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Search of human proteins with 10835147
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo
sapiens]
(159 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo sa... 328 2e-90
gi|27894319 interleukin 1 receptor antagonist isoform 1 precurso... 323 5e-89
gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo sa... 323 5e-89
gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo sa... 296 4e-81
gi|27894310 interleukin 1 family, member 5 [Homo sapiens] 123 6e-29
gi|6912432 interleukin 1 family, member 5 [Homo sapiens] 123 6e-29
gi|27894307 interleukin 1 family, member 10 [Homo sapiens] 97 8e-21
gi|27894304 interleukin 1 family, member 10 [Homo sapiens] 97 8e-21
gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens] 71 4e-13
gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens] 68 4e-12
gi|9665234 interleukin 1 family, member 9 [Homo sapiens] 65 3e-11
gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens] 58 4e-09
gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein ... 58 4e-09
gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens] 58 4e-09
gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens] 57 7e-09
gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens] 57 7e-09
gi|10835145 interleukin 1, beta proprotein [Homo sapiens] 53 1e-07
gi|194239668 SHC (Src homology 2 domain containing) transforming... 28 2.5
gi|194239664 SHC (Src homology 2 domain containing) transforming... 28 2.5
gi|194239662 SHC (Src homology 2 domain containing) transforming... 28 2.5
gi|32261324 SHC (Src homology 2 domain containing) transforming ... 28 2.5
gi|239751592 PREDICTED: hypothetical protein XP_002347924 [Homo ... 28 3.3
gi|169790811 SHC (Src homology 2 domain containing) transforming... 28 3.3
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa... 27 7.4
>gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo
sapiens]
Length = 159
Score = 328 bits (840), Expect = 2e-90
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MALETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEP 60
MALETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEP
Sbjct: 1 MALETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEP 60
Query: 61 HALFLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFES 120
HALFLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFES
Sbjct: 61 HALFLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFES 120
Query: 121 AACPGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE 159
AACPGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE
Sbjct: 121 AACPGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE 159
>gi|27894319 interleukin 1 receptor antagonist isoform 1 precursor
[Homo sapiens]
Length = 177
Score = 323 bits (827), Expect = 5e-89
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 4 ETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHAL 63
ETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHAL
Sbjct: 22 ETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHAL 81
Query: 64 FLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAAC 123
FLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAAC
Sbjct: 82 FLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAAC 141
Query: 124 PGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE 159
PGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE
Sbjct: 142 PGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE 177
>gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo
sapiens]
Length = 180
Score = 323 bits (827), Expect = 5e-89
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 4 ETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHAL 63
ETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHAL
Sbjct: 25 ETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHAL 84
Query: 64 FLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAAC 123
FLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAAC
Sbjct: 85 FLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAAC 144
Query: 124 PGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE 159
PGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE
Sbjct: 145 PGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE 180
>gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo
sapiens]
Length = 143
Score = 296 bits (759), Expect = 4e-81
Identities = 143/143 (100%), Positives = 143/143 (100%)
Query: 17 MQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHALFLGIHGGKMCLSC 76
MQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHALFLGIHGGKMCLSC
Sbjct: 1 MQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHALFLGIHGGKMCLSC 60
Query: 77 VKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQ 136
VKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQ
Sbjct: 61 VKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQ 120
Query: 137 PVSLTNMPDEGVMVTKFYFQEDE 159
PVSLTNMPDEGVMVTKFYFQEDE
Sbjct: 121 PVSLTNMPDEGVMVTKFYFQEDE 143
>gi|27894310 interleukin 1 family, member 5 [Homo sapiens]
Length = 155
Score = 123 bits (309), Expect = 6e-29
Identities = 73/148 (49%), Positives = 86/148 (58%), Gaps = 13/148 (8%)
Query: 20 FRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVP-------IEPHALFLGIHGGKM 72
FR+ D K YL NNQL+AG L V E+I VVP + P + LG+ GG
Sbjct: 9 FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSP--VILGVQGGSQ 66
Query: 73 CLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAM 132
CLSC G E L LE VNI +L K+ K F F R D G T+SFESAA PGWFLCT
Sbjct: 67 CLSC-GVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVP 125
Query: 133 EADQPVSLTNMPDEG---VMVTKFYFQE 157
EADQPV LT +P+ G +T FYFQ+
Sbjct: 126 EADQPVRLTQLPENGGWNAPITDFYFQQ 153
>gi|6912432 interleukin 1 family, member 5 [Homo sapiens]
Length = 155
Score = 123 bits (309), Expect = 6e-29
Identities = 73/148 (49%), Positives = 86/148 (58%), Gaps = 13/148 (8%)
Query: 20 FRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVP-------IEPHALFLGIHGGKM 72
FR+ D K YL NNQL+AG L V E+I VVP + P + LG+ GG
Sbjct: 9 FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSP--VILGVQGGSQ 66
Query: 73 CLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAM 132
CLSC G E L LE VNI +L K+ K F F R D G T+SFESAA PGWFLCT
Sbjct: 67 CLSC-GVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVP 125
Query: 133 EADQPVSLTNMPDEG---VMVTKFYFQE 157
EADQPV LT +P+ G +T FYFQ+
Sbjct: 126 EADQPVRLTQLPENGGWNAPITDFYFQQ 153
>gi|27894307 interleukin 1 family, member 10 [Homo sapiens]
Length = 152
Score = 96.7 bits (239), Expect = 8e-21
Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 26 NQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHA-----LFLGIHGGKMCLSCVKSG 80
+QK Y R+ QL+ G N EKI ++P A +FLGI GG CL+CV++
Sbjct: 16 DQKALYTRDGQLLVGDPVADNC-CAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
Query: 81 DETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQPVSL 140
+ LQLE VNI +L + ++ RF F +S SG E+AA PGWFLC E QPV L
Sbjct: 75 EGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQL 134
Query: 141 TNMPDEGVMVTKFYFQE 157
T + TKFYF++
Sbjct: 135 TKESEPSAR-TKFYFEQ 150
>gi|27894304 interleukin 1 family, member 10 [Homo sapiens]
Length = 152
Score = 96.7 bits (239), Expect = 8e-21
Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 26 NQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHA-----LFLGIHGGKMCLSCVKSG 80
+QK Y R+ QL+ G N EKI ++P A +FLGI GG CL+CV++
Sbjct: 16 DQKALYTRDGQLLVGDPVADNC-CAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
Query: 81 DETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQPVSL 140
+ LQLE VNI +L + ++ RF F +S SG E+AA PGWFLC E QPV L
Sbjct: 75 EGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQL 134
Query: 141 TNMPDEGVMVTKFYFQE 157
T + TKFYF++
Sbjct: 135 TKESEPSAR-TKFYFEQ 150
>gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]
Length = 158
Score = 70.9 bits (172), Expect = 4e-13
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Query: 22 IWDVNQKTFYLRNNQLVA----GYLQGPNVNLEEKIDVVPIEP---HALFLGIHGGKMCL 74
I D+N + + L++ L+A + + L V +E + ++LG++G +CL
Sbjct: 15 IQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNGLNLCL 74
Query: 75 SCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEA 134
C K GD+ LQL+ +I DL + K F F S SG ++FES A PGWF+ + E
Sbjct: 75 MCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESVAFPGWFIAVSSEG 134
Query: 135 DQPVSLT 141
P+ LT
Sbjct: 135 GCPLILT 141
>gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]
Length = 157
Score = 67.8 bits (164), Expect = 4e-12
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 28/165 (16%)
Query: 12 RKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHAL-------- 63
++ + +++ I D Q + L N L+A L + P+ H +
Sbjct: 4 QREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSR---------SIKPVTLHLIACRDTEFS 54
Query: 64 --------FLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPT 115
+LGI G +CL C + + LQL+ NI DL +K K F F + G T
Sbjct: 55 DKEKGNMVYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGST 114
Query: 116 TSFESAACPGWFLCTAMEADQPVSLTNMPDEGVM-VTKFYFQEDE 159
+ F+S + PGWF+ T+ + QP+ LT + G+ T FY E
Sbjct: 115 SVFQSVSYPGWFIATSTTSGQPIFLTK--ERGITNNTNFYLDSVE 157
>gi|9665234 interleukin 1 family, member 9 [Homo sapiens]
Length = 169
Score = 64.7 bits (156), Expect = 3e-11
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 16/130 (12%)
Query: 24 DVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIE---PHAL--------FLGIHGGKM 72
D+NQ+ + L+ LVA P + + V I P AL +LGI +M
Sbjct: 29 DLNQQVWTLQGQNLVAV----PRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEM 84
Query: 73 CLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAM 132
CL C K G++ LQL+ I DL + K F F R+ +G T++ ES A P WF+ ++
Sbjct: 85 CLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIASS- 143
Query: 133 EADQPVSLTN 142
+ DQP+ LT+
Sbjct: 144 KRDQPIILTS 153
>gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]
Length = 197
Score = 57.8 bits (138), Expect = 4e-09
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 13 KSSKMQAFRIWDVNQKTFYLRNNQLVA----GYLQGPNV--NLEEKIDVVPIEPHA-LFL 65
K+ + F I D + K L + L+A Y++ P + L + E + + L
Sbjct: 32 KNLNPKKFSIHDQDHKVLVLDSGNLIAVPDKNYIR-PEIFFALASSLSSASAEKGSPILL 90
Query: 66 GIHGGKMCLSCVKSGDETR--LQLEAVNITDLSENRKQDKR-FAFIRSDSGPTTSFESAA 122
G+ G+ CL C K ++ LQL+ + L+ ++ +R F F R+ G ESAA
Sbjct: 91 GVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAA 150
Query: 123 CPGWFLCTAMEADQPVSLTN 142
PGWF+CT+ ++PV +T+
Sbjct: 151 HPGWFICTSCNCNEPVGVTD 170
>gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein
[Homo sapiens]
Length = 218
Score = 57.8 bits (138), Expect = 4e-09
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 13 KSSKMQAFRIWDVNQKTFYLRNNQLVA----GYLQGPNV--NLEEKIDVVPIEPHA-LFL 65
K+ + F I D + K L + L+A Y++ P + L + E + + L
Sbjct: 53 KNLNPKKFSIHDQDHKVLVLDSGNLIAVPDKNYIR-PEIFFALASSLSSASAEKGSPILL 111
Query: 66 GIHGGKMCLSCVKSGDETR--LQLEAVNITDLSENRKQDKR-FAFIRSDSGPTTSFESAA 122
G+ G+ CL C K ++ LQL+ + L+ ++ +R F F R+ G ESAA
Sbjct: 112 GVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAA 171
Query: 123 CPGWFLCTAMEADQPVSLTN 142
PGWF+CT+ ++PV +T+
Sbjct: 172 HPGWFICTSCNCNEPVGVTD 191
>gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]
Length = 192
Score = 57.8 bits (138), Expect = 4e-09
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 13 KSSKMQAFRIWDVNQKTFYLRNNQLVA----GYLQGPNV--NLEEKIDVVPIEPHA-LFL 65
K+ + F I D + K L + L+A Y++ P + L + E + + L
Sbjct: 27 KNLNPKKFSIHDQDHKVLVLDSGNLIAVPDKNYIR-PEIFFALASSLSSASAEKGSPILL 85
Query: 66 GIHGGKMCLSCVKSGDETR--LQLEAVNITDLSENRKQDKR-FAFIRSDSGPTTSFESAA 122
G+ G+ CL C K ++ LQL+ + L+ ++ +R F F R+ G ESAA
Sbjct: 86 GVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAA 145
Query: 123 CPGWFLCTAMEADQPVSLTN 142
PGWF+CT+ ++PV +T+
Sbjct: 146 HPGWFICTSCNCNEPVGVTD 165
>gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]
Length = 178
Score = 57.0 bits (136), Expect = 7e-09
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 63 LFLGIHGGKMCLSCVKSGDETR--LQLEAVNITDLSENRKQDKR-FAFIRSDSGPTTSFE 119
+ LG+ G+ CL C K ++ LQL+ + L+ ++ +R F F R+ G E
Sbjct: 69 ILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLE 128
Query: 120 SAACPGWFLCTAMEADQPVSLTN 142
SAA PGWF+CT+ ++PV +T+
Sbjct: 129 SAAHPGWFICTSCNCNEPVGVTD 151
>gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]
Length = 157
Score = 57.0 bits (136), Expect = 7e-09
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 63 LFLGIHGGKMCLSCVKSGDETR--LQLEAVNITDLSENRKQDKR-FAFIRSDSGPTTSFE 119
+ LG+ G+ CL C K ++ LQL+ + L+ ++ +R F F R+ G E
Sbjct: 48 ILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLE 107
Query: 120 SAACPGWFLCTAMEADQPVSLTN 142
SAA PGWF+CT+ ++PV +T+
Sbjct: 108 SAAHPGWFICTSCNCNEPVGVTD 130
>gi|10835145 interleukin 1, beta proprotein [Homo sapiens]
Length = 269
Score = 52.8 bits (125), Expect = 1e-07
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 50 EEKIDVVPIEPHALFLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIR 109
EE D +P+ LG+ + LSCV D+ LQLE+V+ + + +K +KRF F +
Sbjct: 166 EESNDKIPVA-----LGLKEKNLYLSCVLKDDKPTLQLESVDPKNYPK-KKMEKRFVFNK 219
Query: 110 SDSGPTTSFESAACPGWFLCTAMEADQPVSL 140
+ FESA P W++ T+ + PV L
Sbjct: 220 IEINNKLEFESAQFPNWYISTSQAENMPVFL 250
>gi|194239668 SHC (Src homology 2 domain containing) transforming
protein 1 isoform 4 [Homo sapiens]
Length = 473
Score = 28.5 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 119 ESAACPGWFLCTAMEADQPVSLTNMPDEGVMVTK 152
ES PG ++ T +++ QP L + EGV+ TK
Sbjct: 402 ESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTK 435
>gi|194239664 SHC (Src homology 2 domain containing) transforming
protein 1 isoform 3 [Homo sapiens]
Length = 584
Score = 28.5 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 119 ESAACPGWFLCTAMEADQPVSLTNMPDEGVMVTK 152
ES PG ++ T +++ QP L + EGV+ TK
Sbjct: 513 ESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTK 546
>gi|194239662 SHC (Src homology 2 domain containing) transforming
protein 1 isoform 1 [Homo sapiens]
Length = 583
Score = 28.5 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 119 ESAACPGWFLCTAMEADQPVSLTNMPDEGVMVTK 152
ES PG ++ T +++ QP L + EGV+ TK
Sbjct: 512 ESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTK 545
>gi|32261324 SHC (Src homology 2 domain containing) transforming
protein 1 isoform 2 [Homo sapiens]
Length = 474
Score = 28.5 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 119 ESAACPGWFLCTAMEADQPVSLTNMPDEGVMVTK 152
ES PG ++ T +++ QP L + EGV+ TK
Sbjct: 403 ESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTK 436
>gi|239751592 PREDICTED: hypothetical protein XP_002347924 [Homo
sapiens]
Length = 475
Score = 28.1 bits (61), Expect = 3.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 119 ESAACPGWFLCTAMEADQPVSLTNMPDEGVMVTK 152
+S PG ++ T M A QP L + EGV+ TK
Sbjct: 404 DSVTNPGQYVLTGMHAGQPKHLLLVDPEGVVRTK 437
>gi|169790811 SHC (Src homology 2 domain containing) transforming
protein 2 [Homo sapiens]
Length = 582
Score = 28.1 bits (61), Expect = 3.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 119 ESAACPGWFLCTAMEADQPVSLTNMPDEGVMVTK 152
+S PG ++ T M A QP L + EGV+ TK
Sbjct: 511 DSVTNPGQYVLTGMHAGQPKHLLLVDPEGVVRTK 544
>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
sapiens]
Length = 631
Score = 26.9 bits (58), Expect = 7.4
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 50 EEKIDVVPIEPHALF--LGIHGGKMCLSCVKSGDET 83
+EK ++P++ H L GK C+ CVK+ + T
Sbjct: 254 KEKRGIIPLDAHCCVEVLPDRDGKRCMFCVKTANRT 289
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,131,959
Number of Sequences: 37866
Number of extensions: 240790
Number of successful extensions: 502
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 469
Number of HSP's gapped (non-prelim): 24
length of query: 159
length of database: 18,247,518
effective HSP length: 94
effective length of query: 65
effective length of database: 14,688,114
effective search space: 954727410
effective search space used: 954727410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.