Score = 42.4 bits (98), Expect = 0.001
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 28/139 (20%)
Query: 470 MCITSITRANTGTYNCVKFWKGGP-----DMELKSGPGTELSVHRVAGEELQVIQPEAFV 524
+ I++ T + G Y CV GGP ++ELK P E V + + + QP V
Sbjct: 206 LVISNATEGDGGLYRCV-VESGGPPKYSDEVELKVLPDPE-----VISDLVFLKQPSPLV 259
Query: 525 SVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTTISDQRKRNSTD 584
V G+ L C V S LP I+W + + + T S +R
Sbjct: 260 RVI-GQDVVLPC-VASGLPTPTIKWMK---------------NEEALDTESSERLVLLAG 302
Query: 585 YSIRISSITLEDAGTYYCM 603
S+ IS +T +DAGTY+C+
Sbjct: 303 GSLEISDVTEDDAGTYFCI 321
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,613,325
Number of Sequences: 37866
Number of extensions: 1303651
Number of successful extensions: 4102
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 3613
Number of HSP's gapped (non-prelim): 565
length of query: 651
length of database: 18,247,518
effective HSP length: 109
effective length of query: 542
effective length of database: 14,120,124
effective search space: 7653107208
effective search space used: 7653107208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.