Search of human proteins with 239751870

Search of human proteins with 239751870

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751870 PREDICTED: hypothetical protein XP_002348033 [Homo
sapiens]
         (508 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751870 PREDICTED: hypothetical protein XP_002348033 [Homo ...  1043   0.0  
gi|239746361 PREDICTED: hypothetical protein XP_002343736 [Homo ...  1039   0.0  
gi|239757343 PREDICTED: hypothetical protein XP_002345253 [Homo ...   941   0.0  
gi|239758067 PREDICTED: similar to facioscapulohumeral muscular ...    42   0.001
gi|169234787 hypothetical protein LOC55683 isoform a [Homo sapiens]    40   0.007
gi|21361734 hypothetical protein LOC55683 isoform b [Homo sapiens]     40   0.007
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      37   0.032
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ...    37   0.032
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ...    37   0.032
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]            37   0.032
gi|13540521 basic helix-loop-helix domain containing, class B, 3...    37   0.032
gi|161019170 mucin 5AC [Homo sapiens]                                  36   0.095
gi|48375167 microtubule-associated protein 6 isoform 2 [Homo sap...    36   0.095
gi|48375173 microtubule-associated protein 6 isoform 1 [Homo sap...    36   0.095
gi|8400715 microtubule-associated protein tau isoform 4 [Homo sa...    35   0.12 
gi|30039694 zinc finger protein 598 [Homo sapiens]                     35   0.12 
gi|6754638 microtubule-associated protein tau isoform 2 [Homo sa...    35   0.16 
gi|8400711 microtubule-associated protein tau isoform 3 [Homo sa...    35   0.16 
gi|82534351 microtubule-associated protein tau isoform 1 [Homo s...    35   0.16 
gi|178557736 microtubule-associated protein tau isoform 5 [Homo ...    35   0.16 
gi|241982802 HMG box domain containing 3 [Homo sapiens]                35   0.16 
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         35   0.16 
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]               35   0.21 
gi|110347437 latent transforming growth factor beta binding prot...    34   0.28 
gi|110347412 latent transforming growth factor beta binding prot...    34   0.28 
gi|110347431 latent transforming growth factor beta binding prot...    34   0.28 
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]            34   0.36 
gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo s...    34   0.36 
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    34   0.36 
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       34   0.36 

>gi|239751870 PREDICTED: hypothetical protein XP_002348033 [Homo
           sapiens]
          Length = 508

 Score = 1043 bits (2696), Expect = 0.0
 Identities = 508/508 (100%), Positives = 508/508 (100%)

Query: 1   MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60
           MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL
Sbjct: 1   MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60

Query: 61  QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120
           QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA
Sbjct: 61  QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120

Query: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180
           TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL
Sbjct: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180

Query: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP 240
           VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP
Sbjct: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP 240

Query: 241 HTRGMPGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300
           HTRGMPGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ
Sbjct: 241 HTRGMPGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300

Query: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360
           AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH
Sbjct: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360

Query: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420
           LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD
Sbjct: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420

Query: 421 KWPSAPECYRQLGQMPVWGSTEVDEKPDSVLRWAPSSMMLQAGILERLVRPPATPAPGDS 480
           KWPSAPECYRQLGQMPVWGSTEVDEKPDSVLRWAPSSMMLQAGILERLVRPPATPAPGDS
Sbjct: 421 KWPSAPECYRQLGQMPVWGSTEVDEKPDSVLRWAPSSMMLQAGILERLVRPPATPAPGDS 480

Query: 481 PMILAAVDAPIMMDRLGAMKDIRDSTYS 508
           PMILAAVDAPIMMDRLGAMKDIRDSTYS
Sbjct: 481 PMILAAVDAPIMMDRLGAMKDIRDSTYS 508


>gi|239746361 PREDICTED: hypothetical protein XP_002343736 [Homo
           sapiens]
          Length = 508

 Score = 1039 bits (2687), Expect = 0.0
 Identities = 507/508 (99%), Positives = 507/508 (99%)

Query: 1   MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60
           MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL
Sbjct: 1   MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60

Query: 61  QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120
           QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA
Sbjct: 61  QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120

Query: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180
           TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL
Sbjct: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180

Query: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP 240
           VGVLLDLGGRGGALQFSDQALPSSHRGTPSTS KPSGHQPAGPTGTCSGTHSARLRPGGP
Sbjct: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSRKPSGHQPAGPTGTCSGTHSARLRPGGP 240

Query: 241 HTRGMPGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300
           HTRGMPGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ
Sbjct: 241 HTRGMPGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300

Query: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360
           AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH
Sbjct: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360

Query: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420
           LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD
Sbjct: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420

Query: 421 KWPSAPECYRQLGQMPVWGSTEVDEKPDSVLRWAPSSMMLQAGILERLVRPPATPAPGDS 480
           KWPSAPECYRQLGQMPVWGSTEVDEKPDSVLRWAPSSMMLQAGILERLVRPPATPAPGDS
Sbjct: 421 KWPSAPECYRQLGQMPVWGSTEVDEKPDSVLRWAPSSMMLQAGILERLVRPPATPAPGDS 480

Query: 481 PMILAAVDAPIMMDRLGAMKDIRDSTYS 508
           PMILAAVDAPIMMDRLGAMKDIRDSTYS
Sbjct: 481 PMILAAVDAPIMMDRLGAMKDIRDSTYS 508


>gi|239757343 PREDICTED: hypothetical protein XP_002345253 [Homo
           sapiens]
          Length = 521

 Score =  941 bits (2432), Expect = 0.0
 Identities = 474/521 (90%), Positives = 480/521 (92%), Gaps = 13/521 (2%)

Query: 1   MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60
           MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL
Sbjct: 1   MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60

Query: 61  QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120
           QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA
Sbjct: 61  QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120

Query: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180
           TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL
Sbjct: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180

Query: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP 240
           VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP
Sbjct: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP 240

Query: 241 HTRGMPGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300
           HTRGM GSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ
Sbjct: 241 HTRGMLGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300

Query: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360
           AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH
Sbjct: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360

Query: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420
           LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD
Sbjct: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420

Query: 421 KWPSAPECYRQLGQMP-----VWGSTEVDEKPD--SVLRWAPSSMMLQAGIL-----ERL 468
           KWPSAPECYRQLGQM        G+ E        ++ +WA     L    +       +
Sbjct: 421 KWPSAPECYRQLGQMVGGCSGCLGTAEGSRGAGGGAMTQWAHRWQGLHDVTVVDVAGHSV 480

Query: 469 VRPPATPA-PGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS 508
            RPP     PGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS
Sbjct: 481 SRPPLHGTQPGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS 521


>gi|239758067 PREDICTED: similar to facioscapulohumeral muscular
           dystrophy [Homo sapiens]
          Length = 468

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 50/166 (30%), Positives = 64/166 (38%), Gaps = 19/166 (11%)

Query: 205 HRGTPSTSPKPSGHQPAGPTGTCSGTHS--ARLRPGGPHTR-GMPGSLRGARSQHCSLIR 261
           H G    +P  +G      TG C    S  A    G   TR G       +R ++ SL+R
Sbjct: 243 HPGQAGRAPTKAGSLCNAATGECHPDPSWVAFAHIGAWGTRCGGGKEFSSSRKRYSSLLR 302

Query: 262 -----LACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCR 316
                 A    S SP   F+ + +           S   HP A   A   S  A  AT R
Sbjct: 303 GASREAASSNASSSPGTPFLGKVVPAAETP----GSPGAHPAAGRRAVQTSAPAPGATGR 358

Query: 317 I--CARSHPSVRSPPG--EGEGEVLQLLADTPGPEEKTPGRPSPFP 358
              C  S P++R P G   GE E+ +LL  TP    + PG P P P
Sbjct: 359 APGCLASAPAMRRPLGAQAGEVELPRLLVPTP---PRRPGDPGPSP 401


>gi|169234787 hypothetical protein LOC55683 isoform a [Homo sapiens]
          Length = 878

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 58/252 (23%), Positives = 88/252 (34%), Gaps = 19/252 (7%)

Query: 266 RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICA------ 319
           ++  SPS S  L  + + P +  +   + V    +++   +SQ       R  A      
Sbjct: 519 KLPASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVLTHKQ 578

Query: 320 RSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPHLPFCALVETVHTGCQCALG 379
              P    PP EGE E L++      P    PG  +   P +    + +    G  CA  
Sbjct: 579 AQVPISSEPPEEGEKEDLRVQLKRHHPSSPLPGSKTSKRPKIKVSLISQGDTAGGPCAPS 638

Query: 380 -GHQP----GRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPADKWPSAPECYRQLGQ 434
            G  P    G+     L Q   G + ++          ++  V A   PS          
Sbjct: 639 QGSAPEAAGGKPITMTLGQASAGAKELTGLLTTAKSSSSEGGVSASPVPSVVSSSTAPSA 698

Query: 435 MPVWGSTEVDEKPDSVLRWAPSSMMLQAG-------ILERLVRPPATPAPGDSPMILAAV 487
           +    S  V   P S L  A S+  L  G       I  +    PA P+PG +P    +V
Sbjct: 699 LHTLQSRLVATSPGSSLPGATSASSLLQGLSFSLQDISSKTSGLPANPSPGPAPQ-ATSV 757

Query: 488 DAPIMMDRLGAM 499
             P  M  LGA+
Sbjct: 758 KLPTPMQSLGAI 769


>gi|21361734 hypothetical protein LOC55683 isoform b [Homo sapiens]
          Length = 791

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 58/252 (23%), Positives = 88/252 (34%), Gaps = 19/252 (7%)

Query: 266 RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICA------ 319
           ++  SPS S  L  + + P +  +   + V    +++   +SQ       R  A      
Sbjct: 432 KLPASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVLTHKQ 491

Query: 320 RSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPHLPFCALVETVHTGCQCALG 379
              P    PP EGE E L++      P    PG  +   P +    + +    G  CA  
Sbjct: 492 AQVPISSEPPEEGEKEDLRVQLKRHHPSSPLPGSKTSKRPKIKVSLISQGDTAGGPCAPS 551

Query: 380 -GHQP----GRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPADKWPSAPECYRQLGQ 434
            G  P    G+     L Q   G + ++          ++  V A   PS          
Sbjct: 552 QGSAPEAAGGKPITMTLGQASAGAKELTGLLTTAKSSSSEGGVSASPVPSVVSSSTAPSA 611

Query: 435 MPVWGSTEVDEKPDSVLRWAPSSMMLQAG-------ILERLVRPPATPAPGDSPMILAAV 487
           +    S  V   P S L  A S+  L  G       I  +    PA P+PG +P    +V
Sbjct: 612 LHTLQSRLVATSPGSSLPGATSASSLLQGLSFSLQDISSKTSGLPANPSPGPAPQ-ATSV 670

Query: 488 DAPIMMDRLGAM 499
             P  M  LGA+
Sbjct: 671 KLPTPMQSLGAI 682


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 36/124 (29%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 207 GTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMPGSLRGARSQHCSLIRLACFR 266
           G P  +  P G  PAGP G   G    R  PGGP   G PG+ RG      S        
Sbjct: 837 GPPGVAGPPGGSGPAGPPGP-QGVKGERGSPGGPGAAGFPGA-RGLPGPPGSNGNPGPPG 894

Query: 267 ISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSVR 326
            S SP +         GP      A +   PG+   + P   A  P       +  P  +
Sbjct: 895 PSGSPGKDG-----PPGP------AGNTGAPGSPGVSGPKGDAGQPG-----EKGSPGAQ 938

Query: 327 SPPG 330
            PPG
Sbjct: 939 GPPG 942



 Score = 35.8 bits (81), Expect = 0.095
 Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 189 GRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMPGS 248
           G  GA  F   A P+   G    + +     PAGP G  +G       PGGP  RGMPGS
Sbjct: 483 GERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGA-AGEPGRDGVPGGPGMRGMPGS 541

Query: 249 LRGARS 254
             G  S
Sbjct: 542 PGGPGS 547



 Score = 31.2 bits (69), Expect = 2.3
 Identities = 35/123 (28%), Positives = 43/123 (34%), Gaps = 32/123 (26%)

Query: 148 GDPGLGGLVYLCLPHTPTARLAQVAQAESQVLLVGVLLDLGGRGGALQFSDQALPSSHRG 207
           G PG  G+   C    PT       Q +S  +  GV +     GG   +   A P    G
Sbjct: 133 GSPGPPGICESC----PTGPQNYSPQYDSYDVKSGVAV-----GGLAGYPGPAGPPGPPG 183

Query: 208 TPSTSPKPS-----GHQ-------------PAGPTGTC-----SGTHSARLRPGGPHTRG 244
            P TS  P      G+Q             P GP G       +G      RPG P  RG
Sbjct: 184 PPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERG 243

Query: 245 MPG 247
           +PG
Sbjct: 244 LPG 246



 Score = 30.0 bits (66), Expect = 5.2
 Identities = 35/133 (26%), Positives = 46/133 (34%), Gaps = 9/133 (6%)

Query: 202  PSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMPGSLRGARSQHCSLIR 261
            PS   G   TS  P    P GP G   G   +   PG P   G PG   GA    C  + 
Sbjct: 1144 PSGPPGKDGTSGHPGPIGPPGPRGN-RGERGSEGSPGHPGQPGPPGP-PGAPGPCCGGVG 1201

Query: 262  LACFRISVSPSRSFILRYLGTGP----LTCGRLASS--AVHPGAQAAASPASQAAAPA-T 314
             A               Y G  P    +    + +S  +V+   ++  SP      PA  
Sbjct: 1202 AAAIAGIGGEKAGGFAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLISPDGSRKNPARN 1261

Query: 315  CRICARSHPSVRS 327
            CR     HP ++S
Sbjct: 1262 CRDLKFCHPELKS 1274


>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
           (predicted) [Homo sapiens]
          Length = 290

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 59/238 (24%), Positives = 83/238 (34%), Gaps = 38/238 (15%)

Query: 281 GTGPLTCGRLASSAVHPGAQAAASPA-SQAAAPATCRICARSHPSVRSPPGEGEGEVLQL 339
           G  P  CG   +++  P      SP    A AP T R     H       GE E E    
Sbjct: 59  GPSPYQCGDPGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQERPEEEGEDEAEASSG 118

Query: 340 LADTPGPEEKTPGRPSPFPPHLPFCALVETVHTGCQCALGGHQ----PGRF--PPQILEQ 393
             + P P    PG P+   P    C+L   V  G +  L G +     G+    P+ L  
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSL--DVLRGVRLELAGARRRLSEGKLVSRPRALLH 176

Query: 394 RKTGVESVSYFTGRGDEGRAQSHV-PADKWPSAPECYRQ---LGQMPVWGSTEVDEKPDS 449
              G  ++S         R+ S   PA + P+AP    +    G +P   S     KP  
Sbjct: 177 GLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRS----HKPTV 232

Query: 450 VLRWAPSSMMLQAGILERLVRPP----------ATPAPGDSPMILAAVDAPIMMDRLG 497
            +R           IL    RPP          ++PA    P++ A +  P+    LG
Sbjct: 233 AVR-----------ILPAPPRPPISSPGPIIWVSSPARSLGPLLHALLHPPLTCSHLG 279


>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
           (predicted) [Homo sapiens]
          Length = 290

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 59/238 (24%), Positives = 83/238 (34%), Gaps = 38/238 (15%)

Query: 281 GTGPLTCGRLASSAVHPGAQAAASPA-SQAAAPATCRICARSHPSVRSPPGEGEGEVLQL 339
           G  P  CG   +++  P      SP    A AP T R     H       GE E E    
Sbjct: 59  GPSPYQCGDPGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQERPEEEGEDEAEASSG 118

Query: 340 LADTPGPEEKTPGRPSPFPPHLPFCALVETVHTGCQCALGGHQ----PGRF--PPQILEQ 393
             + P P    PG P+   P    C+L   V  G +  L G +     G+    P+ L  
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSL--DVLRGVRLELAGARRRLSEGKLVSRPRALLH 176

Query: 394 RKTGVESVSYFTGRGDEGRAQSHV-PADKWPSAPECYRQ---LGQMPVWGSTEVDEKPDS 449
              G  ++S         R+ S   PA + P+AP    +    G +P   S     KP  
Sbjct: 177 GLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRS----HKPTV 232

Query: 450 VLRWAPSSMMLQAGILERLVRPP----------ATPAPGDSPMILAAVDAPIMMDRLG 497
            +R           IL    RPP          ++PA    P++ A +  P+    LG
Sbjct: 233 AVR-----------ILPAPPRPPISSPGPIIWVSSPARSLGPLLHALLHPPLTCSHLG 279


>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 290

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 59/238 (24%), Positives = 83/238 (34%), Gaps = 38/238 (15%)

Query: 281 GTGPLTCGRLASSAVHPGAQAAASPA-SQAAAPATCRICARSHPSVRSPPGEGEGEVLQL 339
           G  P  CG   +++  P      SP    A AP T R     H       GE E E    
Sbjct: 59  GPSPYQCGDPGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQERPEEEGEDEAEASSG 118

Query: 340 LADTPGPEEKTPGRPSPFPPHLPFCALVETVHTGCQCALGGHQ----PGRF--PPQILEQ 393
             + P P    PG P+   P    C+L   V  G +  L G +     G+    P+ L  
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSL--DVLRGVRLELAGARRRLSEGKLVSRPRALLH 176

Query: 394 RKTGVESVSYFTGRGDEGRAQSHV-PADKWPSAPECYRQ---LGQMPVWGSTEVDEKPDS 449
              G  ++S         R+ S   PA + P+AP    +    G +P   S     KP  
Sbjct: 177 GLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRS----HKPTV 232

Query: 450 VLRWAPSSMMLQAGILERLVRPP----------ATPAPGDSPMILAAVDAPIMMDRLG 497
            +R           IL    RPP          ++PA    P++ A +  P+    LG
Sbjct: 233 AVR-----------ILPAPPRPPISSPGPIIWVSSPARSLGPLLHALLHPPLTCSHLG 279


>gi|13540521 basic helix-loop-helix domain containing, class B, 3
           [Homo sapiens]
          Length = 482

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 34/99 (34%), Positives = 40/99 (40%), Gaps = 9/99 (9%)

Query: 295 VHPGAQAAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTP-GR 353
           ++PG  A A+ A+ AAA A          SV SPP E  G      A T  P E  P G 
Sbjct: 388 LYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAA----AATLLPHEVAPLGA 443

Query: 354 PSPFPP----HLPFCALVETVHTGCQCALGGHQPGRFPP 388
           P P  P    HLPF    E  +          QPG+  P
Sbjct: 444 PHPQHPHGRTHLPFAGPREPGNPESSAQEDPSQPGKEAP 482


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 35.8 bits (81), Expect = 0.095
 Identities = 56/180 (31%), Positives = 68/180 (37%), Gaps = 44/180 (24%)

Query: 208  TPSTSPKPSG--HQPAGPTGTCSGTHSARLRPGGPHTRGMPGSLRGARSQHCSLIRLACF 265
            TPS+S + SG  H P  P  T + TH   L P  PHT      +R A +   S I     
Sbjct: 2812 TPSSSTQTSGTTHTPPVPN-TMATTHGRSLPPSSPHT------VRTAWTSATSGI----- 2859

Query: 266  RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSV 325
                          LGT  +T      S V     AA +  +Q + PA     +  HPS 
Sbjct: 2860 --------------LGTTHIT----EPSTVTSHTLAATTGTTQHSTPA----LSSPHPSS 2897

Query: 326  R---SPPGEGEGEVLQLLADTPGPEEKTPG--RPSPFPPHLPFCALVETVHT-GC--QCA 377
            R   SPP  G        A +      TP   R S   P  P  A + TV T GC  QCA
Sbjct: 2898 RTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSSPTSAPITTVVTMGCEPQCA 2957



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 55/180 (30%), Positives = 67/180 (37%), Gaps = 44/180 (24%)

Query: 208  TPSTSPKPSG--HQPAGPTGTCSGTHSARLRPGGPHTRGMPGSLRGARSQHCSLIRLACF 265
            TPS+S + SG  H P  P  T + TH   L P  PHT      +R A +   S I     
Sbjct: 3959 TPSSSTQTSGTTHTPPVPNTTAT-THGRSLPPSSPHT------VRTAWTSATSGI----- 4006

Query: 266  RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSV 325
                          LGT  +T      S V     AA +  +Q + PA     +  HPS 
Sbjct: 4007 --------------LGTTHIT----EPSTVTSHTPAATTSTTQHSTPA----LSSPHPSS 4044

Query: 326  R---SPPGEGEGEVLQLLADTPGPEEKTPG--RPSPFPPHLPFCALVET-VHTGC--QCA 377
            R   SPP  G          +      TP   R S   P  P  A + T V TGC  QCA
Sbjct: 4045 RTTESPPSPGTTTPGHTRGTSRTTATATPSKTRTSTLLPSSPTSAPITTVVTTGCEPQCA 4104



 Score = 33.5 bits (75), Expect = 0.47
 Identities = 54/180 (30%), Positives = 66/180 (36%), Gaps = 44/180 (24%)

Query: 208  TPSTSPKPSG--HQPAGPTGTCSGTHSARLRPGGPHTRGMPGSLRGARSQHCSLIRLACF 265
            TPS+S + SG  H P  P  T + TH   L P  PHT                 +R A  
Sbjct: 4461 TPSSSTQTSGTTHTPPVPNTTAT-THGRSLSPSSPHT-----------------VRTAW- 4501

Query: 266  RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSV 325
                    S     LGT  +T     +S       AA +  +Q + PA     +  HPS 
Sbjct: 4502 -------TSATSGTLGTTHITEPSTGTS----HTPAATTGTTQHSTPA----LSSPHPSS 4546

Query: 326  R---SPPGEGEGEVLQLLADTPGPEEKTPG--RPSPFPPHLPFCALVET-VHTGC--QCA 377
            R   SPP  G        A +      TP   R S   P  P  A + T V TGC  QCA
Sbjct: 4547 RTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSSPTSAPITTVVTTGCEPQCA 4606



 Score = 33.1 bits (74), Expect = 0.61
 Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 15/124 (12%)

Query: 208  TPSTSPKPSG--HQPAGPTGTCSGTHSARLRPGGPHTRGMPGSLRGARSQHCSLIRLACF 265
            TPS+S + SG  H P  P  T + TH   L P  PHT     +   + +   + I     
Sbjct: 3314 TPSSSTQTSGTTHTPPVPNTTAT-THGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPST 3372

Query: 266  RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAP-----ATCRICAR 320
              S +P+ +       TG       A S+ HP ++   SP S          AT R  A 
Sbjct: 3373 GTSHTPAAT-------TGTTQHSTPALSSPHPSSRTTESPPSPGTTTPGHTRATSRTTAT 3425

Query: 321  SHPS 324
            + PS
Sbjct: 3426 ATPS 3429


>gi|48375167 microtubule-associated protein 6 isoform 2 [Homo
           sapiens]
          Length = 439

 Score = 35.8 bits (81), Expect = 0.095
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 7/81 (8%)

Query: 284 PLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSVRSPPGEGE-GEVLQLLAD 342
           PL   + + +  HPGA     P  Q A PA     AR+  ++ + P +GE   V +    
Sbjct: 27  PLVFTKYSEATEHPGAPPQPPPPQQQAQPALAPPSARA-VAIETQPAQGELDAVARATGP 85

Query: 343 TPGPEEKT-----PGRPSPFP 358
            PGP  +      PGR  P P
Sbjct: 86  APGPTGEREPAAGPGRSGPGP 106


>gi|48375173 microtubule-associated protein 6 isoform 1 [Homo
           sapiens]
          Length = 813

 Score = 35.8 bits (81), Expect = 0.095
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 7/81 (8%)

Query: 284 PLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSVRSPPGEGE-GEVLQLLAD 342
           PL   + + +  HPGA     P  Q A PA     AR+  ++ + P +GE   V +    
Sbjct: 27  PLVFTKYSEATEHPGAPPQPPPPQQQAQPALAPPSARA-VAIETQPAQGELDAVARATGP 85

Query: 343 TPGPEEKT-----PGRPSPFP 358
            PGP  +      PGR  P P
Sbjct: 86  APGPTGEREPAAGPGRSGPGP 106


>gi|8400715 microtubule-associated protein tau isoform 4 [Homo
           sapiens]
          Length = 352

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 13/161 (8%)

Query: 300 QAAASPASQAAAPATCRICARSHPSVRSPPGEGE--------GEVLQLLADTPGPEEKTP 351
           + AA P  +  A AT RI A++ P+ ++PP  GE        G        TPG   +TP
Sbjct: 97  RGAAPPGQKGQANAT-RIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTP 155

Query: 352 GRPSPFPPHLPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEG 411
             P+P        A+V T       A    Q    P   L+  K+ + S      +   G
Sbjct: 156 SLPTPPTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGSTENLKHQPGGG 215

Query: 412 RAQ-SHVPADKWPSAPEC--YRQLGQMPVWGSTEV-DEKPD 448
           + Q  + P D      +C     +   P  G  EV  EK D
Sbjct: 216 KVQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLD 256


>gi|30039694 zinc finger protein 598 [Homo sapiens]
          Length = 904

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 64/252 (25%), Positives = 95/252 (37%), Gaps = 21/252 (8%)

Query: 126 PEERSRMVDFPPYT--TLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLLVGV 183
           P  + +  DFP  +  T   C     PG  GL    LP+   AR     Q E    LV  
Sbjct: 436 PSPKLKDEDFPSLSASTSSSCSTAATPGPVGLA---LPYAIPARGRSAFQEEDFPALVSS 492

Query: 184 LLDLGGRGGALQFSDQALPSSHR-GTPSTSPKPSGH-QPAGPTGTCSGTHSARLRPGGPH 241
           +   G    +L  +  +  SS +   P  S + +G  QP    G   G+   R + G P 
Sbjct: 493 VPKPGTAPTSLVSAWNSSSSSKKVAQPPLSAQATGSGQPTRKAG--KGSRGGR-KGGPPF 549

Query: 242 TR-----GMPGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGP--LTCGRLASSA 294
           T+     G P       ++    +       S+ PS+    + +G+     T  +   + 
Sbjct: 550 TQEEEEDGGPALQELLSTRPTGSVSSTLGLASIQPSKVGKKKKVGSEKPGTTLPQPPPAT 609

Query: 295 VHPGA-QAAASPASQAAAPATCRICARSH--PSVRSPPGEGEGEVLQLLA-DTPGPEEKT 350
             PGA QA  +PAS+A  P    +   +      RS P E  G    L +   P P+E  
Sbjct: 610 CPPGALQAPEAPASRAEGPVAVVVNGHTEGPAPARSAPKEPPGLPRPLGSFPCPTPQEDF 669

Query: 351 PGRPSPFPPHLP 362
           P    P PP +P
Sbjct: 670 PALGGPCPPRMP 681


>gi|6754638 microtubule-associated protein tau isoform 2 [Homo
           sapiens]
          Length = 441

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 300 QAAASPASQAAAPATCRICARSHPSVRSPPGEGE--------GEVLQLLADTPGPEEKTP 351
           + AA P  +  A AT RI A++ P+ ++PP  GE        G        TPG   +TP
Sbjct: 155 RGAAPPGQKGQANAT-RIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTP 213

Query: 352 GRPSPFPPHLPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEG 411
             P+P        A+V T       A    Q    P   L+  K+ + S      +   G
Sbjct: 214 SLPTPPTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGSTENLKHQPGGG 273

Query: 412 RAQ 414
           + Q
Sbjct: 274 KVQ 276


>gi|8400711 microtubule-associated protein tau isoform 3 [Homo
           sapiens]
          Length = 383

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 300 QAAASPASQAAAPATCRICARSHPSVRSPPGEGE--------GEVLQLLADTPGPEEKTP 351
           + AA P  +  A AT RI A++ P+ ++PP  GE        G        TPG   +TP
Sbjct: 97  RGAAPPGQKGQANAT-RIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTP 155

Query: 352 GRPSPFPPHLPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEG 411
             P+P        A+V T       A    Q    P   L+  K+ + S      +   G
Sbjct: 156 SLPTPPTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGSTENLKHQPGGG 215

Query: 412 RAQ 414
           + Q
Sbjct: 216 KVQ 218


>gi|82534351 microtubule-associated protein tau isoform 1 [Homo
           sapiens]
          Length = 758

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 300 QAAASPASQAAAPATCRICARSHPSVRSPPGEGE--------GEVLQLLADTPGPEEKTP 351
           + AA P  +  A AT RI A++ P+ ++PP  GE        G        TPG   +TP
Sbjct: 472 RGAAPPGQKGQANAT-RIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTP 530

Query: 352 GRPSPFPPHLPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEG 411
             P+P        A+V T       A    Q    P   L+  K+ + S      +   G
Sbjct: 531 SLPTPPTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGSTENLKHQPGGG 590

Query: 412 RAQ 414
           + Q
Sbjct: 591 KVQ 593


>gi|178557736 microtubule-associated protein tau isoform 5 [Homo
           sapiens]
          Length = 412

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 300 QAAASPASQAAAPATCRICARSHPSVRSPPGEGE--------GEVLQLLADTPGPEEKTP 351
           + AA P  +  A AT RI A++ P+ ++PP  GE        G        TPG   +TP
Sbjct: 126 RGAAPPGQKGQANAT-RIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTP 184

Query: 352 GRPSPFPPHLPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEG 411
             P+P        A+V T       A    Q    P   L+  K+ + S      +   G
Sbjct: 185 SLPTPPTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGSTENLKHQPGGG 244

Query: 412 RAQ 414
           + Q
Sbjct: 245 KVQ 247


>gi|241982802 HMG box domain containing 3 [Homo sapiens]
          Length = 1292

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 30/170 (17%)

Query: 201 LPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMPGSLRGARSQHCSLI 260
           +P+   GT ++SP P+  +P G      G+ +  L+      RG P  L  AR       
Sbjct: 466 VPTPSEGTSTSSPLPAPKKPTGVDLLTPGSRAPELK---GRARGKPSLLAAAR------- 515

Query: 261 RLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRI--- 317
                     P R+ +       P+  GR  SS   P A+ A S + +  +  TC +   
Sbjct: 516 ----------PMRAIL-----PAPVNVGR-GSSMGLPRARQAFSLSDKTPSVRTCGLKPS 559

Query: 318 -CARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPHLPFCAL 366
              +    ++ P G GE ++    ++     +    +P  FPP+   C +
Sbjct: 560 TLKQLGQPIQQPSGPGEVKLPSGPSNRTSQVKVVEVKPDMFPPYKYSCTV 609


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 47/167 (28%), Positives = 59/167 (35%), Gaps = 24/167 (14%)

Query: 208  TPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMPGSLRGARSQHCSLIRLACFRI 267
            T S +P P    P GPT T S      L P  P     P S  G    H   +  A    
Sbjct: 1731 TLSLAPGP----PLGPTQTLS------LAPAPPLA---PASPVGPAPAHTLTLAPASSSA 1777

Query: 268  SVSPSRSFILRYLGTGPL-TCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSV- 325
            S+    S     L   P+ T G  A+  +     +  SPASQA++       A   P   
Sbjct: 1778 SLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLPVTM 1837

Query: 326  --RSPPGEGEGEVLQLLADTPGPEEKT-------PGRPSPFPPHLPF 363
              R P  + E + L L +  P P           P R  P PP  PF
Sbjct: 1838 VSRLPVSKDEPDTLTLRSGPPSPPSTATSFGGPRPRRQPPPPPRSPF 1884


>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
          Length = 1860

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 8/168 (4%)

Query: 196 FSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMPGSLRGARSQ 255
           F+  ALP+  +  P++ P P+  + + P       +    RP  P TR +P +   ++  
Sbjct: 396 FTKSALPTQKQVPPTSRPVPA--RVSRPAEKPIQRNPGMPRPPPPSTRPLPPTTSSSKKP 453

Query: 256 HCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASS-AVHPGAQAAASPASQAAAPAT 314
             +L R    +I+   S+    R     P     L+SS A  PG+  +  P +    P +
Sbjct: 454 IPTLARTEA-KITSHASKPASARTSTHKPPPFTALSSSPAPTPGSTRSTRPPATMVPPTS 512

Query: 315 CRICARSHPSVRSPPGEGEGEVLQLLADT---PGPEEKTPGRPSPFPP 359
                R+ P+V +P     G    + ++     GP + +P +P P  P
Sbjct: 513 GTSTPRTAPAVPTPGSAPTGSKKPIGSEASKKAGP-KSSPRKPVPLRP 559



 Score = 30.0 bits (66), Expect = 5.2
 Identities = 38/171 (22%), Positives = 58/171 (33%), Gaps = 27/171 (15%)

Query: 208 TPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMPGSLRGARSQHCSLIRLACFRI 267
           TP+    P+G  P G     + T   R  P  PH     G          +   L   ++
Sbjct: 276 TPALGSLPAGRGPRGTVAPATPTKPQRTSPTNPHQHMAVGG--------PAQTPLLPAKL 327

Query: 268 SVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPAS---QAAAPATCRICARS-HP 323
           S S +   +L     G     R A++       A   P S   + +AP+T  +  +S HP
Sbjct: 328 SASNALDPMLPASVGGSTRTPRPAAAQPSQKITATKIPKSLPTKPSAPSTSIVPIKSPHP 387

Query: 324 SVRSPPGEGEGEVLQLLADTP---------------GPEEKTPGRPSPFPP 359
           + ++ P       L      P                P ++ PG P P PP
Sbjct: 388 TQKTAPSSFTKSALPTQKQVPPTSRPVPARVSRPAEKPIQRNPGMPRPPPP 438


>gi|110347437 latent transforming growth factor beta binding protein 4
            isoform c [Homo sapiens]
          Length = 1557

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 38/140 (27%), Positives = 49/140 (35%), Gaps = 22/140 (15%)

Query: 202  PSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPG-GPHT--RGMPGSLR-------- 250
            P S+R TP+  P   G+QP  P G C      R R   G H   + +PGS +        
Sbjct: 959  PGSYRCTPACDP---GYQPT-PGGGCQDVDECRNRSFCGAHAVCQNLPGSFQCLCDQGYE 1014

Query: 251  GARS-------QHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAA 303
            GAR          C  ++  C            L      P     +    V P   A  
Sbjct: 1015 GARDGRHCVDVNECETLQGVCGAALCENVEGSFLCVCPNSPEEFDPMTGRCVPPRTSAGT 1074

Query: 304  SPASQAAAPATCRICARSHP 323
             P SQ  APA+  + AR  P
Sbjct: 1075 FPGSQPQAPASPVLPARPPP 1094


>gi|110347412 latent transforming growth factor beta binding protein 4
            isoform b [Homo sapiens]
          Length = 1587

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 38/140 (27%), Positives = 49/140 (35%), Gaps = 22/140 (15%)

Query: 202  PSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPG-GPHT--RGMPGSLR-------- 250
            P S+R TP+  P   G+QP  P G C      R R   G H   + +PGS +        
Sbjct: 989  PGSYRCTPACDP---GYQPT-PGGGCQDVDECRNRSFCGAHAVCQNLPGSFQCLCDQGYE 1044

Query: 251  GARS-------QHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAA 303
            GAR          C  ++  C            L      P     +    V P   A  
Sbjct: 1045 GARDGRHCVDVNECETLQGVCGAALCENVEGSFLCVCPNSPEEFDPMTGRCVPPRTSAGT 1104

Query: 304  SPASQAAAPATCRICARSHP 323
             P SQ  APA+  + AR  P
Sbjct: 1105 FPGSQPQAPASPVLPARPPP 1124


>gi|110347431 latent transforming growth factor beta binding protein 4
            isoform a [Homo sapiens]
          Length = 1624

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 38/140 (27%), Positives = 49/140 (35%), Gaps = 22/140 (15%)

Query: 202  PSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPG-GPHT--RGMPGSLR-------- 250
            P S+R TP+  P   G+QP  P G C      R R   G H   + +PGS +        
Sbjct: 1026 PGSYRCTPACDP---GYQPT-PGGGCQDVDECRNRSFCGAHAVCQNLPGSFQCLCDQGYE 1081

Query: 251  GARS-------QHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAA 303
            GAR          C  ++  C            L      P     +    V P   A  
Sbjct: 1082 GARDGRHCVDVNECETLQGVCGAALCENVEGSFLCVCPNSPEEFDPMTGRCVPPRTSAGT 1141

Query: 304  SPASQAAAPATCRICARSHP 323
             P SQ  APA+  + AR  P
Sbjct: 1142 FPGSQPQAPASPVLPARPPP 1161


>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 18/82 (21%)

Query: 299 AQAAASPASQAAAPATCRICA--RSHPSVRSP--PGEGEGEVLQLL-------------- 340
           A AAA P +    PA  R+ A   + P  RSP   G G G++   L              
Sbjct: 51  APAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPA 110

Query: 341 ADTPGPEEKTPGRPSPFPPHLP 362
           A +PGP    P  P P PP  P
Sbjct: 111 APSPGPLPARPSSPPPSPPSPP 132


>gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo
           sapiens]
          Length = 3014

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 37/108 (34%), Positives = 40/108 (37%), Gaps = 26/108 (24%)

Query: 278 RYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPAT---CRICARSHPS-----VRSPP 329
           R  GTG   CG L      PG  AAA   S  AAP T   CR   R  P      +  PP
Sbjct: 119 RLCGTGARLCGALCFPV--PGGCAAAQH-SALAAPTTLPACRCPPRPRPRCPGRPICLPP 175

Query: 330 G------------EGEGEV---LQLLADTPGPEEKTPGRPSPFPPHLP 362
           G               G V   L L A T G    +P    P PP+LP
Sbjct: 176 GGSVRLRLLCALRRAAGAVRVGLALEAATAGTPSASPSPSPPLPPNLP 223


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 43/177 (24%), Positives = 61/177 (34%), Gaps = 22/177 (12%)

Query: 203 SSHRGTPSTSPKPSGHQPA---GPTGTCSGTHSARLRPGGPHTRG---MPGS---LRGAR 253
           S  RG P  +P     + A   GP GT   T +     GGP        P S   L+  R
Sbjct: 466 SRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTPSTATGGPPEDSPTVAPKSTTFLKNIR 525

Query: 254 SQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPA 313
                ++     R+  +P R     ++   P    ++  S V       + P  Q  AP 
Sbjct: 526 QFIMPVVSARSSRVIKTPRR-----FMDEDPPKPPKVEVSPVLRPPITTSPPVPQEPAPV 580

Query: 314 TCRICARSHPSVRSPPGEGEGEVLQ--------LLADTPGPEEKTPGRPSPFPPHLP 362
                A + PS   P  E    +L+        L  + P P    P  P+P PP  P
Sbjct: 581 PSPPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAPSPPPAP 637


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 53/195 (27%), Positives = 67/195 (34%), Gaps = 50/195 (25%)

Query: 173 QAESQVLLVGVLLDLGGRGGALQFSDQALPS--SHRGTPSTSPKPSGHQ----PAGPTGT 226
           Q E + L+V ++++   +    Q    A P   SH  TPS    P G Q    PAGP   
Sbjct: 399 QDEDKQLIVELVVNKMAQALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPP-- 456

Query: 227 CSGTHSARLRP---GGPHTRGMPGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTG 283
                 A+ RP   GGP   G     +G   Q               P         G G
Sbjct: 457 ------AQQRPPPQGGPPQPGPGPQRQGPPLQQ-------------RPPPQGQQHLSGLG 497

Query: 284 PLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADT 343
           P     L      P   A   PASQAA                 PP +G+G   + +A  
Sbjct: 498 PPAGSPLPQRLPSP-TSAPQQPASQAA-----------------PPTQGQGRQSRPVAGG 539

Query: 344 PG--PEEKTPGRPSP 356
           PG  P  + P  PSP
Sbjct: 540 PGAPPAARPPASPSP 554


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,375,791
Number of Sequences: 37866
Number of extensions: 1500405
Number of successful extensions: 7885
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 246
Number of HSP's that attempted gapping in prelim test: 7475
Number of HSP's gapped (non-prelim): 701
length of query: 508
length of database: 18,247,518
effective HSP length: 107
effective length of query: 401
effective length of database: 14,195,856
effective search space: 5692538256
effective search space used: 5692538256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.