Guide to the Human Genome
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Name: FLJ30375 Sequence: fasta or formatted (167aa) NCBI GI: 239742162
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {167aa} PREDICTED: hypothetical protein
alt mRNA {167aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         12           2
 C cysteine            1.8          3           1
 D aspartate           2.4          4           1
 E glutamate           7.2         12           2
 F phenylalanine       2.4          4           1
 G glycine            15.6         26           2
 H histidine           1.8          3           1
 I isoleucine          1.8          3           1
 K lysine              2.4          4           1
 L leucine            10.2         17           2
 M methionine          1.2          2           1
 N asparagine          1.2          2           1
 P proline            10.2         17           2
 Q glutamine           2.4          4           1
 R arginine           13.8         23           4
 S serine             10.8         18           2
 T threonine           1.2          2           1
 V valine              3.6          6           1
 W tryptophan          2.4          4           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
FLJ30375              1.000   PREDICTED: hypothetical protein 
FLJ30375              1.000   PREDICTED: hypothetical protein 
LOC100127946          0.046   PREDICTED: hypothetical protein 
DCAF10                0.040   WD repeat domain 32 
SEC16B                0.037   leucine zipper transcription regulator 2 
C17orf82              0.037   hypothetical protein LOC388407 
LOC339192             0.028   PREDICTED: hypothetical protein 
LOC339192             0.028   PREDICTED: hypothetical protein 
LOC339192             0.028   PREDICTED: hypothetical protein 
CXorf49               0.028   hypothetical protein LOC100130361 
CXorf49B              0.028   hypothetical protein LOC100132994 
LOC100131530          0.028   PREDICTED: hypothetical protein 
LOC100131530          0.028   PREDICTED: hypothetical protein 
LOC100131530          0.028   PREDICTED: hypothetical protein 
FLJ22184              0.025   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.025   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.025   PREDICTED: hypothetical protein LOC80164 
COL28A1               0.025   collagen, type XXVIII precursor 
C6orf174              0.025   hypothetical protein LOC387104 
SPRED3                0.022   sprouty-related, EVH1 domain containing 3 isoform a...
C1orf229              0.022   hypothetical protein LOC388759 
LOC100292122          0.022   PREDICTED: hypothetical protein XP_002345138 
LOC100293055          0.022   PREDICTED: similar to COL22A1 protein 
LOC100286986          0.022   PREDICTED: hypothetical protein XP_002344191 
LOC100133305          0.022   PREDICTED: hypothetical protein 
LOC100133305          0.022   PREDICTED: hypothetical protein 
COL22A1               0.022   collagen, type XXII, alpha 1 
ZAR1L                 0.019   zygote arrest 1-like 
LOC729421             0.019   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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