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Search of human proteins with 239751251
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751251 PREDICTED: hypothetical protein [Homo sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751251 PREDICTED: hypothetical protein [Homo sapiens] 427 e-120
gi|239757991 PREDICTED: similar to inward rectifying K+ channel ... 186 2e-47
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 35 0.043
gi|4557853 transcription factor SOX9 [Homo sapiens] 34 0.096
gi|166064029 angiomotin isoform 1 [Homo sapiens] 32 0.28
gi|239754641 PREDICTED: hypothetical protein [Homo sapiens] 32 0.36
gi|239749183 PREDICTED: hypothetical protein XP_002346949 [Homo ... 32 0.36
gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo ... 32 0.36
gi|239743263 PREDICTED: hypothetical protein XP_002342813 [Homo ... 32 0.36
gi|239508944 PREDICTED: hypothetical protein [Homo sapiens] 32 0.36
gi|95147559 ankyrin repeat domain 43 [Homo sapiens] 32 0.47
gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo sapi... 31 0.62
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 31 0.62
gi|6912458 calcineurin binding protein 1 [Homo sapiens] 31 0.62
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 31 0.81
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 30 1.1
gi|239735519 SET binding factor 1 [Homo sapiens] 30 1.4
gi|169204928 PREDICTED: hypothetical protein [Homo sapiens] 30 1.4
gi|239753743 PREDICTED: hypothetical protein [Homo sapiens] 30 1.4
gi|113423861 PREDICTED: hypothetical protein [Homo sapiens] 30 1.4
gi|239748232 PREDICTED: hypothetical protein XP_002346598 [Homo ... 30 1.4
gi|113423437 PREDICTED: hypothetical protein [Homo sapiens] 30 1.4
gi|239742133 PREDICTED: hypothetical protein XP_002342440 [Homo ... 30 1.4
gi|4501913 ADAM metallopeptidase domain 23 preproprotein [Homo s... 30 1.4
gi|150170670 piccolo isoform 2 [Homo sapiens] 30 1.4
gi|150378539 piccolo isoform 1 [Homo sapiens] 30 1.4
gi|239755342 PREDICTED: hypothetical protein [Homo sapiens] 30 1.8
gi|239749829 PREDICTED: hypothetical protein XP_002347170 [Homo ... 30 1.8
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 30 1.8
gi|239744119 PREDICTED: hypothetical protein XP_002343063 [Homo ... 30 1.8
>gi|239751251 PREDICTED: hypothetical protein [Homo sapiens]
Length = 201
Score = 427 bits (1099), Expect = e-120
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MFEGHGLAWWTEARSGVPSPGRDARSCGSTLTSLVAGQFRGRQLLEAHADRALWPLILVI 60
MFEGHGLAWWTEARSGVPSPGRDARSCGSTLTSLVAGQFRGRQLLEAHADRALWPLILVI
Sbjct: 1 MFEGHGLAWWTEARSGVPSPGRDARSCGSTLTSLVAGQFRGRQLLEAHADRALWPLILVI 60
Query: 61 LSLAGFELLGAGAGAAMTRWKSLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGA 120
LSLAGFELLGAGAGAAMTRWKSLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGA
Sbjct: 61 LSLAGFELLGAGAGAAMTRWKSLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGA 120
Query: 121 EPPSQHSLRGAPCRRLPTSWPRQKQCPPFQPCVPAPQRHGEVVSRSGVGGRWQSKERHPC 180
EPPSQHSLRGAPCRRLPTSWPRQKQCPPFQPCVPAPQRHGEVVSRSGVGGRWQSKERHPC
Sbjct: 121 EPPSQHSLRGAPCRRLPTSWPRQKQCPPFQPCVPAPQRHGEVVSRSGVGGRWQSKERHPC 180
Query: 181 RAWGPMVGDCTRGGLKLNSPA 201
RAWGPMVGDCTRGGLKLNSPA
Sbjct: 181 RAWGPMVGDCTRGGLKLNSPA 201
>gi|239757991 PREDICTED: similar to inward rectifying K+ channel
negative regulator Kir2.2v isoform 2 [Homo sapiens]
Length = 534
Score = 186 bits (471), Expect = 2e-47
Identities = 84/93 (90%), Positives = 87/93 (93%)
Query: 77 MTRWKSLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQHSLRGAPCRRL 136
MTRWKSLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQHSLRGAPC RL
Sbjct: 1 MTRWKSLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQHSLRGAPCLRL 60
Query: 137 PTSWPRQKQCPPFQPCVPAPQRHGEVVSRSGVG 169
PTSWPRQKQCPPFQPCVPAPQRHG + + +G
Sbjct: 61 PTSWPRQKQCPPFQPCVPAPQRHGAALPGASLG 93
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 35.0 bits (79), Expect = 0.043
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 14/94 (14%)
Query: 86 PGPHKSSPCQLVAS-------RQCLSAPALAASFWRVQESGAEPPSQHSLRGAPCRRLPT 138
P P + +P LV S Q PA+ AS W+ G PP + AP R+ P
Sbjct: 396 PPPCQKAPSGLVTSCKAPFLVDQSQKLPAVPASSWK-PPPGLAPPQKAPAASAPPRKAPA 454
Query: 139 SWPRQKQCP----PFQ--PCVPAPQRHGEVVSRS 166
++ P P Q P +PAP R S S
Sbjct: 455 VPAPSQKAPAVPAPSQKAPAIPAPSRKASAASAS 488
>gi|4557853 transcription factor SOX9 [Homo sapiens]
Length = 509
Score = 33.9 bits (76), Expect = 0.096
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 104 SAPALAASFWRVQESGAEPPSQHSLRGAPCRRLPTSWPRQKQCPPFQPCVP--APQRHGE 161
+ PA A W ++ PP Q + P + P P+ + PP QP P PQ H
Sbjct: 326 ATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQAP---PQPQAAPPQQPAAPPQQPQAHTL 382
Query: 162 VVSRSGVGGRWQSKERH 178
S G QS+ H
Sbjct: 383 TTLSSEPG---QSQRTH 396
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 32.3 bits (72), Expect = 0.28
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 83 LKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQHSLRGAPCRRLPTSWPR 142
+KA P S+P P ++ F++ Q P+QHSL+G R P +P
Sbjct: 188 VKAHPPVTSAPLSPPQPNDLYKNPTSSSEFYKAQ---GPLPNQHSLKGMEHRGPPPEYPF 244
Query: 143 QKQCPPFQPCVPAPQRHGEVVSRSGVGGRWQS---KERHP 179
+ P C P H R GR + + +HP
Sbjct: 245 KGMPPQSVVCKPQEPGHFYSEHRLNQPGRTEGQLMRYQHP 284
>gi|239754641 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 32.0 bits (71), Expect = 0.36
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 104 SAPALAASFWRVQES------GAEPPSQHSLRGAPCRRLPTSWPRQKQCPPFQPCVPAPQ 157
S PAL +S WR S + P + R AP W + PP +P P +
Sbjct: 95 SPPALPSSTWRTTWSCIRCRWASGPAAWWPARAAPAGAETREWRTVARPPPGRPATPGDR 154
Query: 158 RHGEVVSRS---GVGGRWQ 173
+ GE V GRW+
Sbjct: 155 KSGESVGTELPVKGPGRWR 173
>gi|239749183 PREDICTED: hypothetical protein XP_002346949 [Homo
sapiens]
Length = 229
Score = 32.0 bits (71), Expect = 0.36
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 104 SAPALAASFWRVQES------GAEPPSQHSLRGAPCRRLPTSWPRQKQCPPFQPCVPAPQ 157
S PAL +S WR S + P + R AP W + PP +P P +
Sbjct: 95 SPPALPSSTWRTTWSCIRCRWASGPAAWWPARAAPAGAETREWRTVARPPPGRPATPGDR 154
Query: 158 RHGEVVSRS---GVGGRWQ 173
+ GE V GRW+
Sbjct: 155 KSGESVGTELPVKGPGRWR 173
>gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo
sapiens]
Length = 279
Score = 32.0 bits (71), Expect = 0.36
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 122 PPSQHSLRGAPCRRLPTSWPRQKQCPP-------FQPCVPAPQRHGEVVSRSG 167
P H + P P SWP++ Q P +P V P+R +VSR+G
Sbjct: 41 PGDDHETQHPPSSSRPLSWPQKAQHPMGPEESGVLEPLVGLPRRRSGLVSRAG 93
>gi|239743263 PREDICTED: hypothetical protein XP_002342813 [Homo
sapiens]
Length = 229
Score = 32.0 bits (71), Expect = 0.36
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 104 SAPALAASFWRVQES------GAEPPSQHSLRGAPCRRLPTSWPRQKQCPPFQPCVPAPQ 157
S PAL +S WR S + P + R AP W + PP +P P +
Sbjct: 95 SPPALPSSTWRTTWSCIRCRWASGPAAWWPARAAPAGAETREWRTVARPPPGRPATPGDR 154
Query: 158 RHGEVVSRS---GVGGRWQ 173
+ GE V GRW+
Sbjct: 155 KSGESVGTELPVKGPGRWR 173
>gi|239508944 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 32.0 bits (71), Expect = 0.36
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 104 SAPALAASFWRVQES------GAEPPSQHSLRGAPCRRLPTSWPRQKQCPPFQPCVPAPQ 157
S PAL +S WR S + P + R AP W + PP +P P +
Sbjct: 95 SPPALPSSTWRTTWSCIRCRWASGPAAWWPARAAPAGAETREWRTVARPPPGRPATPGDR 154
Query: 158 RHGEVVSRS---GVGGRWQ 173
+ GE V GRW+
Sbjct: 155 KSGESVGTELPVKGPGRWR 173
>gi|95147559 ankyrin repeat domain 43 [Homo sapiens]
Length = 549
Score = 31.6 bits (70), Expect = 0.47
Identities = 27/83 (32%), Positives = 31/83 (37%), Gaps = 12/83 (14%)
Query: 86 PGPHKSSPCQLVASRQC---LSAPALAASFWRVQESGAEPPSQHSLRGAPCRRLPTSWP- 141
PG S P Q R L A LA + R A PP S +PC P + P
Sbjct: 145 PGGPASEPAQPPGERSADPPLPALELAQATERPSADAAPPPRAPSEAASPCSDPPDAEPG 204
Query: 142 --------RQKQCPPFQPCVPAP 156
+QK C CVPAP
Sbjct: 205 PGAAKGPPQQKPCMLPVRCVPAP 227
>gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo
sapiens]
Length = 520
Score = 31.2 bits (69), Expect = 0.62
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 84 KAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQHSLRGAPCRRLPTSWPRQ 143
++P P SP PA A S +P Q L AP +P P +
Sbjct: 291 QSPSPGSQSPV----------VPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSE 340
Query: 144 KQCPPFQPCVPAPQRHGEVVSR 165
PP P PAP+R ++SR
Sbjct: 341 ALPPPACPSAPAPRR--SIISR 360
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 31.2 bits (69), Expect = 0.62
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 84 KAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQHSLRGAPCRRLPTSWPRQ 143
++P P SP PA A S +P Q L AP +P P +
Sbjct: 291 QSPSPGSQSPV----------VPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSE 340
Query: 144 KQCPPFQPCVPAPQRHGEVVSR 165
PP P PAP+R ++SR
Sbjct: 341 ALPPPACPSAPAPRR--SIISR 360
>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
Length = 2220
Score = 31.2 bits (69), Expect = 0.62
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 69 LGAGAGAAMTRWKSLKAPGPHKSSPCQLVASR-QCLSAPALAASFWRVQESGAEPPSQHS 127
LG GA ++ L+ P P + Q AS Q LS+P AAS A+PP H
Sbjct: 2058 LGTGAEPTCSQEGKLR-PEPRRDGEAQEAASETQPLSSPPTAASSKAPSSGSAQPPEGHP 2116
Query: 128 LRGAPCR 134
+ P R
Sbjct: 2117 GKPEPSR 2123
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 30.8 bits (68), Expect = 0.81
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 118 SGAEPPSQHSLRGAPCRRLPTSWPRQKQCPPFQPC-VPAPQRHGEV 162
SG + S S R +P + P+ P + PP PC P PQR V
Sbjct: 329 SGGQRHSPLSQRHSPAPQCPSPSPPARAAPPCPPCQSPVPQRRSPV 374
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 30.4 bits (67), Expect = 1.1
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 87 GPHKSSPCQLVASRQCLSA-PALAASFWRVQESGAEPPSQHSLRGAPCRRLPTSWPRQKQ 145
GP P +L A LS P L S + P + S +P +LPT + Q
Sbjct: 4280 GPRPQGPPRLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPT----EAQ 4335
Query: 146 CPPFQPCVPAPQ 157
PP P P PQ
Sbjct: 4336 LPPTHPGTPKPQ 4347
>gi|239735519 SET binding factor 1 [Homo sapiens]
Length = 1893
Score = 30.0 bits (66), Expect = 1.4
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 113 WRVQESGAEPPSQH-SLRGAPCRRLPTSWPRQKQCPPFQP 151
W + + EPP + S GAP R WP CP QP
Sbjct: 1634 WELAQGPPEPPEEERSDGGAPQSRRRVVWPCYDSCPRAQP 1673
>gi|169204928 PREDICTED: hypothetical protein [Homo sapiens]
Length = 215
Score = 30.0 bits (66), Expect = 1.4
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 80 WKSLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQHSLRGAPCRRLPTS 139
W+ + PG + P Q+ +R ++PA + + A P + P +
Sbjct: 81 WRGM-GPGAVREGP-QVKGAR---TSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRA 135
Query: 140 WPRQKQCPPFQPCVPAPQRHGEVVSRSG---------VGGRWQSKERHPCRA 182
WP PP P PAP RHG R+ G RW+ + + +A
Sbjct: 136 WPP----PPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQAKA 183
>gi|239753743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 30.0 bits (66), Expect = 1.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 160 GEVVSRSGVGGRWQSKERHPCRAWGPMVGDCTRGGLKL 197
G+VVSR+G +S E PC+ W P G L
Sbjct: 120 GKVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDL 157
>gi|113423861 PREDICTED: hypothetical protein [Homo sapiens]
Length = 215
Score = 30.0 bits (66), Expect = 1.4
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 80 WKSLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQHSLRGAPCRRLPTS 139
W+ + PG + P Q+ +R ++PA + + A P + P +
Sbjct: 81 WRGM-GPGAVREGP-QVKGAR---TSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRA 135
Query: 140 WPRQKQCPPFQPCVPAPQRHGEVVSRSG---------VGGRWQSKERHPCRA 182
WP PP P PAP RHG R+ G RW+ + + +A
Sbjct: 136 WPP----PPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQAKA 183
>gi|239748232 PREDICTED: hypothetical protein XP_002346598 [Homo
sapiens]
Length = 175
Score = 30.0 bits (66), Expect = 1.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 160 GEVVSRSGVGGRWQSKERHPCRAWGPMVGDCTRGGLKL 197
G+VVSR+G +S E PC+ W P G L
Sbjct: 120 GKVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDL 157
>gi|113423437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 215
Score = 30.0 bits (66), Expect = 1.4
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 80 WKSLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQHSLRGAPCRRLPTS 139
W+ + PG + P Q+ +R ++PA + + A P + P +
Sbjct: 81 WRGM-GPGAVREGP-QVKGAR---TSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRA 135
Query: 140 WPRQKQCPPFQPCVPAPQRHGEVVSRSG---------VGGRWQSKERHPCRA 182
WP PP P PAP RHG R+ G RW+ + + +A
Sbjct: 136 WPP----PPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQAKA 183
>gi|239742133 PREDICTED: hypothetical protein XP_002342440 [Homo
sapiens]
Length = 175
Score = 30.0 bits (66), Expect = 1.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 160 GEVVSRSGVGGRWQSKERHPCRAWGPMVGDCTRGGLKL 197
G+VVSR+G +S E PC+ W P G L
Sbjct: 120 GKVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDL 157
>gi|4501913 ADAM metallopeptidase domain 23 preproprotein [Homo
sapiens]
Length = 832
Score = 30.0 bits (66), Expect = 1.4
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 63 LAGFELLGAGAGAAMTRWKSLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEP 122
LAG L GA G S+ A P ++ PC+L+ L P LAAS R + GA
Sbjct: 13 LAGCSLAGASCGPQRGPAGSVPASAPARTPPCRLLL--VLLLLPPLAASS-RPRAWGAAA 69
Query: 123 PS 124
PS
Sbjct: 70 PS 71
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 30.0 bits (66), Expect = 1.4
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 82 SLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPP--SQHSLRGAP---CRRL 136
S +P P ++SP + A +Q LS + E PP Q +L G+P ++
Sbjct: 673 SKSSPQPQQTSPKKDAAPKQDLS---------KAPEPKKPPPLVKQPTLHGSPSAKAKQP 723
Query: 137 PTSWPRQKQCPPFQPCVPAPQ 157
P + K PP +P VP+ Q
Sbjct: 724 PEADSLSKPAPPKEPSVPSEQ 744
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 30.0 bits (66), Expect = 1.4
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 82 SLKAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPP--SQHSLRGAP---CRRL 136
S +P P ++SP + A +Q LS + E PP Q +L G+P ++
Sbjct: 673 SKSSPQPQQTSPKKDAAPKQDLS---------KAPEPKKPPPLVKQPTLHGSPSAKAKQP 723
Query: 137 PTSWPRQKQCPPFQPCVPAPQ 157
P + K PP +P VP+ Q
Sbjct: 724 PEADSLSKPAPPKEPSVPSEQ 744
>gi|239755342 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 29.6 bits (65), Expect = 1.8
Identities = 32/136 (23%), Positives = 45/136 (33%), Gaps = 39/136 (28%)
Query: 28 GSTLTSLVAGQFRGRQLLEAHADRALWPLILVILSLAGFELLGAGAGAAMTRWKSL---- 83
G +T +V G+ R ++ ADR ++LGAG GA WK L
Sbjct: 88 GRKITEVVVGRCPCRPGVKGLADR--------------LKMLGAGVGAPPPGWKGLGLAT 133
Query: 84 ------------------KAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQ 125
G + SP + A S+ L ++ WR P +
Sbjct: 134 GAGKGLGGSTAASGGALWARGGDCRPSPLSMAAGSTRASSWVLESARWRCCSKSCTPRPE 193
Query: 126 HSLRGAPCRRLPTSWP 141
SL C P WP
Sbjct: 194 TSL---SCPPSPEPWP 206
>gi|239749829 PREDICTED: hypothetical protein XP_002347170 [Homo
sapiens]
Length = 220
Score = 29.6 bits (65), Expect = 1.8
Identities = 32/136 (23%), Positives = 45/136 (33%), Gaps = 39/136 (28%)
Query: 28 GSTLTSLVAGQFRGRQLLEAHADRALWPLILVILSLAGFELLGAGAGAAMTRWKSL---- 83
G +T +V G+ R ++ ADR ++LGAG GA WK L
Sbjct: 88 GRKITEVVVGRCPCRPGVKGLADR--------------LKMLGAGVGAPPPGWKGLGLAT 133
Query: 84 ------------------KAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQ 125
G + SP + A S+ L ++ WR P +
Sbjct: 134 GAGKGLGGSTAASGGALWARGGDCRPSPLSMAAGSTRASSWVLESARWRCCSKSCTPRPE 193
Query: 126 HSLRGAPCRRLPTSWP 141
SL C P WP
Sbjct: 194 TSL---SCPPSPEPWP 206
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 29.6 bits (65), Expect = 1.8
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 6/103 (5%)
Query: 71 AGAGAAMTRWKSLKAPGPH---KSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQHS 127
A A A+ R + PG K SP L+AP W +E P
Sbjct: 69 ASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPC--- 125
Query: 128 LRGAPCRRLPTSWPRQKQCPPFQPCVPAPQRHGEVVSRSGVGG 170
L GA R S R P + C P P R G +R G
Sbjct: 126 LPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAG 168
>gi|239744119 PREDICTED: hypothetical protein XP_002343063 [Homo
sapiens]
Length = 220
Score = 29.6 bits (65), Expect = 1.8
Identities = 32/136 (23%), Positives = 45/136 (33%), Gaps = 39/136 (28%)
Query: 28 GSTLTSLVAGQFRGRQLLEAHADRALWPLILVILSLAGFELLGAGAGAAMTRWKSL---- 83
G +T +V G+ R ++ ADR ++LGAG GA WK L
Sbjct: 88 GRKITEVVVGRCPCRPGVKGLADR--------------LKMLGAGVGAPPPGWKGLGLAT 133
Query: 84 ------------------KAPGPHKSSPCQLVASRQCLSAPALAASFWRVQESGAEPPSQ 125
G + SP + A S+ L ++ WR P +
Sbjct: 134 GAGKGLGGSTAASGGALWARGGDCRPSPLSMAAGSTRASSWVLESARWRCCSKSCTPRPE 193
Query: 126 HSLRGAPCRRLPTSWP 141
SL C P WP
Sbjct: 194 TSL---SCPPSPEPWP 206
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,803,878
Number of Sequences: 37866
Number of extensions: 510329
Number of successful extensions: 1644
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 1620
Number of HSP's gapped (non-prelim): 85
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.