BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|117647226 RNA (guanine-9-) methyltransferase domain containing 1 [Homo sapiens] (403 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|117647226 RNA (guanine-9-) methyltransferase domain containin... 813 0.0 gi|117606330 RNA (guanine-9-) methyltransferase domain containin... 96 4e-20 gi|197927265 RNA (guanine-9-) methyltransferase domain containin... 72 7e-13 gi|197927261 RNA (guanine-9-) methyltransferase domain containin... 72 7e-13 gi|22748659 RNA (guanine-9-) methyltransferase domain containing... 72 7e-13 gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 37 0.024 gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 37 0.041 gi|11067749 bromodomain containing protein 3 [Homo sapiens] 35 0.16 gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 35 0.16 gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 34 0.21 gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 34 0.21 gi|38788260 bromodomain PHD finger transcription factor isoform ... 34 0.21 gi|38788274 bromodomain PHD finger transcription factor isoform ... 34 0.21 gi|94680976 coiled-coil domain containing 112 isoform 1 [Homo sa... 34 0.21 gi|145580595 coiled-coil domain containing 112 isoform 2 [Homo s... 34 0.21 gi|153791492 eukaryotic translation initiation factor 3, subunit... 34 0.27 gi|45505178 cancer antigen 1 [Homo sapiens] 33 0.46 gi|23503243 Ras association (RalGDS/AF-6) domain family (N-termi... 33 0.60 gi|95147555 microtubule-associated protein 1A [Homo sapiens] 32 0.78 gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens] 32 0.78 gi|93204861 protein phosphatase 1, regulatory (inhibitor) subuni... 32 0.78 gi|194294523 intersectin 2 isoform 3 [Homo sapiens] 32 1.0 gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 32 1.3 gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 32 1.3 gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 32 1.3 gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 32 1.3 gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 32 1.3 gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 32 1.3 gi|153791218 hypothetical protein LOC115749 [Homo sapiens] 32 1.3 gi|46852390 coiled-coil domain containing 6 [Homo sapiens] 32 1.3 >gi|117647226 RNA (guanine-9-) methyltransferase domain containing 1 [Homo sapiens] Length = 403 Score = 813 bits (2101), Expect = 0.0 Identities = 403/403 (100%), Positives = 403/403 (100%) Query: 1 MAAFLKMSVSVNFFRPFTRFLVPFTLHRKRNNLTILQRYMSSKIPAVTYPKNESTPPSEE 60 MAAFLKMSVSVNFFRPFTRFLVPFTLHRKRNNLTILQRYMSSKIPAVTYPKNESTPPSEE Sbjct: 1 MAAFLKMSVSVNFFRPFTRFLVPFTLHRKRNNLTILQRYMSSKIPAVTYPKNESTPPSEE 60 Query: 61 LELDKWKTTMKSSVQEECVSTISSSKDEDPLAATREFIEMWRLLGREVPEHITEEELKTL 120 LELDKWKTTMKSSVQEECVSTISSSKDEDPLAATREFIEMWRLLGREVPEHITEEELKTL Sbjct: 61 LELDKWKTTMKSSVQEECVSTISSSKDEDPLAATREFIEMWRLLGREVPEHITEEELKTL 120 Query: 121 MECVSNTAKKKYLKYLYTKEKVKKARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFLFL 180 MECVSNTAKKKYLKYLYTKEKVKKARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFLFL Sbjct: 121 MECVSNTAKKKYLKYLYTKEKVKKARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFLFL 180 Query: 181 RLWDRNMDIAMGWKGAQAMQFGQPLVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDP 240 RLWDRNMDIAMGWKGAQAMQFGQPLVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDP Sbjct: 181 RLWDRNMDIAMGWKGAQAMQFGQPLVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDP 240 Query: 241 FHIYFCNLKIDGALHRELVKRYQEKWDKLLLTSTEKSHVDLFPKDSIIYLTADSPNVMTT 300 FHIYFCNLKIDGALHRELVKRYQEKWDKLLLTSTEKSHVDLFPKDSIIYLTADSPNVMTT Sbjct: 241 FHIYFCNLKIDGALHRELVKRYQEKWDKLLLTSTEKSHVDLFPKDSIIYLTADSPNVMTT 300 Query: 301 FRHDKVYVIGSFVDKSMQPGTSLAKAKRLNLATECLPLDKYLQWEIGNKNLTLDQMIRIL 360 FRHDKVYVIGSFVDKSMQPGTSLAKAKRLNLATECLPLDKYLQWEIGNKNLTLDQMIRIL Sbjct: 301 FRHDKVYVIGSFVDKSMQPGTSLAKAKRLNLATECLPLDKYLQWEIGNKNLTLDQMIRIL 360 Query: 361 LCLKNNGNWQEALQFVPKRKHTGFLEISQHSQEFINRLKKAKT 403 LCLKNNGNWQEALQFVPKRKHTGFLEISQHSQEFINRLKKAKT Sbjct: 361 LCLKNNGNWQEALQFVPKRKHTGFLEISQHSQEFINRLKKAKT 403 >gi|117606330 RNA (guanine-9-) methyltransferase domain containing 3 [Homo sapiens] Length = 316 Score = 96.3 bits (238), Expect = 4e-20 Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 21/237 (8%) Query: 143 KKARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFLFLRLWDRNMDIAMGWKGAQAMQFG 202 K R+ +KE + A R E I Q + FLR ++ K +A G Sbjct: 80 KSKRKQEKERRKANRAENPGIC--------PQHSKRFLRALTKD-------KLLEAKHSG 124 Query: 203 QPLVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRELVKRY 262 L D++ +YM +KEL Q+ G N++ PF I D L+ E V R Sbjct: 125 PRLCIDLSMTHYMSKKELSRLAGQIRRLYGSNKKADRPFWICLTGFTTDSPLYEECV-RM 183 Query: 263 QEKWDKLLLTSTEKSHVDLFPKDSIIYLTADSPNVMTTFRHDKVYVIGSFVDKSMQPGTS 322 + + LL TE+ LFP ++++YLT DS + + +KVY++G VD+S+Q + Sbjct: 184 NDGFSSYLLDITEEDCFSLFPLETLVYLTPDSEHALEDVDLNKVYILGGLVDESIQKKVT 243 Query: 323 LAKAKRLNLATECLPLDKYLQWEIGNKN-----LTLDQMIRILLCLKNNGNWQEALQ 374 KA+ ++ T LP+ +Y+ KN L ++Q+ IL NW EAL+ Sbjct: 244 FQKAREYSVKTARLPIQEYMVRNQNGKNYHSEILAINQVFDILSTYLETHNWPEALK 300 >gi|197927265 RNA (guanine-9-) methyltransferase domain containing 2 [Homo sapiens] Length = 339 Score = 72.4 bits (176), Expect = 7e-13 Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 27/248 (10%) Query: 146 RQIKKEMKAAAREEAKNIKLLETTEEDKQKNFLFLRLWDRNMDIAMGWKGAQAMQFGQP- 204 RQ+KK +K EE + ++ + E+ K+K +R + G + + Sbjct: 43 RQMKKLIKQKQWEEQRELRKQKRKEKRKRKKL------ERQCQMEPNSDGHDRKRVRRDV 96 Query: 205 ------LVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHREL 258 L+ D ++++ M K+++ Q+ NRR + P Y + H Sbjct: 97 VHSTLRLIIDCSFDHLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTS-------HGGQ 149 Query: 259 VKRYQEKWDKLLLTSTE-----KSHVDLFPKDSIIYLTADSPNVMTTFRHDKVYVIGSFV 313 +K+ ++ DK + + + + +L K+ +IYLT+DSPN++ K YVIG V Sbjct: 150 LKKNMDENDKGWVNWKDIHIKPEHYSELIKKEDLIYLTSDSPNILKELDESKAYVIGGLV 209 Query: 314 DKSMQPGTSLAKAKRLNLATECLPLDKYLQWEIGNKNLTLDQMIRILLCLKNNGNWQEA- 372 D + G + +A + LPL +++ K L ++ + I+L +WQEA Sbjct: 210 DHNHHKGLTYKQASDYGINHAQLPLGNFVKMN-SRKVLAVNHVFEIILEYLETRDWQEAF 268 Query: 373 LQFVPKRK 380 +P+RK Sbjct: 269 FTILPQRK 276 >gi|197927261 RNA (guanine-9-) methyltransferase domain containing 2 [Homo sapiens] Length = 339 Score = 72.4 bits (176), Expect = 7e-13 Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 27/248 (10%) Query: 146 RQIKKEMKAAAREEAKNIKLLETTEEDKQKNFLFLRLWDRNMDIAMGWKGAQAMQFGQP- 204 RQ+KK +K EE + ++ + E+ K+K +R + G + + Sbjct: 43 RQMKKLIKQKQWEEQRELRKQKRKEKRKRKKL------ERQCQMEPNSDGHDRKRVRRDV 96 Query: 205 ------LVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHREL 258 L+ D ++++ M K+++ Q+ NRR + P Y + H Sbjct: 97 VHSTLRLIIDCSFDHLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTS-------HGGQ 149 Query: 259 VKRYQEKWDKLLLTSTE-----KSHVDLFPKDSIIYLTADSPNVMTTFRHDKVYVIGSFV 313 +K+ ++ DK + + + + +L K+ +IYLT+DSPN++ K YVIG V Sbjct: 150 LKKNMDENDKGWVNWKDIHIKPEHYSELIKKEDLIYLTSDSPNILKELDESKAYVIGGLV 209 Query: 314 DKSMQPGTSLAKAKRLNLATECLPLDKYLQWEIGNKNLTLDQMIRILLCLKNNGNWQEA- 372 D + G + +A + LPL +++ K L ++ + I+L +WQEA Sbjct: 210 DHNHHKGLTYKQASDYGINHAQLPLGNFVKMN-SRKVLAVNHVFEIILEYLETRDWQEAF 268 Query: 373 LQFVPKRK 380 +P+RK Sbjct: 269 FTILPQRK 276 >gi|22748659 RNA (guanine-9-) methyltransferase domain containing 2 [Homo sapiens] Length = 339 Score = 72.4 bits (176), Expect = 7e-13 Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 27/248 (10%) Query: 146 RQIKKEMKAAAREEAKNIKLLETTEEDKQKNFLFLRLWDRNMDIAMGWKGAQAMQFGQP- 204 RQ+KK +K EE + ++ + E+ K+K +R + G + + Sbjct: 43 RQMKKLIKQKQWEEQRELRKQKRKEKRKRKKL------ERQCQMEPNSDGHDRKRVRRDV 96 Query: 205 ------LVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHREL 258 L+ D ++++ M K+++ Q+ NRR + P Y + H Sbjct: 97 VHSTLRLIIDCSFDHLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTS-------HGGQ 149 Query: 259 VKRYQEKWDKLLLTSTE-----KSHVDLFPKDSIIYLTADSPNVMTTFRHDKVYVIGSFV 313 +K+ ++ DK + + + + +L K+ +IYLT+DSPN++ K YVIG V Sbjct: 150 LKKNMDENDKGWVNWKDIHIKPEHYSELIKKEDLIYLTSDSPNILKELDESKAYVIGGLV 209 Query: 314 DKSMQPGTSLAKAKRLNLATECLPLDKYLQWEIGNKNLTLDQMIRILLCLKNNGNWQEA- 372 D + G + +A + LPL +++ K L ++ + I+L +WQEA Sbjct: 210 DHNHHKGLTYKQASDYGINHAQLPLGNFVKMN-SRKVLAVNHVFEIILEYLETRDWQEAF 268 Query: 373 LQFVPKRK 380 +P+RK Sbjct: 269 FTILPQRK 276 >gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo sapiens] Length = 2168 Score = 37.4 bits (85), Expect = 0.024 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%) Query: 98 IEMWRLLGREVPEHITEEELK--TLMECVSNTAKKKYLKYLYTKEKVKKARQIKKEMKAA 155 I++ R L ++ + +E K +M +K+ +K + +EK+K+ +QI+ E + Sbjct: 901 IKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKRIQQIRMEKELR 960 Query: 156 A----------REEAKNIKLLETTEEDKQK 175 A +EEA N KLLE + K+K Sbjct: 961 AQQILEAKKKKKEEAANAKLLEAEKRIKEK 990 >gi|195976782 Paf1/RNA polymerase II complex component [Homo sapiens] Length = 710 Score = 36.6 bits (83), Expect = 0.041 Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 9/107 (8%) Query: 71 KSSVQEECVSTISSSKDEDPLAATREFIEMWR--LLGREVPEHITEEELKTLMECVSNTA 128 + V + ++ SSS D D + EF + + L+G EE+ L + Sbjct: 152 EGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLMG-------DEEDRARLEQMTEKER 204 Query: 129 KKKYLKYLYTKEKVKKARQIKKEMKAAAREEAKNIKLLETTEEDKQK 175 +++ + +E +K+ +IKK++K A ++E K K + E++K+K Sbjct: 205 EQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKK 251 >gi|11067749 bromodomain containing protein 3 [Homo sapiens] Length = 726 Score = 34.7 bits (78), Expect = 0.16 Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 13/107 (12%) Query: 71 KSSVQEECVSTISSSKDEDPLAATREFIEMWRLLGREVPEHI--TEEELKTLMECVSNTA 128 +SS E S+ S S D + ATR E+ E + E+L L + N Sbjct: 438 ESSRSSEESSSDSGSSDSEEERATRL---------AELQEQLKAVHEQLAALSQAPVNKP 488 Query: 129 KKKYLKYLYTKEKVKKARQIKKEMKAAAREEAKNIKLLETTEEDKQK 175 KKK K KEK KK ++ +KE EE K K+ ++ +QK Sbjct: 489 KKK--KEKKEKEKKKKDKEKEKEKHKVKAEEEKKAKVAPPAKQAQQK 533 >gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] Length = 1163 Score = 34.7 bits (78), Expect = 0.16 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 21/155 (13%) Query: 41 SSKIPAVTYPKNESTP--PSEELELDKW-KTTMKSSVQE-ECVSTISSSKDEDPLAATRE 96 SS+ P YP++ TP PS E D + + M S ++E E +S +S D PL + Sbjct: 662 SSQTPK--YPESNRTPVKPSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDRYPLIVKID 719 Query: 97 FIEMWRLLGR-------------EVPEHITEEELKTLMECVSNTAKKKYLKYLYTKEKVK 143 + R+ G+ VPE T E K E VSN K+K+ + Sbjct: 720 LNLLTRIPGKPYKETEPPKGEKKNVPEKHTREAQKQASEKVSNKGKRKHKN--EDDNRAS 777 Query: 144 KARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFL 178 ++++ K E K +A + + + K+K+ L Sbjct: 778 ESKKPKTEDKNSAGHKPSSNRESSKQSAAKEKDLL 812 >gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] Length = 3907 Score = 34.3 bits (77), Expect = 0.21 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%) Query: 59 EELELDKWKTTMKSSVQEECVSTISSSKDEDPLAATREFIEMWRLLGREVPEHITEEELK 118 E+ + K TM+ S +E + +D+ + +E I+ + E+ I EEE K Sbjct: 285 EDYQKKKEDFTMQISFLQEKIKVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKK 344 Query: 119 TLMECVSNTAKKKYLKYLYTK--EKVKKARQIKKEM---KAAAREEAKNIKLLETTEEDK 173 TL T K L L + +K ++ + +K E+ K R+ ++ IK L T E+ Sbjct: 345 TLELKDKLTTADKLLGELQEQIVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEEL 404 Query: 174 QK 175 QK Sbjct: 405 QK 406 >gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] Length = 3899 Score = 34.3 bits (77), Expect = 0.21 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%) Query: 59 EELELDKWKTTMKSSVQEECVSTISSSKDEDPLAATREFIEMWRLLGREVPEHITEEELK 118 E+ + K TM+ S +E + +D+ + +E I+ + E+ I EEE K Sbjct: 285 EDYQKKKEDFTMQISFLQEKIKVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKK 344 Query: 119 TLMECVSNTAKKKYLKYLYTK--EKVKKARQIKKEM---KAAAREEAKNIKLLETTEEDK 173 TL T K L L + +K ++ + +K E+ K R+ ++ IK L T E+ Sbjct: 345 TLELKDKLTTADKLLGELQEQIVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEEL 404 Query: 174 QK 175 QK Sbjct: 405 QK 406 >gi|38788260 bromodomain PHD finger transcription factor isoform 2 [Homo sapiens] Length = 2903 Score = 34.3 bits (77), Expect = 0.21 Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 44/164 (26%) Query: 56 PPSEELELDKWKTTM----KSSVQEECVSTISSSKD---EDPLAATREFIEMWRLLGREV 108 PP EE+ D+W+ + K +CV+ I +K +P+ R + W L R + Sbjct: 419 PPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRLI 478 Query: 109 PEHITEEE-------------LKTLMECVSNTAKKKYLKYLY-------------TKEKV 142 E TE E L L++C+ + L + T++ Sbjct: 479 IEEDTENENEKKIWYYSTKVQLAELIDCLDKDYWEAELCKILEEMREEIHRHMDITEDLT 538 Query: 143 KKARQIKKEMKAAAREE-----------AKNIKLLETTEEDKQK 175 KAR K AAA EE N+K E TE+DK + Sbjct: 539 NKARGSNKSFLAAANEEILESIRAKKGDIDNVKSPEETEKDKNE 582 >gi|38788274 bromodomain PHD finger transcription factor isoform 1 [Homo sapiens] Length = 2920 Score = 34.3 bits (77), Expect = 0.21 Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 44/164 (26%) Query: 56 PPSEELELDKWKTTM----KSSVQEECVSTISSSKD---EDPLAATREFIEMWRLLGREV 108 PP EE+ D+W+ + K +CV+ I +K +P+ R + W L R + Sbjct: 419 PPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRLI 478 Query: 109 PEHITEEE-------------LKTLMECVSNTAKKKYLKYLY-------------TKEKV 142 E TE E L L++C+ + L + T++ Sbjct: 479 IEEDTENENEKKIWYYSTKVQLAELIDCLDKDYWEAELCKILEEMREEIHRHMDITEDLT 538 Query: 143 KKARQIKKEMKAAAREE-----------AKNIKLLETTEEDKQK 175 KAR K AAA EE N+K E TE+DK + Sbjct: 539 NKARGSNKSFLAAANEEILESIRAKKGDIDNVKSPEETEKDKNE 582 >gi|94680976 coiled-coil domain containing 112 isoform 1 [Homo sapiens] Length = 529 Score = 34.3 bits (77), Expect = 0.21 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 32/154 (20%) Query: 107 EVPEHI---TEEELKTLMECVSNTAKKKYLKYLYTKEKVKKARQIKKEMKAAAREE---- 159 EV EH+ T++E++ +K Y K+L +E+ K++ QI K K REE Sbjct: 274 EVLEHLPGKTQDEVQQ--------HEKWYQKFLALEERKKESIQIWKTKKQQKREEIFKL 325 Query: 160 ---AKNIKLL---------ETTEEDKQKNFLFLRLWDRNMDIAMGWKGAQAMQFGQPLVF 207 A N +L + EE ++K L + W + I M K A ++ + Sbjct: 326 KEKADNTPVLFHNKQEDNQKQKEEQRKKQKLAVEAWKKQKSIEMSMKCASQLKEEEE--- 382 Query: 208 DMAYENYMKRKELQNTVSQLLESEGWNRRNVDPF 241 + + K ++ Q + LLES ++ + F Sbjct: 383 --KEKKHQKERQRQFKLKLLLESYTQQKKEQEEF 414 >gi|145580595 coiled-coil domain containing 112 isoform 2 [Homo sapiens] Length = 446 Score = 34.3 bits (77), Expect = 0.21 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 32/154 (20%) Query: 107 EVPEHI---TEEELKTLMECVSNTAKKKYLKYLYTKEKVKKARQIKKEMKAAAREE---- 159 EV EH+ T++E++ +K Y K+L +E+ K++ QI K K REE Sbjct: 191 EVLEHLPGKTQDEVQQ--------HEKWYQKFLALEERKKESIQIWKTKKQQKREEIFKL 242 Query: 160 ---AKNIKLL---------ETTEEDKQKNFLFLRLWDRNMDIAMGWKGAQAMQFGQPLVF 207 A N +L + EE ++K L + W + I M K A ++ + Sbjct: 243 KEKADNTPVLFHNKQEDNQKQKEEQRKKQKLAVEAWKKQKSIEMSMKCASQLKEEEE--- 299 Query: 208 DMAYENYMKRKELQNTVSQLLESEGWNRRNVDPF 241 + + K ++ Q + LLES ++ + F Sbjct: 300 --KEKKHQKERQRQFKLKLLLESYTQQKKEQEEF 331 >gi|153791492 eukaryotic translation initiation factor 3, subunit C-like [Homo sapiens] Length = 914 Score = 33.9 bits (76), Expect = 0.27 Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 14/141 (9%) Query: 48 TYPKNESTPPSEELELDKWKTTMKSSVQEE----CVSTISSSKDEDPLAATREFIEMWRL 103 +Y +N E+ E ++ + S E+ +T K E P +R+F++ Sbjct: 158 SYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAATFLKKKSEAPSGESRKFLKKMDD 217 Query: 104 LGREVPEHITEEELKTLMECVSNTAKK----------KYLKYLYTKEKVKKARQIKKEMK 153 + + +E+ T + +++ ++LK T ++ KKA + K+E K Sbjct: 218 EDEDSEDSEDDEDWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTDEDKKAAEKKREDK 277 Query: 154 AAAREEAKNIKLLETTEEDKQ 174 A + + K+ +L E EED + Sbjct: 278 AKKKHDRKSKRLDEEEEEDNE 298 >gi|45505178 cancer antigen 1 [Homo sapiens] Length = 641 Score = 33.1 bits (74), Expect = 0.46 Identities = 32/131 (24%), Positives = 68/131 (51%), Gaps = 12/131 (9%) Query: 59 EELELDKWKTTMKSSVQEECVSTISS--SKDEDPLAATREFIEMWRLLGREVPEHIT--E 114 EEL DK+K ++ + ++ + + + + L +R EM +L +++ + + Sbjct: 226 EELIEDKYKIILEKNDTKKTLQNLEEVLANTQKHLQESRNDKEMLQLQFKKIKANYVCLQ 285 Query: 115 EELKTLMECVSNTAKKKYLKYLYT----KEKVKKARQIKKEMKAAAREEAKNIKLLETTE 170 E T M+ N + +YL+ T +E+V++ +Q+KKE++ A A + LL+ + Sbjct: 286 ERYMTEMQ-QKNKSVSQYLEMDKTLSKKEEEVERLQQLKKELEKAT---ASALDLLKREK 341 Query: 171 EDKQKNFLFLR 181 E +++ FL L+ Sbjct: 342 EAQEQEFLSLQ 352 Score = 32.7 bits (73), Expect = 0.60 Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 19/149 (12%) Query: 29 KRNNLTILQRYMSSKIPAVTYPKNESTPPSEELELDKWKTTMKSSVQEECVSTISSSKDE 88 K N + + +RYM+ KN+S S+ LE+DK S +EE V + K E Sbjct: 278 KANYVCLQERYMTEM-----QQKNKSV--SQYLEMDK-----TLSKKEEEVERLQQLKKE 325 Query: 89 DPLAATREFIEMWRLLGREVPEHITEEELKTLMECVSNTAKKKYLKYLYTKEKVKKA-RQ 147 A LL RE + E+E +L E K+ + K +++K Q Sbjct: 326 LEKATASAL----DLLKRE--KEAQEQEFLSLQEEFQKLEKENLEERQKLKSRLEKLLTQ 379 Query: 148 IKKEMKAAAREEAKNIKLLETTEEDKQKN 176 ++ + E KNIKL + E K +N Sbjct: 380 VRNLQFMSENERTKNIKLQQQINEVKNEN 408 >gi|23503243 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 [Homo sapiens] Length = 392 Score = 32.7 bits (73), Expect = 0.60 Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 10/132 (7%) Query: 31 NNLTILQRYMSSKIPAVTYPKNESTPPSEELELDKWKTTMKSSVQEECVSTISSSKDEDP 90 + L L R + K+ ++ E S E+E+ W+ S+++EE V K D Sbjct: 164 DELKKLIRLQTEKLQSI-----EKQLESNEIEIRFWEQKYNSNLEEEIVRLEQKIKRNDV 218 Query: 91 LAATREFIEMWRLLGREVPEHI---TEEELKTLMECVSNTAKKKYLKYLYTKEKVKKARQ 147 EF E + +E + + +E + + EC + K YL + T E +A + Sbjct: 219 EIEEEEFWENELQIEQENEKQLKDQLQEIRQKITECENKL--KDYLAQIRTMESGLEAEK 276 Query: 148 IKKEMKAAAREE 159 +++E++ A E Sbjct: 277 LQREVQEAQVNE 288 >gi|95147555 microtubule-associated protein 1A [Homo sapiens] Length = 2803 Score = 32.3 bits (72), Expect = 0.78 Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 7/75 (9%) Query: 109 PEHITEEELKTLM----ECVSNTAKKKYLKYLYTK---EKVKKARQIKKEMKAAAREEAK 161 PE + E + L + + + KK+LK +K +K K+ ++IKKE K ++E + Sbjct: 377 PERVKTESSEALKAEKRKLIKDKVGKKHLKEKISKLEEKKDKEKKEIKKERKELKKDEGR 436 Query: 162 NIKLLETTEEDKQKN 176 + + +E+K+K+ Sbjct: 437 KEEKKDAKKEEKRKD 451 >gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens] Length = 543 Score = 32.3 bits (72), Expect = 0.78 Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 52 NESTPPSEELELDKWKTTMKSSV-QEECVSTISSSKDEDPLAATREFIEMWRLLGREVPE 110 NE + +++K K+ +S V +E + +SSS++E+ + + +E W LLG EV + Sbjct: 126 NELVDKKCKSDIEKPKSEERSGVIREVMIIEVSSSEEEESTISEGDNVESWMLLGCEVDD 185 Query: 111 HITEEELKTLMECVSNTAK 129 ++ L L+ C ++ + Sbjct: 186 K-DDDILLNLVGCENSVTE 203 >gi|93204861 protein phosphatase 1, regulatory (inhibitor) subunit 9A [Homo sapiens] Length = 1098 Score = 32.3 bits (72), Expect = 0.78 Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 22/146 (15%) Query: 50 PKNESTPPSEELELDKWKTTMKSSVQEECVSTISSSKDEDPLAATREFIEMWRLLGREVP 109 P+NE EL+ K K + V+ K + L A W L ++ Sbjct: 660 PENEDMFSPSELDTSKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKTQLQ 719 Query: 110 EHITEE------------ELKTLMECVSNTAKKKYLKYLYTKEKVKKARQI-----KKEM 152 ++I E E +TL V+ K+ +Y ++K KA+++ +KE+ Sbjct: 720 QNIEENKERMLKLESYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKEL 779 Query: 153 KAAAREEAKNIKLLETTEEDKQKNFL 178 R+EA+ K+ ED +K L Sbjct: 780 DFIKRQEAERKKI-----EDLEKAHL 800 >gi|194294523 intersectin 2 isoform 3 [Homo sapiens] Length = 1670 Score = 32.0 bits (71), Expect = 1.0 Identities = 70/364 (19%), Positives = 133/364 (36%), Gaps = 68/364 (18%) Query: 43 KIPAVTYPKNESTPPSEELELDKWKTTMKSSVQEECVSTISSSKDEDPLAATREFIEMWR 102 K+P K ++ +EL+K + + Q E K+E W Sbjct: 358 KLPVTFEDKRKANYERGNMELEKRRQALMEQQQREAERKAQKEKEE------------WE 405 Query: 103 LLGREVPEHITEEELKTLMECVSNTAKKKYLKYLYTKEK---VKKARQIKKEMKAAAREE 159 RE + E+E K +E K++ L+ +E+ +++ K+E++ R E Sbjct: 406 RKQRE----LQEQEWKKQLELEKRLEKQRELERQREEERRKDIERREAAKQELERQRRLE 461 Query: 160 AKNIKLLETTEEDKQKNFLFLRLWDRNMDIAMGWKGAQAMQFGQPLVFDMAYENYMKRKE 219 + I+ E + ++ +RL + ++ + + G+ ++ +K+ Sbjct: 462 WERIRRQELLNQKNREQEEIVRLNSKKKNLHLELEALN----GKHQQISGRLQDVRLKKQ 517 Query: 220 LQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRELVKRYQEKWDKLLLTSTEKSHV 279 Q T ++L+ + C+L+I ++L + QE +KL+ EK + Sbjct: 518 TQKTELEVLDKQ--------------CDLEIMEI--KQLQQELQEYQNKLIYLVPEKQLL 561 Query: 280 DLFPKDSIIYLTADSPNVMTTFRHDKVYVIGSFVDKSMQPGTSLAKAKRLNLATECLPLD 339 + K+ T DS G SL K L C L Sbjct: 562 NERIKNMQFSNTPDS-------------------------GVSLLHKKSLEKEELCQRLK 596 Query: 340 KY---LQWEIGNKNLTLDQMIRILLCLKNNGNWQE-ALQFVPKRKHTGFLEISQHSQEFI 395 + L+ E +K +D L L+ N Q+ AL+ + K K EI + E + Sbjct: 597 EQLDALEKETASKLSEMDSFNNQLKELRETYNTQQLALEQLYKIKRDKLKEIERKRLELM 656 Query: 396 NRLK 399 + K Sbjct: 657 QKKK 660 >gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] Length = 983 Score = 31.6 bits (70), Expect = 1.3 Identities = 44/214 (20%), Positives = 99/214 (46%), Gaps = 19/214 (8%) Query: 31 NNLTILQRYMSSKIPAVTYPKNESTPPSEELELDKWKTTMKSSVQE--ECVSTIS---SS 85 N LT L++ + ++ K S +E L++ TT++++ +E E +S + +S Sbjct: 714 NELTQLKQLVDAQ-------KENSVSITEHLQVI---TTLRTAAKEMEEKISNLKEHLAS 763 Query: 86 KDEDPLAATREFIEMWRLLGREVPEHITEEELKTLMECVSNTAKKKYLKYLYTKEKV-KK 144 K+ + ++ +E + + + E+L++ +E + K + + KEKV + Sbjct: 764 KEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSE 823 Query: 145 ARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFL--FLRLWDRNMDIAMGWKGAQAMQFG 202 QI+ E+ RE+ +NI+ L ++E + L F + + ++ + + ++ Sbjct: 824 VVQIRSEVSQVKREK-ENIQTLLKSKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEED 882 Query: 203 QPLVFDMAYENYMKRKELQNTVSQLLESEGWNRR 236 + + + K KE N++SQL S ++R Sbjct: 883 KDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKR 916 >gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] Length = 972 Score = 31.6 bits (70), Expect = 1.3 Identities = 44/214 (20%), Positives = 99/214 (46%), Gaps = 19/214 (8%) Query: 31 NNLTILQRYMSSKIPAVTYPKNESTPPSEELELDKWKTTMKSSVQE--ECVSTIS---SS 85 N LT L++ + ++ K S +E L++ TT++++ +E E +S + +S Sbjct: 703 NELTQLKQLVDAQ-------KENSVSITEHLQVI---TTLRTAAKEMEEKISNLKEHLAS 752 Query: 86 KDEDPLAATREFIEMWRLLGREVPEHITEEELKTLMECVSNTAKKKYLKYLYTKEKV-KK 144 K+ + ++ +E + + + E+L++ +E + K + + KEKV + Sbjct: 753 KEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSE 812 Query: 145 ARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFL--FLRLWDRNMDIAMGWKGAQAMQFG 202 QI+ E+ RE+ +NI+ L ++E + L F + + ++ + + ++ Sbjct: 813 VVQIRSEVSQVKREK-ENIQTLLKSKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEED 871 Query: 203 QPLVFDMAYENYMKRKELQNTVSQLLESEGWNRR 236 + + + K KE N++SQL S ++R Sbjct: 872 KDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKR 905 >gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] Length = 951 Score = 31.6 bits (70), Expect = 1.3 Identities = 44/214 (20%), Positives = 99/214 (46%), Gaps = 19/214 (8%) Query: 31 NNLTILQRYMSSKIPAVTYPKNESTPPSEELELDKWKTTMKSSVQE--ECVSTIS---SS 85 N LT L++ + ++ K S +E L++ TT++++ +E E +S + +S Sbjct: 682 NELTQLKQLVDAQ-------KENSVSITEHLQVI---TTLRTAAKEMEEKISNLKEHLAS 731 Query: 86 KDEDPLAATREFIEMWRLLGREVPEHITEEELKTLMECVSNTAKKKYLKYLYTKEKV-KK 144 K+ + ++ +E + + + E+L++ +E + K + + KEKV + Sbjct: 732 KEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSE 791 Query: 145 ARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFL--FLRLWDRNMDIAMGWKGAQAMQFG 202 QI+ E+ RE+ +NI+ L ++E + L F + + ++ + + ++ Sbjct: 792 VVQIRSEVSQVKREK-ENIQTLLKSKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEED 850 Query: 203 QPLVFDMAYENYMKRKELQNTVSQLLESEGWNRR 236 + + + K KE N++SQL S ++R Sbjct: 851 KDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKR 884 >gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] Length = 980 Score = 31.6 bits (70), Expect = 1.3 Identities = 44/214 (20%), Positives = 99/214 (46%), Gaps = 19/214 (8%) Query: 31 NNLTILQRYMSSKIPAVTYPKNESTPPSEELELDKWKTTMKSSVQE--ECVSTIS---SS 85 N LT L++ + ++ K S +E L++ TT++++ +E E +S + +S Sbjct: 711 NELTQLKQLVDAQ-------KENSVSITEHLQVI---TTLRTAAKEMEEKISNLKEHLAS 760 Query: 86 KDEDPLAATREFIEMWRLLGREVPEHITEEELKTLMECVSNTAKKKYLKYLYTKEKV-KK 144 K+ + ++ +E + + + E+L++ +E + K + + KEKV + Sbjct: 761 KEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSE 820 Query: 145 ARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFL--FLRLWDRNMDIAMGWKGAQAMQFG 202 QI+ E+ RE+ +NI+ L ++E + L F + + ++ + + ++ Sbjct: 821 VVQIRSEVSQVKREK-ENIQTLLKSKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEED 879 Query: 203 QPLVFDMAYENYMKRKELQNTVSQLLESEGWNRR 236 + + + K KE N++SQL S ++R Sbjct: 880 KDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKR 913 >gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] Length = 980 Score = 31.6 bits (70), Expect = 1.3 Identities = 44/214 (20%), Positives = 99/214 (46%), Gaps = 19/214 (8%) Query: 31 NNLTILQRYMSSKIPAVTYPKNESTPPSEELELDKWKTTMKSSVQE--ECVSTIS---SS 85 N LT L++ + ++ K S +E L++ TT++++ +E E +S + +S Sbjct: 711 NELTQLKQLVDAQ-------KENSVSITEHLQVI---TTLRTAAKEMEEKISNLKEHLAS 760 Query: 86 KDEDPLAATREFIEMWRLLGREVPEHITEEELKTLMECVSNTAKKKYLKYLYTKEKV-KK 144 K+ + ++ +E + + + E+L++ +E + K + + KEKV + Sbjct: 761 KEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSE 820 Query: 145 ARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFL--FLRLWDRNMDIAMGWKGAQAMQFG 202 QI+ E+ RE+ +NI+ L ++E + L F + + ++ + + ++ Sbjct: 821 VVQIRSEVSQVKREK-ENIQTLLKSKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEED 879 Query: 203 QPLVFDMAYENYMKRKELQNTVSQLLESEGWNRR 236 + + + K KE N++SQL S ++R Sbjct: 880 KDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKR 913 >gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] Length = 980 Score = 31.6 bits (70), Expect = 1.3 Identities = 44/214 (20%), Positives = 99/214 (46%), Gaps = 19/214 (8%) Query: 31 NNLTILQRYMSSKIPAVTYPKNESTPPSEELELDKWKTTMKSSVQE--ECVSTIS---SS 85 N LT L++ + ++ K S +E L++ TT++++ +E E +S + +S Sbjct: 711 NELTQLKQLVDAQ-------KENSVSITEHLQVI---TTLRTAAKEMEEKISNLKEHLAS 760 Query: 86 KDEDPLAATREFIEMWRLLGREVPEHITEEELKTLMECVSNTAKKKYLKYLYTKEKV-KK 144 K+ + ++ +E + + + E+L++ +E + K + + KEKV + Sbjct: 761 KEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSE 820 Query: 145 ARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFL--FLRLWDRNMDIAMGWKGAQAMQFG 202 QI+ E+ RE+ +NI+ L ++E + L F + + ++ + + ++ Sbjct: 821 VVQIRSEVSQVKREK-ENIQTLLKSKEQEVNELLQKFQQAQEELAEMKRYAESSSKLEED 879 Query: 203 QPLVFDMAYENYMKRKELQNTVSQLLESEGWNRR 236 + + + K KE N++SQL S ++R Sbjct: 880 KDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKR 913 >gi|153791218 hypothetical protein LOC115749 [Homo sapiens] Length = 462 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Query: 106 REVPEHITEEELKTLM--ECVSNTAKKKYL-KYLYTKEKVKKARQIKKEMKAAAREEAKN 162 RE+ +HI T++ EC + + +K+L + +TK KK ++ K + +E+++ Sbjct: 97 REISQHIRIIYSSTVLKKECKKSNSVRKFLFPFHHTKANNKKVKEEKNGLAFWRSKESRS 156 Query: 163 IKLLETTEEDKQKNFLFLR 181 +K E+K K+F L+ Sbjct: 157 LKESPLRSEEKIKHFSQLK 175 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/54 (29%), Positives = 28/54 (51%) Query: 136 LYTKEKVKKARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFLFLRLWDRNMDI 189 L ++EK+K Q+K E+ + + LL + QKNF+ RL+ + D+ Sbjct: 162 LRSEEKIKHFSQLKSELFLKDNSLRRILSLLMELKVAAQKNFILKRLFWKTSDL 215 >gi|46852390 coiled-coil domain containing 6 [Homo sapiens] Length = 474 Score = 31.6 bits (70), Expect = 1.3 Identities = 66/269 (24%), Positives = 109/269 (40%), Gaps = 36/269 (13%) Query: 23 PFTLHRKRNNLTILQRYMSS-KIPAVTYPKNESTPPSEELELDKWKTTMKSSVQ--EECV 79 PF L N L LQ+ KI TY E +L K T+++ + EE + Sbjct: 53 PFRLEELTNRLASLQQENKVLKIELETYKLKCKALQEENRDLRKASVTIQARAEQEEEFI 112 Query: 80 STISSSKDEDPLAATREFIEMWRLLGREVPEHITEEELKTLMECVSNTAK-KKYLKYLYT 138 S K + A ++ E + + E +T E + LM+ A+ +++L+ Sbjct: 113 SNTLFKK----IQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQE 168 Query: 139 KEKVKKARQIKKE-----MKAAAREEAKNIKL-LETTEEDKQKNFLFLRLWDRNMDIAMG 192 + K ++IKK K E+ + K+ LE T E +Q+ L RLW R MD Sbjct: 169 FQVNKLMKKIKKLENDTISKQLTLEQLRREKIDLENTLEQEQEA-LVNRLWKR-MDKLEA 226 Query: 193 WKGAQAMQFGQPLVF-----DMAYE---------------NYMKRKELQNTVSQLLESEG 232 K + QP+ D++ E N ++R + Q +QL SE Sbjct: 227 EKRILQEKLDQPVSAPPSPRDISMEIDSPENMMRHIRFLKNEVERLKKQLRAAQLQHSEK 286 Query: 233 WNRRNVDPFHIYFCNLKIDGALHRELVKR 261 + + H+ NL++ L RE+ +R Sbjct: 287 MAQYLEEERHMREENLRLQRKLQREMERR 315 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.132 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,427,957 Number of Sequences: 37866 Number of extensions: 616613 Number of successful extensions: 2691 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 74 Number of HSP's that attempted gapping in prelim test: 2614 Number of HSP's gapped (non-prelim): 126 length of query: 403 length of database: 18,247,518 effective HSP length: 105 effective length of query: 298 effective length of database: 14,271,588 effective search space: 4252933224 effective search space used: 4252933224 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.