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Search of human proteins with 239751590
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751590 PREDICTED: hypothetical protein XP_002347921 [Homo
sapiens]
(192 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751590 PREDICTED: hypothetical protein XP_002347921 [Homo ... 398 e-111
gi|239746102 PREDICTED: hypothetical protein XP_002343657 [Homo ... 398 e-111
gi|239757083 PREDICTED: similar to hCG1996962 [Homo sapiens] 397 e-111
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 44 6e-05
gi|119943102 CREB binding protein isoform b [Homo sapiens] 43 2e-04
gi|119943104 CREB binding protein isoform a [Homo sapiens] 43 2e-04
gi|92859670 solute carrier family 6 (neurotransmitter transporte... 42 4e-04
gi|153792110 HEG homolog 1 [Homo sapiens] 39 0.002
gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens] 37 0.008
gi|16507243 GSK-3 binding protein FRAT2 [Homo sapiens] 36 0.023
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi... 34 0.067
gi|91208420 bassoon protein [Homo sapiens] 34 0.067
gi|83367077 mucin 16 [Homo sapiens] 34 0.087
gi|134276943 separase [Homo sapiens] 33 0.11
gi|148612835 zinc finger protein 207 isoform c [Homo sapiens] 33 0.11
gi|156416026 zinc finger protein 219 [Homo sapiens] 33 0.11
gi|156415998 zinc finger protein 219 [Homo sapiens] 33 0.11
gi|4508017 zinc finger protein 207 isoform a [Homo sapiens] 33 0.11
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 33 0.11
gi|156415996 zinc finger protein 219 [Homo sapiens] 33 0.11
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 33 0.15
gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi... 33 0.15
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 33 0.19
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 33 0.19
gi|188536004 zinc finger protein 469 [Homo sapiens] 33 0.19
gi|194272140 dendrin [Homo sapiens] 33 0.19
gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo sapi... 32 0.25
gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo sapi... 32 0.25
gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo sapi... 32 0.25
gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo sapi... 32 0.25
>gi|239751590 PREDICTED: hypothetical protein XP_002347921 [Homo
sapiens]
Length = 192
Score = 398 bits (1023), Expect = e-111
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MQRGPLSPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSS 60
MQRGPLSPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSS
Sbjct: 1 MQRGPLSPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSS 60
Query: 61 GMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGV 120
GMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGV
Sbjct: 61 GMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGV 120
Query: 121 AVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQ 180
AVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQ
Sbjct: 121 AVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQ 180
Query: 181 ANPDEQQPQVAY 192
ANPDEQQPQVAY
Sbjct: 181 ANPDEQQPQVAY 192
>gi|239746102 PREDICTED: hypothetical protein XP_002343657 [Homo
sapiens]
Length = 192
Score = 398 bits (1023), Expect = e-111
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MQRGPLSPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSS 60
MQRGPLSPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSS
Sbjct: 1 MQRGPLSPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSS 60
Query: 61 GMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGV 120
GMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGV
Sbjct: 61 GMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGV 120
Query: 121 AVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQ 180
AVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQ
Sbjct: 121 AVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQ 180
Query: 181 ANPDEQQPQVAY 192
ANPDEQQPQVAY
Sbjct: 181 ANPDEQQPQVAY 192
>gi|239757083 PREDICTED: similar to hCG1996962 [Homo sapiens]
Length = 192
Score = 397 bits (1019), Expect = e-111
Identities = 191/192 (99%), Positives = 191/192 (99%)
Query: 1 MQRGPLSPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSS 60
MQRGPLSPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSS
Sbjct: 1 MQRGPLSPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSS 60
Query: 61 GMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGV 120
GMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLG
Sbjct: 61 GMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGA 120
Query: 121 AVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQ 180
AVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQ
Sbjct: 121 AVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQ 180
Query: 181 ANPDEQQPQVAY 192
ANPDEQQPQVAY
Sbjct: 181 ANPDEQQPQVAY 192
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 44.3 bits (103), Expect = 6e-05
Identities = 37/117 (31%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Query: 62 MHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTP-RRGSLGV 120
+ R P P A + PG P +PRA R G L A P P P RR S
Sbjct: 758 VRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRAS 817
Query: 121 AVFSSSDLTFDAEAQGQVRRPRPAQA----VGPSGARRPEAPGWFRKSDRSGRAGTG 173
S+S + A G RPA + +GP+ A R AP R+ S A G
Sbjct: 818 RPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSPDRRDSASPGAAGG 874
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 42.7 bits (99), Expect = 2e-04
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 11 SDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSSGMHREPLSST 70
S G ++G P G S + A L + P ++ P T S +H P ++
Sbjct: 764 SSGAMSVGMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPPPAS 823
Query: 71 PIAHCESQRRGTTGPGM-PCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDLT 129
A S + TT PGM P P A + + V + + P TP GS+ A + S T
Sbjct: 824 TAAGMPSLQH-TTPPGMTPPQPAAPTQPSTPVS-SSGQTPTPTP--GSVPSATQTQSTPT 879
Query: 130 FDAEAQGQVRRPRPAQAVGPSGARRPEA 157
A AQ QV P+P V P P++
Sbjct: 880 VQAAAQAQV-TPQPQTPVQPPSVATPQS 906
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 42.7 bits (99), Expect = 2e-04
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 11 SDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSSGMHREPLSST 70
S G ++G P G S + A L + P ++ P T S +H P ++
Sbjct: 802 SSGAMSVGMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPPPAS 861
Query: 71 PIAHCESQRRGTTGPGM-PCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDLT 129
A S + TT PGM P P A + + V + + P TP GS+ A + S T
Sbjct: 862 TAAGMPSLQH-TTPPGMTPPQPAAPTQPSTPVS-SSGQTPTPTP--GSVPSATQTQSTPT 917
Query: 130 FDAEAQGQVRRPRPAQAVGPSGARRPEA 157
A AQ QV P+P V P P++
Sbjct: 918 VQAAAQAQV-TPQPQTPVQPPSVATPQS 944
>gi|92859670 solute carrier family 6 (neurotransmitter transporter,
glycine), member 5 [Homo sapiens]
Length = 797
Score = 41.6 bits (96), Expect = 4e-04
Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 85 PGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDL-TFDAEAQG----QVR 139
P PCAPR + + APP PPR PR S G F S+D +AE G ++
Sbjct: 26 PDGPCAPRTSPEQELPAAAAPP--PPRVPRSASTGAQTFQSADARACEAERPGVGSCKLS 83
Query: 140 RPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTG 173
PR AQA + EA G + S G +G G
Sbjct: 84 SPR-AQAASAALRDLREAQG-AQASPPPGSSGPG 115
>gi|153792110 HEG homolog 1 [Homo sapiens]
Length = 1381
Score = 39.3 bits (90), Expect = 0.002
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 101 VLVAPP-----RVPPRTPRRGSLGVAVFSSSDLTFDAEAQGQVRRPR--PAQAVGPS--- 150
+L+ PP R PP +P R +L +A + + L E + + P P + GP+
Sbjct: 20 LLLLPPAAPGTRDPPPSPARRALSLAPLAGAGLELQLERRPEREPPPTPPRERRGPATPG 79
Query: 151 -GARRPEAPGWFRKSDRSGRAGTG-----AWSQWPQANPDEQQPQVAY 192
R PE PG + SGRA G AW WP++N + + +
Sbjct: 80 PSYRAPE-PGAATQRGPSGRAPRGGSADAAWKHWPESNTEAHVENITF 126
>gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
Length = 1834
Score = 37.4 bits (85), Expect = 0.008
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 24/115 (20%)
Query: 63 HREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAV--------GVLVAPP-------- 106
H EPLS PI H +R TGP +P + EA G+L P
Sbjct: 1429 HMEPLSPIPIDHWNLER---TGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQ 1485
Query: 107 -RVPPRTPRRGSLGVA--VFSSSDL--TFDAEAQGQVRRPRPAQAVGPSGARRPE 156
++ ++ GSLG + F +S L +D E Q P PAQ GA++PE
Sbjct: 1486 RKLQEKSSGAGSLGNSRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPE 1540
>gi|16507243 GSK-3 binding protein FRAT2 [Homo sapiens]
Length = 233
Score = 35.8 bits (81), Expect = 0.023
Identities = 34/106 (32%), Positives = 39/106 (36%), Gaps = 13/106 (12%)
Query: 85 PGMPCAPRAQRREAVGVLVA--------PPRVPPRTPRRGSLGVAVFSSSDLTFDAEAQG 136
P PCAP A G L A PP VP P + V S L +G
Sbjct: 60 PASPCAPPGVPLRAPGPLAAAVPADKARPPAVPLLLPPASAETVGPAPSGALRCALGDRG 119
Query: 137 QVR-RPRP----AQAVGPSGARRPEAPGWFRKSDRSGRAGTGAWSQ 177
+VR R P A GPS P GW R + S R W+Q
Sbjct: 120 RVRGRAAPYCVAEVAAGPSALPGPCRRGWLRDAVTSRRLQQRRWTQ 165
>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 547
Score = 34.3 bits (77), Expect = 0.067
Identities = 42/155 (27%), Positives = 55/155 (35%), Gaps = 30/155 (19%)
Query: 8 PSPSDGLGALGTTY-----------PGVHRGQSMAGLRVPAFNAGL-RAITPSRAETQHP 55
P P G G G PG HR S GLR G+ R I PSR P
Sbjct: 257 PGPVPGAGGCGEDRLGSQPRPENGPPGSHRTASGRGLRRGDSEGGVNRGIGPSRVSLLAP 316
Query: 56 ETTSSGMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRR 115
+ ++ L++ P RG+ PG P PR Q G L P +
Sbjct: 317 D-------KKRLNNAP--------RGSAAPGPPRGPRLQ---GGGSLTLQPDYAKYATFK 358
Query: 116 GSLGVAVFSSSDLTFDAEAQGQVRRPRPAQAVGPS 150
+ A + + + + RPRPA A PS
Sbjct: 359 AAALKAAVPRARRSANRLPRPSGPRPRPAPARSPS 393
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 34.3 bits (77), Expect = 0.067
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 16/120 (13%)
Query: 47 PSRAETQHPETTSSGMH---REPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLV 103
PS A ++ P+T + P + A + Q + TT P A + + G
Sbjct: 3768 PSGAASRQPQTQQQQQGLGLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPST 3827
Query: 104 AP---PRVPPRTPR-RGSLGVAVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPG 159
A P PPR + GS G A A QG+ + +PA GP+G + PG
Sbjct: 3828 ATGPQPAGPPRAEQTNGSKGTA---------KAPQQGRAPQAQPAPGPGPAGVKAGARPG 3878
Score = 28.1 bits (61), Expect = 4.8
Identities = 49/182 (26%), Positives = 67/182 (36%), Gaps = 34/182 (18%)
Query: 2 QRGPLSPSPSDGL----GALGT-TYPGVHRGQSMAGLRVPAFNAG--LRAITPSRAETQH 54
Q GP +P + G LG T+P H PA G +R + PS A +
Sbjct: 2130 QHGPGLSAPQSLVPLRPGLLGNPTFPEGHPSPGNLAQYGPAAGQGTAVRQLLPSTATVRA 2189
Query: 55 PETTSSGMHREPLSST-PIAHCESQRRGTTGPGMPCAPRAQ----RREAVGVLVAPP--- 106
+ P+++T PI TT P P + R A G + A P
Sbjct: 2190 ADGMIYSTINTPIAATLPI---------TTQPASVLRPMVRGGMYRPYASGGITAVPLTS 2240
Query: 107 --RVPPRTPR--RGSLGV------AVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPE 156
RVP PR G G+ + F + AE + +P A+A G G RPE
Sbjct: 2241 LTRVPMIAPRVPLGPTGLYRYPAPSRFPIASSVPPAEGPVYLGKPAAAKAPGAGGPSRPE 2300
Query: 157 AP 158
P
Sbjct: 2301 MP 2302
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.9 bits (76), Expect = 0.087
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Query: 7 SPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQH-PETTSSGMHRE 65
SP P + A+ TT + L VP+ P+ +ET + PETT++ +
Sbjct: 11524 SPGP-EASSAVSTTTISPDMSDLVTSL-VPSSGTDTSTTFPTLSETPYEPETTATWLTHP 11581
Query: 66 PLSSTPIAHCE---SQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVP 109
+ST ++ S R T P M +P R V PP +P
Sbjct: 11582 AETSTTVSGTIPNFSHRGSDTAPSMVTSPGVDTRSGVPTTTIPPSIP 11628
Score = 32.0 bits (71), Expect = 0.33
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 19/120 (15%)
Query: 6 LSPSPSDG-LGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSSGMHR 64
L+PSP + A T+PG G F +R + S P+T +S +
Sbjct: 11649 LTPSPGEPETTASSATHPGTQTG----------FTVPIRTVPSSE-----PDTMASWVTH 11693
Query: 65 EPLSSTPIAHCESQRRGTT---GPGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGVA 121
P +STP++ S ++ P M +PR + AV ++P T + S G A
Sbjct: 11694 PPQTSTPVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAA 11753
>gi|134276943 separase [Homo sapiens]
Length = 2120
Score = 33.5 bits (75), Expect = 0.11
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 47 PSRAETQHPETTSSGMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPP 106
PS+ + Q SG R+ L+S P+ + ++G G G+PC P+ R + A P
Sbjct: 1307 PSKTQGQK----RSGRGRQKLASAPLRLNNTSQKGLEGRGLPCTPKPPDR----IRQAGP 1358
Query: 107 RVP 109
VP
Sbjct: 1359 HVP 1361
>gi|148612835 zinc finger protein 207 isoform c [Homo sapiens]
Length = 494
Score = 33.5 bits (75), Expect = 0.11
Identities = 45/176 (25%), Positives = 61/176 (34%), Gaps = 38/176 (21%)
Query: 5 PLSPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSSGMHR 64
PL PS G +GT S A + +A +A+ PS A+ Q G
Sbjct: 269 PLFPSA----GQMGTPVTS----SSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDF 320
Query: 65 EPLSSTPIAHCESQRRGTTGPGMPCAP-----RAQRREAVGVLVAPPRV-----PPRTPR 114
+PL+STP TT P P P A A P P
Sbjct: 321 KPLNSTPAT--------TTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTT 372
Query: 115 RGSLGVAVFSSSDLTFDAEAQGQVRR-----PRPAQA------VGPSGARRPEAPG 159
+ + D++ + E + Q+ + PRP QA VGP G P PG
Sbjct: 373 TSATSKLIHPDEDISLE-ERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPG 427
Score = 30.0 bits (66), Expect = 1.3
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 15/77 (19%)
Query: 85 PGMPCAPRAQRREAVGVLVAPPRV--------PPRT----PRRGSLGVAVFSSSDLTFDA 132
PG+P +AQ A G+L PP PP T P G +G V SSS + ++
Sbjct: 232 PGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNS 291
Query: 133 E---AQGQVRRPRPAQA 146
E A + P AQA
Sbjct: 292 ESLSASSKALFPSTAQA 308
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 33.5 bits (75), Expect = 0.11
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Query: 92 RAQRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDLTFDAEAQGQVRRPRPAQAVGPSG 151
R R + G PP PP +RGS + S RP P+ GP
Sbjct: 547 RHHREQRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRP-PSSGAGPGS 605
Query: 152 ARRPEAPGWFRKSDRSGRA 170
R+P +PG ++ R G A
Sbjct: 606 RRKPASPGRTLRNGRGGEA 624
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 33.5 bits (75), Expect = 0.11
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Query: 92 RAQRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDLTFDAEAQGQVRRPRPAQAVGPSG 151
R R + G PP PP +RGS + S RP P+ GP
Sbjct: 547 RHHREQRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRP-PSSGAGPGS 605
Query: 152 ARRPEAPGWFRKSDRSGRA 170
R+P +PG ++ R G A
Sbjct: 606 RRKPASPGRTLRNGRGGEA 624
>gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
Length = 478
Score = 33.5 bits (75), Expect = 0.11
Identities = 45/176 (25%), Positives = 61/176 (34%), Gaps = 38/176 (21%)
Query: 5 PLSPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSSGMHR 64
PL PS G +GT S A + +A +A+ PS A+ Q G
Sbjct: 253 PLFPSA----GQMGTPVTS----SSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDF 304
Query: 65 EPLSSTPIAHCESQRRGTTGPGMPCAP-----RAQRREAVGVLVAPPRV-----PPRTPR 114
+PL+STP TT P P P A A P P
Sbjct: 305 KPLNSTPAT--------TTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTT 356
Query: 115 RGSLGVAVFSSSDLTFDAEAQGQVRR-----PRPAQA------VGPSGARRPEAPG 159
+ + D++ + E + Q+ + PRP QA VGP G P PG
Sbjct: 357 TSATSKLIHPDEDISLE-ERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPG 411
Score = 30.0 bits (66), Expect = 1.3
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 15/77 (19%)
Query: 85 PGMPCAPRAQRREAVGVLVAPPRV--------PPRT----PRRGSLGVAVFSSSDLTFDA 132
PG+P +AQ A G+L PP PP T P G +G V SSS + ++
Sbjct: 216 PGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNS 275
Query: 133 E---AQGQVRRPRPAQA 146
E A + P AQA
Sbjct: 276 ESLSASSKALFPSTAQA 292
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 33.5 bits (75), Expect = 0.11
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 109 PPRTPRRGSLGVAVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPG-WFRKSDRS 167
PP + + S S + A VR+PRP Q G G++ P A G W RS
Sbjct: 1148 PPPSSKVSSHSSQATKDSGVGLKYSASTPVRKPRPGQQDGKEGSQPPPASGYWVYSPIRS 1207
Query: 168 G--------RAGTGAWSQWPQANPDEQQP 188
G A +G SQ D+++P
Sbjct: 1208 GLHKLFPSRDADSGGDSQEESELDDQEEP 1236
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 33.5 bits (75), Expect = 0.11
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Query: 92 RAQRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDLTFDAEAQGQVRRPRPAQAVGPSG 151
R R + G PP PP +RGS + S RP P+ GP
Sbjct: 547 RHHREQRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRP-PSSGAGPGS 605
Query: 152 ARRPEAPGWFRKSDRSGRA 170
R+P +PG ++ R G A
Sbjct: 606 RRKPASPGRTLRNGRGGEA 624
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 33.1 bits (74), Expect = 0.15
Identities = 43/159 (27%), Positives = 55/159 (34%), Gaps = 20/159 (12%)
Query: 5 PLSPSPSDGLGALGTT-YPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSSGMH 63
P +P P G G PG + GL P+ G + + + E P M
Sbjct: 946 PGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPP----GPMG 1001
Query: 64 REPLSSTPIAHCESQRRGTTG----PGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLG 119
L+ P ES R G G PG +P A+ PP P G +G
Sbjct: 1002 PPGLAGPP---GESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVG 1058
Query: 120 VAVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAP 158
A S +G+ PA VGP GAR P P
Sbjct: 1059 PAGKSGD--------RGETGPAGPAGPVGPVGARGPAGP 1089
>gi|113429443 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 492
Score = 33.1 bits (74), Expect = 0.15
Identities = 50/199 (25%), Positives = 68/199 (34%), Gaps = 40/199 (20%)
Query: 8 PSPSDGLGALGTTY-----------PGVHRGQSMAGLRVPAFNAGL-RAITPSRAETQHP 55
P P G G G PG HR S GLR G+ R I PSR P
Sbjct: 257 PGPVPGAGGCGEDRLGSQPRPENGPPGSHRTASGRGLRRGDSEGGVNRGIGPSRVSLLAP 316
Query: 56 ETTSSGMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRR 115
+ ++ L++ P RG+ PG P PR Q + + P T +
Sbjct: 317 D-------KKRLNNAP--------RGSAAPGPPRGPRLQ--GGGSLTLQPDYAKYATFKA 359
Query: 116 GSLGVAVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPG------WFRKSDRSGR 169
+L A + D A R PA+A PS P+ P W +
Sbjct: 360 AALKAAEAAPRDFCQRFPALEPSPRQPPARAPRPS----PDLPAPLDACPW-APPVYAPP 414
Query: 170 AGTGAWSQWPQANPDEQQP 188
A G ++ W + P P
Sbjct: 415 AAPGPYAAWTSSRPARPAP 433
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 32.7 bits (73), Expect = 0.19
Identities = 57/220 (25%), Positives = 74/220 (33%), Gaps = 54/220 (24%)
Query: 2 QRGPLSPSPSDGL----GALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPET 57
QR P SP G G T G G++ + P A +PS A+ P +
Sbjct: 119 QRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPAD---PGS 175
Query: 58 TSSGMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAP------------ 105
TSS + P A S+R P AP A R P
Sbjct: 176 TSSA------TRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGA 229
Query: 106 PRVPPRTPRR---GSLGVAVFSSSDLTFD-------AEAQGQVRRPRPAQAVGPSGARRP 155
PR+ RT +R GS +V S D+T A+ QV P + P R P
Sbjct: 230 PRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLP 289
Query: 156 E--------------APGWFRK-----SDRSGRAGTGAWS 176
+ P F + R GR GTG+WS
Sbjct: 290 DFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWS 329
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 32.7 bits (73), Expect = 0.19
Identities = 57/220 (25%), Positives = 74/220 (33%), Gaps = 54/220 (24%)
Query: 2 QRGPLSPSPSDGL----GALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPET 57
QR P SP G G T G G++ + P A +PS A+ P +
Sbjct: 119 QRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPAD---PGS 175
Query: 58 TSSGMHREPLSSTPIAHCESQRRGTTGPGMPCAPRAQRREAVGVLVAP------------ 105
TSS + P A S+R P AP A R P
Sbjct: 176 TSSA------TRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGA 229
Query: 106 PRVPPRTPRR---GSLGVAVFSSSDLTFD-------AEAQGQVRRPRPAQAVGPSGARRP 155
PR+ RT +R GS +V S D+T A+ QV P + P R P
Sbjct: 230 PRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLP 289
Query: 156 E--------------APGWFRK-----SDRSGRAGTGAWS 176
+ P F + R GR GTG+WS
Sbjct: 290 DFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWS 329
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 32.7 bits (73), Expect = 0.19
Identities = 45/196 (22%), Positives = 69/196 (35%), Gaps = 37/196 (18%)
Query: 7 SPSPSDGLGALGTTYPGVHRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSSGMHREP 66
S SP G G + P GQ L+ + PSR+ PE + +
Sbjct: 3707 SGSPRPGTKTGGGSQPQPASGQ----LQSETATTPAKPSFPSRSPA--PERLPARAQAKS 3760
Query: 67 LSSTPIAHCESQRRGTTGPG-------------MPCAPRAQRREAVGVLVAPPRVPPRTP 113
+ P E G+ GP +P R++ + G + P PPRTP
Sbjct: 3761 CTKGPREAGEQGPHGSLGPKEKGESSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTP 3820
Query: 114 RRGSLGVAVFSSSDLTFDAEAQGQVRRPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTG 173
R+ + V + +PRP P +R PG ++ DR G+A
Sbjct: 3821 RKQATPSRVLPTK------PKPNSQNKPRP-----PPSEQRKAEPGHTQRKDRLGKA--- 3866
Query: 174 AWSQWPQANPDEQQPQ 189
+PQ P + P+
Sbjct: 3867 ----FPQGRPLLRPPK 3878
Score = 28.9 bits (63), Expect = 2.8
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 77 SQRRGTTGPGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDLTFDAEAQG 136
SQ G+ PG +Q + A G L + P P S A L A+A+
Sbjct: 3704 SQGSGSPRPGTKTGGGSQPQPASGQLQSETATTPAKPSFPSRSPA---PERLPARAQAKS 3760
Query: 137 QVRRPRPAQAVGPSGARRPEAPGWFRKSDRSGRAGTGAWSQ 177
+ PR A GP G+ P+ G + G+ A S+
Sbjct: 3761 CTKGPREAGEQGPHGSLGPKEKGESSTKRKKGQVPGPARSE 3801
>gi|194272140 dendrin [Homo sapiens]
Length = 711
Score = 32.7 bits (73), Expect = 0.19
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 11/100 (11%)
Query: 94 QRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDLTFDAEAQGQV-RRPRPAQA------ 146
+RR+A G +PP P PR VA + E V R PRP+
Sbjct: 128 KRRKAGGARRSPPGRPRPEPRNAPR-VAQLAGLPAPLRPERLAPVGRAPRPSAQPQSDPG 186
Query: 147 ---VGPSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQANP 183
GP G RRP P + G AGT +W + P
Sbjct: 187 SAWAGPWGGRRPGPPSYEAHLLLRGSAGTAPRRRWDRPPP 226
>gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 32.3 bits (72), Expect = 0.25
Identities = 46/169 (27%), Positives = 58/169 (34%), Gaps = 27/169 (15%)
Query: 25 HRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSSGMHREPLSSTPIAHCESQRRGTTG 84
H GQ G R PA GL + P G H P S AH + G
Sbjct: 210 HPGQ---GGRAPAQAGGLCSAAPG------------GGHPAP-SWVAFAHTGAWGTGLPA 253
Query: 85 PGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDLTFDAEAQGQVRRPRPA 144
P +PCAP A + A V A P P + + + ++ A A+G PA
Sbjct: 254 PHVPCAPGALPQGAF-VSQAARAAPALQPSQAA------PAEGISQPAPARGDFAYAAPA 306
Query: 145 QAVG----PSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQANPDEQQPQ 189
G P R P PG R+ R G Q P + PQ
Sbjct: 307 PPDGALSHPQAPRWPPHPGKSREDRDPQRDGLPGPCAVAQPGPAQAGPQ 355
>gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 32.3 bits (72), Expect = 0.25
Identities = 46/169 (27%), Positives = 58/169 (34%), Gaps = 27/169 (15%)
Query: 25 HRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSSGMHREPLSSTPIAHCESQRRGTTG 84
H GQ G R PA GL + P G H P S AH + G
Sbjct: 210 HPGQ---GGRAPAQAGGLCSAAPG------------GGHPAP-SWVAFAHTGAWGTGLPA 253
Query: 85 PGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDLTFDAEAQGQVRRPRPA 144
P +PCAP A + A V A P P + + + ++ A A+G PA
Sbjct: 254 PHVPCAPGALPQGAF-VSQAARAAPALQPSQAA------PAEGISQPAPARGDFAYAAPA 306
Query: 145 QAVG----PSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQANPDEQQPQ 189
G P R P PG R+ R G Q P + PQ
Sbjct: 307 PPDGALSHPQAPRWPPHPGKSREDRDPQRDGLPGPCAVAQPGPAQAGPQ 355
>gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 32.3 bits (72), Expect = 0.25
Identities = 46/169 (27%), Positives = 58/169 (34%), Gaps = 27/169 (15%)
Query: 25 HRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSSGMHREPLSSTPIAHCESQRRGTTG 84
H GQ G R PA GL + P G H P S AH + G
Sbjct: 210 HPGQ---GGRAPAQAGGLCSAAPG------------GGHPAP-SWVAFAHTGAWGTGLPA 253
Query: 85 PGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDLTFDAEAQGQVRRPRPA 144
P +PCAP A + A V A P P + + + ++ A A+G PA
Sbjct: 254 PHVPCAPGALPQGAF-VSQAARAAPALQPSQAA------PAEGISQPAPARGDFAYAAPA 306
Query: 145 QAVG----PSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQANPDEQQPQ 189
G P R P PG R+ R G Q P + PQ
Sbjct: 307 PPDGALSHPQAPRWPPHPGKSREDRDPQRDGLPGPCAVAQPGPAQAGPQ 355
>gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 32.3 bits (72), Expect = 0.25
Identities = 46/169 (27%), Positives = 58/169 (34%), Gaps = 27/169 (15%)
Query: 25 HRGQSMAGLRVPAFNAGLRAITPSRAETQHPETTSSGMHREPLSSTPIAHCESQRRGTTG 84
H GQ G R PA GL + P G H P S AH + G
Sbjct: 210 HPGQ---GGRAPAQAGGLCSAAPG------------GGHPAP-SWVAFAHTGAWGTGLPA 253
Query: 85 PGMPCAPRAQRREAVGVLVAPPRVPPRTPRRGSLGVAVFSSSDLTFDAEAQGQVRRPRPA 144
P +PCAP A + A V A P P + + + ++ A A+G PA
Sbjct: 254 PHVPCAPGALPQGAF-VSQAARAAPALQPSQAA------PAEGISQPAPARGDFAYAAPA 306
Query: 145 QAVG----PSGARRPEAPGWFRKSDRSGRAGTGAWSQWPQANPDEQQPQ 189
G P R P PG R+ R G Q P + PQ
Sbjct: 307 PPDGALSHPQAPRWPPHPGKSREDRDPQRDGLPGPCAVAQPGPAQAGPQ 355
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,738,845
Number of Sequences: 37866
Number of extensions: 541895
Number of successful extensions: 2121
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 1986
Number of HSP's gapped (non-prelim): 307
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.