Guide to the Human Genome
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Name: RG9MTD3 Sequence: fasta or formatted (316aa) NCBI GI: 117606330
Description:

RNA (guanine-9-) methyltransferase domain containing 3

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         16           2
 C cysteine            2.2          7           1
 D aspartate           4.7         15           1
 E glutamate           9.8         31           2
 F phenylalanine       2.8          9           1
 G glycine             6.6         21           2
 H histidine           2.2          7           1
 I isoleucine          5.1         16           1
 K lysine              8.9         28           2
 L leucine            10.8         34           2
 M methionine          1.6          5           1
 N asparagine          3.8         12           1
 P proline             3.5         11           1
 Q glutamine           5.1         16           1
 R arginine            5.7         18           2
 S serine              7.3         23           2
 T threonine           5.1         16           2
 V valine              4.7         15           1
 W tryptophan          1.6          5           1
 Y tyrosine            3.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA (guanine-9-) methyltransferase domain containin... 
RG9MTD2               0.157   RNA (guanine-9-) methyltransferase domain containin...
RG9MTD2               0.157   RNA (guanine-9-) methyltransferase domain containin...
RG9MTD2               0.157   RNA (guanine-9-) methyltransferase domain containing...
RG9MTD1               0.115   RNA (guanine-9-) methyltransferase domain containin...
SURF6                 0.011   surfeit 6 
TOP2B                 0.011   DNA topoisomerase II, beta isozyme 
UBXN6                 0.011   UBX domain protein 6 
PPIG                  0.010   peptidylprolyl isomerase G 
LOC643446             0.008   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.008   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.008   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.008   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.008   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.008   PREDICTED: similar to ribonucleic acid binding prote...
UPF2                  0.008   UPF2 regulator of nonsense transcripts homolog [Homo...
UPF2                  0.008   UPF2 regulator of nonsense transcripts homolog [Homo...
RNPS1                 0.008   RNA-binding protein S1, serine-rich domain 
RNPS1                 0.008   RNA-binding protein S1, serine-rich domain 
PBRM1                 0.008   polybromo 1 isoform 1 
PBRM1                 0.008   polybromo 1 isoform 2 
PBRM1                 0.008   polybromo 1 isoform 4 
KARS                  0.008   lysyl-tRNA synthetase isoform 2 
BAZ1A                 0.008   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.008   bromodomain adjacent to zinc finger domain, 1A isofo...
PPP1R9A               0.008   protein phosphatase 1, regulatory (inhibitor) subuni...
AGBL2                 0.006   carboxypeptidase 2, cytosolic 
CCDC59                0.006   coiled-coil domain containing 59 
EVI5L                 0.006   ecotropic viral integration site 5-like isoform 2 [H...
CTCF                  0.006   CCCTC-binding factor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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