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Search of human proteins with 239749902
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749902 PREDICTED: similar to hCG2040253 [Homo sapiens]
(251 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749902 PREDICTED: similar to hCG2040253 [Homo sapiens] 516 e-147
gi|239744202 PREDICTED: similar to hCG2040253 [Homo sapiens] 514 e-146
gi|13491174 MARCKS-like 1 [Homo sapiens] 140 1e-33
gi|153070260 myristoylated alanine-rich protein kinase C substra... 53 3e-07
gi|30089948 protein phosphatase 1E [Homo sapiens] 41 0.001
gi|226497734 RNA binding motif protein 19 [Homo sapiens] 39 0.003
gi|226497654 RNA binding motif protein 19 [Homo sapiens] 39 0.003
gi|226497574 RNA binding motif protein 19 [Homo sapiens] 39 0.003
gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens] 39 0.003
gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens] 39 0.003
gi|211971074 A kinase (PRKA) anchor protein 2 isoform 2 [Homo sa... 39 0.003
gi|51873058 A kinase (PRKA) anchor protein 2 isoform 1 [Homo sap... 39 0.003
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 38 0.007
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 38 0.010
gi|26051204 calcium/calmodulin-dependent protein kinase II beta ... 37 0.012
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 37 0.016
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 37 0.016
gi|39777614 SS18-like protein 1 [Homo sapiens] 37 0.016
gi|23503317 coiled-coil domain containing 96 [Homo sapiens] 37 0.016
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 37 0.021
gi|109637763 calpastatin isoform h [Homo sapiens] 37 0.021
gi|109637757 calpastatin isoform e [Homo sapiens] 37 0.021
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 36 0.036
gi|5730045 solute carrier family 16, member 2 [Homo sapiens] 35 0.047
gi|33457316 pleckstrin homology domain containing, family O memb... 35 0.081
gi|17136078 VGF nerve growth factor inducible precursor [Homo sa... 35 0.081
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 35 0.081
gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens] 34 0.11
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 34 0.14
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 34 0.14
>gi|239749902 PREDICTED: similar to hCG2040253 [Homo sapiens]
Length = 251
Score = 516 bits (1328), Expect = e-147
Identities = 251/251 (100%), Positives = 251/251 (100%)
Query: 1 MVISIRKDNIYFQIIKHGCHQPRCTTPRCESGLDTGYPPADPHHRQPELQGSSEDVTTKV 60
MVISIRKDNIYFQIIKHGCHQPRCTTPRCESGLDTGYPPADPHHRQPELQGSSEDVTTKV
Sbjct: 1 MVISIRKDNIYFQIIKHGCHQPRCTTPRCESGLDTGYPPADPHHRQPELQGSSEDVTTKV 60
Query: 61 AAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEE 120
AAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEE
Sbjct: 61 AAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEE 120
Query: 121 MQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDIHSLGAESGPIPGS 180
MQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDIHSLGAESGPIPGS
Sbjct: 121 MQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDIHSLGAESGPIPGS 180
Query: 181 AEQNEELGGGSKNRAVLVRSLPGPGALTAFLCPERKGLLPPASHIPFSPLPPVDSPISDL 240
AEQNEELGGGSKNRAVLVRSLPGPGALTAFLCPERKGLLPPASHIPFSPLPPVDSPISDL
Sbjct: 181 AEQNEELGGGSKNRAVLVRSLPGPGALTAFLCPERKGLLPPASHIPFSPLPPVDSPISDL 240
Query: 241 VFLLRPAEDRP 251
VFLLRPAEDRP
Sbjct: 241 VFLLRPAEDRP 251
>gi|239744202 PREDICTED: similar to hCG2040253 [Homo sapiens]
Length = 251
Score = 514 bits (1323), Expect = e-146
Identities = 250/251 (99%), Positives = 250/251 (99%)
Query: 1 MVISIRKDNIYFQIIKHGCHQPRCTTPRCESGLDTGYPPADPHHRQPELQGSSEDVTTKV 60
MVISIRKDNIYFQIIKHGCHQPRCTTPRCESGLDTGYPPADPHHRQPELQGSSEDVTTKV
Sbjct: 1 MVISIRKDNIYFQIIKHGCHQPRCTTPRCESGLDTGYPPADPHHRQPELQGSSEDVTTKV 60
Query: 61 AAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEE 120
AAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFS LLFHKNWKEDGGSSSASQPEE
Sbjct: 61 AAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSRLLFHKNWKEDGGSSSASQPEE 120
Query: 121 MQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDIHSLGAESGPIPGS 180
MQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDIHSLGAESGPIPGS
Sbjct: 121 MQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDIHSLGAESGPIPGS 180
Query: 181 AEQNEELGGGSKNRAVLVRSLPGPGALTAFLCPERKGLLPPASHIPFSPLPPVDSPISDL 240
AEQNEELGGGSKNRAVLVRSLPGPGALTAFLCPERKGLLPPASHIPFSPLPPVDSPISDL
Sbjct: 181 AEQNEELGGGSKNRAVLVRSLPGPGALTAFLCPERKGLLPPASHIPFSPLPPVDSPISDL 240
Query: 241 VFLLRPAEDRP 251
VFLLRPAEDRP
Sbjct: 241 VFLLRPAEDRP 251
>gi|13491174 MARCKS-like 1 [Homo sapiens]
Length = 195
Score = 140 bits (352), Expect = 1e-33
Identities = 94/184 (51%), Positives = 102/184 (55%), Gaps = 53/184 (28%)
Query: 55 DVTTKVAAGASPAKANGQDDGH-------------------------------------- 76
DVT + AAGASPAKANGQ++GH
Sbjct: 12 DVTAEEAAGASPAKANGQENGHVKSNGDLSPKGEGESPPVNGTDEAAGATGDAIEPAPPS 71
Query: 77 -GAEAKGAVSPN-------KFSLKKSFKFSSLLFHKNWKEDGGSSSASQP-EEMQEQG-- 125
GAEAKG V P KFS KK FK S L F +N KE GG SSAS P EE QEQG
Sbjct: 72 QGAEAKGEVPPKETPKKKKKFSFKKPFKLSGLSFKRNRKEGGGDSSASSPTEEEQEQGEI 131
Query: 126 -ACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDIH---SLGAESGPIPGSA 181
ACS++GTAQE KAAATPESQEPQAKGAE +AASEE G + G ESGP P SA
Sbjct: 132 GACSDEGTAQEGKAAATPESQEPQAKGAEASAASEEEAGPQATEPSTPSGPESGPTPASA 191
Query: 182 EQNE 185
EQNE
Sbjct: 192 EQNE 195
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 52.8 bits (125), Expect = 3e-07
Identities = 50/190 (26%), Positives = 72/190 (37%), Gaps = 23/190 (12%)
Query: 40 ADPHHRQPELQGSSEDVTTKVAAGASPAKANGQDDGHGAEAKGAVSPN---------KFS 90
A P ++ +G + + + AA A A AE SP+ +FS
Sbjct: 100 ASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFS 159
Query: 91 LKKSFKFSSLLFHKNWKE--DGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEP- 147
KKSFK S F KN KE +GG + A E +++ A A E AA+ ++ P
Sbjct: 160 FKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPG 219
Query: 148 --QAKGAEGNAASEEAPGYRDIHSLGAESGPI---------PGSAEQNEELGGGSKNRAV 196
A G EG A + ++ E P P E+ + G+ A
Sbjct: 220 EEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAAC 279
Query: 197 LVRSLPGPGA 206
S GPGA
Sbjct: 280 EAPSAAGPGA 289
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 59 KVAAGASPAKANGQDDGH-----GAEAKGAVSPNKFSLKKSFKFSSLLFHKNWKEDGGSS 113
+ A +SP+KANGQ++GH A A S K L+ + + + G++
Sbjct: 21 EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAA 80
Query: 114 SASQPEEMQEQGACSNKGTAQ--ERKAAATPESQEP-QAKGAEGNAASEEAPGYRDIHSL 170
S S E+ + A + + A E++A A E+ EP AEG AAS + S
Sbjct: 81 SPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAAS----STSSP 136
Query: 171 GAESGPIPGSAEQ 183
AE G P + +
Sbjct: 137 KAEDGATPSPSNE 149
>gi|30089948 protein phosphatase 1E [Homo sapiens]
Length = 755
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 15/123 (12%)
Query: 124 QGACSNKGTAQERKAAATPESQ-----EPQAKGAEGNAASEEAPGYRDIHSLGAESGPIP 178
+G C E + PE + EP+ AE AS E P G E+ +
Sbjct: 23 RGPCGGGEPEPEPEPEPEPEPESEPEPEPELVEAEAAEASVEEP--------GEEAATVA 74
Query: 179 GSAEQNEELGGGSKNRAVLVRSLPGPGALTAFLCPERKGLLPPASHIPFSPLPPVDSPIS 238
+ E ++E + A + GA TA P + PP +P PLPP+ P+S
Sbjct: 75 ATEEGDQEQDPEPEEEAAVEGEEEEEGAATAAAAPGHSAVPPPPPQLP--PLPPLPRPLS 132
Query: 239 DLV 241
+ +
Sbjct: 133 ERI 135
>gi|226497734 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 39.3 bits (90), Expect = 0.003
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 75 GHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEEMQEQGA-CSNKGTA 133
G E + ++ P K +++K + S + + K+ GSSS+S+ EE +++ C A
Sbjct: 186 GEDLEEEASLEP-KAAVQK--ELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEA 242
Query: 134 QERKAAATPESQEPQAKGA---EGNAASEEAP 162
+E ++ATP QE +KGA +G A ++ P
Sbjct: 243 EEEDSSATPVLQERDSKGAGQEQGMPAGKKRP 274
>gi|226497654 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 39.3 bits (90), Expect = 0.003
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 75 GHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEEMQEQGA-CSNKGTA 133
G E + ++ P K +++K + S + + K+ GSSS+S+ EE +++ C A
Sbjct: 186 GEDLEEEASLEP-KAAVQK--ELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEA 242
Query: 134 QERKAAATPESQEPQAKGA---EGNAASEEAP 162
+E ++ATP QE +KGA +G A ++ P
Sbjct: 243 EEEDSSATPVLQERDSKGAGQEQGMPAGKKRP 274
>gi|226497574 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 39.3 bits (90), Expect = 0.003
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 75 GHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEEMQEQGA-CSNKGTA 133
G E + ++ P K +++K + S + + K+ GSSS+S+ EE +++ C A
Sbjct: 186 GEDLEEEASLEP-KAAVQK--ELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEA 242
Query: 134 QERKAAATPESQEPQAKGA---EGNAASEEAP 162
+E ++ATP QE +KGA +G A ++ P
Sbjct: 243 EEEDSSATPVLQERDSKGAGQEQGMPAGKKRP 274
>gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]
Length = 1090
Score = 39.3 bits (90), Expect = 0.003
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Query: 39 PADPHHRQPELQGSSEDVTTK-VAAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFK- 96
PA H R + + ED+ T+ + A+ + ++ A AKG +P FS+K ++
Sbjct: 530 PASSHERASMIDKAKEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRP 589
Query: 97 FSSLLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNA 156
S+ K S PE+ GA + KG +K+ E+ P A G++GN
Sbjct: 590 LGSVNSDKPLTNPRPPSVGGPPED---SGASAAKG----QKSPGALET--PSAAGSQGNT 640
Query: 157 ASEEAPGYRDIHSLGAESGPI 177
AS+ G +S ++ GP+
Sbjct: 641 ASQ---GKEGPYSEPSKRGPL 658
>gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]
Length = 1103
Score = 39.3 bits (90), Expect = 0.003
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Query: 39 PADPHHRQPELQGSSEDVTTK-VAAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFK- 96
PA H R + + ED+ T+ + A+ + ++ A AKG +P FS+K ++
Sbjct: 530 PASSHERASMIDKAKEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRP 589
Query: 97 FSSLLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNA 156
S+ K S PE+ GA + KG +K+ E+ P A G++GN
Sbjct: 590 LGSVNSDKPLTNPRPPSVGGPPED---SGASAAKG----QKSPGALET--PSAAGSQGNT 640
Query: 157 ASEEAPGYRDIHSLGAESGPI 177
AS+ G +S ++ GP+
Sbjct: 641 ASQ---GKEGPYSEPSKRGPL 658
>gi|211971074 A kinase (PRKA) anchor protein 2 isoform 2 [Homo
sapiens]
Length = 859
Score = 39.3 bits (90), Expect = 0.003
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Query: 39 PADPHHRQPELQGSSEDVTTK-VAAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFK- 96
PA H R + + ED+ T+ + A+ + ++ A AKG +P FS+K ++
Sbjct: 299 PASSHERASMIDKAKEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRP 358
Query: 97 FSSLLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNA 156
S+ K S PE+ GA + KG +K+ E+ P A G++GN
Sbjct: 359 LGSVNSDKPLTNPRPPSVGGPPED---SGASAAKG----QKSPGALET--PSAAGSQGNT 409
Query: 157 ASEEAPGYRDIHSLGAESGPI 177
AS+ G +S ++ GP+
Sbjct: 410 ASQ---GKEGPYSEPSKRGPL 427
>gi|51873058 A kinase (PRKA) anchor protein 2 isoform 1 [Homo
sapiens]
Length = 948
Score = 39.3 bits (90), Expect = 0.003
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Query: 39 PADPHHRQPELQGSSEDVTTK-VAAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFK- 96
PA H R + + ED+ T+ + A+ + ++ A AKG +P FS+K ++
Sbjct: 388 PASSHERASMIDKAKEDIVTEQIDFSAARKQFQLMENSRQAVAKGQSTPRLFSIKPFYRP 447
Query: 97 FSSLLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNA 156
S+ K S PE+ GA + KG +K+ E+ P A G++GN
Sbjct: 448 LGSVNSDKPLTNPRPPSVGGPPED---SGASAAKG----QKSPGALET--PSAAGSQGNT 498
Query: 157 ASEEAPGYRDIHSLGAESGPI 177
AS+ G +S ++ GP+
Sbjct: 499 ASQ---GKEGPYSEPSKRGPL 516
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 38.1 bits (87), Expect = 0.007
Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 16/155 (10%)
Query: 41 DPHHRQPELQGSSEDVTTKVAAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSL 100
+ H E +G E+ K + G+++G G E +G + KK +
Sbjct: 733 EEHGEGEEEEGDREEEEEK--------EGEGKEEGEGEEVEGEREKEEGERKKEERAGK- 783
Query: 101 LFHKNWKEDGGSSSASQPE-----EMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGN 155
+ +E+G + E E +E+G G +E K E +E + + EG
Sbjct: 784 --EEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGE 841
Query: 156 AASEEAPGYRDIHSLGAESGPIPGSAEQNEELGGG 190
EE G + E G E+ E G G
Sbjct: 842 GEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEG 876
Score = 29.3 bits (64), Expect = 3.4
Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 7/146 (4%)
Query: 48 ELQGSSEDVTTKVAAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWK 107
E +G E+ + + G+++G E +G + ++ + + +
Sbjct: 844 EEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGE------GEGEE 897
Query: 108 EDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPG-YRD 166
E+G + E E+ KG + + E +E + +G +G EE G +
Sbjct: 898 EEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEG 957
Query: 167 IHSLGAESGPIPGSAEQNEELGGGSK 192
G G G E E G G +
Sbjct: 958 EEEEGEGEGEEEGEGEGEEGEGEGEE 983
Score = 28.9 bits (63), Expect = 4.4
Identities = 20/84 (23%), Positives = 30/84 (35%)
Query: 107 KEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRD 166
+E+ G + E +E+G + +E + E E + + EG EE
Sbjct: 836 EEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEG 895
Query: 167 IHSLGAESGPIPGSAEQNEELGGG 190
G G G E EE G G
Sbjct: 896 EEEEGEGEGEEEGEGEGEEEEGEG 919
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 37.7 bits (86), Expect = 0.010
Identities = 46/217 (21%), Positives = 69/217 (31%), Gaps = 22/217 (10%)
Query: 34 DTGYPPADPHHRQPELQGSSEDVTTKVAAGASPAKANGQDDGHGAEAKGAVSPNKFSLKK 93
D G PPA +QP A PAK + + + S + S
Sbjct: 2505 DVGEPPASTGAQQPS-----------ALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSS 2553
Query: 94 SFKFSSLLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAE 153
S SS + GSS QPE ++ + + PE + K
Sbjct: 2554 SSSGSSS------SDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRS 2607
Query: 154 GNAASEEAPGYRDIHSLGAESGPIPGSAEQNEELGGGSKNRAVLVRSLPGPGALTAFLCP 213
+++S + S + S S+ + S + + PGP AL P
Sbjct: 2608 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAK--PGPQALPKPASP 2665
Query: 214 ERKGLLPPASHIPFSPLPPVDSPISDLVFLLRPAEDR 250
++ PP SP P+DS P E R
Sbjct: 2666 KKP---PPGERRSRSPRKPIDSLRDSRSLSYSPVERR 2699
>gi|26051204 calcium/calmodulin-dependent protein kinase II beta
isoform 1 [Homo sapiens]
Length = 666
Score = 37.4 bits (85), Expect = 0.012
Identities = 38/178 (21%), Positives = 68/178 (38%), Gaps = 20/178 (11%)
Query: 88 KFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQ-- 145
KF+ ++ K + L + + P M + + G ++ K+ ++
Sbjct: 293 KFNARRKLKGAILTTMLATRNFSVGRQTTAPATMSTAASGTTMGLVEQAKSLLNKKADGV 352
Query: 146 EPQAKGAEGNAASEEAPGYRDIHSLGAES----GPIPGSAEQNEELGGGSKNRAVLVRSL 201
+PQ + +AA+ G +L ++ P+ G E ++ ++ +
Sbjct: 353 KPQTNSTKNSAAATSPKGTLPPAALEPQTTVIHNPVDGIKESSDSANTTIEDEDAKAPRV 412
Query: 202 P--------GPGALTAFLCPERKGLLPPASHIPFSPLPPVDSPISDLVFLLRPAEDRP 251
P G GA PE +G LP S PFSPLP ISD++ +R P
Sbjct: 413 PDILSSVRRGSGA------PEAEGPLPCPSPAPFSPLPAPSPRISDILNSVRRGSGTP 464
>gi|74027251 tripartite motif-containing 33 protein isoform beta
[Homo sapiens]
Length = 1110
Score = 37.0 bits (84), Expect = 0.016
Identities = 26/98 (26%), Positives = 34/98 (34%)
Query: 108 EDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDI 167
E GG S S P G + + E +E GAEG AA + G
Sbjct: 11 ESGGGGSGSAPVTAGAAGPAAQEAEPPLTAVLVEEEEEEGGRAGAEGGAAGPDDGGVAAA 70
Query: 168 HSLGAESGPIPGSAEQNEELGGGSKNRAVLVRSLPGPG 205
S A++ P ++ GG A S P PG
Sbjct: 71 SSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPAPG 108
Score = 32.7 bits (73), Expect = 0.31
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 63 GASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEEMQ 122
G A++ G G GA P + +++ + + + +E+GG + A
Sbjct: 6 GGGEAESGGGGSGSAPVTAGAAGP---AAQEAEPPLTAVLVEEEEEEGGRAGAEGGAAGP 62
Query: 123 EQG--ACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDIHSLGAESGPIPG 179
+ G A ++ G+AQ AA++P + G G A S AP + G +GP PG
Sbjct: 63 DDGGVAAASSGSAQ---AASSPAASV--GTGVAGGAVSTPAPAPASAPAPGPSAGPPPG 116
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 37.0 bits (84), Expect = 0.016
Identities = 26/98 (26%), Positives = 34/98 (34%)
Query: 108 EDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDI 167
E GG S S P G + + E +E GAEG AA + G
Sbjct: 11 ESGGGGSGSAPVTAGAAGPAAQEAEPPLTAVLVEEEEEEGGRAGAEGGAAGPDDGGVAAA 70
Query: 168 HSLGAESGPIPGSAEQNEELGGGSKNRAVLVRSLPGPG 205
S A++ P ++ GG A S P PG
Sbjct: 71 SSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPAPG 108
Score = 32.7 bits (73), Expect = 0.31
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 63 GASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEEMQ 122
G A++ G G GA P + +++ + + + +E+GG + A
Sbjct: 6 GGGEAESGGGGSGSAPVTAGAAGP---AAQEAEPPLTAVLVEEEEEEGGRAGAEGGAAGP 62
Query: 123 EQG--ACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDIHSLGAESGPIPG 179
+ G A ++ G+AQ AA++P + G G A S AP + G +GP PG
Sbjct: 63 DDGGVAAASSGSAQ---AASSPAASV--GTGVAGGAVSTPAPAPASAPAPGPSAGPPPG 116
>gi|39777614 SS18-like protein 1 [Homo sapiens]
Length = 396
Score = 37.0 bits (84), Expect = 0.016
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 18/140 (12%)
Query: 36 GYPPADPHHRQPELQGSSEDVT----------TKVAAGASPAKANGQDDGHGAEAKGAVS 85
G P P+ +P QGSS+ + A P DGHG A S
Sbjct: 228 GQRPMAPY--RPSQQGSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSS 285
Query: 86 PNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQ 145
+ S +SF+ S+ ++ +GG+S SQ + +QGA + +Q++ +
Sbjct: 286 YTEQSYDRSFEESTQHYY-----EGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPG 340
Query: 146 EPQAKGAEGNAASEEAPGYR 165
+ Q G+ A S + PGY+
Sbjct: 341 QQQGYGSAQGAPS-QYPGYQ 359
>gi|23503317 coiled-coil domain containing 96 [Homo sapiens]
Length = 555
Score = 37.0 bits (84), Expect = 0.016
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 116 SQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEG----NAASEEAPGYRDIHSLG 171
S+PEE +E+ A S GTA + +A A +A G EG +E P + +G
Sbjct: 45 SEPEEEEEEQAASQGGTAADEQAEAPKGLTAAEAAGEEGPGEPGRPAEPQPEPEEPAEVG 104
Query: 172 AE--SGPIPGSAEQNEELGGGSK 192
AE + P PG+ + E G++
Sbjct: 105 AEEPAQPEPGAGPEELEAEAGAE 127
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 36.6 bits (83), Expect = 0.021
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 40 ADPHHRQPELQGSSEDVTTKVAAGASP---AKAN----GQDDGHGAEAKGAVSPNKFSLK 92
AD + E S E+ T K+ A P AKA + G+ + S + S +
Sbjct: 421 ADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEE 480
Query: 93 KSFKFSSLLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPES-QEPQAKG 151
+ K S K ++ G ++ S+P A + KG A+ ++++ +S +E + K
Sbjct: 481 EEEKTSKSAVKKKPQKVAGGAAPSKP-------ASAKKGKAESSNSSSSDDSSEEEEEKL 533
Query: 152 AEGNAASEEAPGYRDIHSLGAESGPIPGSAEQNEELGGGSKNRAVLVRSLPG 203
+ +AP +L A++G ++E+ EE K +A +V S G
Sbjct: 534 KGKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEE----EKKKAAVVVSKSG 581
>gi|109637763 calpastatin isoform h [Homo sapiens]
Length = 769
Score = 36.6 bits (83), Expect = 0.021
Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 17/161 (10%)
Query: 51 GSSEDVTTKVAAGASPAKANGQDDGHGAEAKGA-VSPNKFSL------KKSFKFSSLLFH 103
GSS+ T AS K + GA +K + ++P + KKS + H
Sbjct: 53 GSSQSSRTYAGGTASATKVSASS---GATSKSSSMNPTETKAVKTEPEKKSQSTKLSVVH 109
Query: 104 KNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEE--A 161
+ ++G ++P+ + +Q + + A +KA + Q+P K E ++ +
Sbjct: 110 EKKSQEGKPKEHTEPKSLPKQASDTGSNDAHNKKAVSRSAEQQPSEKSTEPKTKPQDMIS 169
Query: 162 PGYRDIHSLGAESGPIPGSAEQNEELGGGSKNRAVLVRSLP 202
G + + A SG PG ++ ++ S AV V S P
Sbjct: 170 AGGESVAGITAISGK-PGDKKKEKK----SLTPAVPVESKP 205
>gi|109637757 calpastatin isoform e [Homo sapiens]
Length = 756
Score = 36.6 bits (83), Expect = 0.021
Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 17/161 (10%)
Query: 51 GSSEDVTTKVAAGASPAKANGQDDGHGAEAKGA-VSPNKFSL------KKSFKFSSLLFH 103
GSS+ T AS K + GA +K + ++P + KKS + H
Sbjct: 53 GSSQSSRTYAGGTASATKVSASS---GATSKSSSMNPTETKAVKTEPEKKSQSTKLSVVH 109
Query: 104 KNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEE--A 161
+ ++G ++P+ + +Q + + A +KA + Q+P K E ++ +
Sbjct: 110 EKKSQEGKPKEHTEPKSLPKQASDTGSNDAHNKKAVSRSAEQQPSEKSTEPKTKPQDMIS 169
Query: 162 PGYRDIHSLGAESGPIPGSAEQNEELGGGSKNRAVLVRSLP 202
G + + A SG PG ++ ++ S AV V S P
Sbjct: 170 AGGESVAGITAISGK-PGDKKKEKK----SLTPAVPVESKP 205
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 35.8 bits (81), Expect = 0.036
Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 21/141 (14%)
Query: 48 ELQGSSEDVTTKVAAGA-SPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNW 106
E Q SEDV A G A+ Q + G EA+ K + + + +
Sbjct: 1992 EAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQP---------KSEGEEAQEVEGETQ 2042
Query: 107 KEDGGSSSASQPEEMQE--QGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGY 164
K +G + S E E + A +G QE + A PES++ A+ AEG A E
Sbjct: 2043 KTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPE----- 2097
Query: 165 RDIHSLGAESGPIPGSAEQNE 185
S G E+ G A++ E
Sbjct: 2098 ----SEGVEAPEAEGEAQKAE 2114
Score = 33.9 bits (76), Expect = 0.14
Identities = 40/161 (24%), Positives = 58/161 (36%), Gaps = 14/161 (8%)
Query: 30 ESGLDTGYPPADPHHRQPELQGSSEDVTTKVAAG-ASPAKANGQ---DDGHGAEAKGAVS 85
+ G G + + E Q SE V A G A A+ Q +D EA+G
Sbjct: 1825 DPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQ 1884
Query: 86 PNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQ 145
P ++ W+ S A PE +E + A E + PES+
Sbjct: 1885 PESEDVETP--------EAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESE 1936
Query: 146 EPQAKGAEGNAASEEAPGYRDIHSLGAESGPIPGSAEQNEE 186
+A+ AE A++EA G S ES A+ E
Sbjct: 1937 GAEAQEAE--EAAQEAEGQTQPESEVIESQEAEEEAQPESE 1975
Score = 32.0 bits (71), Expect = 0.52
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 46 QPELQGSSEDVTTKVAAGASPA----KANGQDD--GHGAEAKGAVSPNKFSLKKSFKFSS 99
QPE +G+ K A + + + G+D+ GAEA+ A + + ++ S
Sbjct: 1900 QPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESE 1959
Query: 100 LLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEG--NAA 157
++ + +E+ +QPE ++ A + QE + A PES++ +A AEG A
Sbjct: 1960 VIESQEAEEE------AQPES-EDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEA 2012
Query: 158 SEEAPGYRDIHSLGAESGPIPGSAEQNEELGG 189
EEA D G E+ P E+ +E+ G
Sbjct: 2013 EEEAQPESD----GVEAQP-KSEGEEAQEVEG 2039
Score = 31.2 bits (69), Expect = 0.89
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 13/135 (9%)
Query: 63 GASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWKEDGGSSSAS------ 116
G ++ G D+G E ++ +K + ++ + K +SA
Sbjct: 1731 GPGLSQGPGVDEGEDGEGSQRLNRDKDPKLGEAEGDAMAQEREGKTHNSETSAGSELGEA 1790
Query: 117 --QPEEMQEQGACSNKGTAQER----KAAATPESQEPQAKGAEGNAASEEAPGYRDIHSL 170
+ E + E+G +G+ E +AAA + Q+ GAEG A E A G S
Sbjct: 1791 EQEGEGISERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPE-AEGEAQPESE 1849
Query: 171 GAESGPIPGSAEQNE 185
G E+ G A++ E
Sbjct: 1850 GVEAPEAEGDAQEAE 1864
Score = 30.8 bits (68), Expect = 1.2
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 10/119 (8%)
Query: 48 ELQGSSEDVTTKVAAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWK 107
E +G + + T + A+ G+ E G S ++ +L+ ++
Sbjct: 1771 EREGKTHNSETSAGSELGEAEQEGEGISERGETGGQGSGHEDNLQGEAAAGG---DQDPG 1827
Query: 108 EDGGSSSASQPE-------EMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASE 159
+ G+ PE E + A +G AQE + A PES++ +A AEG A E
Sbjct: 1828 QSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPE 1886
Score = 30.8 bits (68), Expect = 1.2
Identities = 37/150 (24%), Positives = 54/150 (36%), Gaps = 27/150 (18%)
Query: 48 ELQGSSEDVTTKVAAGASPAKANGQD----DGHGAEAKGAVSPNKFSLKKSFKFSSLLFH 103
E SEDV + A G + ++ G + +G +A+G +P
Sbjct: 2077 EAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPET--------------- 2121
Query: 104 KNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASE---- 159
+ S PE E S AQ+ + A PES+ +A+ AE A E
Sbjct: 2122 -EGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGV 2180
Query: 160 ---EAPGYRDIHSLGAESGPIPGSAEQNEE 186
EA G S G E+ G A+ E
Sbjct: 2181 EAPEAEGEAQPESEGIEAPEAEGEAQPELE 2210
>gi|5730045 solute carrier family 16, member 2 [Homo sapiens]
Length = 613
Score = 35.4 bits (80), Expect = 0.047
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 108 EDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPG 163
E GG S S +CS++ Q + ++ P S P A A + ASEEA G
Sbjct: 32 EPGGGGSGSGSSSPPSSSSCSSRNKYQPQSGSSGPSSHSPPAAMALQSQASEEAKG 87
>gi|33457316 pleckstrin homology domain containing, family O member
2 [Homo sapiens]
Length = 490
Score = 34.7 bits (78), Expect = 0.081
Identities = 48/210 (22%), Positives = 64/210 (30%), Gaps = 24/210 (11%)
Query: 38 PPADPHHRQPELQGSSEDVTTKVA-------AGASPAKANGQDDGH--GAEAKGAVSPNK 88
PP P PE + V T V + +S Q+D E G+ P
Sbjct: 205 PPTKPF-LAPETTSPGDRVETPVGERAPTPVSASSEVSPESQEDSETPAEEDSGSEQPPN 263
Query: 89 FSLKKSFKFSSLLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPE----- 143
L K S W+ + + Q CS A R+ P
Sbjct: 264 SVLPDKLKVS-------WENPSPQEAPAAESAEPSQAPCSETSEAAPREGGKPPTPPPKI 316
Query: 144 -SQEPQAKGAEGNAASEEAPGYRDIHSLGAESGPIPGSAEQNEELGGGSKNRAVLVRSLP 202
S++ +A E A+ APG + G + P P Q E G A +LP
Sbjct: 317 LSEKLKASMGEMQASGPPAPGTVQVSVNGMDDSPEPAKPSQAEGTPGTPPKDATTSTALP 376
Query: 203 GPGALTAFLCPERKGLLPPASHIPFSPLPP 232
P L P L P PL P
Sbjct: 377 -PWDLPPQFHPRCSSLGDLLGEGPRHPLQP 405
>gi|17136078 VGF nerve growth factor inducible precursor [Homo
sapiens]
Length = 615
Score = 34.7 bits (78), Expect = 0.081
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 110 GGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDIHS 169
GG + +E + + + R+ A +E GAE + EE PG+R +
Sbjct: 373 GGEERVGEEDEEAAEAEAEAEEAERARQNALLFAEEEDGEAGAEDKRSQEETPGHRRKEA 432
Query: 170 LGAESGPIPGSAEQNEEL 187
G E G G E +EE+
Sbjct: 433 EGTEEG---GEEEDDEEM 447
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 34.7 bits (78), Expect = 0.081
Identities = 52/209 (24%), Positives = 79/209 (37%), Gaps = 39/209 (18%)
Query: 38 PPADPHH-RQPELQGSSEDVTTKVAAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFK 96
PP P +P L + + T +AA P + G + K A P+ + +
Sbjct: 1107 PPCSPRSLEEPGLLSGAREATQDLAATPYPTE-------RGPQGKAA-DPSPLEGLQELQ 1158
Query: 97 FSSLLFHKNWKEDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNA 156
++LL E GG + Q A S +G A+E ++ E ++ + GA
Sbjct: 1159 CAALL------EAGGPEATGQ--------AHSTQGGAREERSRE--EGEQGPSSGASSQV 1202
Query: 157 ASEEAPGYRDIHSLGAESGPIPG----------SAEQNEELGGGSKNRAVLVRSLPGPGA 206
+ A + G + P S E +EE GG+ + + R+LPG A
Sbjct: 1203 LEQRAGSPGALEDEGEQPAPEEDELEEDELGQQSMEDSEEDCGGAPDNSHPPRALPGLDA 1262
Query: 207 LTAFLCPERKGLLPPASHIPFSPLPPVDS 235
L A G LP S P P PP S
Sbjct: 1263 LVA--ATINLGDLP--SDSPPDPQPPAAS 1287
>gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]
Length = 532
Score = 34.3 bits (77), Expect = 0.11
Identities = 35/153 (22%), Positives = 62/153 (40%), Gaps = 19/153 (12%)
Query: 111 GSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDIHS- 169
G +P ++ +CS + +E A + +S + +++S+E D+ +
Sbjct: 73 GKRPRGRPRKLTAMSSCSRRSKLKEPDAPSKSKSSSSSSSSTSSSSSSDEEDD-SDLDAK 131
Query: 170 ---LGAESGPIPGSAEQ----NEELGG------GSKNRAVLVRSLPGPGALTAFLCPERK 216
G E+ P+P Q EL G K ++ P +L L RK
Sbjct: 132 RGPRGRETHPVPQKKAQILVAKPELKDPIRKKRGRKPLPPEQKATRRPVSLAKVLKTARK 191
Query: 217 GLLPPASHIPFSPLPPVDSPISDLVFLLRPAED 249
L PAS +P PP+ +P++ L L A++
Sbjct: 192 DLGAPASKLP----PPLSAPVAGLAALKAHAKE 220
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 33.9 bits (76), Expect = 0.14
Identities = 55/218 (25%), Positives = 78/218 (35%), Gaps = 36/218 (16%)
Query: 25 TTPRCESGLDTGYPPADPHHRQPELQGSSEDVTTKVAAGASPAKANGQDDGHGAEAKGAV 84
TTP+ G+ PA R P S D T G+ P G + + A G +
Sbjct: 82 TTPQPGPPHQPGFNPASSP-RLPLPADSEPDAYTSAPRGSGPTYCAGAGN---SRAGGGL 137
Query: 85 SPNKFSLKKSFKFSSLLFHKNWKEDGGSSSASQPE-EMQEQGACSNKGTAQERKAAATP- 142
+ K++S SS +P Q +GA G E +AA
Sbjct: 138 T----------KYNSA---------HSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGL 178
Query: 143 ---ESQEPQAKGAEGNAASEEAPGYRDIHSLGA-ESGPIPGSAEQNEELGGGSKNRAVLV 198
++ +G E P H GA ++GP+PG+ + G GS R
Sbjct: 179 GGRSARARTRRGPHRTRRPEPGP-----HHTGARQAGPLPGTRGRTRAAGTGSAARGP-A 232
Query: 199 RSLPGPGALTAFLCPERKGLLPPASHIPFSPLPPVDSP 236
R L G G++ A GL PP FSP + P
Sbjct: 233 RHLRG-GSVAAAAAARCLGLSPPGRSRLFSPRSSLARP 269
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 33.9 bits (76), Expect = 0.14
Identities = 42/185 (22%), Positives = 58/185 (31%), Gaps = 32/185 (17%)
Query: 48 ELQGSSEDVTTKVAAGASPAKANGQDDGHGAEAKGAVSPNKFSLKKSFKFSSLLFHKNWK 107
ELQ ++D T+VA GA P P S ++ + + L + +
Sbjct: 180 ELQSDTDDSDTRVAEGARP------------------RPGPTSSRRPWGRAGGLRPRGKR 221
Query: 108 EDGGSSSASQPEEMQEQGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGYRDI 167
G S A T+ R A + +Q A+ A G D
Sbjct: 222 PARGKKRPSSQRRCSSPSAARASATSAPRPTAPSSVAQPSSARSQRRRAPCPHRAGGAD- 280
Query: 168 HSLGAESGPIPGSAEQNEELGGGSKNRAVLVRSLPGPGALTAFLCPERKGLL--PPASHI 225
+G+ PG E G R L GP FL P PP H+
Sbjct: 281 -GVGSHGARAPG-----EGSAGSGTERVEL-----GPHVRPFFLPPTSSSFFGGPPRLHV 329
Query: 226 PFSPL 230
P PL
Sbjct: 330 PLPPL 334
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.130 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,474,070
Number of Sequences: 37866
Number of extensions: 685622
Number of successful extensions: 3016
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 2791
Number of HSP's gapped (non-prelim): 435
length of query: 251
length of database: 18,247,518
effective HSP length: 100
effective length of query: 151
effective length of database: 14,460,918
effective search space: 2183598618
effective search space used: 2183598618
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.