Guide to the Human Genome
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Search of human proteins with 239748261

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748261 PREDICTED: hypothetical protein [Homo sapiens]
         (167 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753715 PREDICTED: hypothetical protein [Homo sapiens]           349   5e-97
gi|239748261 PREDICTED: hypothetical protein [Homo sapiens]           349   5e-97
gi|239742162 PREDICTED: hypothetical protein [Homo sapiens]           349   5e-97
gi|239744421 PREDICTED: hypothetical protein [Homo sapiens]            40   0.001
gi|110815800 WD repeat domain 32 [Homo sapiens]                        38   0.005
gi|116235480 leucine zipper transcription regulator 2 [Homo sapi...    37   0.006
gi|44662807 hypothetical protein LOC388407 [Homo sapiens]              37   0.008
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]            34   0.051
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]            34   0.051
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]            34   0.051
gi|223468693 hypothetical protein LOC100130361 [Homo sapiens]          34   0.067
gi|223468690 hypothetical protein LOC100132994 [Homo sapiens]          34   0.067
gi|169215981 PREDICTED: hypothetical protein [Homo sapiens]            34   0.067
gi|169215786 PREDICTED: hypothetical protein [Homo sapiens]            34   0.067
gi|169215573 PREDICTED: hypothetical protein [Homo sapiens]            34   0.067
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    33   0.11 
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    33   0.11 
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    33   0.11 
gi|154759255 collagen, type XXVIII precursor [Homo sapiens]            33   0.11 
gi|59806361 hypothetical protein LOC387104 [Homo sapiens]              33   0.15 
gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a...    32   0.19 
gi|46409434 hypothetical protein LOC388759 [Homo sapiens]              32   0.25 
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ...    32   0.33 
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]      32   0.33 
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ...    32   0.33 
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]                32   0.33 
gi|211971095 zygote arrest 1-like [Homo sapiens]                       31   0.43 
gi|169168341 PREDICTED: hypothetical protein [Homo sapiens]            31   0.43 

>gi|239753715 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 167

 Score =  349 bits (896), Expect = 5e-97
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60
           MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL
Sbjct: 1   MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60

Query: 61  SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120
           SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG
Sbjct: 61  SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120

Query: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167
           QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD
Sbjct: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167


>gi|239748261 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 167

 Score =  349 bits (896), Expect = 5e-97
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60
           MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL
Sbjct: 1   MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60

Query: 61  SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120
           SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG
Sbjct: 61  SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120

Query: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167
           QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD
Sbjct: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167


>gi|239742162 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 167

 Score =  349 bits (896), Expect = 5e-97
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60
           MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL
Sbjct: 1   MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60

Query: 61  SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120
           SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG
Sbjct: 61  SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120

Query: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167
           QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD
Sbjct: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167


>gi|239744421 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 252

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 37/129 (28%), Positives = 45/129 (34%), Gaps = 1/129 (0%)

Query: 33  FGEGLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLG 92
           F  G     G G   +  A +  G     G     L SVP   L   G   G        
Sbjct: 13  FPPGAVSSDGLGAVETRPAQREAGGGPGPGDQPLLLCSVPRRSLGVRGARGGARAVSAGN 72

Query: 93  VPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGAFLSL 152
             GVG  AR+ +      G  G+  S G        R R C  G   G  P  +G+ L  
Sbjct: 73  PRGVGRSARDPQTK-KPRGRSGAAVSEGSQVWLQHARLRSCLWGGERGQSPPELGSDLGP 131

Query: 153 HSRRRPPQI 161
            SRRRPP +
Sbjct: 132 QSRRRPPGV 140


>gi|110815800 WD repeat domain 32 [Homo sapiens]
          Length = 559

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 34/92 (36%), Positives = 37/92 (40%), Gaps = 14/92 (15%)

Query: 45  GRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERR 104
           G  S S + R G   L G      AS P    PSP       PSPP   PG   RA+ R 
Sbjct: 58  GAPSLSPAPRSGELGLPGAPESSTASAPGE--PSP-------PSPPCRRPGPDCRAKSRG 108

Query: 105 RLWLDGGEEGSESSPGQAELSMWRRRRECGHG 136
           R  L  G  G    PG A L  W + R  G G
Sbjct: 109 RHGLGAGLGG----PG-ARLFGWLKERSLGRG 135


>gi|116235480 leucine zipper transcription regulator 2 [Homo sapiens]
          Length = 1060

 Score = 37.4 bits (85), Expect = 0.006
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 22   PKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADLSGCSA--WQLASVPATLLPSP 79
            P+ P   +  +F  G   G G G   SG A+   G   LSG  +  ++L S P  LLP P
Sbjct: 962  PESPPLPDVSAFSRGRGGGEGRGSASSGGAAAGAGVGGLSGPESVSFELCSNPGVLLPPP 1021

Query: 80   GLESGDIP 87
             L+ G +P
Sbjct: 1022 ALK-GAVP 1028


>gi|44662807 hypothetical protein LOC388407 [Homo sapiens]
          Length = 251

 Score = 37.0 bits (84), Expect = 0.008
 Identities = 47/170 (27%), Positives = 63/170 (37%), Gaps = 53/170 (31%)

Query: 5   GLALNRKLKLSVGSRVF-------PKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGA 57
           G AL     LS G+ +F         +P P+ P S  +G    R W              
Sbjct: 111 GFALGLPFGLSGGAYLFLLLDGAGDPKPTPEAPISSADG----RAW-------------- 152

Query: 58  ADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSES 117
                 S+WQL  +PA      G  SG   S P   PG+G R          G  +G+  
Sbjct: 153 --FPSESSWQLPQLPA------GSTSG---SEPRARPGLGPRQLPT------GPRDGAAG 195

Query: 118 S-PGQAELSMWRRRRECGHGPREGGH------PNRIGAFLSLHSRRRPPQ 160
             PG+   +   R RE   GPR+ GH        R G+     +R RPP+
Sbjct: 196 QGPGRGLTARLGREREIDCGPRQAGHGGTATDTGRAGS----GARHRPPR 241


>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 34.3 bits (77), Expect = 0.051
 Identities = 39/117 (33%), Positives = 44/117 (37%), Gaps = 8/117 (6%)

Query: 34  GEGLEEGRGWGGRGSG--SASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPL 91
           GEG   G G GG GSG  SA +R GA       A      P   L   G +SG  P  P 
Sbjct: 31  GEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVG-PGGELQGWGRKSGCRPPGPE 89

Query: 92  GVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGA 148
           G  G     R+ RR WL      +         +  RRRR     PR  G     GA
Sbjct: 90  GWAG----GRKLRR-WLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGA 141


>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 34.3 bits (77), Expect = 0.051
 Identities = 39/117 (33%), Positives = 44/117 (37%), Gaps = 8/117 (6%)

Query: 34  GEGLEEGRGWGGRGSG--SASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPL 91
           GEG   G G GG GSG  SA +R GA       A      P   L   G +SG  P  P 
Sbjct: 31  GEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVG-PGGELQGWGRKSGCRPPGPE 89

Query: 92  GVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGA 148
           G  G     R+ RR WL      +         +  RRRR     PR  G     GA
Sbjct: 90  GWAG----GRKLRR-WLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGA 141


>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 34.3 bits (77), Expect = 0.051
 Identities = 39/117 (33%), Positives = 44/117 (37%), Gaps = 8/117 (6%)

Query: 34  GEGLEEGRGWGGRGSG--SASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPL 91
           GEG   G G GG GSG  SA +R GA       A      P   L   G +SG  P  P 
Sbjct: 31  GEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVG-PGGELQGWGRKSGCRPPGPE 89

Query: 92  GVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGA 148
           G  G     R+ RR WL      +         +  RRRR     PR  G     GA
Sbjct: 90  GWAG----GRKLRR-WLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGA 141


>gi|223468693 hypothetical protein LOC100130361 [Homo sapiens]
          Length = 514

 Score = 33.9 bits (76), Expect = 0.067
 Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 25/130 (19%)

Query: 29  EPFSF---GEGLEEGRG--WG--GRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGL 81
           E FSF    E +E+GR   WG  GR       +    D S    + LA  PA ++P P +
Sbjct: 59  EGFSFESESELIEQGRVVLWGREGRPGTPVDDQGDVVDYS----FYLADEPAAIVPPPSV 114

Query: 82  ESGDIPSPPLGVPGVGARARERRRLWLD-----GGEEGSESSPGQAELSMWRRRRECGHG 136
           +    P         GA A      W D      G +    SPG+ + +   R   CG G
Sbjct: 115 QGHPFPE--------GAAAEGSAENWADAEVGPSGRDVLGHSPGKWQQASAGRLHLCGPG 166

Query: 137 P-REGGHPNR 145
           P R   +P R
Sbjct: 167 PVRAWKNPER 176


>gi|223468690 hypothetical protein LOC100132994 [Homo sapiens]
          Length = 514

 Score = 33.9 bits (76), Expect = 0.067
 Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 25/130 (19%)

Query: 29  EPFSF---GEGLEEGRG--WG--GRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGL 81
           E FSF    E +E+GR   WG  GR       +    D S    + LA  PA ++P P +
Sbjct: 59  EGFSFESESELIEQGRVVLWGREGRPGTPVDDQGDVVDYS----FYLADEPAAIVPPPSV 114

Query: 82  ESGDIPSPPLGVPGVGARARERRRLWLD-----GGEEGSESSPGQAELSMWRRRRECGHG 136
           +    P         GA A      W D      G +    SPG+ + +   R   CG G
Sbjct: 115 QGHPFPE--------GAAAEGSAENWADAEVGPSGRDVLGHSPGKWQQASAGRLHLCGPG 166

Query: 137 P-REGGHPNR 145
           P R   +P R
Sbjct: 167 PVRAWKNPER 176


>gi|169215981 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 299

 Score = 33.9 bits (76), Expect = 0.067
 Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)

Query: 30  PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73
           P   GEG     EE   W  RG GS  + PG                  C  WQ +  P 
Sbjct: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185

Query: 74  TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133
            L PSPG+    +P PP     +    R   R W  G   G         + + ++R  C
Sbjct: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241

Query: 134 G-----------HGPREGGHPNRIGAFLSL 152
           G           HGPR     NR+   LSL
Sbjct: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271


>gi|169215786 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 299

 Score = 33.9 bits (76), Expect = 0.067
 Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)

Query: 30  PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73
           P   GEG     EE   W  RG GS  + PG                  C  WQ +  P 
Sbjct: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185

Query: 74  TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133
            L PSPG+    +P PP     +    R   R W  G   G         + + ++R  C
Sbjct: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241

Query: 134 G-----------HGPREGGHPNRIGAFLSL 152
           G           HGPR     NR+   LSL
Sbjct: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271


>gi|169215573 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 299

 Score = 33.9 bits (76), Expect = 0.067
 Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)

Query: 30  PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73
           P   GEG     EE   W  RG GS  + PG                  C  WQ +  P 
Sbjct: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185

Query: 74  TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133
            L PSPG+    +P PP     +    R   R W  G   G         + + ++R  C
Sbjct: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241

Query: 134 G-----------HGPREGGHPNRIGAFLSL 152
           G           HGPR     NR+   LSL
Sbjct: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 15/128 (11%)

Query: 38  EEGRGW-GGRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGV 96
           EE RG+  G   G+A+  P  A+L+ C     +  PA  L   G     +P PP   PG 
Sbjct: 640 EELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG- 698

Query: 97  GARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRR 156
              A     ++   G E +  +PG  +            GP  G    +  A     +  
Sbjct: 699 --SADGLCTIYETEGPESATPAPGALD-----------PGPSPGTSGGKAAAGAGAGASS 745

Query: 157 RPPQIARL 164
           R P+ ARL
Sbjct: 746 RSPKQARL 753



 Score = 28.5 bits (62), Expect = 2.8
 Identities = 39/149 (26%), Positives = 52/149 (34%), Gaps = 31/149 (20%)

Query: 46  RGSGSASQRPGA---ADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARE 102
           R +G++S+ P +   A   G  A    +     + SPG  SG     PLG  G+   A E
Sbjct: 81  RSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEE 140

Query: 103 ------------RRRLWLDGGEEGSESSPGQAELSMWRRRRECG--------------HG 136
                       R  L      + S  +PG    +M RR R  G                
Sbjct: 141 TVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRP 200

Query: 137 PREGGHPNRIGAFLSLHSRRRPPQIARLR 165
           P EG  P +  +  S HS   P   AR R
Sbjct: 201 PTEG--PRKSVSSASEHSTTEPSPAARRR 227


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
          Length = 1124

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 15/128 (11%)

Query: 38   EEGRGW-GGRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGV 96
            EE RG+  G   G+A+  P  A+L+ C     +  PA  L   G     +P PP   PG 
Sbjct: 909  EELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG- 967

Query: 97   GARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRR 156
               A     ++   G E +  +PG  +            GP  G    +  A     +  
Sbjct: 968  --SADGLCTIYETEGPESATPAPGALD-----------PGPSPGTSGGKAAAGAGAGASS 1014

Query: 157  RPPQIARL 164
            R P+ ARL
Sbjct: 1015 RSPKQARL 1022



 Score = 28.5 bits (62), Expect = 2.8
 Identities = 39/149 (26%), Positives = 52/149 (34%), Gaps = 31/149 (20%)

Query: 46  RGSGSASQRPGA---ADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARE 102
           R +G++S+ P +   A   G  A    +     + SPG  SG     PLG  G+   A E
Sbjct: 81  RSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEE 140

Query: 103 ------------RRRLWLDGGEEGSESSPGQAELSMWRRRRECG--------------HG 136
                       R  L      + S  +PG    +M RR R  G                
Sbjct: 141 TVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRP 200

Query: 137 PREGGHPNRIGAFLSLHSRRRPPQIARLR 165
           P EG  P +  +  S HS   P   AR R
Sbjct: 201 PTEG--PRKSVSSASEHSTTEPSPAARRR 227


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 15/128 (11%)

Query: 38  EEGRGW-GGRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGV 96
           EE RG+  G   G+A+  P  A+L+ C     +  PA  L   G     +P PP   PG 
Sbjct: 601 EELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG- 659

Query: 97  GARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRR 156
              A     ++   G E +  +PG  +            GP  G    +  A     +  
Sbjct: 660 --SADGLCTIYETEGPESATPAPGALD-----------PGPSPGTSGGKAAAGAGAGASS 706

Query: 157 RPPQIARL 164
           R P+ ARL
Sbjct: 707 RSPKQARL 714



 Score = 26.9 bits (58), Expect = 8.1
 Identities = 32/114 (28%), Positives = 38/114 (33%), Gaps = 28/114 (24%)

Query: 78  SPGLESGDIPSPPLGVPGVGARARE------------RRRLWLDGGEEGSESSPGQAELS 125
           SPG  SG     PLG  G+   A E            R  L      + S  +PG    +
Sbjct: 107 SPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA 166

Query: 126 MWRRRRECG--------------HGPREGGHPNRIGAFLSLHSRRRPPQIARLR 165
           M RR R  G                P EG  P +  +  S HS   P   AR R
Sbjct: 167 MARRSRAAGTEVGLPRPAPSARPRPPTEG--PRKSVSSASEHSTTEPSPAARRR 218


>gi|154759255 collagen, type XXVIII precursor [Homo sapiens]
          Length = 1125

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 16/85 (18%)

Query: 22  PKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGL 81
           P +P P+ P    EG+   RG  G G        G+   +G    Q  S+          
Sbjct: 385 PGQPGPRGP----EGVPGERGLPGEGFPGPKGEKGSEGPTGPQGLQGLSIKG-------- 432

Query: 82  ESGDI----PSPPLGVPGVGARARE 102
           E GDI    P  P+G+PG+G++  +
Sbjct: 433 EKGDIGPVGPQGPMGIPGIGSQGEQ 457


>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
          Length = 947

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 37/133 (27%), Positives = 45/133 (33%), Gaps = 35/133 (26%)

Query: 17  GSRVFPKRPRPKE----PFSFGEGLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLASVP 72
           G R  P    P+E    P   GE    G G GG G G  +         G S  +    P
Sbjct: 137 GRRPGPPEEPPRELESVPSKLGEPPPLGEGGGGGGEGGGA--------GGGSGEREGGAP 188

Query: 73  ATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRR--- 129
                         P PP G  G G RA++R      GG  G  +SP  +  S  +    
Sbjct: 189 Q-------------PPPPRGWRGKGVRAQQR------GGSGGEGASPSPSSSSAGKTPGT 229

Query: 130 -RRECGHGPREGG 141
             R  G G   GG
Sbjct: 230 GSRNSGSGVAGGG 242


>gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a
           [Homo sapiens]
          Length = 410

 Score = 32.3 bits (72), Expect = 0.19
 Identities = 39/134 (29%), Positives = 54/134 (40%), Gaps = 22/134 (16%)

Query: 25  PRPKEPFSFGEGLEEGRGWGGRG--SGSASQRPGAADLSGC-------SAWQLASV-PAT 74
           P P EP +   GL    GWGGRG      S  P    LS C        A + A++ P  
Sbjct: 201 PEPSEPLAGAGGL----GWGGRGYEDYRRSGPPAPLALSTCVVRFAKTGALRGAALGPPA 256

Query: 75  LLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECG 134
            LP+P  E+     P    PG G  +   +        E  E++      +++RRR + G
Sbjct: 257 ALPAPLTEAAPPAPPARPPPGPGPSSAPAK-----ASPEAEEAARCVHCRALFRRRAD-G 310

Query: 135 HGPR--EGGHPNRI 146
            G R  E   P R+
Sbjct: 311 RGGRCAEAPDPGRL 324


>gi|46409434 hypothetical protein LOC388759 [Homo sapiens]
          Length = 237

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 44/136 (32%), Positives = 50/136 (36%), Gaps = 26/136 (19%)

Query: 45  GRGS-GSASQRPGAADLSGCSAWQLASVPATL------------LPSPG-LESGDIPSPP 90
           GRG  G     P AA  SG    + AS   +L             PSP    +G  PSP 
Sbjct: 90  GRGCRGHFRSLPAAASRSGSRTLRCASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPG 149

Query: 91  LGVPGVGARARERRRLW-LDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGAF 149
              P   A  R  R  + L GG   S+  PGQA +           GP  GG     GA 
Sbjct: 150 SLGPSAPAAPRTARGAYELQGG--ASQDGPGQAAVGATPTT-----GPGTGGE----GAL 198

Query: 150 LSLHSRRRPPQIARLR 165
           L   S R PP  A  R
Sbjct: 199 LGCGSGRTPPTSATWR 214


>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
           sapiens]
          Length = 459

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 13/60 (21%)

Query: 21  FPKRPR-PKE-----PFSFGE-----GLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLA 69
           F K+P  P+E     P  FG+     G   GRG  G GS S  +  G+A+L GCS  QLA
Sbjct: 291 FEKQPHSPRERLDPPPAPFGQMILILGFRVGRG--GTGSWSWRRGAGSAELPGCSCAQLA 348


>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
          Length = 1073

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 12/69 (17%)

Query: 55  PGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGV-GARARERRRLWLDGGEE 113
           PGA  ++G      A+ P  +  SPG E    P  P G+PG+ G   +E R      G+ 
Sbjct: 650 PGADGIAG------AAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGR-----DGKP 698

Query: 114 GSESSPGQA 122
           G    PG+A
Sbjct: 699 GPPGEPGKA 707


>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
           sapiens]
          Length = 459

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 13/60 (21%)

Query: 21  FPKRPR-PKE-----PFSFGE-----GLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLA 69
           F K+P  P+E     P  FG+     G   GRG  G GS S  +  G+A+L GCS  QLA
Sbjct: 291 FEKQPHSPRERLDPPPAPFGQMILILGFRVGRG--GTGSWSWRRGAGSAELPGCSCAQLA 348


>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 39/145 (26%), Positives = 51/145 (35%), Gaps = 20/145 (13%)

Query: 36  GLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLASVP-----ATLLP-----SPGLESGD 85
           G  EG   GG G G + +  G    S  S  + +  P     A+L P     +    S  
Sbjct: 612 GRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPT 671

Query: 86  IPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRR-------RRECGHGPR 138
            P+PPL +  V         L LD   +G   S  +     WR        R     GP 
Sbjct: 672 SPAPPLHM--VSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGP- 728

Query: 139 EGGHPNRIGAFLSLHSRRRPPQIAR 163
           E   P   G+FL       PP+ AR
Sbjct: 729 EASSPRARGSFLPKSGGGSPPRPAR 753


>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 39/145 (26%), Positives = 51/145 (35%), Gaps = 20/145 (13%)

Query: 36  GLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLASVP-----ATLLP-----SPGLESGD 85
           G  EG   GG G G + +  G    S  S  + +  P     A+L P     +    S  
Sbjct: 612 GRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPT 671

Query: 86  IPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRR-------RRECGHGPR 138
            P+PPL +  V         L LD   +G   S  +     WR        R     GP 
Sbjct: 672 SPAPPLHM--VSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGP- 728

Query: 139 EGGHPNRIGAFLSLHSRRRPPQIAR 163
           E   P   G+FL       PP+ AR
Sbjct: 729 EASSPRARGSFLPKSGGGSPPRPAR 753


>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
          Length = 1626

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 12/69 (17%)

Query: 55   PGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGV-GARARERRRLWLDGGEE 113
            PGA  ++G      A+ P  +  SPG E    P  P G+PG+ G   +E R      G+ 
Sbjct: 1203 PGADGIAG------AAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGR-----DGKP 1251

Query: 114  GSESSPGQA 122
            G    PG+A
Sbjct: 1252 GPPGEPGKA 1260


>gi|211971095 zygote arrest 1-like [Homo sapiens]
          Length = 321

 Score = 31.2 bits (69), Expect = 0.43
 Identities = 26/73 (35%), Positives = 29/73 (39%), Gaps = 19/73 (26%)

Query: 56  GAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERR---RLWLDGGE 112
           G   LS CS W                 G  P  PL   GV + A  RR   RL  DG E
Sbjct: 108 GPRTLSSCSPWD----------------GRDPQEPLPACGVTSPATGRRGLIRLRRDGDE 151

Query: 113 EGSESSPGQAELS 125
             S++ PG AE S
Sbjct: 152 AESKALPGPAEAS 164


>gi|169168341 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 110

 Score = 31.2 bits (69), Expect = 0.43
 Identities = 33/102 (32%), Positives = 42/102 (41%), Gaps = 11/102 (10%)

Query: 38  EEGRGWGGRGSGSASQRPG-AADLSGCSAWQLASVPATLLPS----PGLESGDIPSPPLG 92
           E GR  G R   SAS  PG  A L G S       P + + +    PGL S   P+P   
Sbjct: 4   ERGRAEGARAPASASGEPGPLASLRGASPSLELGRPRSEVKAPSGPPGLHSRSSPAPSAS 63

Query: 93  VPGVGARARERRRLWLDGGEEGS----ESSPGQAELSM-WRR 129
           V    A  R+ R   L  G   +    E +PG+  L + W R
Sbjct: 64  VE-PQAWVRDERDAALARGRPSAPKTREQAPGEKPLEVSWSR 104


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.138    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,907,811
Number of Sequences: 37866
Number of extensions: 522976
Number of successful extensions: 2946
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 2785
Number of HSP's gapped (non-prelim): 355
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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