Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 239751601

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751601 PREDICTED: hypothetical protein XP_002347933 [Homo
sapiens]
         (282 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751601 PREDICTED: hypothetical protein XP_002347933 [Homo ...   593   e-170
gi|239746116 PREDICTED: hypothetical protein XP_002344200 [Homo ...   593   e-170
gi|239757095 PREDICTED: similar to hCG2005276 [Homo sapiens]          487   e-138
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            38   0.011
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            38   0.011
gi|60097902 filaggrin [Homo sapiens]                                   36   0.043
gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo ...    35   0.057
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]            35   0.074
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]            34   0.13 
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]            34   0.13 
gi|24308382 leukocyte receptor cluster member 8 [Homo sapiens]         34   0.16 
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]         33   0.22 
gi|239749065 PREDICTED: hypothetical protein XP_002346903 [Homo ...    33   0.28 
gi|239508743 PREDICTED: hypothetical protein [Homo sapiens]            33   0.28 
gi|163965366 nascent polypeptide-associated complex alpha subuni...    33   0.37 
gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]            32   0.48 
gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo ...    32   0.48 
gi|239757152 PREDICTED: hypothetical protein [Homo sapiens]            32   0.63 
gi|239751653 PREDICTED: hypothetical protein XP_002347960 [Homo ...    32   0.63 
gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]        32   0.63 
gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo s...    32   0.82 
gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo sa...    32   0.82 
gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo sa...    32   0.82 
gi|116256464 hypothetical protein LOC343990 [Homo sapiens]             32   0.82 
gi|239753721 PREDICTED: hypothetical protein [Homo sapiens]            31   1.1  
gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo ...    31   1.1  
gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo ...    31   1.1  
gi|81174549 hypothetical protein LOC84792 [Homo sapiens]               31   1.1  
gi|239744733 PREDICTED: hypothetical protein XP_002343257 [Homo ...    31   1.4  
gi|32171205 EF-hand domain family, member A2 [Homo sapiens]            31   1.4  

>gi|239751601 PREDICTED: hypothetical protein XP_002347933 [Homo
           sapiens]
          Length = 282

 Score =  593 bits (1530), Expect = e-170
 Identities = 282/282 (100%), Positives = 282/282 (100%)

Query: 1   MALSERTFRKLGVFSMGTSGLLEICCDSHEGHTQARGIPGDLCGGECVRWEQQEAASPLP 60
           MALSERTFRKLGVFSMGTSGLLEICCDSHEGHTQARGIPGDLCGGECVRWEQQEAASPLP
Sbjct: 1   MALSERTFRKLGVFSMGTSGLLEICCDSHEGHTQARGIPGDLCGGECVRWEQQEAASPLP 60

Query: 61  PCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLR 120
           PCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLR
Sbjct: 61  PCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLR 120

Query: 121 SMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGGLRSRSLR 180
           SMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGGLRSRSLR
Sbjct: 121 SMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGGLRSRSLR 180

Query: 181 RPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRETEAGGPAGSGA 240
           RPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRETEAGGPAGSGA
Sbjct: 181 RPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRETEAGGPAGSGA 240

Query: 241 FWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDVPRLCYIY 282
           FWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDVPRLCYIY
Sbjct: 241 FWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDVPRLCYIY 282


>gi|239746116 PREDICTED: hypothetical protein XP_002344200 [Homo
           sapiens]
          Length = 282

 Score =  593 bits (1530), Expect = e-170
 Identities = 282/282 (100%), Positives = 282/282 (100%)

Query: 1   MALSERTFRKLGVFSMGTSGLLEICCDSHEGHTQARGIPGDLCGGECVRWEQQEAASPLP 60
           MALSERTFRKLGVFSMGTSGLLEICCDSHEGHTQARGIPGDLCGGECVRWEQQEAASPLP
Sbjct: 1   MALSERTFRKLGVFSMGTSGLLEICCDSHEGHTQARGIPGDLCGGECVRWEQQEAASPLP 60

Query: 61  PCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLR 120
           PCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLR
Sbjct: 61  PCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLR 120

Query: 121 SMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGGLRSRSLR 180
           SMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGGLRSRSLR
Sbjct: 121 SMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGGLRSRSLR 180

Query: 181 RPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRETEAGGPAGSGA 240
           RPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRETEAGGPAGSGA
Sbjct: 181 RPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRETEAGGPAGSGA 240

Query: 241 FWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDVPRLCYIY 282
           FWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDVPRLCYIY
Sbjct: 241 FWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDVPRLCYIY 282


>gi|239757095 PREDICTED: similar to hCG2005276 [Homo sapiens]
          Length = 261

 Score =  487 bits (1253), Expect = e-138
 Identities = 232/232 (100%), Positives = 232/232 (100%)

Query: 51  EQQEAASPLPPCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAA 110
           EQQEAASPLPPCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAA
Sbjct: 30  EQQEAASPLPPCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAA 89

Query: 111 PGQALSMGLRSMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQG 170
           PGQALSMGLRSMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQG
Sbjct: 90  PGQALSMGLRSMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQG 149

Query: 171 TGGLRSRSLRRPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRET 230
           TGGLRSRSLRRPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRET
Sbjct: 150 TGGLRSRSLRRPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRET 209

Query: 231 EAGGPAGSGAFWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDVPRLCYIY 282
           EAGGPAGSGAFWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDVPRLCYIY
Sbjct: 210 EAGGPAGSGAFWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDVPRLCYIY 261


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 56/223 (25%), Positives = 79/223 (35%), Gaps = 48/223 (21%)

Query: 45  GECVRWEQQEAASPLPPCGSLEGRRWSGASSAP------AVRPHQGWSQSSHRGDSAHQS 98
           G+  +W++   + P P    L  RRW  +   P      +  P  G    S R  SAH  
Sbjct: 122 GKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPP 181

Query: 99  PWGSDQILAGAAPGQALSM----------GLRSMQVGARWAQANEPTRRS-PHWAAGPGG 147
             GS ++  G    QA              + S+   A+ A+A  P  R+    AAG  G
Sbjct: 182 GRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSRG 241

Query: 148 HQGLAAESTRGRRLWLGTCPRQGTGGLRSRSLRRPWARSSLESWAPRGASGSLTLSQWLL 207
             G    + RG                   + + P AR  L S     A  SL  S   L
Sbjct: 242 RGGAERPAARG------------------SAQQPPLARLLLASAVSLAA--SLARSPPPL 281

Query: 208 AP-LGASAPPQSWVPVS----------PLNRRETEAGGPAGSG 239
            P LG+++PP+   P++          P   R      PAG G
Sbjct: 282 QPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHG 324


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 56/223 (25%), Positives = 79/223 (35%), Gaps = 48/223 (21%)

Query: 45  GECVRWEQQEAASPLPPCGSLEGRRWSGASSAP------AVRPHQGWSQSSHRGDSAHQS 98
           G+  +W++   + P P    L  RRW  +   P      +  P  G    S R  SAH  
Sbjct: 122 GKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPP 181

Query: 99  PWGSDQILAGAAPGQALSM----------GLRSMQVGARWAQANEPTRRS-PHWAAGPGG 147
             GS ++  G    QA              + S+   A+ A+A  P  R+    AAG  G
Sbjct: 182 GRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSRG 241

Query: 148 HQGLAAESTRGRRLWLGTCPRQGTGGLRSRSLRRPWARSSLESWAPRGASGSLTLSQWLL 207
             G    + RG                   + + P AR  L S     A  SL  S   L
Sbjct: 242 RGGAERPAARG------------------SAQQPPLARLLLASAVSLAA--SLARSPPPL 281

Query: 208 AP-LGASAPPQSWVPVS----------PLNRRETEAGGPAGSG 239
            P LG+++PP+   P++          P   R      PAG G
Sbjct: 282 QPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHG 324


>gi|60097902 filaggrin [Homo sapiens]
          Length = 4061

 Score = 35.8 bits (81), Expect = 0.043
 Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 27/210 (12%)

Query: 64   SLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLRSMQ 123
            S +  RWSG++S    R H+G +Q   R  S H +    D+   G +   +   G    +
Sbjct: 3549 SEDSERWSGSAS----RNHRGSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSGTHHAE 3604

Query: 124  --VGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTG-GLRSRSLR 180
               G + A ++E  R S       G H   +A+S+R            G G G  S ++R
Sbjct: 3605 NSSGGQAASSHEQARSSA--GERHGSHHQQSADSSR----------HSGIGHGQASSAVR 3652

Query: 181  RPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRETEAGGPAGSGA 240
                R S  S A      S       ++  G + P Q     S   R    AG    SG+
Sbjct: 3653 DSGHRGSSGSQASDSEGHSEDSDTQSVSAHGQAGPHQQSHQESTRGR---SAGRSGRSGS 3709

Query: 241  FWQRRATKSRLAAAGVWFSEAKAGVGTQGR 270
            F  + +T  +  +A       +AG  T GR
Sbjct: 3710 FLYQVSTHEQSESA-----HGRAGPSTGGR 3734



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 8/96 (8%)

Query: 64   SLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLRSMQ 123
            S +  RWSG++S    R H G +Q   R  S H      D+   G +   +   G R  Q
Sbjct: 2577 SEDSERWSGSAS----RNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSGTRHTQ 2632

Query: 124  V--GARWAQANEPTRRSPHWAAGPGGHQGLAAESTR 157
               G + A ++E  R S       G H   +A+S+R
Sbjct: 2633 TSSGGQAASSHEQARSSA--GERHGSHHQQSADSSR 2666



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 8/96 (8%)

Query: 64   SLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLRSMQ 123
            S +  RWSG++S    R H G +Q   R  S H      D+   G +   +   G R  Q
Sbjct: 2901 SEDSERWSGSAS----RNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSGTRHTQ 2956

Query: 124  V--GARWAQANEPTRRSPHWAAGPGGHQGLAAESTR 157
               G + A ++E  R S       G H   +A+S+R
Sbjct: 2957 TSSGGQAASSHEQARSSA--GERHGSHHQQSADSSR 2990



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 25/149 (16%)

Query: 64   SLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLRSMQ 123
            S +  RWSG++S    R H+G  Q   R  S H      D+   G +  ++   G R  +
Sbjct: 3225 SEDSERWSGSAS----RNHRGSVQEQSRHGSRHPRSHHEDRAGHGHSADRSRQSGTRHAE 3280

Query: 124  V--GARWAQANEPTRRSP--------HWAAGPGGHQGL----AAESTRGRRLWLGTCPRQ 169
               G + A ++E  R SP          +A    H G+    A+ + R  R W       
Sbjct: 3281 TSSGGQAASSHEQARSSPGERHGSRHQQSADSSRHSGIPRGQASSAVRDSRHW------- 3333

Query: 170  GTGGLRSRSLRRPWARSSLESWAPRGASG 198
            G+ G ++         S  +S +  G +G
Sbjct: 3334 GSSGSQASDSEGHSEESDTQSVSGHGQAG 3362



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 25/138 (18%)

Query: 64  SLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLRSMQ 123
           S +  RWSG++S    R H G +Q   R  S H      D+   G +   +   G R  Q
Sbjct: 631 SEDSERWSGSAS----RNHHGSAQEQSRDGSRHPRSHHEDRAGHGHSADSSRKSGTRHTQ 686

Query: 124 --VGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGGLRSRSLRR 181
                + A ++E  R S     G   HQ  +A+S+R            GTG         
Sbjct: 687 NSSSGQAASSHEQARSSAGERHG-SRHQLQSADSSR----------HSGTG--------H 727

Query: 182 PWARSSLESWAPRGASGS 199
             A S++     RG+SGS
Sbjct: 728 GQASSAVRDSGHRGSSGS 745



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 26/138 (18%)

Query: 64  SLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLRSMQ 123
           S +  R SG++S    R H G +    R  S H      D+   G +   +   G R  +
Sbjct: 307 SEDSERHSGSAS----RNHHGSAWEQSRDGSRHPRSHDEDRASHGHSADSSRQSGTRHAE 362

Query: 124 VGAR--WAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGGLRSRSLRR 181
             +R   A ++E  R SP    G G  Q  +A+S+R             TG        R
Sbjct: 363 TSSRGQTASSHEQARSSPGERHGSGHQQ--SADSSR----------HSATG--------R 402

Query: 182 PWARSSLESWAPRGASGS 199
             A S++     RG+SGS
Sbjct: 403 GQASSAVSDRGHRGSSGS 420



 Score = 28.9 bits (63), Expect = 5.3
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 64   SLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLRSMQ 123
            S +  RWSG++S    R H G +    R  S H      D+   G +   +   G R  +
Sbjct: 1928 SEDSERWSGSAS----RNHLGSAWEQSRDGSRHPGSHHEDRAGHGHSADSSRQSGTRHTE 1983

Query: 124  VGARW--AQANEPTRRSPHWAAGPGGHQGLAAESTR 157
              +R   A ++E  R S     G   HQ  +A+S+R
Sbjct: 1984 SSSRGQAASSHEQARSSAGERHG-SHHQLQSADSSR 2018


>gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo
           sapiens]
          Length = 239

 Score = 35.4 bits (80), Expect = 0.057
 Identities = 44/160 (27%), Positives = 60/160 (37%), Gaps = 30/160 (18%)

Query: 117 MGLRSMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGGLRS 176
           + LRS +V  R A       R+  W  G  GH  +   +TR  RL           G+  
Sbjct: 47  LSLRSPEVVGRVASR----ARARTWEGGKEGHAAVPQPATRSGRL-----------GVWG 91

Query: 177 RSLRRPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRETEAGGPA 236
             LR  WA    ++   RG  G            G S P  +  P S  +R    A G  
Sbjct: 92  GPLRHSWAPRPRQASQTRGGGG------------GPSLPGPAGRP-SGRSRSRVGARGRL 138

Query: 237 GSGAFWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDVP 276
            SG     +  +S LAAA  W + A+  +G  G  P + P
Sbjct: 139 PSGGSHLPQPPRS-LAAASAWQAVARE-LGLSGPRPTEAP 176


>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1230

 Score = 35.0 bits (79), Expect = 0.074
 Identities = 45/186 (24%), Positives = 64/186 (34%), Gaps = 20/186 (10%)

Query: 70  WSGASSAPAVRPHQ-GWSQSSHRGDSAHQSPWGSDQILAGAAPGQA----LSMGLRSMQV 124
           W+  S++ A  P   GW+  S  G S   + W S      + P  +     S    S   
Sbjct: 100 WASPSASGASIPSDSGWASPSVSGASIPSAFWASPSASGASTPSDSGWASPSASWASTSS 159

Query: 125 GARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRR----LWLGTCPRQGTG----GLRS 176
            + WA  +  +  SP  +       G +  S  G       W+       +     G  S
Sbjct: 160 DSGWASPSA-SWTSPSASCASSSASGASTPSDSGWASPSVFWVSPSTSWASSPSDFGWAS 218

Query: 177 RSLRRPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRETEAGGPA 236
                 WA SS    +P  ASG+ T S       G ++P  SWV  S      +   G A
Sbjct: 219 TPSDSGWASSSASCISP-SASGASTSSD-----SGWASPSASWVSTSTSRASTSSDSGWA 272

Query: 237 GSGAFW 242
            S A W
Sbjct: 273 SSSASW 278


>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 55/185 (29%), Positives = 66/185 (35%), Gaps = 32/185 (17%)

Query: 106 LAGAAPGQALSMGLRSMQVGARWAQANEPTRRSPH------------WAAGPGGHQGLAA 153
           L GA PG A S   R  Q   R     +P    PH              + P  H  L  
Sbjct: 500 LRGARPGPAASAATRMWQGSGRRRPGPDPQELDPHCKLSFPRLPLTPTESQPPSH-NLFV 558

Query: 154 ESTRGRRLWLGTCPRQGTGGLRSRSLRRPWA----RSSLESWAPRGASGSLTLSQWLLAP 209
           E  RG R  L        G +  R+LRR       R+   S AP  ASGS+  S      
Sbjct: 559 EELRGARAAL------ARGWMLPRALRRQLCPIDPRARPGSVAPAAASGSIESSS----- 607

Query: 210 LGASAPPQSWVPVSPLNRRETEAGGP--AGS--GAFWQRRATKSRLAAAGVWFSEAKAGV 265
           L   A   +        RR TEAG P  AG   GA   R     R+A A   F   ++  
Sbjct: 608 LSGRAARLALGKHRACLRRGTEAGRPRLAGERRGAGDGRARDFRRIALAAPQFPHLESNT 667

Query: 266 GTQGR 270
             +GR
Sbjct: 668 LGRGR 672


>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 55/185 (29%), Positives = 66/185 (35%), Gaps = 32/185 (17%)

Query: 106 LAGAAPGQALSMGLRSMQVGARWAQANEPTRRSPH------------WAAGPGGHQGLAA 153
           L GA PG A S   R  Q   R     +P    PH              + P  H  L  
Sbjct: 500 LRGARPGPAASAATRMWQGSGRRRPGPDPQELDPHCKLSFPRLPLTPTESQPPSH-NLFV 558

Query: 154 ESTRGRRLWLGTCPRQGTGGLRSRSLRRPWA----RSSLESWAPRGASGSLTLSQWLLAP 209
           E  RG R  L        G +  R+LRR       R+   S AP  ASGS+  S      
Sbjct: 559 EELRGARAAL------ARGWMLPRALRRQLCPIDPRARPGSVAPAAASGSIESSS----- 607

Query: 210 LGASAPPQSWVPVSPLNRRETEAGGP--AGS--GAFWQRRATKSRLAAAGVWFSEAKAGV 265
           L   A   +        RR TEAG P  AG   GA   R     R+A A   F   ++  
Sbjct: 608 LSGRAARLALGKHRACLRRGTEAGRPRLAGERRGAGDGRARDFRRIALAAPQFPHLESNT 667

Query: 266 GTQGR 270
             +GR
Sbjct: 668 LGRGR 672


>gi|24308382 leukocyte receptor cluster member 8 [Homo sapiens]
          Length = 800

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 6/126 (4%)

Query: 65  LEGRRWSGASSAPAVRPHQGW-SQSSHRGDSAHQSPWGSDQILAGAAPGQALSM--GLRS 121
           + G   S     P+   HQG  +Q    G     S     Q L  A P Q  +   G  +
Sbjct: 119 MAGSYGSATPQQPSAPQHQGTLNQPPVPGMDESMSYQAPPQQLPSAQPPQPSNPPHGAHT 178

Query: 122 MQVGAR--WAQANEPTRRSPHWAAGPGGHQGLA-AESTRGRRLWLGTCPRQGTGGLRSRS 178
           +  G +   A A + ++  P      G H     A+  +G++LW    P  GTGGL+   
Sbjct: 179 LNSGPQPGTAPATQHSQAGPATGQAYGPHTYTEPAKPKKGQQLWNRMKPAPGTGGLKFNI 238

Query: 179 LRRPWA 184
            +RP+A
Sbjct: 239 QKRPFA 244


>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
          Length = 953

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 46/227 (20%), Positives = 80/227 (35%), Gaps = 43/227 (18%)

Query: 57  SPLPPCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQ------SPWGSDQILAGAA 110
           SP PP    E  +   A++ P V+    W     R  S  +      SP  + +    +A
Sbjct: 487 SPQPPSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRARRRRKTSA 546

Query: 111 PGQALSMGLRSMQVGARWAQANEPTRRS-----PHWAAGPGGHQGLAAESTRGRRLWLGT 165
              + S   RS    + ++ +     RS       +++    H   +   +R R      
Sbjct: 547 SSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSRSRSRSFSSSP 606

Query: 166 CPRQGTGGLRSRSLRRPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPL 225
            P        + S  RP  R+  E   P G +G  ++ +    P    APPQ+    +P+
Sbjct: 607 SPSP------TPSPHRPSIRTKGEPAPPPGKAGEKSVKK----PAPPPAPPQATKTTAPV 656

Query: 226 ----------------------NRRETEAGGPAGSGAFWQRRATKSR 250
                                  RR T +G  +GSG+ +   +++SR
Sbjct: 657 PEPTKPGDPREARRKERPARTPPRRRTLSGSGSGSGSSYSGSSSRSR 703


>gi|239749065 PREDICTED: hypothetical protein XP_002346903 [Homo
           sapiens]
          Length = 128

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 36/119 (30%), Positives = 39/119 (32%), Gaps = 28/119 (23%)

Query: 60  PPCGSLEGRRWSGASSAPA---------VRP-----HQGWSQSSHRGDSAHQSPWGSDQI 105
           PP G    RR  G SS P           RP       GW +   RG  A   P GS   
Sbjct: 9   PPPGDTASRRLGGVSSRPGRIRRRGLGRERPPPTVTEVGWGREVRRGFEACARPVGSHS- 67

Query: 106 LAGAAPGQALSMGLRSMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLG 164
               AP    + G          A +  P   SPH    PGG  G A  S   R L  G
Sbjct: 68  ---GAPRVCRAEG----------AASPGPPSSSPHLTRRPGGPWGSAPRSASLRALSAG 113


>gi|239508743 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 128

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 36/119 (30%), Positives = 39/119 (32%), Gaps = 28/119 (23%)

Query: 60  PPCGSLEGRRWSGASSAPA---------VRP-----HQGWSQSSHRGDSAHQSPWGSDQI 105
           PP G    RR  G SS P           RP       GW +   RG  A   P GS   
Sbjct: 9   PPPGDTASRRLGGVSSRPGRIRRRGLGRERPPPTVTEVGWGREVRRGFEACARPVGSHS- 67

Query: 106 LAGAAPGQALSMGLRSMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLG 164
               AP    + G          A +  P   SPH    PGG  G A  S   R L  G
Sbjct: 68  ---GAPRVCRAEG----------AASPGPPSSSPHLTRRPGGPWGSAPRSASLRALSAG 113


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 43/184 (23%), Positives = 59/184 (32%), Gaps = 36/184 (19%)

Query: 55   AASPLPPCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQA 114
            AA+P  P G L      GA + PA  P       S +G  A   P G+    A   P   
Sbjct: 1107 AATPPSPKGGLATPPHKGAPTTPAATP------PSPKGGLATPPPKGAPTTPAATPP--- 1157

Query: 115  LSMGLRSMQVGARWAQANEPTRRSPHWAAG--PGGHQGLAAESTRGRRLWLGTCPRQGTG 172
                        +   A  P + +P   A   P    GLA  S +G        P    G
Sbjct: 1158 ----------SPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1207

Query: 173  GLRSRSLRRPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRETEA 232
            GL + S +      +    +P+G               G + P     P +P     +  
Sbjct: 1208 GLATPSPKGAPTTPAATPPSPKG---------------GLATPSPKGAPTTPAATPPSPK 1252

Query: 233  GGPA 236
            GGPA
Sbjct: 1253 GGPA 1256


>gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 303

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 55/209 (26%), Positives = 71/209 (33%), Gaps = 46/209 (22%)

Query: 52  QQEAASPLPPCGSLEGRRWSGASSAPAVRPH-QGWSQSSHRGDSAHQSPWGSDQILAGAA 110
           Q  AA+P PP         S A   P  RP   G  + +  G       W +  + AG  
Sbjct: 102 QVAAAAPAPPA--------SWAPPQPGRRPTCPGCCRGAASGAPRWVRTWAAAAVAAG-- 151

Query: 111 PGQALSMGLRSMQVGARWAQANEPTRRSPHWAAGPG-GHQGLAAESTRGRRLWLGTCPRQ 169
           PG++        +  A WA         P  AAGP  GH   AA+     R   G    +
Sbjct: 152 PGRSAPQ----REPRAAWAACPA----GPSSAAGPERGHVSCAADEPGTERS--GAAAAR 201

Query: 170 GTGGL--RSRSLRRPWARSSL------ESWAPR--GASGSLTLS--------------QW 205
           G+ G   R R     WAR S         W  +  GA G+                  Q 
Sbjct: 202 GSAGASSRGRGALGAWARHSAVRLDSGRGWRGKTPGAGGAAERGAQLAKCPASKAFGDQS 261

Query: 206 LLAPLGASAPPQSWVPVSPLNRRETEAGG 234
           L  PL  +      +P SPL+R   E  G
Sbjct: 262 LRGPLAGAQSRPDLLPASPLSRLGEEGKG 290


>gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo
           sapiens]
          Length = 303

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 55/209 (26%), Positives = 71/209 (33%), Gaps = 46/209 (22%)

Query: 52  QQEAASPLPPCGSLEGRRWSGASSAPAVRPH-QGWSQSSHRGDSAHQSPWGSDQILAGAA 110
           Q  AA+P PP         S A   P  RP   G  + +  G       W +  + AG  
Sbjct: 102 QVAAAAPAPPA--------SWAPPQPGRRPTCPGCCRGAASGAPRWVRTWAAAAVAAG-- 151

Query: 111 PGQALSMGLRSMQVGARWAQANEPTRRSPHWAAGPG-GHQGLAAESTRGRRLWLGTCPRQ 169
           PG++        +  A WA         P  AAGP  GH   AA+     R   G    +
Sbjct: 152 PGRSAPQ----REPRAAWAACPA----GPSSAAGPERGHVSCAADEPGTERS--GAAAAR 201

Query: 170 GTGGL--RSRSLRRPWARSSL------ESWAPR--GASGSLTLS--------------QW 205
           G+ G   R R     WAR S         W  +  GA G+                  Q 
Sbjct: 202 GSAGASSRGRGALGAWARHSAVRLDSGRGWRGKTPGAGGAAERGAQLAKCPASKAFGDQS 261

Query: 206 LLAPLGASAPPQSWVPVSPLNRRETEAGG 234
           L  PL  +      +P SPL+R   E  G
Sbjct: 262 LRGPLAGAQSRPDLLPASPLSRLGEEGKG 290


>gi|239757152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score = 32.0 bits (71), Expect = 0.63
 Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 15/82 (18%)

Query: 42  LCGGECVRWEQQ--EAASPLPPCGSLEGRRWSGASSAPAVRPHQ------GWSQSSHRGD 93
           +C    VRW +   E A P PPCG L G    G S   A RP        GW+ S   G 
Sbjct: 131 VCWPGVVRWGRGCLELAGPGPPCGRLRG---LGPSPPRAARPSVPAAAGCGWAGSRDSGR 187

Query: 94  SAHQSP----WGSDQILAGAAP 111
                P     G + +L  +AP
Sbjct: 188 PVPSLPVDCGLGPEALLCSSAP 209


>gi|239751653 PREDICTED: hypothetical protein XP_002347960 [Homo
           sapiens]
          Length = 235

 Score = 32.0 bits (71), Expect = 0.63
 Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 15/82 (18%)

Query: 42  LCGGECVRWEQQ--EAASPLPPCGSLEGRRWSGASSAPAVRPHQ------GWSQSSHRGD 93
           +C    VRW +   E A P PPCG L G    G S   A RP        GW+ S   G 
Sbjct: 131 VCWPGVVRWGRGCLELAGPGPPCGRLRG---LGPSPPRAARPSVPAAAGCGWAGSRDSGR 187

Query: 94  SAHQSP----WGSDQILAGAAP 111
                P     G + +L  +AP
Sbjct: 188 PVPSLPVDCGLGPEALLCSSAP 209


>gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
          Length = 753

 Score = 32.0 bits (71), Expect = 0.63
 Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 10/56 (17%)

Query: 141 WAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGGL--------RSRSLRRPWARSSL 188
           W  GP G  G    ST     W    P +GT  +        R R L RPW R+ L
Sbjct: 215 WGCGPSG--GTRRRSTTQPHPWAAEGPARGTPSVGSLWKRRARGRQLNRPWGRARL 268


>gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo
            sapiens]
          Length = 1662

 Score = 31.6 bits (70), Expect = 0.82
 Identities = 20/82 (24%), Positives = 32/82 (39%)

Query: 64   SLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLRSMQ 123
            +L+       S +P+ +PH     S  RG S    P G   + + AA  Q  +M  R ++
Sbjct: 1017 ALQSPSCQSRSHSPSCQPHGHSPSSQSRGQSPSCQPRGQSPLRSQAASRQVSTMPSRKLE 1076

Query: 124  VGARWAQANEPTRRSPHWAAGP 145
                 A +       P  + GP
Sbjct: 1077 TTLNGAHSTSEGPAKPKSSRGP 1098


>gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo
            sapiens]
          Length = 1810

 Score = 31.6 bits (70), Expect = 0.82
 Identities = 20/82 (24%), Positives = 32/82 (39%)

Query: 64   SLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLRSMQ 123
            +L+       S +P+ +PH     S  RG S    P G   + + AA  Q  +M  R ++
Sbjct: 1165 ALQSPSCQSRSHSPSCQPHGHSPSSQSRGQSPSCQPRGQSPLRSQAASRQVSTMPSRKLE 1224

Query: 124  VGARWAQANEPTRRSPHWAAGP 145
                 A +       P  + GP
Sbjct: 1225 TTLNGAHSTSEGPAKPKSSRGP 1246


>gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo
            sapiens]
          Length = 1810

 Score = 31.6 bits (70), Expect = 0.82
 Identities = 20/82 (24%), Positives = 32/82 (39%)

Query: 64   SLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAAPGQALSMGLRSMQ 123
            +L+       S +P+ +PH     S  RG S    P G   + + AA  Q  +M  R ++
Sbjct: 1165 ALQSPSCQSRSHSPSCQPHGHSPSSQSRGQSPSCQPRGQSPLRSQAASRQVSTMPSRKLE 1224

Query: 124  VGARWAQANEPTRRSPHWAAGP 145
                 A +       P  + GP
Sbjct: 1225 TTLNGAHSTSEGPAKPKSSRGP 1246


>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
          Length = 962

 Score = 31.6 bits (70), Expect = 0.82
 Identities = 56/217 (25%), Positives = 79/217 (36%), Gaps = 27/217 (12%)

Query: 51  EQQEAASPLPPCGSLEGRRWSGASSAPAVRPHQGWSQSSHRGDSAHQSPWGSDQILAGAA 110
           E++    P    G+   R  +  S+APA  P    S   HR  +A + P  S  + A  +
Sbjct: 461 EREAETEPERGAGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAES 520

Query: 111 PGQALSMGLRSMQVGA----RWAQANEP----TRRSPHWAAGPGGHQGLAAESTRGRRLW 162
           P      G    +  A    +  +A  P     R +P   A  GG     AE    ++  
Sbjct: 521 PPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGG-----AELRGAKKFS 575

Query: 163 LGTC---PRQGTG-GLRSRSLRRPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQS 218
           + +C   PR G    L   S R P ARS    W    A   L   Q L  P  A   P+ 
Sbjct: 576 VSSCRARPRPGVSRPLERASGRLPLARSG-PVWRSEAALDDL---QGLPEPQHAKPGPRK 631

Query: 219 WVPVSPLNRRETEAGGPAGSGAFWQRRATKSRLAAAG 255
                P +  +  A  PAG      R++ +   AA G
Sbjct: 632 LAERGPQDSGD-RAASPAG-----PRKSPQEAAAAPG 662


>gi|239753721 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 342

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 62/228 (27%), Positives = 78/228 (34%), Gaps = 29/228 (12%)

Query: 55  AASPLPPCGSLEGRRWSGASSAPAVRPHQGWSQSSH-RGDSAHQSPWGSDQILAGAAPGQ 113
           A  PL   G+  G R S        R       ++H R +   +   GS     G A G 
Sbjct: 82  APGPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGGSPAAREGDAAGW 141

Query: 114 ALSMGLRSMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGG 173
            L+ GL     G R   +  P   SP  AA PG  +    + T  RR+ L   P  G   
Sbjct: 142 LLAPGLGPRLRGGRGGWSPAPKAGSP-MAAAPG--RTCEGKRTAPRRMLLPDSPYAGRPQ 198

Query: 174 LRSRSL------RRPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNR 227
               SL      RRP A +     APRG      L +   A +  S           L  
Sbjct: 199 RARTSLCAAPASRRPPAPTVA---APRGLETRPALPRRAGAAVHGS---------EGLAL 246

Query: 228 RETEAGGPAGSGAFWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDV 275
           R       AGSGA   R   +S       W   A AG+G    L + V
Sbjct: 247 RAKRRDANAGSGARRCRELPES-------WILRAAAGLGPMFLLSERV 287


>gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo
           sapiens]
          Length = 342

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 62/228 (27%), Positives = 78/228 (34%), Gaps = 29/228 (12%)

Query: 55  AASPLPPCGSLEGRRWSGASSAPAVRPHQGWSQSSH-RGDSAHQSPWGSDQILAGAAPGQ 113
           A  PL   G+  G R S        R       ++H R +   +   GS     G A G 
Sbjct: 82  APGPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGGSPAAREGDAAGW 141

Query: 114 ALSMGLRSMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGG 173
            L+ GL     G R   +  P   SP  AA PG  +    + T  RR+ L   P  G   
Sbjct: 142 LLAPGLGPRLRGGRGGWSPAPKAGSP-MAAAPG--RTCEGKRTAPRRMLLPDSPYAGRPQ 198

Query: 174 LRSRSL------RRPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNR 227
               SL      RRP A +     APRG      L +   A +  S           L  
Sbjct: 199 RARTSLCAAPASRRPPAPTVA---APRGLETRPALPRRAGAAVHGS---------EGLAL 246

Query: 228 RETEAGGPAGSGAFWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDV 275
           R       AGSGA   R   +S       W   A AG+G    L + V
Sbjct: 247 RAKRRDANAGSGARRCRELPES-------WILRAAAGLGPMFLLSERV 287


>gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo
           sapiens]
          Length = 342

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 62/228 (27%), Positives = 78/228 (34%), Gaps = 29/228 (12%)

Query: 55  AASPLPPCGSLEGRRWSGASSAPAVRPHQGWSQSSH-RGDSAHQSPWGSDQILAGAAPGQ 113
           A  PL   G+  G R S        R       ++H R +   +   GS     G A G 
Sbjct: 82  APGPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGGSPAAREGDAAGW 141

Query: 114 ALSMGLRSMQVGARWAQANEPTRRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTGG 173
            L+ GL     G R   +  P   SP  AA PG  +    + T  RR+ L   P  G   
Sbjct: 142 LLAPGLGPRLRGGRGGWSPAPKAGSP-MAAAPG--RTCEGKRTAPRRMLLPDSPYAGRPQ 198

Query: 174 LRSRSL------RRPWARSSLESWAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNR 227
               SL      RRP A +     APRG      L +   A +  S           L  
Sbjct: 199 RARTSLCAAPASRRPPAPTVA---APRGLETRPALPRRAGAAVHGS---------EGLAL 246

Query: 228 RETEAGGPAGSGAFWQRRATKSRLAAAGVWFSEAKAGVGTQGRLPDDV 275
           R       AGSGA   R   +S       W   A AG+G    L + V
Sbjct: 247 RAKRRDANAGSGARRCRELPES-------WILRAAAGLGPMFLLSERV 287


>gi|81174549 hypothetical protein LOC84792 [Homo sapiens]
          Length = 259

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 22/95 (23%)

Query: 100 WGSDQILAGAAPGQALSMGLRSMQVGAR-WAQANEPT--------RRSPHWAAGPGGHQG 150
           W +  ++ G +  +ALS+ +R    GA  W  +  P         RR+P  AA P    G
Sbjct: 46  WMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAATPSTAVG 105

Query: 151 LAAESTR-------------GRRLWLGTCPRQGTG 172
           L    T              GRR WLG  PR   G
Sbjct: 106 LFPAPTECFARVSCSGVEALGRRDWLGGGPRATDG 140


>gi|239744733 PREDICTED: hypothetical protein XP_002343257 [Homo
           sapiens]
          Length = 659

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 44/175 (25%), Positives = 65/175 (37%), Gaps = 34/175 (19%)

Query: 32  HTQARGIPGDLCGGECVRW----EQQEAASPLPPCGSLEGRRW-SGASSAPAVRPHQGWS 86
           ++++RG P       C  W    + + +  P   C +  GRR  SG     AV     W+
Sbjct: 25  NSESRGAP--YLRSRCTGWTPTSQTRPSGRPADACAADSGRRRASGRLGRSAVSSGVLWT 82

Query: 87  QSSHRGDSAHQSPWGSDQILAGAAPGQALSMGL-RSMQVGARWA----------QANEPT 135
            S   G    + P G ++     A G+     + R ++  A W+          +A+ P 
Sbjct: 83  DSPEAGPGRIR-PGGVERGFGEPAKGEGFRGPVGRLIKTWASWSPARPRPDGSIKASLPA 141

Query: 136 RRSPHWAAGPGGHQGLAAESTRGRRLWLGTCPRQGTG--GLRSRSLRRPWARSSL 188
           R SP     P G          G  LW   CPR G G  G    SL   W+ S +
Sbjct: 142 RLSPR----PLGS---------GASLWPFVCPRFGAGREGASPVSLLERWSCSRM 183


>gi|32171205 EF-hand domain family, member A2 [Homo sapiens]
          Length = 530

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 191 WAPRGASGSLTLSQWLLAPLGASAPPQSWVPVSPLNRRETEAGGPAGSGAFWQRRATKSR 250
           W P   S  L   Q LL P G  A     +P  P + RE E    A + A W+RR     
Sbjct: 9   WPPPRVSPPLCAHQPLLGPWGRPAVTTLGLPGRPFSSREDEE--RAVAEAAWRRRRRWGE 66

Query: 251 LAAAGVWFSEAKAGVGTQG 269
           L+ A      A AG G  G
Sbjct: 67  LSVA------AAAGGGLVG 79


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,337,669
Number of Sequences: 37866
Number of extensions: 713987
Number of successful extensions: 2724
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 2655
Number of HSP's gapped (non-prelim): 155
length of query: 282
length of database: 18,247,518
effective HSP length: 101
effective length of query: 181
effective length of database: 14,423,052
effective search space: 2610572412
effective search space used: 2610572412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press