Search of human proteins with 239748163

Search of human proteins with 239748163

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748163 PREDICTED: similar to mCG127065 [Homo sapiens]
         (171 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239748163 PREDICTED: similar to mCG127065 [Homo sapiens]           366   e-102
gi|239753596 PREDICTED: similar to mCG127065 [Homo sapiens]           363   e-101
gi|169164961 PREDICTED: similar to mCG127065 [Homo sapiens]           363   e-101
gi|40018612 MyoD family inhibitor domain containing protein isof...    67   6e-12
gi|5031905 MyoD family inhibitor [Homo sapiens]                        61   4e-10
gi|239755901 PREDICTED: chromosome 12 open reading frame 64 [Hom...    35   0.032
gi|239750386 PREDICTED: chromosome 12 open reading frame 64 [Hom...    35   0.032
gi|239744688 PREDICTED: hypothetical protein LOC283310 [Homo sap...    35   0.032
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s...    30   0.78 
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa...    30   0.78 
gi|108773804 Fraser syndrome 1 [Homo sapiens]                          30   0.78 
gi|167466169 growth arrest-specific 1 [Homo sapiens]                   30   1.0  
gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]               29   2.3  
gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]                29   2.3  
gi|211971074 A kinase (PRKA) anchor protein 2 isoform 2 [Homo sa...    29   2.3  
gi|51873058 A kinase (PRKA) anchor protein 2 isoform 1 [Homo sap...    29   2.3  
gi|134268640 tectorin alpha precursor [Homo sapiens]                   28   3.0  
gi|123173777 keratin associated protein 5-8 [Homo sapiens]             28   3.0  
gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens]      28   3.9  
gi|18158228 zinc finger protein 280A [Homo sapiens]                    28   3.9  
gi|171916095 SMEK homolog 2, suppressor of mek1 isoform 1 [Homo ...    28   5.0  
gi|190014607 netrin G2 [Homo sapiens]                                  28   5.0  
gi|170932526 nuclear receptor coactivator 7 isoform 2 [Homo sapi...    28   5.0  
gi|170932524 nuclear receptor coactivator 7 isoform 1 [Homo sapi...    28   5.0  
gi|37675283 adaptor-related protein complex 4, epsilon 1 subunit...    28   5.0  
gi|48255941 CD44 antigen isoform 4 precursor [Homo sapiens]            27   6.6  
gi|24041035 notch 2 preproprotein [Homo sapiens]                       27   6.6  
gi|46399200 testis-specific bromodomain protein [Homo sapiens]         27   6.6  
gi|46399198 testis-specific bromodomain protein [Homo sapiens]         27   6.6  
gi|47419936 SFRS protein kinase 1 [Homo sapiens]                       27   6.6  

>gi|239748163 PREDICTED: similar to mCG127065 [Homo sapiens]
          Length = 171

 Score =  366 bits (940), Expect = e-102
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MQSLTAIGIRRHTQLTNAKHADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSL 60
           MQSLTAIGIRRHTQLTNAKHADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSL
Sbjct: 1   MQSLTAIGIRRHTQLTNAKHADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSL 60

Query: 61  SSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFWDCLLMLPGTCETVCTKMCC 120
           SSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFWDCLLMLPGTCETVCTKMCC
Sbjct: 61  SSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFWDCLLMLPGTCETVCTKMCC 120

Query: 121 PSHRYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLELAMEISEICYR 171
           PSHRYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLELAMEISEICYR
Sbjct: 121 PSHRYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLELAMEISEICYR 171


>gi|239753596 PREDICTED: similar to mCG127065 [Homo sapiens]
          Length = 171

 Score =  363 bits (932), Expect = e-101
 Identities = 170/171 (99%), Positives = 170/171 (99%)

Query: 1   MQSLTAIGIRRHTQLTNAKHADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSL 60
           MQSLTAIGIRRHTQLTNAKHADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSL
Sbjct: 1   MQSLTAIGIRRHTQLTNAKHADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSL 60

Query: 61  SSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFWDCLLMLPGTCETVCTKMCC 120
           SSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFWDCLLMLPGTCETVCTKMCC
Sbjct: 61  SSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFWDCLLMLPGTCETVCTKMCC 120

Query: 121 PSHRYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLELAMEISEICYR 171
           PS RYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLELAMEISEICYR
Sbjct: 121 PSRRYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLELAMEISEICYR 171


>gi|169164961 PREDICTED: similar to mCG127065 [Homo sapiens]
          Length = 171

 Score =  363 bits (932), Expect = e-101
 Identities = 170/171 (99%), Positives = 170/171 (99%)

Query: 1   MQSLTAIGIRRHTQLTNAKHADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSL 60
           MQSLTAIGIRRHTQLTNAKHADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSL
Sbjct: 1   MQSLTAIGIRRHTQLTNAKHADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSL 60

Query: 61  SSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFWDCLLMLPGTCETVCTKMCC 120
           SSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFWDCLLMLPGTCETVCTKMCC
Sbjct: 61  SSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFWDCLLMLPGTCETVCTKMCC 120

Query: 121 PSHRYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLELAMEISEICYR 171
           PS RYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLELAMEISEICYR
Sbjct: 121 PSRRYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLELAMEISEICYR 171


>gi|40018612 MyoD family inhibitor domain containing protein isoform
           p40 [Homo sapiens]
          Length = 355

 Score = 67.4 bits (163), Expect = 6e-12
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 7/84 (8%)

Query: 88  CASLILACLFCQFWD-CLLMLPGTCETVCTKMCCPSHRYHHTSDENHSRNDCSCNCDMDC 146
           C   ILACLFC+F   C ++L      +CT   C         D      DC+C CDMDC
Sbjct: 276 CVHCILACLFCEFLTLCNIVLGQASCGICTSEACCCCCGDEMGD------DCNCPCDMDC 329

Query: 147 SLFESCHETSECLELAMEISEICY 170
            + ++C E+S+CLE+ ME   IC+
Sbjct: 330 GIMDACCESSDCLEICMECCGICF 353


>gi|5031905 MyoD family inhibitor [Homo sapiens]
          Length = 246

 Score = 61.2 bits (147), Expect = 4e-10
 Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 12/128 (9%)

Query: 48  PNEKKLSESSTSLSSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFWD-CLLM 106
           P   +  ++  SL+S    ++  S   T + +  +  ++ C   IL+CLFC+F   C ++
Sbjct: 124 PKAHRKLQTHPSLASQGSKKSKSSSKSTTSQIPLQAQEDCCVHCILSCLFCEFLTLCNIV 183

Query: 107 LP----GTCETVCTKMCCPSHRYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLELA 162
           L     G+C +  + +CC        +D       C   CD+DC + ++C E+++CLE+ 
Sbjct: 184 LDCATCGSCSSEDSCLCCCCCGSGECAD-------CDLPCDLDCGILDACCESADCLEIC 236

Query: 163 MEISEICY 170
           ME   +C+
Sbjct: 237 MECCGLCF 244


>gi|239755901 PREDICTED: chromosome 12 open reading frame 64 [Homo
            sapiens]
          Length = 2250

 Score = 35.0 bits (79), Expect = 0.032
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 5/94 (5%)

Query: 59   SLSSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLF---CQFWDCLLMLPGTCETVC 115
            ++   E  Q  F Y + + S+ + D    C ++I    F   C    C   L G CE +C
Sbjct: 1023 TIKPCEAHQNKFPYAKKECSILYSDIFASCRNVIDVTSFAKNCHEDTCNCNLGGDCECLC 1082

Query: 116  TKMCCPSHRYHHTSDENHSRNDCSCNCDMDCSLF 149
            T +   +++        H R+  S  C +DC  +
Sbjct: 1083 TSIAAYAYKCCQEGISIHWRS--STVCSLDCEYY 1114


>gi|239750386 PREDICTED: chromosome 12 open reading frame 64 [Homo
            sapiens]
          Length = 2250

 Score = 35.0 bits (79), Expect = 0.032
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 5/94 (5%)

Query: 59   SLSSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLF---CQFWDCLLMLPGTCETVC 115
            ++   E  Q  F Y + + S+ + D    C ++I    F   C    C   L G CE +C
Sbjct: 1023 TIKPCEAHQNKFPYAKKECSILYSDIFASCRNVIDVTSFAKNCHEDTCNCNLGGDCECLC 1082

Query: 116  TKMCCPSHRYHHTSDENHSRNDCSCNCDMDCSLF 149
            T +   +++        H R+  S  C +DC  +
Sbjct: 1083 TSIAAYAYKCCQEGISIHWRS--STVCSLDCEYY 1114


>gi|239744688 PREDICTED: hypothetical protein LOC283310 [Homo sapiens]
          Length = 2250

 Score = 35.0 bits (79), Expect = 0.032
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 5/94 (5%)

Query: 59   SLSSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLF---CQFWDCLLMLPGTCETVC 115
            ++   E  Q  F Y + + S+ + D    C ++I    F   C    C   L G CE +C
Sbjct: 1023 TIKPCEAHQNKFPYAKKECSILYSDIFASCRNVIDVTSFAKNCHEDTCNCNLGGDCECLC 1082

Query: 116  TKMCCPSHRYHHTSDENHSRNDCSCNCDMDCSLF 149
            T +   +++        H R+  S  C +DC  +
Sbjct: 1083 TSIAAYAYKCCQEGISIHWRS--STVCSLDCEYY 1114


>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
           sapiens]
          Length = 3118

 Score = 30.4 bits (67), Expect = 0.78
 Identities = 31/118 (26%), Positives = 45/118 (38%), Gaps = 22/118 (18%)

Query: 42  GPAKENPNEKKLSESSTSLSSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFW 101
           GP  E   E    + S    S + CQ   +    D S+        C SL  +CL C+  
Sbjct: 841 GPRCERCAEGYFGQPSVPGGSCQPCQCNDNL---DFSI-----PGSCDSLSGSCLICK-- 890

Query: 102 DCLLMLPGTCETVCTKMCCPSHRYHHTSDENHSRNDCSCNCDMDCSLFESCH-ETSEC 158
                 PGT    C ++C   +      D   ++N   C C+   S  E CH +T +C
Sbjct: 891 ------PGTTGRYC-ELCADGY----FGDAVDAKNCQPCRCNAGGSFSEVCHSQTGQC 937


>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
           sapiens]
          Length = 3122

 Score = 30.4 bits (67), Expect = 0.78
 Identities = 31/118 (26%), Positives = 45/118 (38%), Gaps = 22/118 (18%)

Query: 42  GPAKENPNEKKLSESSTSLSSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFW 101
           GP  E   E    + S    S + CQ   +    D S+        C SL  +CL C+  
Sbjct: 841 GPRCERCAEGYFGQPSVPGGSCQPCQCNDNL---DFSI-----PGSCDSLSGSCLICK-- 890

Query: 102 DCLLMLPGTCETVCTKMCCPSHRYHHTSDENHSRNDCSCNCDMDCSLFESCH-ETSEC 158
                 PGT    C ++C   +      D   ++N   C C+   S  E CH +T +C
Sbjct: 891 ------PGTTGRYC-ELCADGY----FGDAVDAKNCQPCRCNAGGSFSEVCHSQTGQC 937


>gi|108773804 Fraser syndrome 1 [Homo sapiens]
          Length = 4011

 Score = 30.4 bits (67), Expect = 0.78
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 87  ECASLILACLFCQFWDCLLMLPGTCETVCTKMCCPSHRYHHTSDENHSRNDC-SCNCD 143
           +C +     LFC   + ++ +PG C   C+   C +    +   E  S N C +C CD
Sbjct: 188 QCFTAQCQPLFCNQDETVVRVPGKCCPQCSARSCSAAGQVYEHGEQWSENACTTCICD 245


>gi|167466169 growth arrest-specific 1 [Homo sapiens]
          Length = 345

 Score = 30.0 bits (66), Expect = 1.0
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 108 PGTCETVCTKMCCPSHRYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLE 160
           P +  +  ++  CPSH        NH+R   +   D DC+  E+C  T   +E
Sbjct: 93  PASAASFSSRWRCPSHCISALIQLNHTRRGPALE-DCDCAQDENCKSTKRAIE 144


>gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]
          Length = 1090

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 21  ADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSLS 61
           A  +  NA+  NS++DF++   P  +NP+E +    S S S
Sbjct: 736 ASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFS 776


>gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]
          Length = 1103

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 21  ADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSLS 61
           A  +  NA+  NS++DF++   P  +NP+E +    S S S
Sbjct: 736 ASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFS 776


>gi|211971074 A kinase (PRKA) anchor protein 2 isoform 2 [Homo
           sapiens]
          Length = 859

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 21  ADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSLS 61
           A  +  NA+  NS++DF++   P  +NP+E +    S S S
Sbjct: 505 ASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFS 545


>gi|51873058 A kinase (PRKA) anchor protein 2 isoform 1 [Homo
           sapiens]
          Length = 948

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 21  ADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSLS 61
           A  +  NA+  NS++DF++   P  +NP+E +    S S S
Sbjct: 594 ASNETTNALQENSLADFSLPQTPQTDNPSEGRGEGVSKSFS 634


>gi|134268640 tectorin alpha precursor [Homo sapiens]
          Length = 2155

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 16/91 (17%)

Query: 95   CLFCQFWDCLLMLPGTCETVCTKMCCPSHRYHHTSDENHSRNDCSCN------------- 141
            C+ C      L L   C   C++ C     Y     +  +R++C CN             
Sbjct: 993  CITCTETCETLTLGPICVDSCSEGCQCDEGYALLGSQCVTRSECGCNFEGHQLATNETFW 1052

Query: 142  CDMDCSLFESCHETS---ECLELAMEISEIC 169
             D+DC +F  C  T     C  +  +  E C
Sbjct: 1053 VDLDCQIFCYCSGTDNRVHCETIPCKDDEYC 1083


>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
          Length = 187

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 5/69 (7%)

Query: 95  CLFCQFWDCLLMLPGTCETVCTKMCCPSHRYHHTSDENHSRNDCSCN--CDMDC---SLF 149
           C  C    C    P  C + C   CC S        ++     CSC+  C   C   S  
Sbjct: 80  CGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSCCKPCSCSSGCGSSCCQSSCC 139

Query: 150 ESCHETSEC 158
           + C   S C
Sbjct: 140 KPCCSQSSC 148


>gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens]
          Length = 993

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 7/68 (10%)

Query: 16  TNAKHADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSLSS-----LEECQTTF 70
           TN+ H  E  +  + I   + F I D   + +   K  +E +  ++        ECQ TF
Sbjct: 466 TNSNHCHEAAV--LSIKQRASFKIKDAKCRLHLRNKGKTEEAGRITGPGGAPCSECQVTF 523

Query: 71  SYLQTDTS 78
            +L+ D+S
Sbjct: 524 IHLKCDSS 531


>gi|18158228 zinc finger protein 280A [Homo sapiens]
          Length = 542

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 10  RRHTQLTNAKHADEKPINAIVINSVSDFNITDGPAKENP 48
           + H  LT+ + A+E  +    I+S++  N T  P KENP
Sbjct: 234 KAHFNLTDPERANESGLAMTDISSLASQNKTFDPKKENP 272


>gi|171916095 SMEK homolog 2, suppressor of mek1 isoform 1 [Homo
           sapiens]
          Length = 849

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 11/52 (21%), Positives = 26/52 (50%)

Query: 118 MCCPSHRYHHTSDENHSRNDCSCNCDMDCSLFESCHETSECLELAMEISEIC 169
           +C PSH + H++  +    D     + + ++    ++T++ L L +E+   C
Sbjct: 503 ICTPSHSHSHSTPSSSISQDNIVGSNKNNTICPDNYQTAQLLALILELLTFC 554


>gi|190014607 netrin G2 [Homo sapiens]
          Length = 530

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 120 CPSHRYHHTSDENHSRNDC-SCNCDMDCSLFESCHETSEC 158
           C    Y + S E    N C  CNC+   S+ + C+ET  C
Sbjct: 388 CRLGYYRNGSAELDDENVCIECNCNQIGSVHDRCNETGFC 427


>gi|170932526 nuclear receptor coactivator 7 isoform 2 [Homo
           sapiens]
          Length = 931

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 14/86 (16%)

Query: 20  HADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSLSSLEECQTTFSYL------ 73
           H   KP  + V   +   + +   +  +P   KLS+  +  SS  E     ++L      
Sbjct: 346 HTPTKPSGSSVSEKLKKLDSSRETSHGSPTVTKLSKEPSDTSSAFESTAKENFLGEDDDF 405

Query: 74  --------QTDTSVHHRDTDEECASL 91
                   QT   +H +DT +EC SL
Sbjct: 406 VDLEELSSQTGGGMHKKDTLKECLSL 431


>gi|170932524 nuclear receptor coactivator 7 isoform 1 [Homo
           sapiens]
          Length = 942

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 14/86 (16%)

Query: 20  HADEKPINAIVINSVSDFNITDGPAKENPNEKKLSESSTSLSSLEECQTTFSYL------ 73
           H   KP  + V   +   + +   +  +P   KLS+  +  SS  E     ++L      
Sbjct: 357 HTPTKPSGSSVSEKLKKLDSSRETSHGSPTVTKLSKEPSDTSSAFESTAKENFLGEDDDF 416

Query: 74  --------QTDTSVHHRDTDEECASL 91
                   QT   +H +DT +EC SL
Sbjct: 417 VDLEELSSQTGGGMHKKDTLKECLSL 442


>gi|37675283 adaptor-related protein complex 4, epsilon 1 subunit
           [Homo sapiens]
          Length = 1137

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 57  STSLSSLEECQTTFSYLQTDTSVHHRDTDEECASLILACLFCQFW--DCLLML 107
           ST+ S  +E     S+L+  T   H +  E C +  ++    + W  DCLLM+
Sbjct: 891 STAASVAKESSLASSFLEETTEYIHSNAMEVCNNETISVSSYKIWKDDCLLMV 943


>gi|48255941 CD44 antigen isoform 4 precursor [Homo sapiens]
          Length = 361

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 13/126 (10%)

Query: 13  TQLTNAKHADEKPINAIVINSVSDFNITDGPAKENPNE----KKLSESSTSLSSLEECQT 68
           T +T+  +A + PI   ++N      +  G  + NP +        +  +S SS E   T
Sbjct: 130 TSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERSST 189

Query: 69  TFSYLQTDTSVHHRDTDEECASLILACLFCQFWDCLLMLPGTCETVCTKMCCPSHRYHHT 128
           +  Y+    S  H   DE+   +          D    +P T +         SH  H +
Sbjct: 190 SGGYIFYTFSTVHPIPDEDSPWIT---------DSTDRIPATRDQDTFHPSGGSHTTHGS 240

Query: 129 SDENHS 134
             + HS
Sbjct: 241 ESDGHS 246


>gi|24041035 notch 2 preproprotein [Homo sapiens]
          Length = 2471

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 102 DCLLMLPGTCETVCTKMCCPSHR--YHHTSDENHSRNDCSCNCDMDCSLFESCHETSECL 159
           +CLL  P  C+   T   C +    Y        S +DCS N D DC+ F SC   S C+
Sbjct: 301 ECLLQ-PNACQNGGT---CANRNGGYGCVCVNGWSGDDCSENID-DCA-FASCTPGSTCI 354

Query: 160 ELAMEISEIC 169
           +     S +C
Sbjct: 355 DRVASFSCMC 364


>gi|46399200 testis-specific bromodomain protein [Homo sapiens]
          Length = 947

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 43  PAKENPNEKKLSESSTSLSSLEECQTTFSYLQTDTS 78
           P+K   N  +LSESS+S SS  E +++ S L +  S
Sbjct: 627 PSKAVENVSRLSESSSSSSSSSESESSSSDLSSSDS 662


>gi|46399198 testis-specific bromodomain protein [Homo sapiens]
          Length = 947

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 43  PAKENPNEKKLSESSTSLSSLEECQTTFSYLQTDTS 78
           P+K   N  +LSESS+S SS  E +++ S L +  S
Sbjct: 627 PSKAVENVSRLSESSSSSSSSSESESSSSDLSSSDS 662


>gi|47419936 SFRS protein kinase 1 [Homo sapiens]
          Length = 655

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 33/157 (21%), Positives = 56/157 (35%), Gaps = 39/157 (24%)

Query: 31  INSVSDFNITDGPAKENPNEKKLSES------------STSLSSLEECQTTFSYLQTDTS 78
           +  + +     GP ++ PN+++ SES              +   LEE  T    +  D +
Sbjct: 286 MQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQEKLEESST----IGQDQT 341

Query: 79  VHHRDTDEECASLILACLFCQFWDCLLMLPGTCETVCTKMCCPSHRYHHTSDENHSRNDC 138
           +  RDT+   A +          +C     G  E +       +    H  D  H+ NDC
Sbjct: 342 LMERDTEGGAAEI----------NC----NGVIEVINYTQNSNNETLRHKED-LHNANDC 386

Query: 139 SC-NCDMDCSLFES-------CHETSECLELAMEISE 167
              N + + S   S         ET  C  +  E+S+
Sbjct: 387 DVQNLNQESSFLSSQNGDSSTSQETDSCTPITSEVSD 423


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.129    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,891,824
Number of Sequences: 37866
Number of extensions: 307400
Number of successful extensions: 1206
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1184
Number of HSP's gapped (non-prelim): 42
length of query: 171
length of database: 18,247,518
effective HSP length: 95
effective length of query: 76
effective length of database: 14,650,248
effective search space: 1113418848
effective search space used: 1113418848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.