BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239748428 PREDICTED: hypothetical protein XP_002346657 [Homo sapiens] (215 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239753867 PREDICTED: hypothetical protein [Homo sapiens] 454 e-128 gi|239748428 PREDICTED: hypothetical protein XP_002346657 [Homo ... 454 e-128 gi|239742361 PREDICTED: hypothetical protein XP_002342502 [Homo ... 454 e-128 gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] 44 1e-04 gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 40 0.001 gi|239754297 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002 gi|239748836 PREDICTED: hypothetical protein XP_002346833 [Homo ... 40 0.002 gi|239742863 PREDICTED: hypothetical protein XP_002342665 [Homo ... 40 0.002 gi|126352608 elastin isoform e precursor [Homo sapiens] 39 0.003 gi|126352440 elastin isoform a precursor [Homo sapiens] 39 0.003 gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007 gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 38 0.007 gi|239746658 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007 gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 38 0.007 gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 37 0.010 gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 37 0.010 gi|239754772 PREDICTED: hypothetical protein [Homo sapiens] 37 0.010 gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ... 37 0.010 gi|239749310 PREDICTED: hypothetical protein XP_002346992 [Homo ... 37 0.010 gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo ... 37 0.010 gi|239743404 PREDICTED: hypothetical protein XP_002342840 [Homo ... 37 0.010 gi|239509103 PREDICTED: hypothetical protein [Homo sapiens] 37 0.010 gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas... 37 0.013 gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas... 37 0.013 gi|126352700 elastin isoform b precursor [Homo sapiens] 36 0.022 gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 36 0.022 gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 36 0.022 gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 36 0.022 gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 36 0.022 gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 36 0.022 >gi|239753867 PREDICTED: hypothetical protein [Homo sapiens] Length = 215 Score = 454 bits (1167), Expect = e-128 Identities = 215/215 (100%), Positives = 215/215 (100%) Query: 1 MRKSEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLA 60 MRKSEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLA Sbjct: 1 MRKSEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLA 60 Query: 61 GRLRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPRLAGAL 120 GRLRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPRLAGAL Sbjct: 61 GRLRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPRLAGAL 120 Query: 121 LSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRPGL 180 LSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRPGL Sbjct: 121 LSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRPGL 180 Query: 181 AARLGSRPSGPLRGAGRGARVRRPGRRGPCGALAS 215 AARLGSRPSGPLRGAGRGARVRRPGRRGPCGALAS Sbjct: 181 AARLGSRPSGPLRGAGRGARVRRPGRRGPCGALAS 215 >gi|239748428 PREDICTED: hypothetical protein XP_002346657 [Homo sapiens] Length = 215 Score = 454 bits (1167), Expect = e-128 Identities = 215/215 (100%), Positives = 215/215 (100%) Query: 1 MRKSEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLA 60 MRKSEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLA Sbjct: 1 MRKSEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLA 60 Query: 61 GRLRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPRLAGAL 120 GRLRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPRLAGAL Sbjct: 61 GRLRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPRLAGAL 120 Query: 121 LSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRPGL 180 LSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRPGL Sbjct: 121 LSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRPGL 180 Query: 181 AARLGSRPSGPLRGAGRGARVRRPGRRGPCGALAS 215 AARLGSRPSGPLRGAGRGARVRRPGRRGPCGALAS Sbjct: 181 AARLGSRPSGPLRGAGRGARVRRPGRRGPCGALAS 215 >gi|239742361 PREDICTED: hypothetical protein XP_002342502 [Homo sapiens] Length = 215 Score = 454 bits (1167), Expect = e-128 Identities = 215/215 (100%), Positives = 215/215 (100%) Query: 1 MRKSEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLA 60 MRKSEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLA Sbjct: 1 MRKSEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLA 60 Query: 61 GRLRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPRLAGAL 120 GRLRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPRLAGAL Sbjct: 61 GRLRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPRLAGAL 120 Query: 121 LSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRPGL 180 LSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRPGL Sbjct: 121 LSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRPGL 180 Query: 181 AARLGSRPSGPLRGAGRGARVRRPGRRGPCGALAS 215 AARLGSRPSGPLRGAGRGARVRRPGRRGPCGALAS Sbjct: 181 AARLGSRPSGPLRGAGRGARVRRPGRRGPCGALAS 215 >gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] Length = 352 Score = 43.9 bits (102), Expect = 1e-04 Identities = 54/189 (28%), Positives = 68/189 (35%), Gaps = 35/189 (18%) Query: 4 SEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGRL 63 ++ G RGCG G P P G G R R G G R G GAAL + Sbjct: 44 ADTGVRGCGARG---------PAPLLASAG--GGRARDG---TWGVRTKGSGAALPS--- 86 Query: 64 RPRRRWAPGAGPVAACRPRAAAAGG---PTDGKGRGSCQRVAGPLRWRNLLFLPRLAGAL 120 RP R AP + P A GG P G+ RG+ V R R Sbjct: 87 RPASRAAPRPEASSPPLPLEKARGGLSGPQGGRARGAMAHVGSRKRSR------------ 134 Query: 121 LSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRPGL 180 S S + K SR+ T R A T +GR+ + PG E + R R Sbjct: 135 ---SRSRSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEERSKQKARRRTRSSS 191 Query: 181 AARLGSRPS 189 ++ S S Sbjct: 192 SSSSSSSSS 200 Score = 30.8 bits (68), Expect = 0.91 Identities = 48/145 (33%), Positives = 57/145 (39%), Gaps = 18/145 (12%) Query: 45 EAQGARWPGGGAALLAGRLRPRRRWAPGAGPVAACRPRAA----AAGGPTDGKGRGS--- 97 E G GGA GRL PR APGA + AC RAA AA T +G G+ Sbjct: 2 ERAGPAGEEGGAR--EGRLLPR---APGAWVLRACAERAALEVGAASADTGVRGCGARGP 56 Query: 98 --CQRVAGPLRWRNLLFLPRLAG---ALLSLSVSLTLSLPGWKFPLTSREHTDRRTHART 152 AG R R+ + R G AL S S P P E R + Sbjct: 57 APLLASAGGGRARDGTWGVRTKGSGAALPSRPASRAAPRPEASSPPLPLEKA-RGGLSGP 115 Query: 153 QRGREVGSLPGVGEARTSRGAVRPR 177 Q GR G++ VG + SR R R Sbjct: 116 QGGRARGAMAHVGSRKRSRSRSRSR 140 >gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] Length = 360 Score = 40.4 bits (93), Expect = 0.001 Identities = 49/163 (30%), Positives = 60/163 (36%), Gaps = 35/163 (21%) Query: 4 SEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGRL 63 ++ G RGCG G P P G G R R G G R G GAAL + Sbjct: 44 ADTGVRGCGARG---------PAPLLASAG--GGRARDG---TWGVRTKGSGAALPS--- 86 Query: 64 RPRRRWAPGAGPVAACRPRAAAAGG---PTDGKGRGSCQRVAGPLRWRNLLFLPRLAGAL 120 RP R AP + P A GG P G+ RG+ V R R Sbjct: 87 RPASRAAPRPEASSPPLPLEKARGGLSGPQGGRARGAMAHVGSRKRSR------------ 134 Query: 121 LSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPG 163 S S + K SR+ T R A T +GR+ + PG Sbjct: 135 ---SRSRSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTAPG 174 Score = 30.8 bits (68), Expect = 0.91 Identities = 48/145 (33%), Positives = 57/145 (39%), Gaps = 18/145 (12%) Query: 45 EAQGARWPGGGAALLAGRLRPRRRWAPGAGPVAACRPRAA----AAGGPTDGKGRGS--- 97 E G GGA GRL PR APGA + AC RAA AA T +G G+ Sbjct: 2 ERAGPAGEEGGAR--EGRLLPR---APGAWVLRACAERAALEVGAASADTGVRGCGARGP 56 Query: 98 --CQRVAGPLRWRNLLFLPRLAG---ALLSLSVSLTLSLPGWKFPLTSREHTDRRTHART 152 AG R R+ + R G AL S S P P E R + Sbjct: 57 APLLASAGGGRARDGTWGVRTKGSGAALPSRPASRAAPRPEASSPPLPLEKA-RGGLSGP 115 Query: 153 QRGREVGSLPGVGEARTSRGAVRPR 177 Q GR G++ VG + SR R R Sbjct: 116 QGGRARGAMAHVGSRKRSRSRSRSR 140 >gi|239754297 PREDICTED: hypothetical protein [Homo sapiens] Length = 175 Score = 39.7 bits (91), Expect = 0.002 Identities = 37/99 (37%), Positives = 39/99 (39%), Gaps = 21/99 (21%) Query: 11 CGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGRLRPRRRWA 70 C GRTWA SPE G R R RWP G A L P Sbjct: 49 CSAPAGRTWA--------SPETFSSGSRRAR--------RWPCGAPACTR-TLSPALAAR 91 Query: 71 P-GAGPVAACRPRAAAAGGPTDGKGRGSC--QRVAGPLR 106 P G GP A RPR P D + RG C QR+ PLR Sbjct: 92 PAGRGPCAG-RPRRCGCRDPADSRARGCCQPQRLDVPLR 129 >gi|239748836 PREDICTED: hypothetical protein XP_002346833 [Homo sapiens] Length = 175 Score = 39.7 bits (91), Expect = 0.002 Identities = 37/99 (37%), Positives = 39/99 (39%), Gaps = 21/99 (21%) Query: 11 CGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGRLRPRRRWA 70 C GRTWA SPE G R R RWP G A L P Sbjct: 49 CSAPAGRTWA--------SPETFSSGSRRAR--------RWPCGAPACTR-TLSPALAAR 91 Query: 71 P-GAGPVAACRPRAAAAGGPTDGKGRGSC--QRVAGPLR 106 P G GP A RPR P D + RG C QR+ PLR Sbjct: 92 PAGRGPCAG-RPRRCGCRDPADSRARGCCQPQRLDVPLR 129 >gi|239742863 PREDICTED: hypothetical protein XP_002342665 [Homo sapiens] Length = 175 Score = 39.7 bits (91), Expect = 0.002 Identities = 37/99 (37%), Positives = 39/99 (39%), Gaps = 21/99 (21%) Query: 11 CGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGRLRPRRRWA 70 C GRTWA SPE G R R RWP G A L P Sbjct: 49 CSAPAGRTWA--------SPETFSSGSRRAR--------RWPCGAPACTR-TLSPALAAR 91 Query: 71 P-GAGPVAACRPRAAAAGGPTDGKGRGSC--QRVAGPLR 106 P G GP A RPR P D + RG C QR+ PLR Sbjct: 92 PAGRGPCAG-RPRRCGCRDPADSRARGCCQPQRLDVPLR 129 >gi|126352608 elastin isoform e precursor [Homo sapiens] Length = 705 Score = 38.9 bits (89), Expect = 0.003 Identities = 45/158 (28%), Positives = 59/158 (37%), Gaps = 22/158 (13%) Query: 52 PGGGAALLAGRLRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLL 111 PGG + G + P + PGAG A GG G G + V G L Sbjct: 26 PGGVPGAIPGGV-PGGVFYPGAG--------LGALGGGALGPGGKPLKPVPGGLAG---- 72 Query: 112 FLPRLAGALLSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSR 171 AG L ++ PG P + + + G +G +PGVG S Sbjct: 73 -----AGLGAGLGAFPAVTFPGALVPGGVADAA--AAYKAAKAGAGLGGVPGVGGLGVSA 125 Query: 172 GAVRPRPGLAARLGSRPSGPLRGAGRGARVRRPGRRGP 209 GAV P+PG + G P L G G + PG R P Sbjct: 126 GAVVPQPGAGVKPGKVPGVGLPGVYPGGVL--PGARFP 161 Score = 33.5 bits (75), Expect = 0.14 Identities = 34/94 (36%), Positives = 38/94 (40%), Gaps = 14/94 (14%) Query: 7 GWRGCGGLGGRTWATRPLPGP-----HSPEFGLPGWRVRRGRREAQGARWPGGG---AAL 58 G G GGLG A P PG P GLPG V G GAR+PG G Sbjct: 114 GVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPG--VYPG-GVLPGARFPGVGVLPGVP 170 Query: 59 LAGRLRPRRRWAPGAGPVAACRPRAAAAGGPTDG 92 ++P+ APG G A P GGP G Sbjct: 171 TGAGVKPK---APGVGGAFAGIPGVGPFGGPQPG 201 >gi|126352440 elastin isoform a precursor [Homo sapiens] Length = 724 Score = 38.9 bits (89), Expect = 0.003 Identities = 45/158 (28%), Positives = 59/158 (37%), Gaps = 22/158 (13%) Query: 52 PGGGAALLAGRLRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLL 111 PGG + G + P + PGAG A GG G G + V G L Sbjct: 26 PGGVPGAIPGGV-PGGVFYPGAG--------LGALGGGALGPGGKPLKPVPGGLAG---- 72 Query: 112 FLPRLAGALLSLSVSLTLSLPGWKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSR 171 AG L ++ PG P + + + G +G +PGVG S Sbjct: 73 -----AGLGAGLGAFPAVTFPGALVPGGVADAA--AAYKAAKAGAGLGGVPGVGGLGVSA 125 Query: 172 GAVRPRPGLAARLGSRPSGPLRGAGRGARVRRPGRRGP 209 GAV P+PG + G P L G G + PG R P Sbjct: 126 GAVVPQPGAGVKPGKVPGVGLPGVYPGGVL--PGARFP 161 Score = 33.5 bits (75), Expect = 0.14 Identities = 34/94 (36%), Positives = 38/94 (40%), Gaps = 14/94 (14%) Query: 7 GWRGCGGLGGRTWATRPLPGP-----HSPEFGLPGWRVRRGRREAQGARWPGGG---AAL 58 G G GGLG A P PG P GLPG V G GAR+PG G Sbjct: 114 GVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPG--VYPG-GVLPGARFPGVGVLPGVP 170 Query: 59 LAGRLRPRRRWAPGAGPVAACRPRAAAAGGPTDG 92 ++P+ APG G A P GGP G Sbjct: 171 TGAGVKPK---APGVGGAFAGIPGVGPFGGPQPG 201 >gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] Length = 466 Score = 37.7 bits (86), Expect = 0.007 Identities = 58/201 (28%), Positives = 70/201 (34%), Gaps = 25/201 (12%) Query: 7 GWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGAR--WPGGGAALLAGRLR 64 G + CGG + RPL + G GR G R PGGG + AG R Sbjct: 129 GAQSCGGPAPASALRRPLTQWDASGGG--------GRASHSGPRAGTPGGGRSSRAGARR 180 Query: 65 PRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPR--LAGALLS 122 P++ C P G +G GS +G L+ AGA Sbjct: 181 KT--------PLSLC-PLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQ 231 Query: 123 LSVSLTLSLPGWKFP----LTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRP 178 + S + PG P L T R H QR R ART R RP Sbjct: 232 VRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTGARTLPTPSRARP 291 Query: 179 GLAARLGSRPSGPLRGAGRGA 199 G A GS P LRG G G+ Sbjct: 292 GKPAPRGSAPPARLRGGGGGS 312 >gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo sapiens] Length = 935 Score = 37.7 bits (86), Expect = 0.007 Identities = 59/205 (28%), Positives = 72/205 (35%), Gaps = 36/205 (17%) Query: 16 GRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGRLRPRRRWAPGAGP 75 G P P SP LPG Q A P G R RP W+P A Sbjct: 707 GEAERRHPPPCHKSPALKLPGMTTGA---TTQTATLPDGQT----DRARP---WSPPAPG 756 Query: 76 VAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPRLAGALLSLSVSLTLSLPGWK 135 + R R A GP G G +R R R+ R LT S G + Sbjct: 757 ESRDRARGAGQPGPGSGSG---AERAGPERRARDTQTRTR--------RDKLTDSARGGR 805 Query: 136 FPLTS----REHTDRRTHARTQRG--REVGSLPGVGEARTSRGAVRPRPGLAARLGSRPS 189 LT+ R + RR T +G R S GE+R RP P +A + PS Sbjct: 806 ARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESR------RPLPANSAGRPALPS 859 Query: 190 GPLRGAGRGA---RVRRPGRRGPCG 211 + RG+ R RP R P G Sbjct: 860 PAAARSARGSWGLRASRPSRAAPRG 884 >gi|239746658 PREDICTED: hypothetical protein [Homo sapiens] Length = 411 Score = 37.7 bits (86), Expect = 0.007 Identities = 54/194 (27%), Positives = 67/194 (34%), Gaps = 8/194 (4%) Query: 17 RTWATRPLPGPHSPEFGLPGWRV---RRGRREAQGARWPGGGAALLAGRLRPRRRWAPGA 73 R A +P GPH+P P R A A P +L A PR W P A Sbjct: 9 RRRAAQPAVGPHAPPSATPRHPTPPHATLRPAAAPAHSPQSLQSLNAPPSPPRHPWTPEA 68 Query: 74 GPVAACRPRAAAAGGPTDGKGRGSCQRVAGPLRWRNLLFLPRLAGALLSLSVSLTLSLPG 133 C+ + G + +GR S ++ GP PR A L L SLP Sbjct: 69 MGTGGCQGKVKFFLGIRE-RGRSS-RKHQGPRELGRPPHPPRARSATLYPHPKLGSSLPF 126 Query: 134 WKFPLTSREHTDRRTHARTQRGREVGSLPGVGEARTSRGAVRPRPGLAARLGSRPSGPLR 193 F S A + R PG G +R A +PGL+A G Sbjct: 127 TPFRAMSTFPGVGAGDALPRLPRAGTEAPGKGAREGTRRAPVRKPGLSAGAGIWDP---N 183 Query: 194 GAGRGARVRRPGRR 207 G R RPG R Sbjct: 184 AVAAGPRPGRPGLR 197 >gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] Length = 430 Score = 37.7 bits (86), Expect = 0.007 Identities = 35/96 (36%), Positives = 41/96 (42%), Gaps = 14/96 (14%) Query: 10 GCGGLGGRTWATRPLPGPHS-PEFGLPGWRVRRGRREAQGARWPGGGA-ALLAGRLRPRR 67 GCG G RP PG + P G RRG+ G+ P GA L G PRR Sbjct: 26 GCGSPGRGRRGPRPGPGDEAAPALG------RRGK----GSGGPEAGADGLSRGERGPRR 75 Query: 68 RWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAG 103 P A PRA+ AG +DG G G R +G Sbjct: 76 AAVPELSAQPAGSPRASLAG--SDGGGGGGSARSSG 109 >gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo sapiens] Length = 1487 Score = 37.4 bits (85), Expect = 0.010 Identities = 35/101 (34%), Positives = 36/101 (35%), Gaps = 6/101 (5%) Query: 3 KSEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGR 62 K E G G G G PGP P GLPG R R G A GAR G G Sbjct: 299 KGEAGAPGVKGESGSP-GENGSPGPMGPR-GLPGERGRTGPAGAAGARGNDG----QPGP 352 Query: 63 LRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAG 103 P P GP P A GPT +G Q G Sbjct: 353 AGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRG 393 Score = 33.5 bits (75), Expect = 0.14 Identities = 71/228 (31%), Positives = 79/228 (34%), Gaps = 49/228 (21%) Query: 7 GWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGRLRPR 66 G RG G G T A P PGP P G R QGA P G L P Sbjct: 627 GLRGLPGKDGETGAAGP-PGPAGPA----------GERGEQGAPGPSGFQGLPGPPGPPG 675 Query: 67 RRWAPGAGPVAACRPRAAAAG--GPTDGKG----RGS--CQRVAGPLRWRNLLFLPRLAG 118 PG V A A G GP +G RGS Q + GP LP G Sbjct: 676 EGGKPGDQGVPG---EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG------LPGTPG 726 Query: 119 ALLSLSVSLTLSLPGWKFPLTSREHTDRRTHA-----RTQRGREVGS-----LPGVGEAR 168 S PG + P + R A + RG +VG PG R Sbjct: 727 TDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRG-DVGEKGPEGAPGKDGGR 785 Query: 169 TSRGAVRPRPGLAARLGSR----PSGPLRGAG-RGARVRRPGRRGPCG 211 G + P PG A G + P GP AG RGA PG RG G Sbjct: 786 GLTGPIGP-PGPAGANGEKGEVGPPGPAGSAGARGA----PGERGETG 828 >gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo sapiens] Length = 1418 Score = 37.4 bits (85), Expect = 0.010 Identities = 35/101 (34%), Positives = 36/101 (35%), Gaps = 6/101 (5%) Query: 3 KSEWGWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGR 62 K E G G G G PGP P GLPG R R G A GAR G G Sbjct: 230 KGEAGAPGVKGESGSP-GENGSPGPMGPR-GLPGERGRTGPAGAAGARGNDG----QPGP 283 Query: 63 LRPRRRWAPGAGPVAACRPRAAAAGGPTDGKGRGSCQRVAG 103 P P GP P A GPT +G Q G Sbjct: 284 AGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRG 324 Score = 33.5 bits (75), Expect = 0.14 Identities = 71/228 (31%), Positives = 79/228 (34%), Gaps = 49/228 (21%) Query: 7 GWRGCGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGRLRPR 66 G RG G G T A P PGP P G R QGA P G L P Sbjct: 558 GLRGLPGKDGETGAAGP-PGPAGPA----------GERGEQGAPGPSGFQGLPGPPGPPG 606 Query: 67 RRWAPGAGPVAACRPRAAAAG--GPTDGKG----RGS--CQRVAGPLRWRNLLFLPRLAG 118 PG V A A G GP +G RGS Q + GP LP G Sbjct: 607 EGGKPGDQGVPG---EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG------LPGTPG 657 Query: 119 ALLSLSVSLTLSLPGWKFPLTSREHTDRRTHA-----RTQRGREVGS-----LPGVGEAR 168 S PG + P + R A + RG +VG PG R Sbjct: 658 TDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRG-DVGEKGPEGAPGKDGGR 716 Query: 169 TSRGAVRPRPGLAARLGSR----PSGPLRGAG-RGARVRRPGRRGPCG 211 G + P PG A G + P GP AG RGA PG RG G Sbjct: 717 GLTGPIGP-PGPAGANGEKGEVGPPGPAGSAGARGA----PGERGETG 759 >gi|239754772 PREDICTED: hypothetical protein [Homo sapiens] Length = 95 Score = 37.4 bits (85), Expect = 0.010 Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Query: 38 RVRRGRREAQGARWPGGGAALLAG------RLRPRRRWAPGAGPVAACRPRAAA---AGG 88 R RR RR+AQG R GGG AG + RP PG G A PRAA+ G Sbjct: 25 RERRTRRDAQGPR--GGGPGFRAGGRRTPDKGRPGSPGVPGGGGAEAWGPRAASRTRLAG 82 Query: 89 PTDGKG 94 DG+G Sbjct: 83 SRDGEG 88 >gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo sapiens] Length = 492 Score = 37.4 bits (85), Expect = 0.010 Identities = 35/87 (40%), Positives = 38/87 (43%), Gaps = 15/87 (17%) Query: 2 RKSEWGWRGCG--GLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALL 59 R+ G RG G G G R A LP P P F R GR E G G A + Sbjct: 324 REKLGGKRGVGRKGQGTRLGAPHSLPPP--PPF-------RTGRGEGGGG---GSRADVT 371 Query: 60 AGRLRP-RRRWAPGAGPVAACRPRAAA 85 AGR RP RRRW P + RP A A Sbjct: 372 AGRARPRRRRWEPLRAQRSGARPGAPA 398 >gi|239749310 PREDICTED: hypothetical protein XP_002346992 [Homo sapiens] Length = 95 Score = 37.4 bits (85), Expect = 0.010 Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Query: 38 RVRRGRREAQGARWPGGGAALLAG------RLRPRRRWAPGAGPVAACRPRAAA---AGG 88 R RR RR+AQG R GGG AG + RP PG G A PRAA+ G Sbjct: 25 RERRTRRDAQGPR--GGGPGFRAGGRRTPDKGRPGSPGVPGGGGAEAWGPRAASRTRLAG 82 Query: 89 PTDGKG 94 DG+G Sbjct: 83 SRDGEG 88 >gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo sapiens] Length = 492 Score = 37.4 bits (85), Expect = 0.010 Identities = 35/87 (40%), Positives = 38/87 (43%), Gaps = 15/87 (17%) Query: 2 RKSEWGWRGCG--GLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALL 59 R+ G RG G G G R A LP P P F R GR E G G A + Sbjct: 324 REKLGGKRGVGRKGQGTRLGAPHSLPPP--PPF-------RTGRGEGGGG---GSRADVT 371 Query: 60 AGRLRP-RRRWAPGAGPVAACRPRAAA 85 AGR RP RRRW P + RP A A Sbjct: 372 AGRARPRRRRWEPLRAQRSGARPGAPA 398 >gi|239743404 PREDICTED: hypothetical protein XP_002342840 [Homo sapiens] Length = 95 Score = 37.4 bits (85), Expect = 0.010 Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Query: 38 RVRRGRREAQGARWPGGGAALLAG------RLRPRRRWAPGAGPVAACRPRAAA---AGG 88 R RR RR+AQG R GGG AG + RP PG G A PRAA+ G Sbjct: 25 RERRTRRDAQGPR--GGGPGFRAGGRRTPDKGRPGSPGVPGGGGAEAWGPRAASRTRLAG 82 Query: 89 PTDGKG 94 DG+G Sbjct: 83 SRDGEG 88 >gi|239509103 PREDICTED: hypothetical protein [Homo sapiens] Length = 95 Score = 37.4 bits (85), Expect = 0.010 Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Query: 38 RVRRGRREAQGARWPGGGAALLAG------RLRPRRRWAPGAGPVAACRPRAAA---AGG 88 R RR RR+AQG R GGG AG + RP PG G A PRAA+ G Sbjct: 25 RERRTRRDAQGPR--GGGPGFRAGGRRTPDKGRPGSPGVPGGGGAEAWGPRAASRTRLAG 82 Query: 89 PTDGKG 94 DG+G Sbjct: 83 SRDGEG 88 >gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatase/phosphodiesterase 5 [Homo sapiens] Length = 542 Score = 37.0 bits (84), Expect = 0.013 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Query: 155 GREVGSLPGVGEARTSRGAVRPRPGLAARLGSRPSGPLRGAGRGARVRRPG--RRGPCGA 212 G +PG+ R +R PRP AR+ PS P G G R+ RPG R CGA Sbjct: 476 GAPATCVPGLSPVRAARPG--PRPWGLARVARTPSAPRAGGGSWGRLHRPGGQTRVRCGA 533 >gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatase/phosphodiesterase 5 [Homo sapiens] Length = 542 Score = 37.0 bits (84), Expect = 0.013 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Query: 155 GREVGSLPGVGEARTSRGAVRPRPGLAARLGSRPSGPLRGAGRGARVRRPG--RRGPCGA 212 G +PG+ R +R PRP AR+ PS P G G R+ RPG R CGA Sbjct: 476 GAPATCVPGLSPVRAARPG--PRPWGLARVARTPSAPRAGGGSWGRLHRPGGQTRVRCGA 533 >gi|126352700 elastin isoform b precursor [Homo sapiens] Length = 677 Score = 36.2 bits (82), Expect = 0.022 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 155 GREVGSLPGVGEARTSRGAVRPRPGLAARLGSRPSGPLRGAGRGARVRRPGRRGP 209 G +G +PGVG S GAV P+PG + G P L G G + PG R P Sbjct: 99 GAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVL--PGARFP 151 Score = 33.5 bits (75), Expect = 0.14 Identities = 34/94 (36%), Positives = 38/94 (40%), Gaps = 14/94 (14%) Query: 7 GWRGCGGLGGRTWATRPLPGP-----HSPEFGLPGWRVRRGRREAQGARWPGGG---AAL 58 G G GGLG A P PG P GLPG V G GAR+PG G Sbjct: 104 GVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPG--VYPG-GVLPGARFPGVGVLPGVP 160 Query: 59 LAGRLRPRRRWAPGAGPVAACRPRAAAAGGPTDG 92 ++P+ APG G A P GGP G Sbjct: 161 TGAGVKPK---APGVGGAFAGIPGVGPFGGPQPG 191 >gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] Length = 445 Score = 36.2 bits (82), Expect = 0.022 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 9/71 (12%) Query: 151 RTQRGREVGSLPGVGEARTSRGAVRPRP-GLAARLGSRPSGPLRGAGRGARVRR-----P 204 RT+ GRE ++ G G++RP G AR G G ++GA G R+R P Sbjct: 134 RTRPGREDAAVRGRNRDPAEPGSLRPTSLGFPARAGQ---GQVQGAAPGRRLRGEPKTPP 190 Query: 205 GRRGPCGALAS 215 GR GP G + S Sbjct: 191 GRSGPSGGVRS 201 >gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] Length = 255 Score = 36.2 bits (82), Expect = 0.022 Identities = 64/227 (28%), Positives = 76/227 (33%), Gaps = 58/227 (25%) Query: 35 PGWRVRRGRREAQGARWPGGGAALLAGRLRPRRRWA----------------------PG 72 P R RG R G GGG A + R R WA PG Sbjct: 30 PAARSPRGPRAGGGGGDAGGGGAPVR-RARGGGCWARAYQDARCFGRGEGGDLQVSSGPG 88 Query: 73 AGPVAACRPRAAAAGGPTD-GKGRGSCQRVAGP-----------LRWRNLLFLPRLAGAL 120 A P A R A +A G D G G R+ P LR R+ LP A L Sbjct: 89 AAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALP--APRL 146 Query: 121 LSLSVSLTLSLPGWKFP----------------LTSREHTDR-RTHARTQRGREVG---- 159 S S PG + P L +R+ R+ + GR+ Sbjct: 147 CPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACA 206 Query: 160 SLPGVGEARTSRGAVRPRPGLAARLGSRPSGPLRGAGRGARVRRPGR 206 LP +R +R R G R RP GP R RGAR RP R Sbjct: 207 QLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRR 253 >gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] Length = 460 Score = 36.2 bits (82), Expect = 0.022 Identities = 37/114 (32%), Positives = 42/114 (36%), Gaps = 25/114 (21%) Query: 12 GGLGGR----------TWATRPLPGPHSPEFGLPGWRVR---RGRREAQG------ARWP 52 G GGR T A P PGP +P P + R RGR E++G A P Sbjct: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLP 247 Query: 53 GGGAALLAGRLRPRRRWAPGAGPVAACRPR------AAAAGGPTDGKGRGSCQR 100 G A P R G A RPR A +G T G RG C R Sbjct: 248 LPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDR 301 >gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo sapiens] Length = 255 Score = 36.2 bits (82), Expect = 0.022 Identities = 64/227 (28%), Positives = 76/227 (33%), Gaps = 58/227 (25%) Query: 35 PGWRVRRGRREAQGARWPGGGAALLAGRLRPRRRWA----------------------PG 72 P R RG R G GGG A + R R WA PG Sbjct: 30 PAARSPRGPRAGGGGGDAGGGGAPVR-RARGGGCWARAYQDARCFGRGEGGDLQVSSGPG 88 Query: 73 AGPVAACRPRAAAAGGPTD-GKGRGSCQRVAGP-----------LRWRNLLFLPRLAGAL 120 A P A R A +A G D G G R+ P LR R+ LP A L Sbjct: 89 AAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALP--APRL 146 Query: 121 LSLSVSLTLSLPGWKFP----------------LTSREHTDR-RTHARTQRGREVG---- 159 S S PG + P L +R+ R+ + GR+ Sbjct: 147 CPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACA 206 Query: 160 SLPGVGEARTSRGAVRPRPGLAARLGSRPSGPLRGAGRGARVRRPGR 206 LP +R +R R G R RP GP R RGAR RP R Sbjct: 207 QLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRR 253 >gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] Length = 460 Score = 36.2 bits (82), Expect = 0.022 Identities = 37/114 (32%), Positives = 42/114 (36%), Gaps = 25/114 (21%) Query: 12 GGLGGR----------TWATRPLPGPHSPEFGLPGWRVR---RGRREAQG------ARWP 52 G GGR T A P PGP +P P + R RGR E++G A P Sbjct: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLP 247 Query: 53 GGGAALLAGRLRPRRRWAPGAGPVAACRPR------AAAAGGPTDGKGRGSCQR 100 G A P R G A RPR A +G T G RG C R Sbjct: 248 LPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDR 301 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.140 0.473 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,087,826 Number of Sequences: 37866 Number of extensions: 663707 Number of successful extensions: 4177 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 375 Number of HSP's that attempted gapping in prelim test: 3528 Number of HSP's gapped (non-prelim): 955 length of query: 215 length of database: 18,247,518 effective HSP length: 98 effective length of query: 117 effective length of database: 14,536,650 effective search space: 1700788050 effective search space used: 1700788050 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.