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Search of human proteins with 239748261
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748261 PREDICTED: hypothetical protein [Homo sapiens]
(167 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753715 PREDICTED: hypothetical protein [Homo sapiens] 349 5e-97
gi|239748261 PREDICTED: hypothetical protein [Homo sapiens] 349 5e-97
gi|239742162 PREDICTED: hypothetical protein [Homo sapiens] 349 5e-97
gi|239744421 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|110815800 WD repeat domain 32 [Homo sapiens] 38 0.005
gi|116235480 leucine zipper transcription regulator 2 [Homo sapi... 37 0.006
gi|44662807 hypothetical protein LOC388407 [Homo sapiens] 37 0.008
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 34 0.051
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens] 34 0.051
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens] 34 0.051
gi|223468693 hypothetical protein LOC100130361 [Homo sapiens] 34 0.067
gi|223468690 hypothetical protein LOC100132994 [Homo sapiens] 34 0.067
gi|169215981 PREDICTED: hypothetical protein [Homo sapiens] 34 0.067
gi|169215786 PREDICTED: hypothetical protein [Homo sapiens] 34 0.067
gi|169215573 PREDICTED: hypothetical protein [Homo sapiens] 34 0.067
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.11
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.11
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 33 0.11
gi|154759255 collagen, type XXVIII precursor [Homo sapiens] 33 0.11
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 33 0.15
gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a... 32 0.19
gi|46409434 hypothetical protein LOC388759 [Homo sapiens] 32 0.25
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 32 0.33
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 32 0.33
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 32 0.33
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 32 0.33
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 32 0.33
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 32 0.33
gi|211971095 zygote arrest 1-like [Homo sapiens] 31 0.43
gi|169168341 PREDICTED: hypothetical protein [Homo sapiens] 31 0.43
>gi|239753715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 167
Score = 349 bits (896), Expect = 5e-97
Identities = 167/167 (100%), Positives = 167/167 (100%)
Query: 1 MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60
MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL
Sbjct: 1 MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60
Query: 61 SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120
SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG
Sbjct: 61 SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120
Query: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167
QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD
Sbjct: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167
>gi|239748261 PREDICTED: hypothetical protein [Homo sapiens]
Length = 167
Score = 349 bits (896), Expect = 5e-97
Identities = 167/167 (100%), Positives = 167/167 (100%)
Query: 1 MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60
MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL
Sbjct: 1 MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60
Query: 61 SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120
SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG
Sbjct: 61 SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120
Query: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167
QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD
Sbjct: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167
>gi|239742162 PREDICTED: hypothetical protein [Homo sapiens]
Length = 167
Score = 349 bits (896), Expect = 5e-97
Identities = 167/167 (100%), Positives = 167/167 (100%)
Query: 1 MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60
MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL
Sbjct: 1 MTCVGLALNRKLKLSVGSRVFPKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADL 60
Query: 61 SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120
SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG
Sbjct: 61 SGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPG 120
Query: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167
QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD
Sbjct: 121 QAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRRRPPQIARLRYD 167
>gi|239744421 PREDICTED: hypothetical protein [Homo sapiens]
Length = 252
Score = 40.0 bits (92), Expect = 0.001
Identities = 37/129 (28%), Positives = 45/129 (34%), Gaps = 1/129 (0%)
Query: 33 FGEGLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLG 92
F G G G + A + G G L SVP L G G
Sbjct: 13 FPPGAVSSDGLGAVETRPAQREAGGGPGPGDQPLLLCSVPRRSLGVRGARGGARAVSAGN 72
Query: 93 VPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGAFLSL 152
GVG AR+ + G G+ S G R R C G G P +G+ L
Sbjct: 73 PRGVGRSARDPQTK-KPRGRSGAAVSEGSQVWLQHARLRSCLWGGERGQSPPELGSDLGP 131
Query: 153 HSRRRPPQI 161
SRRRPP +
Sbjct: 132 QSRRRPPGV 140
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 37.7 bits (86), Expect = 0.005
Identities = 34/92 (36%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 45 GRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERR 104
G S S + R G L G AS P PSP PSPP PG RA+ R
Sbjct: 58 GAPSLSPAPRSGELGLPGAPESSTASAPGE--PSP-------PSPPCRRPGPDCRAKSRG 108
Query: 105 RLWLDGGEEGSESSPGQAELSMWRRRRECGHG 136
R L G G PG A L W + R G G
Sbjct: 109 RHGLGAGLGG----PG-ARLFGWLKERSLGRG 135
>gi|116235480 leucine zipper transcription regulator 2 [Homo sapiens]
Length = 1060
Score = 37.4 bits (85), Expect = 0.006
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 22 PKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADLSGCSA--WQLASVPATLLPSP 79
P+ P + +F G G G G SG A+ G LSG + ++L S P LLP P
Sbjct: 962 PESPPLPDVSAFSRGRGGGEGRGSASSGGAAAGAGVGGLSGPESVSFELCSNPGVLLPPP 1021
Query: 80 GLESGDIP 87
L+ G +P
Sbjct: 1022 ALK-GAVP 1028
>gi|44662807 hypothetical protein LOC388407 [Homo sapiens]
Length = 251
Score = 37.0 bits (84), Expect = 0.008
Identities = 47/170 (27%), Positives = 63/170 (37%), Gaps = 53/170 (31%)
Query: 5 GLALNRKLKLSVGSRVF-------PKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGA 57
G AL LS G+ +F +P P+ P S +G R W
Sbjct: 111 GFALGLPFGLSGGAYLFLLLDGAGDPKPTPEAPISSADG----RAW-------------- 152
Query: 58 ADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSES 117
S+WQL +PA G SG S P PG+G R G +G+
Sbjct: 153 --FPSESSWQLPQLPA------GSTSG---SEPRARPGLGPRQLPT------GPRDGAAG 195
Query: 118 S-PGQAELSMWRRRRECGHGPREGGH------PNRIGAFLSLHSRRRPPQ 160
PG+ + R RE GPR+ GH R G+ +R RPP+
Sbjct: 196 QGPGRGLTARLGREREIDCGPRQAGHGGTATDTGRAGS----GARHRPPR 241
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 34.3 bits (77), Expect = 0.051
Identities = 39/117 (33%), Positives = 44/117 (37%), Gaps = 8/117 (6%)
Query: 34 GEGLEEGRGWGGRGSG--SASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPL 91
GEG G G GG GSG SA +R GA A P L G +SG P P
Sbjct: 31 GEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVG-PGGELQGWGRKSGCRPPGPE 89
Query: 92 GVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGA 148
G G R+ RR WL + + RRRR PR G GA
Sbjct: 90 GWAG----GRKLRR-WLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGA 141
>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 34.3 bits (77), Expect = 0.051
Identities = 39/117 (33%), Positives = 44/117 (37%), Gaps = 8/117 (6%)
Query: 34 GEGLEEGRGWGGRGSG--SASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPL 91
GEG G G GG GSG SA +R GA A P L G +SG P P
Sbjct: 31 GEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVG-PGGELQGWGRKSGCRPPGPE 89
Query: 92 GVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGA 148
G G R+ RR WL + + RRRR PR G GA
Sbjct: 90 GWAG----GRKLRR-WLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGA 141
>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 34.3 bits (77), Expect = 0.051
Identities = 39/117 (33%), Positives = 44/117 (37%), Gaps = 8/117 (6%)
Query: 34 GEGLEEGRGWGGRGSG--SASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPL 91
GEG G G GG GSG SA +R GA A P L G +SG P P
Sbjct: 31 GEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVG-PGGELQGWGRKSGCRPPGPE 89
Query: 92 GVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGA 148
G G R+ RR WL + + RRRR PR G GA
Sbjct: 90 GWAG----GRKLRR-WLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGA 141
>gi|223468693 hypothetical protein LOC100130361 [Homo sapiens]
Length = 514
Score = 33.9 bits (76), Expect = 0.067
Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 25/130 (19%)
Query: 29 EPFSF---GEGLEEGRG--WG--GRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGL 81
E FSF E +E+GR WG GR + D S + LA PA ++P P +
Sbjct: 59 EGFSFESESELIEQGRVVLWGREGRPGTPVDDQGDVVDYS----FYLADEPAAIVPPPSV 114
Query: 82 ESGDIPSPPLGVPGVGARARERRRLWLD-----GGEEGSESSPGQAELSMWRRRRECGHG 136
+ P GA A W D G + SPG+ + + R CG G
Sbjct: 115 QGHPFPE--------GAAAEGSAENWADAEVGPSGRDVLGHSPGKWQQASAGRLHLCGPG 166
Query: 137 P-REGGHPNR 145
P R +P R
Sbjct: 167 PVRAWKNPER 176
>gi|223468690 hypothetical protein LOC100132994 [Homo sapiens]
Length = 514
Score = 33.9 bits (76), Expect = 0.067
Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 25/130 (19%)
Query: 29 EPFSF---GEGLEEGRG--WG--GRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGL 81
E FSF E +E+GR WG GR + D S + LA PA ++P P +
Sbjct: 59 EGFSFESESELIEQGRVVLWGREGRPGTPVDDQGDVVDYS----FYLADEPAAIVPPPSV 114
Query: 82 ESGDIPSPPLGVPGVGARARERRRLWLD-----GGEEGSESSPGQAELSMWRRRRECGHG 136
+ P GA A W D G + SPG+ + + R CG G
Sbjct: 115 QGHPFPE--------GAAAEGSAENWADAEVGPSGRDVLGHSPGKWQQASAGRLHLCGPG 166
Query: 137 P-REGGHPNR 145
P R +P R
Sbjct: 167 PVRAWKNPER 176
>gi|169215981 PREDICTED: hypothetical protein [Homo sapiens]
Length = 299
Score = 33.9 bits (76), Expect = 0.067
Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)
Query: 30 PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73
P GEG EE W RG GS + PG C WQ + P
Sbjct: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185
Query: 74 TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133
L PSPG+ +P PP + R R W G G + + ++R C
Sbjct: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241
Query: 134 G-----------HGPREGGHPNRIGAFLSL 152
G HGPR NR+ LSL
Sbjct: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271
>gi|169215786 PREDICTED: hypothetical protein [Homo sapiens]
Length = 299
Score = 33.9 bits (76), Expect = 0.067
Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)
Query: 30 PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73
P GEG EE W RG GS + PG C WQ + P
Sbjct: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185
Query: 74 TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133
L PSPG+ +P PP + R R W G G + + ++R C
Sbjct: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241
Query: 134 G-----------HGPREGGHPNRIGAFLSL 152
G HGPR NR+ LSL
Sbjct: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271
>gi|169215573 PREDICTED: hypothetical protein [Homo sapiens]
Length = 299
Score = 33.9 bits (76), Expect = 0.067
Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)
Query: 30 PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73
P GEG EE W RG GS + PG C WQ + P
Sbjct: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185
Query: 74 TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133
L PSPG+ +P PP + R R W G G + + ++R C
Sbjct: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241
Query: 134 G-----------HGPREGGHPNRIGAFLSL 152
G HGPR NR+ LSL
Sbjct: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 33.1 bits (74), Expect = 0.11
Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 15/128 (11%)
Query: 38 EEGRGW-GGRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGV 96
EE RG+ G G+A+ P A+L+ C + PA L G +P PP PG
Sbjct: 640 EELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG- 698
Query: 97 GARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRR 156
A ++ G E + +PG + GP G + A +
Sbjct: 699 --SADGLCTIYETEGPESATPAPGALD-----------PGPSPGTSGGKAAAGAGAGASS 745
Query: 157 RPPQIARL 164
R P+ ARL
Sbjct: 746 RSPKQARL 753
Score = 28.5 bits (62), Expect = 2.8
Identities = 39/149 (26%), Positives = 52/149 (34%), Gaps = 31/149 (20%)
Query: 46 RGSGSASQRPGA---ADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARE 102
R +G++S+ P + A G A + + SPG SG PLG G+ A E
Sbjct: 81 RSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEE 140
Query: 103 ------------RRRLWLDGGEEGSESSPGQAELSMWRRRRECG--------------HG 136
R L + S +PG +M RR R G
Sbjct: 141 TVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRP 200
Query: 137 PREGGHPNRIGAFLSLHSRRRPPQIARLR 165
P EG P + + S HS P AR R
Sbjct: 201 PTEG--PRKSVSSASEHSTTEPSPAARRR 227
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 33.1 bits (74), Expect = 0.11
Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 15/128 (11%)
Query: 38 EEGRGW-GGRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGV 96
EE RG+ G G+A+ P A+L+ C + PA L G +P PP PG
Sbjct: 909 EELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG- 967
Query: 97 GARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRR 156
A ++ G E + +PG + GP G + A +
Sbjct: 968 --SADGLCTIYETEGPESATPAPGALD-----------PGPSPGTSGGKAAAGAGAGASS 1014
Query: 157 RPPQIARL 164
R P+ ARL
Sbjct: 1015 RSPKQARL 1022
Score = 28.5 bits (62), Expect = 2.8
Identities = 39/149 (26%), Positives = 52/149 (34%), Gaps = 31/149 (20%)
Query: 46 RGSGSASQRPGA---ADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARE 102
R +G++S+ P + A G A + + SPG SG PLG G+ A E
Sbjct: 81 RSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEE 140
Query: 103 ------------RRRLWLDGGEEGSESSPGQAELSMWRRRRECG--------------HG 136
R L + S +PG +M RR R G
Sbjct: 141 TVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRP 200
Query: 137 PREGGHPNRIGAFLSLHSRRRPPQIARLR 165
P EG P + + S HS P AR R
Sbjct: 201 PTEG--PRKSVSSASEHSTTEPSPAARRR 227
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 33.1 bits (74), Expect = 0.11
Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 15/128 (11%)
Query: 38 EEGRGW-GGRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGV 96
EE RG+ G G+A+ P A+L+ C + PA L G +P PP PG
Sbjct: 601 EELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG- 659
Query: 97 GARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGAFLSLHSRR 156
A ++ G E + +PG + GP G + A +
Sbjct: 660 --SADGLCTIYETEGPESATPAPGALD-----------PGPSPGTSGGKAAAGAGAGASS 706
Query: 157 RPPQIARL 164
R P+ ARL
Sbjct: 707 RSPKQARL 714
Score = 26.9 bits (58), Expect = 8.1
Identities = 32/114 (28%), Positives = 38/114 (33%), Gaps = 28/114 (24%)
Query: 78 SPGLESGDIPSPPLGVPGVGARARE------------RRRLWLDGGEEGSESSPGQAELS 125
SPG SG PLG G+ A E R L + S +PG +
Sbjct: 107 SPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA 166
Query: 126 MWRRRRECG--------------HGPREGGHPNRIGAFLSLHSRRRPPQIARLR 165
M RR R G P EG P + + S HS P AR R
Sbjct: 167 MARRSRAAGTEVGLPRPAPSARPRPPTEG--PRKSVSSASEHSTTEPSPAARRR 218
>gi|154759255 collagen, type XXVIII precursor [Homo sapiens]
Length = 1125
Score = 33.1 bits (74), Expect = 0.11
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 16/85 (18%)
Query: 22 PKRPRPKEPFSFGEGLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLASVPATLLPSPGL 81
P +P P+ P EG+ RG G G G+ +G Q S+
Sbjct: 385 PGQPGPRGP----EGVPGERGLPGEGFPGPKGEKGSEGPTGPQGLQGLSIKG-------- 432
Query: 82 ESGDI----PSPPLGVPGVGARARE 102
E GDI P P+G+PG+G++ +
Sbjct: 433 EKGDIGPVGPQGPMGIPGIGSQGEQ 457
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 32.7 bits (73), Expect = 0.15
Identities = 37/133 (27%), Positives = 45/133 (33%), Gaps = 35/133 (26%)
Query: 17 GSRVFPKRPRPKE----PFSFGEGLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLASVP 72
G R P P+E P GE G G GG G G + G S + P
Sbjct: 137 GRRPGPPEEPPRELESVPSKLGEPPPLGEGGGGGGEGGGA--------GGGSGEREGGAP 188
Query: 73 ATLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRR--- 129
P PP G G G RA++R GG G +SP + S +
Sbjct: 189 Q-------------PPPPRGWRGKGVRAQQR------GGSGGEGASPSPSSSSAGKTPGT 229
Query: 130 -RRECGHGPREGG 141
R G G GG
Sbjct: 230 GSRNSGSGVAGGG 242
>gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a
[Homo sapiens]
Length = 410
Score = 32.3 bits (72), Expect = 0.19
Identities = 39/134 (29%), Positives = 54/134 (40%), Gaps = 22/134 (16%)
Query: 25 PRPKEPFSFGEGLEEGRGWGGRG--SGSASQRPGAADLSGC-------SAWQLASV-PAT 74
P P EP + GL GWGGRG S P LS C A + A++ P
Sbjct: 201 PEPSEPLAGAGGL----GWGGRGYEDYRRSGPPAPLALSTCVVRFAKTGALRGAALGPPA 256
Query: 75 LLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRRECG 134
LP+P E+ P PG G + + E E++ +++RRR + G
Sbjct: 257 ALPAPLTEAAPPAPPARPPPGPGPSSAPAK-----ASPEAEEAARCVHCRALFRRRAD-G 310
Query: 135 HGPR--EGGHPNRI 146
G R E P R+
Sbjct: 311 RGGRCAEAPDPGRL 324
>gi|46409434 hypothetical protein LOC388759 [Homo sapiens]
Length = 237
Score = 32.0 bits (71), Expect = 0.25
Identities = 44/136 (32%), Positives = 50/136 (36%), Gaps = 26/136 (19%)
Query: 45 GRGS-GSASQRPGAADLSGCSAWQLASVPATL------------LPSPG-LESGDIPSPP 90
GRG G P AA SG + AS +L PSP +G PSP
Sbjct: 90 GRGCRGHFRSLPAAASRSGSRTLRCASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPG 149
Query: 91 LGVPGVGARARERRRLW-LDGGEEGSESSPGQAELSMWRRRRECGHGPREGGHPNRIGAF 149
P A R R + L GG S+ PGQA + GP GG GA
Sbjct: 150 SLGPSAPAAPRTARGAYELQGG--ASQDGPGQAAVGATPTT-----GPGTGGE----GAL 198
Query: 150 LSLHSRRRPPQIARLR 165
L S R PP A R
Sbjct: 199 LGCGSGRTPPTSATWR 214
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 31.6 bits (70), Expect = 0.33
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 13/60 (21%)
Query: 21 FPKRPR-PKE-----PFSFGE-----GLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLA 69
F K+P P+E P FG+ G GRG G GS S + G+A+L GCS QLA
Sbjct: 291 FEKQPHSPRERLDPPPAPFGQMILILGFRVGRG--GTGSWSWRRGAGSAELPGCSCAQLA 348
>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
Length = 1073
Score = 31.6 bits (70), Expect = 0.33
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 55 PGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGV-GARARERRRLWLDGGEE 113
PGA ++G A+ P + SPG E P P G+PG+ G +E R G+
Sbjct: 650 PGADGIAG------AAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGR-----DGKP 698
Query: 114 GSESSPGQA 122
G PG+A
Sbjct: 699 GPPGEPGKA 707
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 31.6 bits (70), Expect = 0.33
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 13/60 (21%)
Query: 21 FPKRPR-PKE-----PFSFGE-----GLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLA 69
F K+P P+E P FG+ G GRG G GS S + G+A+L GCS QLA
Sbjct: 291 FEKQPHSPRERLDPPPAPFGQMILILGFRVGRG--GTGSWSWRRGAGSAELPGCSCAQLA 348
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 31.6 bits (70), Expect = 0.33
Identities = 39/145 (26%), Positives = 51/145 (35%), Gaps = 20/145 (13%)
Query: 36 GLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLASVP-----ATLLP-----SPGLESGD 85
G EG GG G G + + G S S + + P A+L P + S
Sbjct: 612 GRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPT 671
Query: 86 IPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRR-------RRECGHGPR 138
P+PPL + V L LD +G S + WR R GP
Sbjct: 672 SPAPPLHM--VSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGP- 728
Query: 139 EGGHPNRIGAFLSLHSRRRPPQIAR 163
E P G+FL PP+ AR
Sbjct: 729 EASSPRARGSFLPKSGGGSPPRPAR 753
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 31.6 bits (70), Expect = 0.33
Identities = 39/145 (26%), Positives = 51/145 (35%), Gaps = 20/145 (13%)
Query: 36 GLEEGRGWGGRGSGSASQRPGAADLSGCSAWQLASVP-----ATLLP-----SPGLESGD 85
G EG GG G G + + G S S + + P A+L P + S
Sbjct: 612 GRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPT 671
Query: 86 IPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRR-------RRECGHGPR 138
P+PPL + V L LD +G S + WR R GP
Sbjct: 672 SPAPPLHM--VSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGP- 728
Query: 139 EGGHPNRIGAFLSLHSRRRPPQIAR 163
E P G+FL PP+ AR
Sbjct: 729 EASSPRARGSFLPKSGGGSPPRPAR 753
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 31.6 bits (70), Expect = 0.33
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 55 PGAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGV-GARARERRRLWLDGGEE 113
PGA ++G A+ P + SPG E P P G+PG+ G +E R G+
Sbjct: 1203 PGADGIAG------AAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGR-----DGKP 1251
Query: 114 GSESSPGQA 122
G PG+A
Sbjct: 1252 GPPGEPGKA 1260
>gi|211971095 zygote arrest 1-like [Homo sapiens]
Length = 321
Score = 31.2 bits (69), Expect = 0.43
Identities = 26/73 (35%), Positives = 29/73 (39%), Gaps = 19/73 (26%)
Query: 56 GAADLSGCSAWQLASVPATLLPSPGLESGDIPSPPLGVPGVGARARERR---RLWLDGGE 112
G LS CS W G P PL GV + A RR RL DG E
Sbjct: 108 GPRTLSSCSPWD----------------GRDPQEPLPACGVTSPATGRRGLIRLRRDGDE 151
Query: 113 EGSESSPGQAELS 125
S++ PG AE S
Sbjct: 152 AESKALPGPAEAS 164
>gi|169168341 PREDICTED: hypothetical protein [Homo sapiens]
Length = 110
Score = 31.2 bits (69), Expect = 0.43
Identities = 33/102 (32%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 38 EEGRGWGGRGSGSASQRPG-AADLSGCSAWQLASVPATLLPS----PGLESGDIPSPPLG 92
E GR G R SAS PG A L G S P + + + PGL S P+P
Sbjct: 4 ERGRAEGARAPASASGEPGPLASLRGASPSLELGRPRSEVKAPSGPPGLHSRSSPAPSAS 63
Query: 93 VPGVGARARERRRLWLDGGEEGS----ESSPGQAELSM-WRR 129
V A R+ R L G + E +PG+ L + W R
Sbjct: 64 VE-PQAWVRDERDAALARGRPSAPKTREQAPGEKPLEVSWSR 104
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.138 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,907,811
Number of Sequences: 37866
Number of extensions: 522976
Number of successful extensions: 2946
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 2785
Number of HSP's gapped (non-prelim): 355
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.