Search of human proteins with 239751502

Search of human proteins with 239751502

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751502 PREDICTED: hypothetical protein XP_002347876 [Homo
sapiens]
         (74 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751502 PREDICTED: hypothetical protein XP_002347876 [Homo ...   144   1e-35
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ...    91   3e-19
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ...    91   3e-19
gi|38202250 sulfatase modifying factor 1 [Homo sapiens]                33   0.065
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]            32   0.085
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]           32   0.085
gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]           32   0.085
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina...    32   0.085
gi|193290128 signal peptidase complex subunit 1 homolog [Homo sa...    27   3.6  
gi|239755333 PREDICTED: hypothetical protein [Homo sapiens]            27   4.7  
gi|169172231 PREDICTED: hypothetical protein [Homo sapiens]            26   6.1  
gi|169170975 PREDICTED: hypothetical protein [Homo sapiens]            26   6.1  
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]            26   7.9  
gi|33636717 hypothetical protein LOC80256 [Homo sapiens]               26   7.9  
gi|162809336 hypothetical protein LOC284611 [Homo sapiens]             26   7.9  

>gi|239751502 PREDICTED: hypothetical protein XP_002347876 [Homo
          sapiens]
          Length = 74

 Score =  144 bits (364), Expect = 1e-35
 Identities = 74/74 (100%), Positives = 74/74 (100%)

Query: 1  MTSSRALGSEEPKTGALAGPRALALGFAEAAAPGFRGSSNTARRRSIPVSLNRAQALCPP 60
          MTSSRALGSEEPKTGALAGPRALALGFAEAAAPGFRGSSNTARRRSIPVSLNRAQALCPP
Sbjct: 1  MTSSRALGSEEPKTGALAGPRALALGFAEAAAPGFRGSSNTARRRSIPVSLNRAQALCPP 60

Query: 61 QSTSLLVPSLQVPV 74
          QSTSLLVPSLQVPV
Sbjct: 61 QSTSLLVPSLQVPV 74


>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
           sapiens]
          Length = 459

 Score = 90.5 bits (223), Expect = 3e-19
 Identities = 45/49 (91%), Positives = 45/49 (91%)

Query: 26  GFAEAAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV 74
           G    AAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV
Sbjct: 411 GVRRGAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV 459


>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
           sapiens]
          Length = 459

 Score = 90.5 bits (223), Expect = 3e-19
 Identities = 45/49 (91%), Positives = 45/49 (91%)

Query: 26  GFAEAAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV 74
           G    AAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV
Sbjct: 411 GVRRGAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV 459


>gi|38202250 sulfatase modifying factor 1 [Homo sapiens]
          Length = 374

 Score = 32.7 bits (73), Expect = 0.065
 Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 6  ALGSEEPKTGALAGPRALALGFAEAAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSL 65
          A GS+E  TGA AG  A + G      PG  GSS  A R S       A A  P      
Sbjct: 31 AAGSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYS-----REANAPGPVPGERQ 85

Query: 66 LVPSLQVPV 74
          L  S  VP+
Sbjct: 86 LAHSKMVPI 94


>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 264

 Score = 32.3 bits (72), Expect = 0.085
 Identities = 30/75 (40%), Positives = 34/75 (45%), Gaps = 12/75 (16%)

Query: 5   RALGSEEPKTGALAGPRALALGFAEAAAPGFRGSSNTARRRSIPVSLNR------AQALC 58
           RA G    +TG   GPR LAL  A AAAP F  +S    RRS+P    R      A A C
Sbjct: 52  RAAGGRGRETGNAQGPR-LALQ-ARAAAPAFPAAS----RRSVPAPRGRRLLLPGAVAAC 105

Query: 59  PPQSTSLLVPSLQVP 73
                  L P L+ P
Sbjct: 106 AVSDGQPLSPPLRQP 120


>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
          Length = 317

 Score = 32.3 bits (72), Expect = 0.085
 Identities = 30/75 (40%), Positives = 34/75 (45%), Gaps = 12/75 (16%)

Query: 5   RALGSEEPKTGALAGPRALALGFAEAAAPGFRGSSNTARRRSIPVSLNR------AQALC 58
           RA G    +TG   GPR LAL  A AAAP F  +S    RRS+P    R      A A C
Sbjct: 46  RAAGGRGRETGNAQGPR-LALQ-ARAAAPAFPAAS----RRSVPAPRGRRLLLPGAVAAC 99

Query: 59  PPQSTSLLVPSLQVP 73
                  L P L+ P
Sbjct: 100 AVSDGQPLSPPLRQP 114


>gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
          Length = 317

 Score = 32.3 bits (72), Expect = 0.085
 Identities = 30/75 (40%), Positives = 34/75 (45%), Gaps = 12/75 (16%)

Query: 5   RALGSEEPKTGALAGPRALALGFAEAAAPGFRGSSNTARRRSIPVSLNR------AQALC 58
           RA G    +TG   GPR LAL  A AAAP F  +S    RRS+P    R      A A C
Sbjct: 46  RAAGGRGRETGNAQGPR-LALQ-ARAAAPAFPAAS----RRSVPAPRGRRLLLPGAVAAC 99

Query: 59  PPQSTSLLVPSLQVP 73
                  L P L+ P
Sbjct: 100 AVSDGQPLSPPLRQP 114


>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
           PRKX (Protein kinase PKX1) [Homo sapiens]
          Length = 330

 Score = 32.3 bits (72), Expect = 0.085
 Identities = 30/75 (40%), Positives = 34/75 (45%), Gaps = 12/75 (16%)

Query: 5   RALGSEEPKTGALAGPRALALGFAEAAAPGFRGSSNTARRRSIPVSLNR------AQALC 58
           RA G    +TG   GPR LAL  A AAAP F  +S    RRS+P    R      A A C
Sbjct: 59  RAAGGRGRETGNAQGPR-LALQ-ARAAAPAFPAAS----RRSVPAPRGRRLLLPGAVAAC 112

Query: 59  PPQSTSLLVPSLQVP 73
                  L P L+ P
Sbjct: 113 AVSDGQPLSPPLRQP 127


>gi|193290128 signal peptidase complex subunit 1 homolog [Homo
          sapiens]
          Length = 169

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 14 TGALAGPRALALGFAEAAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVP 73
          TG        A G A  A PG  G +  A+ +++P+++ ++++  P      L P+L  P
Sbjct: 7  TGCTGPSETSASGAAAIALPGLEGPATDAQCQTLPLTVLKSRSPSPRS----LPPALSCP 62


>gi|239755333 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 267

 Score = 26.6 bits (57), Expect = 4.7
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 14/52 (26%)

Query: 5   RALGSEEPKT-----GALAGPRALAL---------GFAEAAAPGFRGSSNTA 42
           R LG +EP+      G LAG   + L         GFA   AP + GS +TA
Sbjct: 122 RLLGLDEPRQVGQELGLLAGHHRIPLRLLQGQLPSGFAAPGAPAWSGSEDTA 173


>gi|169172231 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 15/30 (50%), Positives = 15/30 (50%)

Query: 16  ALAGPRALALGFAEAAAPGFRGSSNTARRR 45
           AL GPR  A G  EA A G R S   A  R
Sbjct: 103 ALCGPRGWAAGRGEAGATGLRLSVGAATVR 132


>gi|169170975 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 15/30 (50%), Positives = 15/30 (50%)

Query: 16  ALAGPRALALGFAEAAAPGFRGSSNTARRR 45
           AL GPR  A G  EA A G R S   A  R
Sbjct: 103 ALCGPRGWAAGRGEAGATGLRLSVGAATVR 132


>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 350

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 16/75 (21%)

Query: 5   RALGSEEPKTGALAGPRALALGFA----EAAAPGFR------GSSNTARRRS------IP 48
           R L     +TGALAG R  A   A    EAAAP  R      G S   + RS       P
Sbjct: 83  RVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRYP 142

Query: 49  VSLNRAQALCPPQST 63
            ++  A  L PP  T
Sbjct: 143 RAVPEATPLRPPPGT 157


>gi|33636717 hypothetical protein LOC80256 [Homo sapiens]
          Length = 538

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 7   LGSEEPKTGALAGPRALALGFAEAAAP-GFRGSSNTARRRSIPVSLNRA--QALCPPQST 63
           L  EEP T  L GP    LG   A+     RG     +R S+  S         CPP + 
Sbjct: 91  LPPEEPSTVGLLGPEGPGLGLGVASQHFSHRGLCVVEQRSSVTSSWTSGAWSPPCPPSNA 150

Query: 64  S 64
           S
Sbjct: 151 S 151


>gi|162809336 hypothetical protein LOC284611 [Homo sapiens]
          Length = 360

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 17  LAGPRALA-LGFAEAAAPGFRGSSNTARR 44
           L G +A A LGFA+     F GS NT RR
Sbjct: 88  LKGGKAYAKLGFADLNLAEFAGSGNTTRR 116


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.126    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,929,110
Number of Sequences: 37866
Number of extensions: 107421
Number of successful extensions: 302
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 295
Number of HSP's gapped (non-prelim): 15
length of query: 74
length of database: 18,247,518
effective HSP length: 46
effective length of query: 28
effective length of database: 16,505,682
effective search space: 462159096
effective search space used: 462159096
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.