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Search of human proteins with 117606351
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|117606351 F-box protein 43 isoform b [Homo sapiens]
(708 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|117606351 F-box protein 43 isoform b [Homo sapiens] 1401 0.0
gi|117606347 F-box protein 43 isoform a [Homo sapiens] 1336 0.0
gi|215982802 F-box only protein 5 isoform b [Homo sapiens] 149 1e-35
gi|6912366 F-box only protein 5 isoform a [Homo sapiens] 149 1e-35
gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens] 47 6e-05
gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens] 47 6e-05
gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens] 47 6e-05
gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens] 47 6e-05
gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens] 47 6e-05
gi|31657094 anillin, actin binding protein [Homo sapiens] 39 0.013
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 37 0.048
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap... 37 0.048
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens] 37 0.063
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens] 37 0.063
gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo sa... 36 0.14
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi... 35 0.31
gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo ... 34 0.41
gi|219842214 protein phosphatase 1, regulatory (inhibitor) subun... 34 0.41
gi|219842212 protein phosphatase 1, regulatory (inhibitor) subun... 34 0.41
gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit... 34 0.41
gi|38261962 activating transcription factor 7 interacting protei... 34 0.41
gi|4506339 peroxisomal biogenesis factor 19 isoform a [Homo sapi... 34 0.41
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 34 0.41
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 34 0.41
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 34 0.41
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 34 0.41
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 34 0.41
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 34 0.41
gi|35493801 ring finger protein 19 [Homo sapiens] 34 0.41
gi|35493782 ring finger protein 19 [Homo sapiens] 34 0.41
>gi|117606351 F-box protein 43 isoform b [Homo sapiens]
Length = 708
Score = 1401 bits (3627), Expect = 0.0
Identities = 708/708 (100%), Positives = 708/708 (100%)
Query: 1 MSFKDKDERISCLEAYVTLTSKSSRFTDETEILKMSQRHSGQAGTEAGNGADSPPIVNSK 60
MSFKDKDERISCLEAYVTLTSKSSRFTDETEILKMSQRHSGQAGTEAGNGADSPPIVNSK
Sbjct: 1 MSFKDKDERISCLEAYVTLTSKSSRFTDETEILKMSQRHSGQAGTEAGNGADSPPIVNSK 60
Query: 61 YSTFRDFCSTSSFQDSGYNELKSCSFDNIDKEYLGKKEKGPTLLYEHPETSGLGLTHPLE 120
YSTFRDFCSTSSFQDSGYNELKSCSFDNIDKEYLGKKEKGPTLLYEHPETSGLGLTHPLE
Sbjct: 61 YSTFRDFCSTSSFQDSGYNELKSCSFDNIDKEYLGKKEKGPTLLYEHPETSGLGLTHPLE 120
Query: 121 SPTQKKKCILPRKEKDKTPELCETPKISGKKCLPRRRLNVSFALLKGDFESQNSSLESSI 180
SPTQKKKCILPRKEKDKTPELCETPKISGKKCLPRRRLNVSFALLKGDFESQNSSLESSI
Sbjct: 121 SPTQKKKCILPRKEKDKTPELCETPKISGKKCLPRRRLNVSFALLKGDFESQNSSLESSI 180
Query: 181 SQVINLEKNIPSSASGFSRANNFSPLVTSTLKTEEVTSCSQKLRLNFSQQKTSTIDDSKD 240
SQVINLEKNIPSSASGFSRANNFSPLVTSTLKTEEVTSCSQKLRLNFSQQKTSTIDDSKD
Sbjct: 181 SQVINLEKNIPSSASGFSRANNFSPLVTSTLKTEEVTSCSQKLRLNFSQQKTSTIDDSKD 240
Query: 241 DCSLFEVECISPIQGNNFKDSITHDFSDSSLCINDENACPELLGSSVSGTTCGTDEDIFV 300
DCSLFEVECISPIQGNNFKDSITHDFSDSSLCINDENACPELLGSSVSGTTCGTDEDIFV
Sbjct: 241 DCSLFEVECISPIQGNNFKDSITHDFSDSSLCINDENACPELLGSSVSGTTCGTDEDIFV 300
Query: 301 TPISNLVANIRFNASQILSPSPEVRGSISTPEDSGFNSLSLEKSEDSLSDQEGSFQELLQ 360
TPISNLVANIRFNASQILSPSPEVRGSISTPEDSGFNSLSLEKSEDSLSDQEGSFQELLQ
Sbjct: 301 TPISNLVANIRFNASQILSPSPEVRGSISTPEDSGFNSLSLEKSEDSLSDQEGSFQELLQ 360
Query: 361 KHKGTPKVGDTIRKTRHLGRSRRLSTLREQSSQSETEEEKQIVHPDSEKRAAAASAISEG 420
KHKGTPKVGDTIRKTRHLGRSRRLSTLREQSSQSETEEEKQIVHPDSEKRAAAASAISEG
Sbjct: 361 KHKGTPKVGDTIRKTRHLGRSRRLSTLREQSSQSETEEEKQIVHPDSEKRAAAASAISEG 420
Query: 421 QLSSDESGDLTFSLKNLSKTPALQLVHELFMKSKRKRLQENSGHEFLEQGDGEKIAVLQC 480
QLSSDESGDLTFSLKNLSKTPALQLVHELFMKSKRKRLQENSGHEFLEQGDGEKIAVLQC
Sbjct: 421 QLSSDESGDLTFSLKNLSKTPALQLVHELFMKSKRKRLQENSGHEFLEQGDGEKIAVLQC 480
Query: 481 ILAGLIGKKMGIEKLDILTELKYRNLKHILAMVLESLTAESLCSVWKVSRNWREIVVQDK 540
ILAGLIGKKMGIEKLDILTELKYRNLKHILAMVLESLTAESLCSVWKVSRNWREIVVQDK
Sbjct: 481 ILAGLIGKKMGIEKLDILTELKYRNLKHILAMVLESLTAESLCSVWKVSRNWREIVVQDK 540
Query: 541 NANRRRKFYITQLKTDSEGAVLNVEDAATRLQLLNRSALRSVQAQARIPGSQREQGSTLS 600
NANRRRKFYITQLKTDSEGAVLNVEDAATRLQLLNRSALRSVQAQARIPGSQREQGSTLS
Sbjct: 541 NANRRRKFYITQLKTDSEGAVLNVEDAATRLQLLNRSALRSVQAQARIPGSQREQGSTLS 600
Query: 601 PWGEVLTPLASSSVTHLSSKQEEYVKVAKTLFTDEALKPCPRCQSPAKYQPYKKRGLCSR 660
PWGEVLTPLASSSVTHLSSKQEEYVKVAKTLFTDEALKPCPRCQSPAKYQPYKKRGLCSR
Sbjct: 601 PWGEVLTPLASSSVTHLSSKQEEYVKVAKTLFTDEALKPCPRCQSPAKYQPYKKRGLCSR 660
Query: 661 TACGFDFCVLCLCAYHGSEECSRGAAKPRNRKDALPGSAQSKRNLKRL 708
TACGFDFCVLCLCAYHGSEECSRGAAKPRNRKDALPGSAQSKRNLKRL
Sbjct: 661 TACGFDFCVLCLCAYHGSEECSRGAAKPRNRKDALPGSAQSKRNLKRL 708
>gi|117606347 F-box protein 43 isoform a [Homo sapiens]
Length = 674
Score = 1336 bits (3458), Expect = 0.0
Identities = 674/674 (100%), Positives = 674/674 (100%)
Query: 35 MSQRHSGQAGTEAGNGADSPPIVNSKYSTFRDFCSTSSFQDSGYNELKSCSFDNIDKEYL 94
MSQRHSGQAGTEAGNGADSPPIVNSKYSTFRDFCSTSSFQDSGYNELKSCSFDNIDKEYL
Sbjct: 1 MSQRHSGQAGTEAGNGADSPPIVNSKYSTFRDFCSTSSFQDSGYNELKSCSFDNIDKEYL 60
Query: 95 GKKEKGPTLLYEHPETSGLGLTHPLESPTQKKKCILPRKEKDKTPELCETPKISGKKCLP 154
GKKEKGPTLLYEHPETSGLGLTHPLESPTQKKKCILPRKEKDKTPELCETPKISGKKCLP
Sbjct: 61 GKKEKGPTLLYEHPETSGLGLTHPLESPTQKKKCILPRKEKDKTPELCETPKISGKKCLP 120
Query: 155 RRRLNVSFALLKGDFESQNSSLESSISQVINLEKNIPSSASGFSRANNFSPLVTSTLKTE 214
RRRLNVSFALLKGDFESQNSSLESSISQVINLEKNIPSSASGFSRANNFSPLVTSTLKTE
Sbjct: 121 RRRLNVSFALLKGDFESQNSSLESSISQVINLEKNIPSSASGFSRANNFSPLVTSTLKTE 180
Query: 215 EVTSCSQKLRLNFSQQKTSTIDDSKDDCSLFEVECISPIQGNNFKDSITHDFSDSSLCIN 274
EVTSCSQKLRLNFSQQKTSTIDDSKDDCSLFEVECISPIQGNNFKDSITHDFSDSSLCIN
Sbjct: 181 EVTSCSQKLRLNFSQQKTSTIDDSKDDCSLFEVECISPIQGNNFKDSITHDFSDSSLCIN 240
Query: 275 DENACPELLGSSVSGTTCGTDEDIFVTPISNLVANIRFNASQILSPSPEVRGSISTPEDS 334
DENACPELLGSSVSGTTCGTDEDIFVTPISNLVANIRFNASQILSPSPEVRGSISTPEDS
Sbjct: 241 DENACPELLGSSVSGTTCGTDEDIFVTPISNLVANIRFNASQILSPSPEVRGSISTPEDS 300
Query: 335 GFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVGDTIRKTRHLGRSRRLSTLREQSSQS 394
GFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVGDTIRKTRHLGRSRRLSTLREQSSQS
Sbjct: 301 GFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVGDTIRKTRHLGRSRRLSTLREQSSQS 360
Query: 395 ETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLKNLSKTPALQLVHELFMKSK 454
ETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLKNLSKTPALQLVHELFMKSK
Sbjct: 361 ETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLKNLSKTPALQLVHELFMKSK 420
Query: 455 RKRLQENSGHEFLEQGDGEKIAVLQCILAGLIGKKMGIEKLDILTELKYRNLKHILAMVL 514
RKRLQENSGHEFLEQGDGEKIAVLQCILAGLIGKKMGIEKLDILTELKYRNLKHILAMVL
Sbjct: 421 RKRLQENSGHEFLEQGDGEKIAVLQCILAGLIGKKMGIEKLDILTELKYRNLKHILAMVL 480
Query: 515 ESLTAESLCSVWKVSRNWREIVVQDKNANRRRKFYITQLKTDSEGAVLNVEDAATRLQLL 574
ESLTAESLCSVWKVSRNWREIVVQDKNANRRRKFYITQLKTDSEGAVLNVEDAATRLQLL
Sbjct: 481 ESLTAESLCSVWKVSRNWREIVVQDKNANRRRKFYITQLKTDSEGAVLNVEDAATRLQLL 540
Query: 575 NRSALRSVQAQARIPGSQREQGSTLSPWGEVLTPLASSSVTHLSSKQEEYVKVAKTLFTD 634
NRSALRSVQAQARIPGSQREQGSTLSPWGEVLTPLASSSVTHLSSKQEEYVKVAKTLFTD
Sbjct: 541 NRSALRSVQAQARIPGSQREQGSTLSPWGEVLTPLASSSVTHLSSKQEEYVKVAKTLFTD 600
Query: 635 EALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRGAAKPRNRKDA 694
EALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRGAAKPRNRKDA
Sbjct: 601 EALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRGAAKPRNRKDA 660
Query: 695 LPGSAQSKRNLKRL 708
LPGSAQSKRNLKRL
Sbjct: 661 LPGSAQSKRNLKRL 674
>gi|215982802 F-box only protein 5 isoform b [Homo sapiens]
Length = 401
Score = 149 bits (375), Expect = 1e-35
Identities = 118/383 (30%), Positives = 189/383 (49%), Gaps = 41/383 (10%)
Query: 352 EGSFQELLQKHK-----GTPKVG------DTIRKTRHLGRSRRLSTLREQSSQSETEEEK 400
EGS ++ ++ ++ G+P V +T K H ++ + +++ E E
Sbjct: 34 EGSCKDCIKDYERLSCIGSPIVSPRIVQLETESKRLHNKENQHVQQTLNSTNEIEALETS 93
Query: 401 QIVHPDSEKRAAAASAISE---GQLSSDESGDLTFSLKNLSKTP-------ALQLVH--E 448
++ + S +SE G L + GD S ++P L ++H +
Sbjct: 94 RLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQIQSPDQYPNKNLLPVLHFEK 153
Query: 449 LFMKSKRKRLQENS--GHEFLEQGDGEKIAVLQCILAGLIGKKMGIEKLDILTELKYRNL 506
+ + +K + N E L+ E IA L +IG+KMG+E +DIL+EL R L
Sbjct: 154 VVCSTLKKNAKRNPKVDREMLK----EIIARGNFRLQNIIGRKMGLECVDILSELFRRGL 209
Query: 507 KHILAMVLESLTAESLCSVWKVSRNWREIVVQDKNANRRRKFYITQLKTDSEGAVLNVED 566
+H+LA +L L+ L +V KVS W++I+ DK A + Y ++ +E
Sbjct: 210 RHVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQ---LYSKAIQRVTENNNKFSPH 266
Query: 567 AATRLQLLNRSALRSVQAQARIPGSQREQGSTLSPWGEVLTPLASSSVTHLSSKQEEYVK 626
A+TR ++ R+ L SVQ A +++ + LS G+ T+ S+ E+ +
Sbjct: 267 ASTREYVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGD------QKGSTY--SRHNEFSE 318
Query: 627 VAKTLFTDEALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRG-A 685
VAKTL +E+LK C RC SPAKY Y +R C R CGFD+C CLC YH +++CS G
Sbjct: 319 VAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCSDGKL 378
Query: 686 AKPRNRKDALPGSAQSKRNLKRL 708
K + LPG+ +SK+NL+RL
Sbjct: 379 LKASCKIGPLPGTKKSKKNLRRL 401
>gi|6912366 F-box only protein 5 isoform a [Homo sapiens]
Length = 447
Score = 149 bits (375), Expect = 1e-35
Identities = 118/383 (30%), Positives = 189/383 (49%), Gaps = 41/383 (10%)
Query: 352 EGSFQELLQKHK-----GTPKVG------DTIRKTRHLGRSRRLSTLREQSSQSETEEEK 400
EGS ++ ++ ++ G+P V +T K H ++ + +++ E E
Sbjct: 80 EGSCKDCIKDYERLSCIGSPIVSPRIVQLETESKRLHNKENQHVQQTLNSTNEIEALETS 139
Query: 401 QIVHPDSEKRAAAASAISE---GQLSSDESGDLTFSLKNLSKTP-------ALQLVH--E 448
++ + S +SE G L + GD S ++P L ++H +
Sbjct: 140 RLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQIQSPDQYPNKNLLPVLHFEK 199
Query: 449 LFMKSKRKRLQENS--GHEFLEQGDGEKIAVLQCILAGLIGKKMGIEKLDILTELKYRNL 506
+ + +K + N E L+ E IA L +IG+KMG+E +DIL+EL R L
Sbjct: 200 VVCSTLKKNAKRNPKVDREMLK----EIIARGNFRLQNIIGRKMGLECVDILSELFRRGL 255
Query: 507 KHILAMVLESLTAESLCSVWKVSRNWREIVVQDKNANRRRKFYITQLKTDSEGAVLNVED 566
+H+LA +L L+ L +V KVS W++I+ DK A + Y ++ +E
Sbjct: 256 RHVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQ---LYSKAIQRVTENNNKFSPH 312
Query: 567 AATRLQLLNRSALRSVQAQARIPGSQREQGSTLSPWGEVLTPLASSSVTHLSSKQEEYVK 626
A+TR ++ R+ L SVQ A +++ + LS G+ T+ S+ E+ +
Sbjct: 313 ASTREYVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGD------QKGSTY--SRHNEFSE 364
Query: 627 VAKTLFTDEALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRG-A 685
VAKTL +E+LK C RC SPAKY Y +R C R CGFD+C CLC YH +++CS G
Sbjct: 365 VAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCSDGKL 424
Query: 686 AKPRNRKDALPGSAQSKRNLKRL 708
K + LPG+ +SK+NL+RL
Sbjct: 425 LKASCKIGPLPGTKKSKKNLRRL 447
>gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 47.0 bits (110), Expect = 6e-05
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 631 LFTDEALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRGAAKPRN 690
L D P P CQ P +P G+CS +C F FC LC YHG C A K +
Sbjct: 302 LMADVVYCPRPCCQLPVMQEPGCTMGICS--SCNFAFCTLCRLTYHGVSPCKVTAEKLMD 359
Query: 691 -RKDALPGSAQSKRNL 705
R + L +KR L
Sbjct: 360 LRNEYLQADEANKRLL 375
>gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 47.0 bits (110), Expect = 6e-05
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 631 LFTDEALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRGAAKPRN 690
L D P P CQ P +P G+CS +C F FC LC YHG C A K +
Sbjct: 302 LMADVVYCPRPCCQLPVMQEPGCTMGICS--SCNFAFCTLCRLTYHGVSPCKVTAEKLMD 359
Query: 691 -RKDALPGSAQSKRNL 705
R + L +KR L
Sbjct: 360 LRNEYLQADEANKRLL 375
>gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 47.0 bits (110), Expect = 6e-05
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 631 LFTDEALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRGAAKPRN 690
L D P P CQ P +P G+CS +C F FC LC YHG C A K +
Sbjct: 302 LMADVVYCPRPCCQLPVMQEPGCTMGICS--SCNFAFCTLCRLTYHGVSPCKVTAEKLMD 359
Query: 691 -RKDALPGSAQSKRNL 705
R + L +KR L
Sbjct: 360 LRNEYLQADEANKRLL 375
>gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens]
Length = 348
Score = 47.0 bits (110), Expect = 6e-05
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 631 LFTDEALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRGAAKPRN 690
L D P P CQ P +P G+CS +C F FC LC YHG C A K +
Sbjct: 176 LMADVVYCPRPCCQLPVMQEPGCTMGICS--SCNFAFCTLCRLTYHGVSPCKVTAEKLMD 233
Query: 691 -RKDALPGSAQSKRNL 705
R + L +KR L
Sbjct: 234 LRNEYLQADEANKRLL 249
>gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 47.0 bits (110), Expect = 6e-05
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 631 LFTDEALKPCPRCQSPAKYQPYKKRGLCSRTACGFDFCVLCLCAYHGSEECSRGAAKPRN 690
L D P P CQ P +P G+CS +C F FC LC YHG C A K +
Sbjct: 302 LMADVVYCPRPCCQLPVMQEPGCTMGICS--SCNFAFCTLCRLTYHGVSPCKVTAEKLMD 359
Query: 691 -RKDALPGSAQSKRNL 705
R + L +KR L
Sbjct: 360 LRNEYLQADEANKRLL 375
>gi|31657094 anillin, actin binding protein [Homo sapiens]
Length = 1124
Score = 39.3 bits (90), Expect = 0.013
Identities = 66/305 (21%), Positives = 118/305 (38%), Gaps = 31/305 (10%)
Query: 130 LPRKEKDKTPELCETPKISGKKCLPRRRLNVSFALLKGDFESQNSSLESSISQVINLEKN 189
+P +EK +P P +S P R A L S + S ++ ++++
Sbjct: 174 MPSEEKAASPP---RPLLSNASATPVGRRG-RLANLAATICSWEDDVNHSFAKQNSVQEQ 229
Query: 190 IPSSA--SGFSRANNFSPLVTSTLKTEEVTSCSQKLRLNFSQQKTSTIDDSKDDCSLFEV 247
P +A S FS A+ S + S+ +E T CSQ+ + + S DD SL
Sbjct: 230 -PGTACLSKFSSASGASARINSSSVKQEATFCSQR---DGDASLNKALSSSADDASLVNA 285
Query: 248 ECISPIQGNNFKDSITHDFSDSSLCINDENACPELLGSS-VSGTTCGTDEDIFVTPISNL 306
S ++ + S T +D+ C E PELL + +S G + I + +S
Sbjct: 286 SISSSVKATSPVKSTT-SITDAKSC---EGQNPELLPKTPISPLKTGVSKPIVKSTLSQT 341
Query: 307 VANIRFNASQILSPSPEVRGSISTPEDSGFNSLSLEKSEDSLSDQEGSFQELLQKHKGTP 366
V + + S+ + + + +TP +G LE+ F E Q+H
Sbjct: 342 VPS-KGELSREICLQSQSKDKSTTPGGTGIKPF-LER-----------FGERCQEHSKES 388
Query: 367 KVGDTIRKTRHLGRSRRL---STLREQSSQSETEEEKQIVHPDSEKRAAAASAISEGQLS 423
T +T + + + ++ +S S T +Q+ ++ A +G +
Sbjct: 389 PARSTPHRTPIITPNTKAIQERLFKQDTSSSTTHLAQQLKQERQKELACLRGRFDKGNIW 448
Query: 424 SDESG 428
S E G
Sbjct: 449 SAEKG 453
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 37.4 bits (85), Expect = 0.048
Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 9/148 (6%)
Query: 319 SPSPEVRGSISTPEDSGFNSLSLEKSED--SLSDQEGSFQELLQKHKGTPKVGDTIRKTR 376
SPS E R S S D N S +S D + DQ G+ KHKG K + R
Sbjct: 611 SPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAK-----EQER 665
Query: 377 HLGRSRRLSTLREQSSQSETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLKN 436
RSR + R++ + E+ + + + + +L + TFS
Sbjct: 666 KKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSG 725
Query: 437 LSKTPALQLVHELFMKSKRKRLQENSGH 464
++ H+ SK+ +++ H
Sbjct: 726 SISVKIIR--HDSRQDSKKSTTKDSKKH 751
>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 37.4 bits (85), Expect = 0.048
Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 9/148 (6%)
Query: 319 SPSPEVRGSISTPEDSGFNSLSLEKSED--SLSDQEGSFQELLQKHKGTPKVGDTIRKTR 376
SPS E R S S D N S +S D + DQ G+ KHKG K + R
Sbjct: 611 SPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAK-----EQER 665
Query: 377 HLGRSRRLSTLREQSSQSETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLKN 436
RSR + R++ + E+ + + + + +L + TFS
Sbjct: 666 KKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSG 725
Query: 437 LSKTPALQLVHELFMKSKRKRLQENSGH 464
++ H+ SK+ +++ H
Sbjct: 726 SISVKIIR--HDSRQDSKKSTTKDSKKH 751
>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
Length = 338
Score = 37.0 bits (84), Expect = 0.063
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Query: 310 IRFNASQILSPSPEVRGSISTPEDSGFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVG 369
+R S PS + PE S L LEK+ LS +G H G+ K
Sbjct: 75 VRTKGSGAALPSRPASRAAPRPEASS-PPLPLEKARGGLSGPQGGRARGAMAHVGSRKRS 133
Query: 370 DTIRKTRHLGRSRRLSTLREQSSQ---SETEEEKQIVHPDSEKRAAAASAISEGQLSSDE 426
+ ++R G +R R+ +S+ + T +E+ R++++S+ S SS
Sbjct: 134 RSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKARRRTRSSSSSSSSSSSSSSSS 193
Query: 427 SGDLTFSLKNLSKTPALQLVHELFMKSKRKRLQE 460
S + S + K K KRK+L++
Sbjct: 194 SSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKK 227
>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
Length = 341
Score = 37.0 bits (84), Expect = 0.063
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Query: 310 IRFNASQILSPSPEVRGSISTPEDSGFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVG 369
+R S PS + PE S L LEK+ LS +G H G+ K
Sbjct: 75 VRTKGSGAALPSRPASRAAPRPEASS-PPLPLEKARGGLSGPQGGRARGAMAHVGSRKRS 133
Query: 370 DTIRKTRHLGRSRRLSTLREQSSQ---SETEEEKQIVHPDSEKRAAAASAISEGQLSSDE 426
+ ++R G +R R+ +S+ + T +E+ R++++S+ S SS
Sbjct: 134 RSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKARRRTRSSSSSSSSSSSSSSSS 193
Query: 427 SGDLTFSLKNLSKTPALQLVHELFMKSKRKRLQE 460
S + S + K K KRK+L++
Sbjct: 194 SSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKK 227
>gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo
sapiens]
Length = 1089
Score = 35.8 bits (81), Expect = 0.14
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 602 WGEVLTPLASSSVTHLSSKQEEYVKVAKTLFTDEALKPCPRCQSPAKYQPYKKRGLCSRT 661
W L + L E Y A L+ KPC C+SP + C++
Sbjct: 481 WKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAK- 539
Query: 662 ACGFDFCVLCL 672
C +DFC +CL
Sbjct: 540 -CKYDFCWICL 549
>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
sapiens]
Length = 1002
Score = 34.7 bits (78), Expect = 0.31
Identities = 28/135 (20%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 106 EHPETSGLGLTHPLESPTQKKKCI--LPRKEKDKTPELCETPKISGKKCLPRRRLNVSFA 163
EH GL L++ Q + + L R+++++ EL ++ G++ RR++ +
Sbjct: 470 EHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLLELERAAELWGEQAEARRQILETM- 528
Query: 164 LLKGDFESQNSSLESSISQVINLEKNIPSSASGFSRANNFSPLVTSTLKTEEVTSCSQKL 223
++ +++ ++SQ L++ + SGF + N + +TS L++E+
Sbjct: 529 ------QNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKRELGK 582
Query: 224 RLNFSQQKTSTIDDS 238
+L Q+K S + ++
Sbjct: 583 KLGELQEKLSELKET 597
>gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo
sapiens]
Length = 3258
Score = 34.3 bits (77), Expect = 0.41
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 356 QELLQKHKGTPKVGDTIRKTRHLGRSRRLSTLREQSSQSETEEEKQIVHPDSEKRAAAAS 415
QEL+QK T K+ + R + ++++ T +QS S +E+ ++ S R+A +
Sbjct: 2083 QELIQKQVFTRKLEEVGRVLFLISLTQKIPTAHKQSHVSMLQED--LLRLPSFPRSAIDA 2140
Query: 416 AISEGQLSSDESGDLTFSLKNLSKTPALQLVHELFM 451
S S ++G F L L K+ +QL+ E+F+
Sbjct: 2141 EFS--LFSDPQAGKELFGLDTLQKSLWIQLLEEMFL 2174
Score = 31.2 bits (69), Expect = 3.5
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 376 RHLGRSRRLSTLREQSSQSETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLK 435
R + S L + + + + EE +Q P KR+ A S + +GQ+SS +F
Sbjct: 947 RRVALSALLDSAEKLAPGKKVEENEQESKPAGSKRSEAGSIVDKGQVSSAPEECRSFMSG 1006
Query: 436 NLSKTP 441
S+TP
Sbjct: 1007 RPSQTP 1012
>gi|219842214 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform b [Homo sapiens]
Length = 943
Score = 34.3 bits (77), Expect = 0.41
Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 302 PISNLVANIRFNASQILSPSPEVRGSISTPEDSGFNSLSLEKSEDSLSDQEGSFQELLQK 361
P++ V N + + + + + S + + + L+ + E+S S ++ ++ Q
Sbjct: 546 PVAPTVVNAAASTTTLTTTTAGTVSSTTEVRERRRSYLTPVRDEESESQRKARSRQARQS 605
Query: 362 HKGTPKVG--DTIRKTRHLGRSRRLSTLREQSSQSETEE-EKQIVHPDSEKRAAAASAIS 418
+ T V D + +GRSR T +++ + E EE EKQ EK+ + S
Sbjct: 606 RRSTQGVTLTDLQEAEKTIGRSRSTRTREQENEEKEKEEKEKQDKEKQEEKKESETSRED 665
Query: 419 EGQLSSDESGDLTF 432
E + + D T+
Sbjct: 666 EYKQKYSRTYDETY 679
>gi|219842212 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 34.3 bits (77), Expect = 0.41
Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 302 PISNLVANIRFNASQILSPSPEVRGSISTPEDSGFNSLSLEKSEDSLSDQEGSFQELLQK 361
P++ V N + + + + + S + + + L+ + E+S S ++ ++ Q
Sbjct: 633 PVAPTVVNAAASTTTLTTTTAGTVSSTTEVRERRRSYLTPVRDEESESQRKARSRQARQS 692
Query: 362 HKGTPKVG--DTIRKTRHLGRSRRLSTLREQSSQSETEE-EKQIVHPDSEKRAAAASAIS 418
+ T V D + +GRSR T +++ + E EE EKQ EK+ + S
Sbjct: 693 RRSTQGVTLTDLQEAEKTIGRSRSTRTREQENEEKEKEEKEKQDKEKQEEKKESETSRED 752
Query: 419 EGQLSSDESGDLTF 432
E + + D T+
Sbjct: 753 EYKQKYSRTYDETY 766
>gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 34.3 bits (77), Expect = 0.41
Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 302 PISNLVANIRFNASQILSPSPEVRGSISTPEDSGFNSLSLEKSEDSLSDQEGSFQELLQK 361
P++ V N + + + + + S + + + L+ + E+S S ++ ++ Q
Sbjct: 633 PVAPTVVNAAASTTTLTTTTAGTVSSTTEVRERRRSYLTPVRDEESESQRKARSRQARQS 692
Query: 362 HKGTPKVG--DTIRKTRHLGRSRRLSTLREQSSQSETEE-EKQIVHPDSEKRAAAASAIS 418
+ T V D + +GRSR T +++ + E EE EKQ EK+ + S
Sbjct: 693 RRSTQGVTLTDLQEAEKTIGRSRSTRTREQENEEKEKEEKEKQDKEKQEEKKESETSRED 752
Query: 419 EGQLSSDESGDLTF 432
E + + D T+
Sbjct: 753 EYKQKYSRTYDETY 766
>gi|38261962 activating transcription factor 7 interacting protein
[Homo sapiens]
Length = 1270
Score = 34.3 bits (77), Expect = 0.41
Identities = 68/330 (20%), Positives = 136/330 (41%), Gaps = 50/330 (15%)
Query: 198 SRANNFSPLVTSTLKTEEVTSCSQKLRLNFSQQKTSTIDDSK--DDC--SLFEVECISPI 253
++A+N TL+T++ T CS + N + + I + +D S E++
Sbjct: 339 NKADNNIDANEETLETDDTTICSDRPPENEKKVEEDIITELALGEDAISSSMEID----- 393
Query: 254 QGNNFKDSITHDFSDSSLCINDENACPELLGSSVSGTTCGTDEDIFVTPISNLVAN---- 309
QG +D + D ++ +EN + ++ T + D + + L +
Sbjct: 394 QGEKNEDETSADLVETI----NENVIEDNKSENILENTDSMETDEIIPILEKLAPSEDEL 449
Query: 310 IRFNASQILSPSPEVRGSISTPEDSGFNSLSLEKSEDSLSDQEG---SFQELLQKHKGTP 366
F+ + +L P E + +S F S S ++S +SL + S +E + K
Sbjct: 450 TCFSKTSLL-PIDETNPDLEEKMESSFGSPSKQESSESLPKEAFLVLSDEEDISGEKDES 508
Query: 367 KVGDTIRKTRHLGRSRRLSTLREQSSQSET--EEEKQIVHPDSEKRAAAASAISEGQLSS 424
+V + ++ S +S++ + EEE+Q++H D E R + + S + S
Sbjct: 509 EV---------ISQNETCSPAEVESNEKDNKPEEEEQVIHEDDE-RPSEKNEFSRRKRSK 558
Query: 425 DESGDLTFSLKNLSKTPALQLVHELFMKSK---RKRLQENSGHEFLEQGDGEKIAVLQCI 481
E D S + + ++ + +K ++LQ + ++ EK+ LQC
Sbjct: 559 SEDMDNVQSKRRRYMEEEYEAEFQVKITAKGDINQKLQ-----KVIQWLLEEKLCALQCA 613
Query: 482 L--AGLIGKKMGIEKLD-------ILTELK 502
+ L K +EK++ +LTEL+
Sbjct: 614 VFDKTLAELKTRVEKIECNKRHKTVLTELQ 643
>gi|4506339 peroxisomal biogenesis factor 19 isoform a [Homo
sapiens]
Length = 299
Score = 34.3 bits (77), Expect = 0.41
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 320 PSPEVRGSISTPEDSGFNSLSL-EKSEDSL-SDQEGSFQELLQKHKGTPKVGDTIRKTRH 377
PSP + + P+ SG S + ++D+L + QE FQEL + +
Sbjct: 34 PSPAPPSTTTAPDASGPQKRSPGDTAKDALFASQEKFFQELFDSELASQATAEF------ 87
Query: 378 LGRSRRLSTLREQSSQSETEEEKQIVHPDSEKRAAAASAISEGQLSSDE-SGDLTFSLKN 436
E++ + EEE +V +K + AA + S E + L +L
Sbjct: 88 -----------EKAMKELAEEEPHLVE-QFQKLSEAAGRVGSDMTSQQEFTSCLKETLSG 135
Query: 437 LSKTPALQLVHELFMKSKRKRLQENSGHEFLEQGDGEK--IAVLQCILAGLIGKKMGIEK 494
L+K A L + + + + E G +++GDGE + ++Q I+ L+ K +
Sbjct: 136 LAKN-ATDLQNSSMSEEELTKAMEGLG---MDEGDGEGNILPIMQSIMQNLLSKDVLYPS 191
Query: 495 LDILTE 500
L +TE
Sbjct: 192 LKEITE 197
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 34.3 bits (77), Expect = 0.41
Identities = 75/394 (19%), Positives = 161/394 (40%), Gaps = 56/394 (14%)
Query: 275 DENACPELLGSSVSGTTCGTDEDIFVTPISNLVANI--RFNASQILSPSPEVRGSISTPE 332
D + P +L S+ +T TD D+ + + ++ ++ R +S+ +V E
Sbjct: 411 DSKSSPSVLIHSLGKST--TDNDVRIQQLQEILQDLQKRLESSEAERKQLQVELQSRRAE 468
Query: 333 DSGFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVGDTIRKTRHLG--RSRRLSTLREQ 390
N+ + ++ LS + +E K++ K +++K LG +
Sbjct: 469 LVCLNNTEISENSSDLSQK---LKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHF 525
Query: 391 SSQSETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLKNLSKTPALQLVHELF 450
TEEE ++ D + +A+ E + + ++ +L L K ++ E +
Sbjct: 526 HELRVTEEEINVLKQDLQ------NALEESERNKEKVRELEEKLVEREKGTVIKPPVEEY 579
Query: 451 --MKSKRKRLQENSGHE--FL---EQGDGEKIAVLQCILAGLIGKKMGIEKLDILTELKY 503
MKS + EN E FL Q E+I L+ L + ++ E D
Sbjct: 580 EEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAED------- 632
Query: 504 RNLKHILAMVLESLTAESLCSVWKVSRNWREIVVQDKNANRRRKF------YITQLKTDS 557
+K + +++ L + V ++S+ ++E + ++ +R+ YI + + +
Sbjct: 633 --MKEAMNRMIDELNKQ----VSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEK 686
Query: 558 EGAVLNV-----EDAATRLQLLNRSALRSVQAQARIPGSQREQGSTLSPWGEVLTPLASS 612
+ NV EDA + ++ L + ++ +Q+E +++ +V+T L ++
Sbjct: 687 LMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTA 746
Query: 613 SVT----------HLSSKQEEYVKVAKTLFTDEA 636
+ HL+SK+ E K+ K L ++A
Sbjct: 747 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKA 780
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 34.3 bits (77), Expect = 0.41
Identities = 75/394 (19%), Positives = 161/394 (40%), Gaps = 56/394 (14%)
Query: 275 DENACPELLGSSVSGTTCGTDEDIFVTPISNLVANI--RFNASQILSPSPEVRGSISTPE 332
D + P +L S+ +T TD D+ + + ++ ++ R +S+ +V E
Sbjct: 400 DSKSSPSVLIHSLGKST--TDNDVRIQQLQEILQDLQKRLESSEAERKQLQVELQSRRAE 457
Query: 333 DSGFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVGDTIRKTRHLG--RSRRLSTLREQ 390
N+ + ++ LS + +E K++ K +++K LG +
Sbjct: 458 LVCLNNTEISENSSDLSQK---LKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHF 514
Query: 391 SSQSETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLKNLSKTPALQLVHELF 450
TEEE ++ D + +A+ E + + ++ +L L K ++ E +
Sbjct: 515 HELRVTEEEINVLKQDLQ------NALEESERNKEKVRELEEKLVEREKGTVIKPPVEEY 568
Query: 451 --MKSKRKRLQENSGHE--FL---EQGDGEKIAVLQCILAGLIGKKMGIEKLDILTELKY 503
MKS + EN E FL Q E+I L+ L + ++ E D
Sbjct: 569 EEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAED------- 621
Query: 504 RNLKHILAMVLESLTAESLCSVWKVSRNWREIVVQDKNANRRRKF------YITQLKTDS 557
+K + +++ L + V ++S+ ++E + ++ +R+ YI + + +
Sbjct: 622 --MKEAMNRMIDELNKQ----VSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEK 675
Query: 558 EGAVLNV-----EDAATRLQLLNRSALRSVQAQARIPGSQREQGSTLSPWGEVLTPLASS 612
+ NV EDA + ++ L + ++ +Q+E +++ +V+T L ++
Sbjct: 676 LMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTA 735
Query: 613 SVT----------HLSSKQEEYVKVAKTLFTDEA 636
+ HL+SK+ E K+ K L ++A
Sbjct: 736 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKA 769
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 34.3 bits (77), Expect = 0.41
Identities = 75/394 (19%), Positives = 161/394 (40%), Gaps = 56/394 (14%)
Query: 275 DENACPELLGSSVSGTTCGTDEDIFVTPISNLVANI--RFNASQILSPSPEVRGSISTPE 332
D + P +L S+ +T TD D+ + + ++ ++ R +S+ +V E
Sbjct: 379 DSKSSPSVLIHSLGKST--TDNDVRIQQLQEILQDLQKRLESSEAERKQLQVELQSRRAE 436
Query: 333 DSGFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVGDTIRKTRHLG--RSRRLSTLREQ 390
N+ + ++ LS + +E K++ K +++K LG +
Sbjct: 437 LVCLNNTEISENSSDLSQK---LKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHF 493
Query: 391 SSQSETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLKNLSKTPALQLVHELF 450
TEEE ++ D + +A+ E + + ++ +L L K ++ E +
Sbjct: 494 HELRVTEEEINVLKQDLQ------NALEESERNKEKVRELEEKLVEREKGTVIKPPVEEY 547
Query: 451 --MKSKRKRLQENSGHE--FL---EQGDGEKIAVLQCILAGLIGKKMGIEKLDILTELKY 503
MKS + EN E FL Q E+I L+ L + ++ E D
Sbjct: 548 EEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAED------- 600
Query: 504 RNLKHILAMVLESLTAESLCSVWKVSRNWREIVVQDKNANRRRKF------YITQLKTDS 557
+K + +++ L + V ++S+ ++E + ++ +R+ YI + + +
Sbjct: 601 --MKEAMNRMIDELNKQ----VSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEK 654
Query: 558 EGAVLNV-----EDAATRLQLLNRSALRSVQAQARIPGSQREQGSTLSPWGEVLTPLASS 612
+ NV EDA + ++ L + ++ +Q+E +++ +V+T L ++
Sbjct: 655 LMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTA 714
Query: 613 SVT----------HLSSKQEEYVKVAKTLFTDEA 636
+ HL+SK+ E K+ K L ++A
Sbjct: 715 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKA 748
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 34.3 bits (77), Expect = 0.41
Identities = 75/394 (19%), Positives = 161/394 (40%), Gaps = 56/394 (14%)
Query: 275 DENACPELLGSSVSGTTCGTDEDIFVTPISNLVANI--RFNASQILSPSPEVRGSISTPE 332
D + P +L S+ +T TD D+ + + ++ ++ R +S+ +V E
Sbjct: 408 DSKSSPSVLIHSLGKST--TDNDVRIQQLQEILQDLQKRLESSEAERKQLQVELQSRRAE 465
Query: 333 DSGFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVGDTIRKTRHLG--RSRRLSTLREQ 390
N+ + ++ LS + +E K++ K +++K LG +
Sbjct: 466 LVCLNNTEISENSSDLSQK---LKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHF 522
Query: 391 SSQSETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLKNLSKTPALQLVHELF 450
TEEE ++ D + +A+ E + + ++ +L L K ++ E +
Sbjct: 523 HELRVTEEEINVLKQDLQ------NALEESERNKEKVRELEEKLVEREKGTVIKPPVEEY 576
Query: 451 --MKSKRKRLQENSGHE--FL---EQGDGEKIAVLQCILAGLIGKKMGIEKLDILTELKY 503
MKS + EN E FL Q E+I L+ L + ++ E D
Sbjct: 577 EEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAED------- 629
Query: 504 RNLKHILAMVLESLTAESLCSVWKVSRNWREIVVQDKNANRRRKF------YITQLKTDS 557
+K + +++ L + V ++S+ ++E + ++ +R+ YI + + +
Sbjct: 630 --MKEAMNRMIDELNKQ----VSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEK 683
Query: 558 EGAVLNV-----EDAATRLQLLNRSALRSVQAQARIPGSQREQGSTLSPWGEVLTPLASS 612
+ NV EDA + ++ L + ++ +Q+E +++ +V+T L ++
Sbjct: 684 LMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTA 743
Query: 613 SVT----------HLSSKQEEYVKVAKTLFTDEA 636
+ HL+SK+ E K+ K L ++A
Sbjct: 744 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKA 777
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 34.3 bits (77), Expect = 0.41
Identities = 75/394 (19%), Positives = 161/394 (40%), Gaps = 56/394 (14%)
Query: 275 DENACPELLGSSVSGTTCGTDEDIFVTPISNLVANI--RFNASQILSPSPEVRGSISTPE 332
D + P +L S+ +T TD D+ + + ++ ++ R +S+ +V E
Sbjct: 408 DSKSSPSVLIHSLGKST--TDNDVRIQQLQEILQDLQKRLESSEAERKQLQVELQSRRAE 465
Query: 333 DSGFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVGDTIRKTRHLG--RSRRLSTLREQ 390
N+ + ++ LS + +E K++ K +++K LG +
Sbjct: 466 LVCLNNTEISENSSDLSQK---LKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHF 522
Query: 391 SSQSETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLKNLSKTPALQLVHELF 450
TEEE ++ D + +A+ E + + ++ +L L K ++ E +
Sbjct: 523 HELRVTEEEINVLKQDLQ------NALEESERNKEKVRELEEKLVEREKGTVIKPPVEEY 576
Query: 451 --MKSKRKRLQENSGHE--FL---EQGDGEKIAVLQCILAGLIGKKMGIEKLDILTELKY 503
MKS + EN E FL Q E+I L+ L + ++ E D
Sbjct: 577 EEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAED------- 629
Query: 504 RNLKHILAMVLESLTAESLCSVWKVSRNWREIVVQDKNANRRRKF------YITQLKTDS 557
+K + +++ L + V ++S+ ++E + ++ +R+ YI + + +
Sbjct: 630 --MKEAMNRMIDELNKQ----VSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEK 683
Query: 558 EGAVLNV-----EDAATRLQLLNRSALRSVQAQARIPGSQREQGSTLSPWGEVLTPLASS 612
+ NV EDA + ++ L + ++ +Q+E +++ +V+T L ++
Sbjct: 684 LMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTA 743
Query: 613 SVT----------HLSSKQEEYVKVAKTLFTDEA 636
+ HL+SK+ E K+ K L ++A
Sbjct: 744 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKA 777
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 34.3 bits (77), Expect = 0.41
Identities = 75/394 (19%), Positives = 161/394 (40%), Gaps = 56/394 (14%)
Query: 275 DENACPELLGSSVSGTTCGTDEDIFVTPISNLVANI--RFNASQILSPSPEVRGSISTPE 332
D + P +L S+ +T TD D+ + + ++ ++ R +S+ +V E
Sbjct: 408 DSKSSPSVLIHSLGKST--TDNDVRIQQLQEILQDLQKRLESSEAERKQLQVELQSRRAE 465
Query: 333 DSGFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVGDTIRKTRHLG--RSRRLSTLREQ 390
N+ + ++ LS + +E K++ K +++K LG +
Sbjct: 466 LVCLNNTEISENSSDLSQK---LKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHF 522
Query: 391 SSQSETEEEKQIVHPDSEKRAAAASAISEGQLSSDESGDLTFSLKNLSKTPALQLVHELF 450
TEEE ++ D + +A+ E + + ++ +L L K ++ E +
Sbjct: 523 HELRVTEEEINVLKQDLQ------NALEESERNKEKVRELEEKLVEREKGTVIKPPVEEY 576
Query: 451 --MKSKRKRLQENSGHE--FL---EQGDGEKIAVLQCILAGLIGKKMGIEKLDILTELKY 503
MKS + EN E FL Q E+I L+ L + ++ E D
Sbjct: 577 EEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAED------- 629
Query: 504 RNLKHILAMVLESLTAESLCSVWKVSRNWREIVVQDKNANRRRKF------YITQLKTDS 557
+K + +++ L + V ++S+ ++E + ++ +R+ YI + + +
Sbjct: 630 --MKEAMNRMIDELNKQ----VSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEK 683
Query: 558 EGAVLNV-----EDAATRLQLLNRSALRSVQAQARIPGSQREQGSTLSPWGEVLTPLASS 612
+ NV EDA + ++ L + ++ +Q+E +++ +V+T L ++
Sbjct: 684 LMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTA 743
Query: 613 SVT----------HLSSKQEEYVKVAKTLFTDEA 636
+ HL+SK+ E K+ K L ++A
Sbjct: 744 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKA 777
>gi|35493801 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 34.3 bits (77), Expect = 0.41
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Query: 637 LKPCPRCQSPAKYQPYKKRGLCSR---TACGFDFCVLCL-----CAYHGSEECSRGAAKP 688
+KPCPRC A Y G C+ CG +FC LC+ Y C+ KP
Sbjct: 298 IKPCPRC---AAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKP 354
Query: 689 RNRK 692
+RK
Sbjct: 355 WSRK 358
>gi|35493782 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 34.3 bits (77), Expect = 0.41
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Query: 637 LKPCPRCQSPAKYQPYKKRGLCSR---TACGFDFCVLCL-----CAYHGSEECSRGAAKP 688
+KPCPRC A Y G C+ CG +FC LC+ Y C+ KP
Sbjct: 298 IKPCPRC---AAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKP 354
Query: 689 RNRK 692
+RK
Sbjct: 355 WSRK 358
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,187,442
Number of Sequences: 37866
Number of extensions: 1270417
Number of successful extensions: 3923
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 3850
Number of HSP's gapped (non-prelim): 132
length of query: 708
length of database: 18,247,518
effective HSP length: 109
effective length of query: 599
effective length of database: 14,120,124
effective search space: 8457954276
effective search space used: 8457954276
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.