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Search of human proteins with 239750097
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750097 PREDICTED: hypothetical protein XP_002347291 [Homo
sapiens]
(143 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750097 PREDICTED: hypothetical protein XP_002347291 [Homo ... 293 4e-80
gi|239755591 PREDICTED: similar to Putative ubiquitin-like prote... 198 1e-51
gi|4503659 ubiquitin-like protein fubi and ribosomal protein S30... 117 3e-27
gi|11024714 ubiquitin B precursor [Homo sapiens] 40 5e-04
gi|208022622 ubiquitin and ribosomal protein S27a precursor [Hom... 40 5e-04
gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo ... 40 5e-04
gi|67191208 ubiquitin C [Homo sapiens] 40 5e-04
gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo s... 40 5e-04
gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo ... 40 5e-04
gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens] 39 0.001
gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens] 39 0.001
gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens] 39 0.001
gi|4826774 ISG15 ubiquitin-like modifier [Homo sapiens] 37 0.006
gi|222352096 ubiquitin D [Homo sapiens] 34 0.048
gi|122937478 arrestin domain containing 5 [Homo sapiens] 30 0.90
gi|50811889 centrosomal protein 192kDa [Homo sapiens] 29 1.2
gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens] 28 2.6
gi|13173471 transmembrane protease, serine 3 isoform 1 [Homo sap... 27 4.4
gi|14602457 transmembrane protease, serine 3 isoform 3 [Homo sap... 27 4.4
gi|221316624 dystonin isoform 4 [Homo sapiens] 27 5.8
gi|221316622 dystonin isoform 3 [Homo sapiens] 27 5.8
gi|221316618 dystonin isoform 2 [Homo sapiens] 27 5.8
gi|34577047 dystonin isoform 1 [Homo sapiens] 27 5.8
gi|4503657 forkhead box H1 [Homo sapiens] 27 7.6
gi|239753867 PREDICTED: hypothetical protein [Homo sapiens] 26 9.9
gi|239748428 PREDICTED: hypothetical protein XP_002346657 [Homo ... 26 9.9
gi|239742361 PREDICTED: hypothetical protein XP_002342502 [Homo ... 26 9.9
gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens] 26 9.9
gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens] 26 9.9
>gi|239750097 PREDICTED: hypothetical protein XP_002347291 [Homo
sapiens]
Length = 143
Score = 293 bits (749), Expect = 4e-80
Identities = 143/143 (100%), Positives = 143/143 (100%)
Query: 1 MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI 60
MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI
Sbjct: 1 MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI 60
Query: 61 PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGGEWGYRGPKLVSRGNSRHLDLL 120
PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGGEWGYRGPKLVSRGNSRHLDLL
Sbjct: 61 PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGGEWGYRGPKLVSRGNSRHLDLL 120
Query: 121 GLPCTVCYFFFSFFFSSQCLKVS 143
GLPCTVCYFFFSFFFSSQCLKVS
Sbjct: 121 GLPCTVCYFFFSFFFSSQCLKVS 143
>gi|239755591 PREDICTED: similar to Putative ubiquitin-like
protein FUBI-like protein ENSP00000310146 [Homo
sapiens]
Length = 137
Score = 198 bits (503), Expect = 1e-51
Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 1 MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI 60
MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI
Sbjct: 1 MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI 60
Query: 61 PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGG 99
PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGG
Sbjct: 61 PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGG 99
>gi|4503659 ubiquitin-like protein fubi and ribosomal protein S30
precursor [Homo sapiens]
Length = 133
Score = 117 bits (294), Expect = 3e-27
Identities = 58/72 (80%), Positives = 66/72 (91%)
Query: 29 YVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALT 88
+VRA+ELHT EVTG ETVAQ KAHVASLEG+ PED+VVLLAG+PL++EATLGQCGVEALT
Sbjct: 4 FVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALT 63
Query: 89 TLEVVGRRLGGE 100
TLEV GR LGG+
Sbjct: 64 TLEVAGRMLGGK 75
>gi|11024714 ubiquitin B precursor [Homo sapiens]
Length = 229
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 90 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 149
Query: 97 LGG 99
GG
Sbjct: 150 RGG 152
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 225
Query: 97 LGG 99
GG
Sbjct: 226 RGG 228
>gi|208022622 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
>gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
>gi|67191208 ubiquitin C [Homo sapiens]
Length = 685
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 90 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 149
Query: 97 LGG 99
GG
Sbjct: 150 RGG 152
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 242 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 301
Query: 97 LGG 99
GG
Sbjct: 302 RGG 304
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 318 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 377
Query: 97 LGG 99
GG
Sbjct: 378 RGG 380
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 453
Query: 97 LGG 99
GG
Sbjct: 454 RGG 456
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 470 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 529
Query: 97 LGG 99
GG
Sbjct: 530 RGG 532
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 546 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 605
Query: 97 LGG 99
GG
Sbjct: 606 RGG 608
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 681
Query: 97 LGG 99
GG
Sbjct: 682 RGG 684
Score = 37.4 bits (85), Expect = 0.004
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ + + ++ AG L++ TL ++ +TL +V R
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 225
Query: 97 LGG 99
GG
Sbjct: 226 RGG 228
>gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo
sapiens]
Length = 128
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
>gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo
sapiens]
Length = 128
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
>gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 8 WRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVL 67
WRG+ AA L V +R + + TLEV + + KA + EG+ P+ + ++
Sbjct: 55 WRGSPVPQSAAATKLQI-FVKTLRGKTI-TLEVEPSDAIENVKAKIQDKEGIPPDQQRLI 112
Query: 68 LAGSPLQNEATLGQCGVEALTTLEVVGRRLG 98
AG L++ TL C ++ TL ++ R G
Sbjct: 113 FAGKQLEDGRTLSDCNIQKEPTLHLLLRLCG 143
>gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 8 WRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVL 67
WRG+ AA L V +R + + TLEV + + KA + EG+ P+ + ++
Sbjct: 55 WRGSPVPQSAAATKLQI-FVKTLRGKTI-TLEVEPSDAIENVKAKIQDKEGIPPDQQRLI 112
Query: 68 LAGSPLQNEATLGQCGVEALTTLEVVGRRLG 98
AG L++ TL C ++ TL ++ R G
Sbjct: 113 FAGKQLEDGRTLSDCNIQKEPTLHLLLRLCG 143
>gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 8 WRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVL 67
WRG+ AA L V +R + + TLEV + + KA + EG+ P+ + ++
Sbjct: 55 WRGSPVPQSAAATKLQI-FVKTLRGKTI-TLEVEPSDAIENVKAKIQDKEGIPPDQQRLI 112
Query: 68 LAGSPLQNEATLGQCGVEALTTLEVVGRRLG 98
AG L++ TL C ++ TL ++ R G
Sbjct: 113 FAGKQLEDGRTLSDCNIQKEPTLHLLLRLCG 143
>gi|4826774 ISG15 ubiquitin-like modifier [Homo sapiens]
Length = 165
Score = 37.0 bits (84), Expect = 0.006
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
T EV +TVA K V+ LEG+ + + G PL+++ LG+ G++ L+T+ + R
Sbjct: 95 TYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRL 154
Query: 97 LGG 99
GG
Sbjct: 155 RGG 157
>gi|222352096 ubiquitin D [Homo sapiens]
Length = 165
Score = 33.9 bits (76), Expect = 0.048
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 36 HTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGR 95
H L+V +VAQ KA + + G+IPE ++V G L++ + G+ L +
Sbjct: 102 HLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACY 161
Query: 96 RLGG 99
+GG
Sbjct: 162 CIGG 165
Score = 30.8 bits (68), Expect = 0.40
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 17 AADLSLLCPQVAYVRARE--LHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQ 74
A + S LC +VR+ E L T + ++V + K HV S + +D+V+LL L+
Sbjct: 2 APNASCLC---VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILK 58
Query: 75 NEATLGQCGVEALTTLEV 92
+L G++ T+ +
Sbjct: 59 PRRSLSSYGIDKEKTIHL 76
>gi|122937478 arrestin domain containing 5 [Homo sapiens]
Length = 342
Score = 29.6 bits (65), Expect = 0.90
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 43 LETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEA--TLGQCGVEALTTLEVVGR 95
L T + V S+E ++PED+ + LAGS ++ + TL V+ + +E+VGR
Sbjct: 8 LSTPQPPMSVVKSIELVLPEDR-IYLAGSSIKGQVILTLNSTLVDPIVKVELVGR 61
>gi|50811889 centrosomal protein 192kDa [Homo sapiens]
Length = 1941
Score = 29.3 bits (64), Expect = 1.2
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 10/69 (14%)
Query: 33 RELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEV 92
R L TL TG T+ Q A A++ G +AG P+QN +G C
Sbjct: 668 RYLGTLPSTGSTTLPQCHAGNATVCGFSGGLPYPAVAGEPVQNSVAVGIC---------- 717
Query: 93 VGRRLGGEW 101
+G +G W
Sbjct: 718 LGSNIGSGW 726
>gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens]
Length = 1012
Score = 28.1 bits (61), Expect = 2.6
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 35 LHTLEVTGLETVAQSKAHVASLEGLIPEDKVVL-LAGSPLQNEATL 79
+HT G+E + H ++ L+ ED V +AG LQN+A L
Sbjct: 391 VHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVL 436
>gi|13173471 transmembrane protease, serine 3 isoform 1 [Homo
sapiens]
Length = 454
Score = 27.3 bits (59), Expect = 4.4
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 12 WRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGS 71
W+G A ++ C Q+ + L V+ LE Q + S++ L+P+DKV L S
Sbjct: 133 WKGHYA---NVACAQLGFPSYVSSDNLRVSSLE--GQFREEFVSIDHLLPDDKVTALHHS 187
Query: 72 PLQNEATLGQCGVEALTTLE--VVGRRLG 98
E C + TL+ G R G
Sbjct: 188 VYVREG----CASGHVVTLQCTACGHRRG 212
>gi|14602457 transmembrane protease, serine 3 isoform 3 [Homo
sapiens]
Length = 344
Score = 27.3 bits (59), Expect = 4.4
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 12 WRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGS 71
W+G A ++ C Q+ + L V+ LE Q + S++ L+P+DKV L S
Sbjct: 133 WKGHYA---NVACAQLGFPSYVSSDNLRVSSLE--GQFREEFVSIDHLLPDDKVTALHHS 187
Query: 72 PLQNEATLGQCGVEALTTLE--VVGRRLG 98
E C + TL+ G R G
Sbjct: 188 VYVREG----CASGHVVTLQCTACGHRRG 212
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 26.9 bits (58), Expect = 5.8
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 39 EVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVG 94
EV LE + Q A+ + +I EDK++L AG+ LQ+++ + GV+ E+ G
Sbjct: 408 EVERLEMLQQI-ANRVQRDSVICEDKLIL-AGNALQSDSKRLESGVQFQNEAEIAG 461
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 26.9 bits (58), Expect = 5.8
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 39 EVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVG 94
EV LE + Q A+ + +I EDK++L AG+ LQ+++ + GV+ E+ G
Sbjct: 419 EVERLEMLQQI-ANRVQRDSVICEDKLIL-AGNALQSDSKRLESGVQFQNEAEIAG 472
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 26.9 bits (58), Expect = 5.8
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 39 EVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVG 94
EV LE + Q A+ + +I EDK++L AG+ LQ+++ + GV+ E+ G
Sbjct: 557 EVERLEMLQQI-ANRVQRDSVICEDKLIL-AGNALQSDSKRLESGVQFQNEAEIAG 610
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 26.9 bits (58), Expect = 5.8
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 39 EVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVG 94
EV LE + Q A+ + +I EDK++L AG+ LQ+++ + GV+ E+ G
Sbjct: 379 EVERLEMLQQI-ANRVQRDSVICEDKLIL-AGNALQSDSKRLESGVQFQNEAEIAG 432
>gi|4503657 forkhead box H1 [Homo sapiens]
Length = 365
Score = 26.6 bits (57), Expect = 7.6
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 15 GGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIP 61
GGA S L P+ RA LH L+ T + S H ASL G +P
Sbjct: 235 GGAIGPSTLSPEP---RAWPLHLLQGTAVPGGRSSGGHRASLWGQLP 278
>gi|239753867 PREDICTED: hypothetical protein [Homo sapiens]
Length = 215
Score = 26.2 bits (56), Expect = 9.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 2 RGRRRAWRGAWRGGGAADLS 21
RGRR A W GGGAA L+
Sbjct: 41 RGRREAQGARWPGGGAALLA 60
>gi|239748428 PREDICTED: hypothetical protein XP_002346657 [Homo
sapiens]
Length = 215
Score = 26.2 bits (56), Expect = 9.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 2 RGRRRAWRGAWRGGGAADLS 21
RGRR A W GGGAA L+
Sbjct: 41 RGRREAQGARWPGGGAALLA 60
>gi|239742361 PREDICTED: hypothetical protein XP_002342502 [Homo
sapiens]
Length = 215
Score = 26.2 bits (56), Expect = 9.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 2 RGRRRAWRGAWRGGGAADLS 21
RGRR A W GGGAA L+
Sbjct: 41 RGRREAQGARWPGGGAALLA 60
>gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens]
Length = 727
Score = 26.2 bits (56), Expect = 9.9
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 38 LEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRL 97
L V+ ETV KA + LEG+ + ++ L+N+ L + TL++V
Sbjct: 42 LRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMR 101
Query: 98 GG 99
GG
Sbjct: 102 GG 103
>gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens]
Length = 727
Score = 26.2 bits (56), Expect = 9.9
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 38 LEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRL 97
L V+ ETV KA + LEG+ + ++ L+N+ L + TL++V
Sbjct: 42 LRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMR 101
Query: 98 GG 99
GG
Sbjct: 102 GG 103
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,320,193
Number of Sequences: 37866
Number of extensions: 198200
Number of successful extensions: 583
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 554
Number of HSP's gapped (non-prelim): 40
length of query: 143
length of database: 18,247,518
effective HSP length: 92
effective length of query: 51
effective length of database: 14,763,846
effective search space: 752956146
effective search space used: 752956146
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.