Guide to the Human Genome
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Search of human proteins with 239749421

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749421 PREDICTED: hypothetical protein XP_002347040 [Homo
sapiens]
         (212 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754884 PREDICTED: hypothetical protein XP_002346151 [Homo ...   463   e-131
gi|239749421 PREDICTED: hypothetical protein XP_002347040 [Homo ...   463   e-131
gi|239743557 PREDICTED: hypothetical protein XP_002342892 [Homo ...   463   e-131
gi|239756030 PREDICTED: hypothetical protein [Homo sapiens]            33   0.23 
gi|239750584 PREDICTED: hypothetical protein [Homo sapiens]            33   0.23 
gi|239744881 PREDICTED: hypothetical protein XP_002344129 [Homo ...    33   0.23 
gi|146134388 YLP motif containing 1 [Homo sapiens]                     31   0.68 
gi|187761351 growth factor independent 1 [Homo sapiens]                31   0.89 
gi|187761349 growth factor independent 1 [Homo sapiens]                31   0.89 
gi|71037377 growth factor independent 1 [Homo sapiens]                 31   0.89 
gi|12707562 period 2 [Homo sapiens]                                    30   2.0  
gi|188497667 trafficking protein, kinesin binding 2 [Homo sapiens]     29   3.4  
gi|22748655 hypothetical protein LOC93190 [Homo sapiens]               28   4.4  
gi|28912912 NK6 transcription factor related, locus 2 [Homo sapi...    28   5.7  
gi|4502365 NK3 homeobox 2 [Homo sapiens]                               28   5.7  
gi|33598931 scavenger receptor class F, member 1 isoform 3 precu...    28   7.5  
gi|239752133 PREDICTED: hypothetical protein [Homo sapiens]            28   7.5  
gi|145309324 FH2 domain containing 1 [Homo sapiens]                    28   7.5  
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    28   7.5  
gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo s...    28   7.5  
gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo s...    28   7.5  
gi|6005757 chromatin-specific transcription elongation factor la...    27   9.8  
gi|19923559 EMSY protein [Homo sapiens]                                27   9.8  
gi|10190742 ubiquitin specific peptidase 29 [Homo sapiens]             27   9.8  
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    27   9.8  
gi|149588928 SLAIN motif family, member 2 [Homo sapiens]               27   9.8  

>gi|239754884 PREDICTED: hypothetical protein XP_002346151 [Homo
           sapiens]
          Length = 212

 Score =  463 bits (1192), Expect = e-131
 Identities = 212/212 (100%), Positives = 212/212 (100%)

Query: 1   MTPAKDVDGKTKSKQITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV 60
           MTPAKDVDGKTKSKQITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV
Sbjct: 1   MTPAKDVDGKTKSKQITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV 60

Query: 61  CQEITLSLDFVDHFLISNPDKSLLVKLVFPSTSPYPPSHCPIPGWPVHREHCLCGHWGRQ 120
           CQEITLSLDFVDHFLISNPDKSLLVKLVFPSTSPYPPSHCPIPGWPVHREHCLCGHWGRQ
Sbjct: 61  CQEITLSLDFVDHFLISNPDKSLLVKLVFPSTSPYPPSHCPIPGWPVHREHCLCGHWGRQ 120

Query: 121 LHPRDDGVQGMTRKLFVWPGDVPGAGWRPPSLTSLPPSFLCCCFLLPSSKLPWCWSSQRR 180
           LHPRDDGVQGMTRKLFVWPGDVPGAGWRPPSLTSLPPSFLCCCFLLPSSKLPWCWSSQRR
Sbjct: 121 LHPRDDGVQGMTRKLFVWPGDVPGAGWRPPSLTSLPPSFLCCCFLLPSSKLPWCWSSQRR 180

Query: 181 SVTRPATATYSEPHSAHRGCGLLFPNHRPECL 212
           SVTRPATATYSEPHSAHRGCGLLFPNHRPECL
Sbjct: 181 SVTRPATATYSEPHSAHRGCGLLFPNHRPECL 212


>gi|239749421 PREDICTED: hypothetical protein XP_002347040 [Homo
           sapiens]
          Length = 212

 Score =  463 bits (1192), Expect = e-131
 Identities = 212/212 (100%), Positives = 212/212 (100%)

Query: 1   MTPAKDVDGKTKSKQITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV 60
           MTPAKDVDGKTKSKQITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV
Sbjct: 1   MTPAKDVDGKTKSKQITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV 60

Query: 61  CQEITLSLDFVDHFLISNPDKSLLVKLVFPSTSPYPPSHCPIPGWPVHREHCLCGHWGRQ 120
           CQEITLSLDFVDHFLISNPDKSLLVKLVFPSTSPYPPSHCPIPGWPVHREHCLCGHWGRQ
Sbjct: 61  CQEITLSLDFVDHFLISNPDKSLLVKLVFPSTSPYPPSHCPIPGWPVHREHCLCGHWGRQ 120

Query: 121 LHPRDDGVQGMTRKLFVWPGDVPGAGWRPPSLTSLPPSFLCCCFLLPSSKLPWCWSSQRR 180
           LHPRDDGVQGMTRKLFVWPGDVPGAGWRPPSLTSLPPSFLCCCFLLPSSKLPWCWSSQRR
Sbjct: 121 LHPRDDGVQGMTRKLFVWPGDVPGAGWRPPSLTSLPPSFLCCCFLLPSSKLPWCWSSQRR 180

Query: 181 SVTRPATATYSEPHSAHRGCGLLFPNHRPECL 212
           SVTRPATATYSEPHSAHRGCGLLFPNHRPECL
Sbjct: 181 SVTRPATATYSEPHSAHRGCGLLFPNHRPECL 212


>gi|239743557 PREDICTED: hypothetical protein XP_002342892 [Homo
           sapiens]
          Length = 212

 Score =  463 bits (1192), Expect = e-131
 Identities = 212/212 (100%), Positives = 212/212 (100%)

Query: 1   MTPAKDVDGKTKSKQITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV 60
           MTPAKDVDGKTKSKQITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV
Sbjct: 1   MTPAKDVDGKTKSKQITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV 60

Query: 61  CQEITLSLDFVDHFLISNPDKSLLVKLVFPSTSPYPPSHCPIPGWPVHREHCLCGHWGRQ 120
           CQEITLSLDFVDHFLISNPDKSLLVKLVFPSTSPYPPSHCPIPGWPVHREHCLCGHWGRQ
Sbjct: 61  CQEITLSLDFVDHFLISNPDKSLLVKLVFPSTSPYPPSHCPIPGWPVHREHCLCGHWGRQ 120

Query: 121 LHPRDDGVQGMTRKLFVWPGDVPGAGWRPPSLTSLPPSFLCCCFLLPSSKLPWCWSSQRR 180
           LHPRDDGVQGMTRKLFVWPGDVPGAGWRPPSLTSLPPSFLCCCFLLPSSKLPWCWSSQRR
Sbjct: 121 LHPRDDGVQGMTRKLFVWPGDVPGAGWRPPSLTSLPPSFLCCCFLLPSSKLPWCWSSQRR 180

Query: 181 SVTRPATATYSEPHSAHRGCGLLFPNHRPECL 212
           SVTRPATATYSEPHSAHRGCGLLFPNHRPECL
Sbjct: 181 SVTRPATATYSEPHSAHRGCGLLFPNHRPECL 212


>gi|239756030 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 156 PPSFLCCCFLLPSSKLPWCWSSQRRSVTRPATATYSEP--HSAHRGCG 201
           PPS+ C C LL   KLP CW        RP    +  P   +A  G G
Sbjct: 47  PPSWECGCVLLLWIKLPGCWPHWTGVAVRPCLGAWLPPEVRAAQGGVG 94


>gi|239750584 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 156 PPSFLCCCFLLPSSKLPWCWSSQRRSVTRPATATYSEP--HSAHRGCG 201
           PPS+ C C LL   KLP CW        RP    +  P   +A  G G
Sbjct: 47  PPSWECGCVLLLWIKLPGCWPHWTGVAVRPCLGAWLPPEVRAAQGGVG 94


>gi|239744881 PREDICTED: hypothetical protein XP_002344129 [Homo
           sapiens]
          Length = 159

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 156 PPSFLCCCFLLPSSKLPWCWSSQRRSVTRPATATYSEP--HSAHRGCG 201
           PPS+ C C LL   KLP CW        RP    +  P   +A  G G
Sbjct: 47  PPSWECGCVLLLWIKLPGCWPHWTGVAVRPCLGAWLPPEVRAAQGGVG 94


>gi|146134388 YLP motif containing 1 [Homo sapiens]
          Length = 2146

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 3/101 (2%)

Query: 96  PPSHCPIPGWPVHREHCLCGHWGRQLHPRDDGVQGMTRKLFVWPGD---VPGAGWRPPSL 152
           PP   P P  P         +  + LH + DG  G+       P +   VP   + PPS 
Sbjct: 103 PPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQ 162

Query: 153 TSLPPSFLCCCFLLPSSKLPWCWSSQRRSVTRPATATYSEP 193
           + +PP      +  P+S  P+   +Q      P + +Y  P
Sbjct: 163 SYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAP 203


>gi|187761351 growth factor independent 1 [Homo sapiens]
          Length = 422

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 147 WRPPSLTSLPPSFLCCCFLL------PSSKLPWCWSSQRRSVTRPATATYSEPHSAHRGC 200
           WRPPS ++ P S    C  L      P    P+ WS    S  R    +Y    +  RG 
Sbjct: 90  WRPPSPSASPASEKSMCPSLDEAQPFPLPFKPYSWSGLAGSDLRHLVQSYRPCGALERGA 149

Query: 201 GL-LFPNHRPE 210
           GL LF    PE
Sbjct: 150 GLGLFCEPAPE 160


>gi|187761349 growth factor independent 1 [Homo sapiens]
          Length = 422

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 147 WRPPSLTSLPPSFLCCCFLL------PSSKLPWCWSSQRRSVTRPATATYSEPHSAHRGC 200
           WRPPS ++ P S    C  L      P    P+ WS    S  R    +Y    +  RG 
Sbjct: 90  WRPPSPSASPASEKSMCPSLDEAQPFPLPFKPYSWSGLAGSDLRHLVQSYRPCGALERGA 149

Query: 201 GL-LFPNHRPE 210
           GL LF    PE
Sbjct: 150 GLGLFCEPAPE 160


>gi|71037377 growth factor independent 1 [Homo sapiens]
          Length = 422

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 147 WRPPSLTSLPPSFLCCCFLL------PSSKLPWCWSSQRRSVTRPATATYSEPHSAHRGC 200
           WRPPS ++ P S    C  L      P    P+ WS    S  R    +Y    +  RG 
Sbjct: 90  WRPPSPSASPASEKSMCPSLDEAQPFPLPFKPYSWSGLAGSDLRHLVQSYRPCGALERGA 149

Query: 201 GL-LFPNHRPE 210
           GL LF    PE
Sbjct: 150 GLGLFCEPAPE 160


>gi|12707562 period 2 [Homo sapiens]
          Length = 1255

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 7/87 (8%)

Query: 9   GKTKSKQITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCVCQEITLSL 68
           G+ K K +TE        KK V  + +     L  S  + +   CKN   C  Q+I+  L
Sbjct: 534 GEQKKKSVTEMQTNPPAEKKAVPAMEK---DSLGVSFPEEL--ACKNQPTCSYQQIS-CL 587

Query: 69  DFVDHFLIS-NPDKSLLVKLVFPSTSP 94
           D V  +L S N   +L  K  FP+  P
Sbjct: 588 DSVIRYLESCNEAATLKRKCEFPANVP 614


>gi|188497667 trafficking protein, kinesin binding 2 [Homo sapiens]
          Length = 914

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 62  QEITLSLDFVDHFLISNPDKSLLVKLVFPSTSPYPPSHCPIP 103
           QE  +S       +  NP + L   L  PST P  PSH P P
Sbjct: 746 QERGISAKVYHSPISENPLQPLPKSLAIPSTPPNSPSHSPCP 787


>gi|22748655 hypothetical protein LOC93190 [Homo sapiens]
          Length = 194

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 175 WSSQRRSVTRPATATYSEPHSAHRGCGLLFPNHRPE 210
           W  +RR  TR    T   P S +R   + FP+HRP+
Sbjct: 31  WMEERRKFTRDTDKT---PQSIYRKEYIPFPDHRPD 63


>gi|28912912 NK6 transcription factor related, locus 2 [Homo
           sapiens]
          Length = 277

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)

Query: 138 WPGDVPGAGWRPPSLTSLPPS 158
           WPG V GA WR P L    P+
Sbjct: 118 WPGVVQGAPWRDPRLAGPAPA 138


>gi|4502365 NK3 homeobox 2 [Homo sapiens]
          Length = 333

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 142 VPGAGWRPPSLTSLPPSFLCCCFLLPSSKLPWC 174
           +PG   RPPSL  L PS+    + LP   L  C
Sbjct: 294 LPGEVLRPPSLLPLQPSYYYPYYCLPGWALSTC 326


>gi|33598931 scavenger receptor class F, member 1 isoform 3
           precursor [Homo sapiens]
          Length = 569

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 17/86 (19%)

Query: 112 CLCGHWGRQLHPRD----DGVQGMTRKLFVWPGDVPGAGWRPPSLTSLPPSFLCCCFLLP 167
           C C  W  +   +D    DG      KL VW            +LTSL  +  C    L 
Sbjct: 441 CACCCWAPRSDLKDRPARDGATVSRMKLQVWG-----------TLTSLGSTLPCRS--LS 487

Query: 168 SSKLPWCWSSQRRSVTRPATATYSEP 193
           S KLPW  +S  R +      T S P
Sbjct: 488 SHKLPWVTASSSRPLPAGPLMTPSHP 513


>gi|239752133 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 35/119 (29%), Positives = 43/119 (36%), Gaps = 13/119 (10%)

Query: 91  STSPYPPSHCPIPGWPVHREHCLCGHWGRQLHPRDD---GVQGM--TRKLFVWPGDVPGA 145
           S++P+PP        P  R     G   R    R D   GVQG    R    + G  PGA
Sbjct: 3   SSAPHPPIQALFDR-PGSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGA 61

Query: 146 GWRPPSLTSLPPSFLCCCFLLPSSKL---PWCWSSQRRSVTRPATATYSEPHSAHRGCG 201
           G  PP  T  P +        P S+     WCW+    +V   A    S   S   G G
Sbjct: 62  GSAPPGETPAPYTRRSG----PRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFG 116


>gi|145309324 FH2 domain containing 1 [Homo sapiens]
          Length = 1143

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 144 GAGWRPPSLTSLPPSFLCCCFLLPSSKLPWCWSSQRRSVTRPAT 187
           GAGWR P L+S  PS        P S     WS Q  SV R +T
Sbjct: 914 GAGWRRPELSSRGPS------QNPPSSTDTVWSRQ-NSVRRAST 950


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 10/63 (15%)

Query: 96  PPSHCPIPGWPVHREHCLCGHWGRQLHPRDDGVQGMTRKLFVWPGDVPGAGWRPPSLTSL 155
           PP H P P    H++        +   P  D  + +  +    PG  PG G  PP+ +S 
Sbjct: 82  PPPHQPPPHPQPHQQQ-------QPPPPPQDSSKPVVAQ---GPGPAPGVGSAPPASSSA 131

Query: 156 PPS 158
           PP+
Sbjct: 132 PPA 134


>gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo
           sapiens]
          Length = 966

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 7/54 (12%)

Query: 23  ANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV--CQEITLSLDFVDHF 74
           +N++KKQ T  S ++ S++NT++  R     +   KC+  C EI    DF +HF
Sbjct: 579 SNMQKKQSTLASSNKKSKVNTAL--RNLRYRRGIHKCIECCSEIK---DFANHF 627


>gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo
           sapiens]
          Length = 979

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 7/54 (12%)

Query: 23  ANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV--CQEITLSLDFVDHF 74
           +N++KKQ T  S ++ S++NT++  R     +   KC+  C EI    DF +HF
Sbjct: 592 SNMQKKQSTLASSNKKSKVNTAL--RNLRYRRGIHKCIECCSEIK---DFANHF 640


>gi|6005757 chromatin-specific transcription elongation factor large
           subunit [Homo sapiens]
          Length = 1047

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 16  ITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKN 55
           I ++GG  N++   V+D +   F  +  +M  R K  C N
Sbjct: 246 IIQSGGNYNLKFSVVSDKNHMHFGAITCAMGIRFKSYCSN 285


>gi|19923559 EMSY protein [Homo sapiens]
          Length = 1322

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 12/91 (13%)

Query: 16   ITETGGGANIRK--KQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCVCQEITLSLDFVDH 73
            +T+  GG+++ K    VT +S  + SE  T++S  +K++          E  +  + V+H
Sbjct: 1116 VTKITGGSSVPKLTSPVTSISPIQASE-KTAVSDILKMSL--------MEAQIDTN-VEH 1165

Query: 74   FLISNPDKSLLVKLVFPSTSPYPPSHCPIPG 104
             ++  P K+L   ++       P +H  + G
Sbjct: 1166 MIVDPPKKALATSMLTGEAGSLPSTHMVVAG 1196


>gi|10190742 ubiquitin specific peptidase 29 [Homo sapiens]
          Length = 922

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/38 (31%), Positives = 24/38 (63%)

Query: 23  ANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV 60
           A + K +V +VSQ   SE+N+ ++  +K+T +++   V
Sbjct: 555 APVGKCEVLEVSQEMISEINSPLTPSMKLTSESSDSLV 592


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
            sapiens]
          Length = 1560

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 76   ISNPDKSLLVKLVFPSTSPYPPSHCPIP 103
            +++P  S+LV    PS +P  PSH P P
Sbjct: 992  LTSPAASVLVSGQAPSGTPTAPSHAPAP 1019


>gi|149588928 SLAIN motif family, member 2 [Homo sapiens]
          Length = 581

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 1   MTPAKDVDGKTKSKQITETGGGANIRKKQVTDVSQHRFSELNTSMSQRIKVTCKNTSKCV 60
           ++P   +D +  + ++ E   G+N +   VTDV      +  +   +    T + +S   
Sbjct: 246 LSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSS 305

Query: 61  CQEI---TLSLDFVDHFLISNPDKSLLVKLVFPSTSPYPPS 98
           C      T S   +D   + + D + +   V+P+ + + PS
Sbjct: 306 CNSTRRGTFSDQELDAQSLDDEDDN-MHHAVYPAVNRFSPS 345


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.465 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,197,316
Number of Sequences: 37866
Number of extensions: 513230
Number of successful extensions: 1453
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1435
Number of HSP's gapped (non-prelim): 28
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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