Search of human proteins with 239749169

Search of human proteins with 239749169

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749169 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
         (164 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754616 PREDICTED: hypothetical protein isoform 2 [Homo sap...   335   1e-92
gi|239749169 PREDICTED: hypothetical protein isoform 2 [Homo sap...   335   1e-92
gi|239743238 PREDICTED: hypothetical protein isoform 2 [Homo sap...   335   1e-92
gi|239508913 PREDICTED: hypothetical protein isoform 2 [Homo sap...   335   1e-92
gi|239754618 PREDICTED: hypothetical protein isoform 1 [Homo sap...   229   1e-60
gi|239749171 PREDICTED: hypothetical protein isoform 1 [Homo sap...   229   1e-60
gi|239743240 PREDICTED: hypothetical protein isoform 1 [Homo sap...   229   1e-60
gi|239508915 PREDICTED: hypothetical protein isoform 1 [Homo sap...   229   1e-60
gi|4504165 gelsolin isoform a precursor [Homo sapiens]                 30   0.72 
gi|161019170 mucin 5AC [Homo sapiens]                                  30   0.94 
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]       30   0.94 
gi|215422423 CD164 molecule, sialomucin isoform 3 [Homo sapiens]       30   0.94 
gi|215422427 CD164 molecule, sialomucin isoform 5 [Homo sapiens]       29   1.6  
gi|215422425 CD164 molecule, sialomucin isoform 4 [Homo sapiens]       29   1.6  
gi|215422421 CD164 molecule, sialomucin isoform 2 [Homo sapiens]       29   1.6  
gi|21361274 CD164 molecule, sialomucin isoform 1 [Homo sapiens]        29   1.6  
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]    29   2.1  
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]    29   2.1  
gi|8567388 period 3 [Homo sapiens]                                     28   2.7  
gi|148727298 keratin associated protein 10-6 [Homo sapiens]            28   2.7  
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]               28   3.6  
gi|42476164 POU class 2 homeobox 1 [Homo sapiens]                      28   4.6  
gi|32140182 keratin associated protein 10-10 [Homo sapiens]            28   4.6  
gi|38683860 insulin receptor substrate 2 [Homo sapiens]                27   6.1  
gi|33636722 plasticity related gene 1 [Homo sapiens]                   27   6.1  
gi|51173717 actin-binding LIM protein 1 isoform s [Homo sapiens]       27   6.1  
gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens]                27   7.9  
gi|91982772 mucin 17 [Homo sapiens]                                    27   7.9  
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             27   7.9  

>gi|239754616 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 164

 Score =  335 bits (858), Expect = 1e-92
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM 60
           MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM
Sbjct: 1   MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM 60

Query: 61  TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ 120
           TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ
Sbjct: 61  TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ 120

Query: 121 HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164
           HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP
Sbjct: 121 HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164


>gi|239749169 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 164

 Score =  335 bits (858), Expect = 1e-92
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM 60
           MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM
Sbjct: 1   MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM 60

Query: 61  TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ 120
           TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ
Sbjct: 61  TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ 120

Query: 121 HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164
           HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP
Sbjct: 121 HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164


>gi|239743238 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 164

 Score =  335 bits (858), Expect = 1e-92
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM 60
           MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM
Sbjct: 1   MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM 60

Query: 61  TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ 120
           TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ
Sbjct: 61  TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ 120

Query: 121 HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164
           HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP
Sbjct: 121 HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164


>gi|239508913 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 164

 Score =  335 bits (858), Expect = 1e-92
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM 60
           MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM
Sbjct: 1   MMLWAVQDTGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMM 60

Query: 61  TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ 120
           TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ
Sbjct: 61  TRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQ 120

Query: 121 HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164
           HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP
Sbjct: 121 HSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164


>gi|239754618 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 109

 Score =  229 bits (583), Expect = 1e-60
 Identities = 109/109 (100%), Positives = 109/109 (100%)

Query: 56  MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH 115
           MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH
Sbjct: 1   MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH 60

Query: 116 MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164
           MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP
Sbjct: 61  MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 109


>gi|239749171 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 109

 Score =  229 bits (583), Expect = 1e-60
 Identities = 109/109 (100%), Positives = 109/109 (100%)

Query: 56  MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH 115
           MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH
Sbjct: 1   MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH 60

Query: 116 MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164
           MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP
Sbjct: 61  MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 109


>gi|239743240 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 109

 Score =  229 bits (583), Expect = 1e-60
 Identities = 109/109 (100%), Positives = 109/109 (100%)

Query: 56  MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH 115
           MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH
Sbjct: 1   MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH 60

Query: 116 MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164
           MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP
Sbjct: 61  MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 109


>gi|239508915 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 109

 Score =  229 bits (583), Expect = 1e-60
 Identities = 109/109 (100%), Positives = 109/109 (100%)

Query: 56  MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH 115
           MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH
Sbjct: 1   MMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRH 60

Query: 116 MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 164
           MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP
Sbjct: 61  MGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELRTWKAEGIRLWGP 109


>gi|4504165 gelsolin isoform a precursor [Homo sapiens]
          Length = 782

 Score = 30.4 bits (67), Expect = 0.72
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 13/75 (17%)

Query: 94  HRPSQ-MVCEVTMLL-----PMKAVTRHMGSAQHSMTASQPRTASAMPITCSPMEAIVQR 147
           HRP+  ++C +++ L     P++A T   G++Q    A Q R   A P +      +V+ 
Sbjct: 4   HRPAPALLCALSLALCALSLPVRAATASRGASQAG--APQGRVPEARPNSM-----VVEH 56

Query: 148 PRELRTWKAEGIRLW 162
           P  L+  K  G+++W
Sbjct: 57  PEFLKAGKEPGLQIW 71


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 30.0 bits (66), Expect = 0.94
 Identities = 35/105 (33%), Positives = 41/105 (39%), Gaps = 17/105 (16%)

Query: 10   GTITIRPANRN--TTPATIMVLALALSS-----SRQLVHLPPT------TDSSTPRAATM 56
            GT T  PA R+  TTP    V A+  SS     +R      PT      T SSTP     
Sbjct: 3800 GTATALPALRSTATTPTATSVTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVHT 3859

Query: 57   MLMMTRARAACRSCGSA---SSESYTLHCI-WPVLCTTQFIHRPS 97
              ++T      R+ GS    SS   T H    P   TT F   PS
Sbjct: 3860 STVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTATPS 3904


>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
          Length = 5765

 Score = 30.0 bits (66), Expect = 0.94
 Identities = 35/105 (33%), Positives = 41/105 (39%), Gaps = 17/105 (16%)

Query: 10   GTITIRPANRN--TTPATIMVLALALSS-----SRQLVHLPPT------TDSSTPRAATM 56
            GT T  PA R+  TTP    V A+  SS     +R      PT      T SSTP     
Sbjct: 3220 GTATALPALRSTATTPTATSVTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVHT 3279

Query: 57   MLMMTRARAACRSCGSA---SSESYTLHCI-WPVLCTTQFIHRPS 97
              ++T      R+ GS    SS   T H    P   TT F   PS
Sbjct: 3280 STVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTATPS 3324



 Score = 30.0 bits (66), Expect = 0.94
 Identities = 36/145 (24%), Positives = 55/145 (37%), Gaps = 13/145 (8%)

Query: 9    TGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMMTRARAACR 68
            TG+ T   +   TTP T ++ + A + +         T SS+PR AT + ++T       
Sbjct: 4693 TGSTTNPSSTPGTTPITPVLTSTATTPAATS---SKATSSSSPRTATTLPVLTSTATKST 4749

Query: 69   SCGSASSESYTLHCIWPV-------LCTTQFIHRPS--QMVCEVTMLLPMKAVTRHMGS- 118
            +       S TL   W V       + T   IH  S  +     T+L     +TR   S 
Sbjct: 4750 ATSFTPIPSSTLWTTWTVPAQTTTPMSTMSTIHTSSTPETTHTSTVLTTTATMTRATNST 4809

Query: 119  AQHSMTASQPRTASAMPITCSPMEA 143
            A  S T    R  + +  T +   A
Sbjct: 4810 ATPSSTLGTTRILTELTTTATTTAA 4834



 Score = 28.9 bits (63), Expect = 2.1
 Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)

Query: 9    TGTITIRPANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATM--------MLMM 60
            T T T   A  +++P T +   + +S++       PTT  ST   +++        +L  
Sbjct: 4598 TTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTT 4657

Query: 61   TRARAACRSCGSASSESYT------LHCIWPVLCTTQFIHRPSQM--VCEVTMLLPMKAV 112
            T    A  S  + SS + T      L      +  T     PS       +T +L   A 
Sbjct: 4658 TTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPITPVLTSTAT 4717

Query: 113  TRHMGSAQHSMTASQPRTASAMPITCS 139
            T    S++ + ++S PRTA+ +P+  S
Sbjct: 4718 TPAATSSK-ATSSSSPRTATTLPVLTS 4743


>gi|215422423 CD164 molecule, sialomucin isoform 3 [Homo sapiens]
          Length = 178

 Score = 30.0 bits (66), Expect = 0.94
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 17/148 (11%)

Query: 2   MLWAVQDTGTITIRPANRNTT--PATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLM 59
           +LWA    G + +  A++NTT  P    +  ++  +S  +  LP  T   TP   T    
Sbjct: 8   LLWAATCLGVLCVLSADKNTTQHPNVTTLAPISNVTSAPVTSLPLVT---TPAPET---- 60

Query: 60  MTRARAACRSCGSASSESYTLHCIWPVLCTTQFI--HRPSQMVCEVTMLLPMKAVT--RH 115
               R +C SC + S  + T  C W + C  +    H  +   C+V       +V+    
Sbjct: 61  -CEGRNSCVSCFNVSVVNTT--CFW-IECKDESYCSHNSTVSDCQVGNTTDFCSVSTATP 116

Query: 116 MGSAQHSMTASQPRTASAMPITCSPMEA 143
           + +A  + T +   T ++ P+  S  +A
Sbjct: 117 VPTANSTGTTNNTVTPTSQPVRKSTFDA 144


>gi|215422427 CD164 molecule, sialomucin isoform 5 [Homo sapiens]
          Length = 157

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 12/85 (14%)

Query: 2  MLWAVQDTGTITIRPANRNTT--PATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLM 59
          +LWA    G + +  A++NTT  P    +  ++  +S  +  LP  T   TP   T    
Sbjct: 8  LLWAATCLGVLCVLSADKNTTQHPNVTTLAPISNVTSAPVTSLPLVT---TPAPET---- 60

Query: 60 MTRARAACRSCGSASSESYTLHCIW 84
              R +C SC + S  + T  C W
Sbjct: 61 -CEGRNSCVSCFNVSVVNTT--CFW 82


>gi|215422425 CD164 molecule, sialomucin isoform 4 [Homo sapiens]
          Length = 189

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 12/85 (14%)

Query: 2  MLWAVQDTGTITIRPANRNTT--PATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLM 59
          +LWA    G + +  A++NTT  P    +  ++  +S  +  LP  T   TP   T    
Sbjct: 8  LLWAATCLGVLCVLSADKNTTQHPNVTTLAPISNVTSAPVTSLPLVT---TPAPET---- 60

Query: 60 MTRARAACRSCGSASSESYTLHCIW 84
              R +C SC + S  + T  C W
Sbjct: 61 -CEGRNSCVSCFNVSVVNTT--CFW 82


>gi|215422421 CD164 molecule, sialomucin isoform 2 [Homo sapiens]
          Length = 184

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 12/85 (14%)

Query: 2  MLWAVQDTGTITIRPANRNTT--PATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLM 59
          +LWA    G + +  A++NTT  P    +  ++  +S  +  LP  T   TP   T    
Sbjct: 8  LLWAATCLGVLCVLSADKNTTQHPNVTTLAPISNVTSAPVTSLPLVT---TPAPET---- 60

Query: 60 MTRARAACRSCGSASSESYTLHCIW 84
              R +C SC + S  + T  C W
Sbjct: 61 -CEGRNSCVSCFNVSVVNTT--CFW 82


>gi|21361274 CD164 molecule, sialomucin isoform 1 [Homo sapiens]
          Length = 197

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 12/85 (14%)

Query: 2  MLWAVQDTGTITIRPANRNTT--PATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLM 59
          +LWA    G + +  A++NTT  P    +  ++  +S  +  LP  T   TP   T    
Sbjct: 8  LLWAATCLGVLCVLSADKNTTQHPNVTTLAPISNVTSAPVTSLPLVT---TPAPET---- 60

Query: 60 MTRARAACRSCGSASSESYTLHCIW 84
              R +C SC + S  + T  C W
Sbjct: 61 -CEGRNSCVSCFNVSVVNTT--CFW 82


>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
          Length = 1013

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 16  PANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMMTRARAACRSCGSASS 75
           PA+R+   A+      AL +S  L  LPP T  + P  AT     + + ++  S  S+SS
Sbjct: 42  PAHRSVLAASSPFFREALLTSAPL-PLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSS 100

Query: 76  ES 77
            S
Sbjct: 101 AS 102


>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
          Length = 1013

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 16  PANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMMTRARAACRSCGSASS 75
           PA+R+   A+      AL +S  L  LPP T  + P  AT     + + ++  S  S+SS
Sbjct: 42  PAHRSVLAASSPFFREALLTSAPL-PLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSS 100

Query: 76  ES 77
            S
Sbjct: 101 AS 102


>gi|8567388 period 3 [Homo sapiens]
          Length = 1201

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 84  WPVLCTTQFIHRPSQMVCEVTMLLPMKAVTRHMGSAQHSMTASQPRTASAMPITCSPMEA 143
           +P L T   +  P   VC   +L P       +G+   S  A  P  +SAM  T  P  +
Sbjct: 841 FPYLDTFMTVFLPDPPVCP--LLSPSFLPCPFLGATASS--AISPSMSSAMSPTLDPPPS 896

Query: 144 IVQRPRELRTWKAE 157
           +  + RE   W+A+
Sbjct: 897 VTSQRREEEKWEAQ 910


>gi|148727298 keratin associated protein 10-6 [Homo sapiens]
          Length = 365

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 8/99 (8%)

Query: 43  PPTTDSSTPRAATMMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVCE 102
           P    SS  + A  + + + A  +C    S      T  C  P    +   H     VC+
Sbjct: 258 PACCTSSPCQHACCVPVCSGASTSCCQQSSCQPACCTASCCRPSSSVSLLCHP----VCK 313

Query: 103 VTMLLPMKAVTRHMGSAQHSMTASQPRTASAMPITCSPM 141
            T  +P+ +     G++  S   S  RTAS + + C PM
Sbjct: 314 STCCVPVPSC----GASASSCQPSCCRTASCVSLLCRPM 348


>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
          Length = 1860

 Score = 28.1 bits (61), Expect = 3.6
 Identities = 17/55 (30%), Positives = 26/55 (47%)

Query: 96  PSQMVCEVTMLLPMKAVTRHMGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRE 150
           P++     T ++P+K+      +A  S T S   T   +P T  P+ A V RP E
Sbjct: 369 PTKPSAPSTSIVPIKSPHPTQKTAPSSFTKSALPTQKQVPPTSRPVPARVSRPAE 423


>gi|42476164 POU class 2 homeobox 1 [Homo sapiens]
          Length = 743

 Score = 27.7 bits (60), Expect = 4.6
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 111 AVTRHMGSAQHSMTASQPRTASAMPITCSPMEAIVQRPRELR 152
           AV +H  S QHS   +    ++A P+T  P+   +Q  ++L+
Sbjct: 136 AVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQ 177


>gi|32140182 keratin associated protein 10-10 [Homo sapiens]
          Length = 251

 Score = 27.7 bits (60), Expect = 4.6
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 11/105 (10%)

Query: 44  PTTDSSTP-RAATMMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQM--- 99
           PT  +S+P + A  + + +++      C  AS+         P  CT       S +   
Sbjct: 134 PTCCTSSPCQQACCVPVCSKSVCYVPVCSGASTSCCQQSSCQPACCTASCCRPSSSVSLL 193

Query: 100 ---VCEVTMLLPMKAVTRHMGSAQHSMTASQPRTASAMPITCSPM 141
              VC+ T  +P+ +     G++  S   S  RTAS + + C P+
Sbjct: 194 CHPVCKSTCCVPVPSC----GASASSCQPSCCRTASCVSLLCRPV 234


>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
          Length = 1338

 Score = 27.3 bits (59), Expect = 6.1
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 15  RPANRNTTPATIMVLALALSSSRQ---LVHLPPTTDSSTPRAATMMLMMTRARAACRSC 70
           RP +++ +  +     +++  +R+   LV+LPP+      R+ T  L  T   A C SC
Sbjct: 301 RPRSKSQSSGSSATHPISVPGARRHHHLVNLPPSQTGLVRRSRTDSLAATPPAAKCSSC 359


>gi|33636722 plasticity related gene 1 [Homo sapiens]
          Length = 763

 Score = 27.3 bits (59), Expect = 6.1
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 16  PANRNTTPATIMVLALALSSSRQLVHLPPTTD---SSTPRAATMMLMMTRARAACRSCGS 72
           P   N+ P    V   +   S QLVH+P  T    S++P++++      +A     +C  
Sbjct: 510 PGCNNSMPGGPRVSIQSRPGSSQLVHIPEETQENISTSPKSSSARAKWLKAAEKTVACNR 569

Query: 73  ASSESYTLHCI 83
           ++S+   +  I
Sbjct: 570 SNSQPRIMQVI 580


>gi|51173717 actin-binding LIM protein 1 isoform s [Homo sapiens]
          Length = 455

 Score = 27.3 bits (59), Expect = 6.1
 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 37  RQLVHLPPTTDSSTPRAATMMLMMTRARAACRSCGSASSESYTLHCIWPVLC-TTQFIHR 95
           RQ +   P T S TP A     +  R      S GS +S  Y+ H   P    + Q  HR
Sbjct: 132 RQSLGESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQHFHR 191

Query: 96  PSQ 98
           P Q
Sbjct: 192 PDQ 194


>gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens]
          Length = 739

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 11  TITIRPANRNTTPATIMVL------ALALSSSRQLVHLPPTTDSSTPRAATMMLMMTRAR 64
           T+   P  R++ PA   +L      AL   +SR+   LPP T  + PRA    L +   R
Sbjct: 504 TVHSTPVRRSSGPAPQSLLSARRVSALPTPASRRCSGLPPMTPKTMPRAVGSPLCVPARR 563


>gi|91982772 mucin 17 [Homo sapiens]
          Length = 4493

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 20/137 (14%)

Query: 16   PANRNTTPATIMVLALALSSSRQLVHLPPTTDSSTPRAATMMLMMTRARAACRSCGSASS 75
            P+   +TP T    + +  +  +++ LP +T S      T+M + T +       G+AS 
Sbjct: 3599 PSVDRSTPVTTSTQSNSTPTPPEVITLPMSTPSEVSTPLTIMPVSTTS-VTISEAGTAS- 3656

Query: 76   ESYTLHCIWPVLCTTQF-------------IHRPSQMVCEVTMLLPMKAVTRHMGSAQHS 122
             +  +    PV+ +TQ              I  PS+     T L  M   T  + S++ S
Sbjct: 3657 -TLPVDTSTPVITSTQVSSSPVTPEGTTMPIWTPSE---GSTPLTTMPVSTTRVTSSEGS 3712

Query: 123  MTASQPRTASAMPITCS 139
             T S P   ++ P+T S
Sbjct: 3713 -TLSTPSVVTSTPVTTS 3728


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 20/107 (18%)

Query: 42   LPPTTDSSTPRAATMMLMMTRARAACRSCGSASSESYTLHCIWPVLCTTQFIHRPSQMVC 101
            LPP+T +S P + +  L  T          +++S       + PVL +T           
Sbjct: 1754 LPPSTSASVPASTSAPLPATLTPVP-----ASTSAPVPASTLAPVLASTS---------- 1798

Query: 102  EVTMLLPMKAVTRHMGSAQHSMTASQPRTASAMPITCSPMEAIVQRP 148
                  P+ A      SA  S++AS P + SA  IT S   A    P
Sbjct: 1799 -----APVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAP 1840


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.126    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,225,623
Number of Sequences: 37866
Number of extensions: 234572
Number of successful extensions: 1156
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1138
Number of HSP's gapped (non-prelim): 41
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.