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Search of human proteins with 239747261
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747261 PREDICTED: beta-lactamase-like protein
ENSP00000383859-like [Homo sapiens]
(517 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752721 PREDICTED: beta-lactamase-like protein ENSP00000383... 1054 0.0
gi|239747261 PREDICTED: beta-lactamase-like protein ENSP00000383... 1054 0.0
gi|239741085 PREDICTED: beta-lactamase-like protein ENSP00000383... 1054 0.0
gi|26051231 lactamase, beta isoform a [Homo sapiens] 40 0.005
gi|26051233 lactamase, beta isoform b [Homo sapiens] 40 0.005
gi|7661990 mastermind-like 1 [Homo sapiens] 35 0.22
gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo ... 34 0.37
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 32 1.1
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 32 1.1
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 32 1.1
gi|226817316 SH3 domain containing 20 [Homo sapiens] 32 1.1
gi|27734799 REST corepressor 2 [Homo sapiens] 32 1.4
gi|110681708 zinc finger protein 579 [Homo sapiens] 32 1.4
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 31 2.4
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 31 2.4
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 31 2.4
gi|5174711 T-box 1 isoform B [Homo sapiens] 31 2.4
gi|18104952 T-box 1 isoform C [Homo sapiens] 31 2.4
gi|18104950 T-box 1 isoform A [Homo sapiens] 31 2.4
gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain ... 31 2.4
gi|34577122 nuclear factor kappa-B, subunit 1 [Homo sapiens] 31 3.1
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 30 4.1
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 30 4.1
gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2, ... 30 5.3
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 30 5.3
gi|221316650 ephrin receptor EphA1 [Homo sapiens] 30 6.9
gi|4504665 interleukin 2 receptor beta precursor [Homo sapiens] 30 6.9
gi|91208420 bassoon protein [Homo sapiens] 30 6.9
gi|110349750 malonyl-CoA decarboxylase precursor [Homo sapiens] 30 6.9
gi|13994335 Mix-like homeobox protein 1 [Homo sapiens] 30 6.9
>gi|239752721 PREDICTED: beta-lactamase-like protein
ENSP00000383859-like [Homo sapiens]
Length = 517
Score = 1054 bits (2726), Expect = 0.0
Identities = 517/517 (100%), Positives = 517/517 (100%)
Query: 1 MCPRHPEPVPLAHPLPVLKEALEKVDQILRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKK 60
MCPRHPEPVPLAHPLPVLKEALEKVDQILRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKK
Sbjct: 1 MCPRHPEPVPLAHPLPVLKEALEKVDQILRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKK 60
Query: 61 NGSDPASGAPNEYTMYRISSISKIFPVLMLYRLWEEGIVASLDDPLERYASTFTINNPLG 120
NGSDPASGAPNEYTMYRISSISKIFPVLMLYRLWEEGIVASLDDPLERYASTFTINNPLG
Sbjct: 61 NGSDPASGAPNEYTMYRISSISKIFPVLMLYRLWEEGIVASLDDPLERYASTFTINNPLG 120
Query: 121 LASAEQQGLMDGLEQVGPAPRPSPVTLRRMASQLSGLPRRLRSTSLLWKGSTQEALNLLK 180
LASAEQQGLMDGLEQVGPAPRPSPVTLRRMASQLSGLPRRLRSTSLLWKGSTQEALNLLK
Sbjct: 121 LASAEQQGLMDGLEQVGPAPRPSPVTLRRMASQLSGLPRRLRSTSLLWKGSTQEALNLLK 180
Query: 181 DDVLVVDPGTRCHYSTLAFSLLAHVLAAHTAQGDYQRWVSENVLEPLGMADTGFDLTPDV 240
DDVLVVDPGTRCHYSTLAFSLLAHVLAAHTAQGDYQRWVSENVLEPLGMADTGFDLTPDV
Sbjct: 181 DDVLVVDPGTRCHYSTLAFSLLAHVLAAHTAQGDYQRWVSENVLEPLGMADTGFDLTPDV 240
Query: 241 RARLAAGFYGSGRPAPLYDLGWYRPSGQMYSTAADLAKLAVALLGGGPRRLLRPDAAKTL 300
RARLAAGFYGSGRPAPLYDLGWYRPSGQMYSTAADLAKLAVALLGGGPRRLLRPDAAKTL
Sbjct: 241 RARLAAGFYGSGRPAPLYDLGWYRPSGQMYSTAADLAKLAVALLGGGPRRLLRPDAAKTL 300
Query: 301 LAPLLACPGAYFANETGTPWEFHAQRGYRVVRKDGDLDGYAATFSLVPPLRLGLVLLLAG 360
LAPLLACPGAYFANETGTPWEFHAQRGYRVVRKDGDLDGYAATFSLVPPLRLGLVLLLAG
Sbjct: 301 LAPLLACPGAYFANETGTPWEFHAQRGYRVVRKDGDLDGYAATFSLVPPLRLGLVLLLAG 360
Query: 361 PRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFANLTFYEVRAGPAG 420
PRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFANLTFYEVRAGPAG
Sbjct: 361 PRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFANLTFYEVRAGPAG 420
Query: 421 ELRLRQFGPRVEALVPPAFRTLALRHLHGRVFQLHVAHEFPCALPLGDAWLSLEAQHGQL 480
ELRLRQFGPRVEALVPPAFRTLALRHLHGRVFQLHVAHEFPCALPLGDAWLSLEAQHGQL
Sbjct: 421 ELRLRQFGPRVEALVPPAFRTLALRHLHGRVFQLHVAHEFPCALPLGDAWLSLEAQHGQL 480
Query: 481 VNFYPLDHHGLSPGFDVPGLNTYRVLRLRGKPVFKTQ 517
VNFYPLDHHGLSPGFDVPGLNTYRVLRLRGKPVFKTQ
Sbjct: 481 VNFYPLDHHGLSPGFDVPGLNTYRVLRLRGKPVFKTQ 517
>gi|239747261 PREDICTED: beta-lactamase-like protein
ENSP00000383859-like [Homo sapiens]
Length = 517
Score = 1054 bits (2726), Expect = 0.0
Identities = 517/517 (100%), Positives = 517/517 (100%)
Query: 1 MCPRHPEPVPLAHPLPVLKEALEKVDQILRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKK 60
MCPRHPEPVPLAHPLPVLKEALEKVDQILRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKK
Sbjct: 1 MCPRHPEPVPLAHPLPVLKEALEKVDQILRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKK 60
Query: 61 NGSDPASGAPNEYTMYRISSISKIFPVLMLYRLWEEGIVASLDDPLERYASTFTINNPLG 120
NGSDPASGAPNEYTMYRISSISKIFPVLMLYRLWEEGIVASLDDPLERYASTFTINNPLG
Sbjct: 61 NGSDPASGAPNEYTMYRISSISKIFPVLMLYRLWEEGIVASLDDPLERYASTFTINNPLG 120
Query: 121 LASAEQQGLMDGLEQVGPAPRPSPVTLRRMASQLSGLPRRLRSTSLLWKGSTQEALNLLK 180
LASAEQQGLMDGLEQVGPAPRPSPVTLRRMASQLSGLPRRLRSTSLLWKGSTQEALNLLK
Sbjct: 121 LASAEQQGLMDGLEQVGPAPRPSPVTLRRMASQLSGLPRRLRSTSLLWKGSTQEALNLLK 180
Query: 181 DDVLVVDPGTRCHYSTLAFSLLAHVLAAHTAQGDYQRWVSENVLEPLGMADTGFDLTPDV 240
DDVLVVDPGTRCHYSTLAFSLLAHVLAAHTAQGDYQRWVSENVLEPLGMADTGFDLTPDV
Sbjct: 181 DDVLVVDPGTRCHYSTLAFSLLAHVLAAHTAQGDYQRWVSENVLEPLGMADTGFDLTPDV 240
Query: 241 RARLAAGFYGSGRPAPLYDLGWYRPSGQMYSTAADLAKLAVALLGGGPRRLLRPDAAKTL 300
RARLAAGFYGSGRPAPLYDLGWYRPSGQMYSTAADLAKLAVALLGGGPRRLLRPDAAKTL
Sbjct: 241 RARLAAGFYGSGRPAPLYDLGWYRPSGQMYSTAADLAKLAVALLGGGPRRLLRPDAAKTL 300
Query: 301 LAPLLACPGAYFANETGTPWEFHAQRGYRVVRKDGDLDGYAATFSLVPPLRLGLVLLLAG 360
LAPLLACPGAYFANETGTPWEFHAQRGYRVVRKDGDLDGYAATFSLVPPLRLGLVLLLAG
Sbjct: 301 LAPLLACPGAYFANETGTPWEFHAQRGYRVVRKDGDLDGYAATFSLVPPLRLGLVLLLAG 360
Query: 361 PRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFANLTFYEVRAGPAG 420
PRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFANLTFYEVRAGPAG
Sbjct: 361 PRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFANLTFYEVRAGPAG 420
Query: 421 ELRLRQFGPRVEALVPPAFRTLALRHLHGRVFQLHVAHEFPCALPLGDAWLSLEAQHGQL 480
ELRLRQFGPRVEALVPPAFRTLALRHLHGRVFQLHVAHEFPCALPLGDAWLSLEAQHGQL
Sbjct: 421 ELRLRQFGPRVEALVPPAFRTLALRHLHGRVFQLHVAHEFPCALPLGDAWLSLEAQHGQL 480
Query: 481 VNFYPLDHHGLSPGFDVPGLNTYRVLRLRGKPVFKTQ 517
VNFYPLDHHGLSPGFDVPGLNTYRVLRLRGKPVFKTQ
Sbjct: 481 VNFYPLDHHGLSPGFDVPGLNTYRVLRLRGKPVFKTQ 517
>gi|239741085 PREDICTED: beta-lactamase-like protein
ENSP00000383859-like [Homo sapiens]
Length = 517
Score = 1054 bits (2726), Expect = 0.0
Identities = 517/517 (100%), Positives = 517/517 (100%)
Query: 1 MCPRHPEPVPLAHPLPVLKEALEKVDQILRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKK 60
MCPRHPEPVPLAHPLPVLKEALEKVDQILRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKK
Sbjct: 1 MCPRHPEPVPLAHPLPVLKEALEKVDQILRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKK 60
Query: 61 NGSDPASGAPNEYTMYRISSISKIFPVLMLYRLWEEGIVASLDDPLERYASTFTINNPLG 120
NGSDPASGAPNEYTMYRISSISKIFPVLMLYRLWEEGIVASLDDPLERYASTFTINNPLG
Sbjct: 61 NGSDPASGAPNEYTMYRISSISKIFPVLMLYRLWEEGIVASLDDPLERYASTFTINNPLG 120
Query: 121 LASAEQQGLMDGLEQVGPAPRPSPVTLRRMASQLSGLPRRLRSTSLLWKGSTQEALNLLK 180
LASAEQQGLMDGLEQVGPAPRPSPVTLRRMASQLSGLPRRLRSTSLLWKGSTQEALNLLK
Sbjct: 121 LASAEQQGLMDGLEQVGPAPRPSPVTLRRMASQLSGLPRRLRSTSLLWKGSTQEALNLLK 180
Query: 181 DDVLVVDPGTRCHYSTLAFSLLAHVLAAHTAQGDYQRWVSENVLEPLGMADTGFDLTPDV 240
DDVLVVDPGTRCHYSTLAFSLLAHVLAAHTAQGDYQRWVSENVLEPLGMADTGFDLTPDV
Sbjct: 181 DDVLVVDPGTRCHYSTLAFSLLAHVLAAHTAQGDYQRWVSENVLEPLGMADTGFDLTPDV 240
Query: 241 RARLAAGFYGSGRPAPLYDLGWYRPSGQMYSTAADLAKLAVALLGGGPRRLLRPDAAKTL 300
RARLAAGFYGSGRPAPLYDLGWYRPSGQMYSTAADLAKLAVALLGGGPRRLLRPDAAKTL
Sbjct: 241 RARLAAGFYGSGRPAPLYDLGWYRPSGQMYSTAADLAKLAVALLGGGPRRLLRPDAAKTL 300
Query: 301 LAPLLACPGAYFANETGTPWEFHAQRGYRVVRKDGDLDGYAATFSLVPPLRLGLVLLLAG 360
LAPLLACPGAYFANETGTPWEFHAQRGYRVVRKDGDLDGYAATFSLVPPLRLGLVLLLAG
Sbjct: 301 LAPLLACPGAYFANETGTPWEFHAQRGYRVVRKDGDLDGYAATFSLVPPLRLGLVLLLAG 360
Query: 361 PRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFANLTFYEVRAGPAG 420
PRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFANLTFYEVRAGPAG
Sbjct: 361 PRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFANLTFYEVRAGPAG 420
Query: 421 ELRLRQFGPRVEALVPPAFRTLALRHLHGRVFQLHVAHEFPCALPLGDAWLSLEAQHGQL 480
ELRLRQFGPRVEALVPPAFRTLALRHLHGRVFQLHVAHEFPCALPLGDAWLSLEAQHGQL
Sbjct: 421 ELRLRQFGPRVEALVPPAFRTLALRHLHGRVFQLHVAHEFPCALPLGDAWLSLEAQHGQL 480
Query: 481 VNFYPLDHHGLSPGFDVPGLNTYRVLRLRGKPVFKTQ 517
VNFYPLDHHGLSPGFDVPGLNTYRVLRLRGKPVFKTQ
Sbjct: 481 VNFYPLDHHGLSPGFDVPGLNTYRVLRLRGKPVFKTQ 517
>gi|26051231 lactamase, beta isoform a [Homo sapiens]
Length = 547
Score = 40.0 bits (92), Expect = 0.005
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 29 LRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKKNGSDPASGAPNEYTMYRISSISKIFPVL 88
++ + APG+ +V + +W+ G + + P T+ RI+SISK ++
Sbjct: 118 IKDEVGAPGIVVGVSV---DGKEVWSEGLGYADVENRVPCKPE--TVMRIASISKSLTMV 172
Query: 89 MLYRLWEEGIVASLDDPLERYASTFTINNPLGLASAEQQGLMDGLEQVGPAPRPSPVTLR 148
L +LWE G + LD P++ Y F E +G E+V VT R
Sbjct: 173 ALAKLWEAGKL-DLDIPVQHYVPEF--------PEKEYEG-----EKVS-------VTTR 211
Query: 149 RMASQLSGLPRRLRSTSLLWKGSTQEALNLLKDDV 183
+ S LSG+ + + + +AL ++K++V
Sbjct: 212 LLISHLSGIRHYEKDIKKVKEEKAYKALKMMKENV 246
Score = 35.0 bits (79), Expect = 0.16
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 14/121 (11%)
Query: 174 EALNLLKDDVLVVDPGTRCHYSTLAFSLLAHVLAAHTAQGDYQRWVSENVLEPLGMADTG 233
E+L L K+D L PG++ YST ++LLA ++ A G + + L M T
Sbjct: 303 ESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIV--ERASGCKYLDYMQKIFHDLDMLTTV 360
Query: 234 FDLTPDV---RARLAAGFYGSGRP-----APLYDLGWYRPSGQMYSTAADLAKLAVALLG 285
+ V RAR FY + P D + G ST DL K A+L
Sbjct: 361 QEENEPVIYNRAR----FYVYNKKKRLVNTPYVDNSYKWAGGGFLSTVGDLLKFGNAMLY 416
Query: 286 G 286
G
Sbjct: 417 G 417
>gi|26051233 lactamase, beta isoform b [Homo sapiens]
Length = 373
Score = 40.0 bits (92), Expect = 0.005
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 29 LRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKKNGSDPASGAPNEYTMYRISSISKIFPVL 88
++ + APG+ +V + +W+ G + + P T+ RI+SISK ++
Sbjct: 118 IKDEVGAPGIVVGVSV---DGKEVWSEGLGYADVENRVPCKPE--TVMRIASISKSLTMV 172
Query: 89 MLYRLWEEGIVASLDDPLERYASTFTINNPLGLASAEQQGLMDGLEQVGPAPRPSPVTLR 148
L +LWE G + LD P++ Y F E +G E+V VT R
Sbjct: 173 ALAKLWEAGKL-DLDIPVQHYVPEF--------PEKEYEG-----EKVS-------VTTR 211
Query: 149 RMASQLSGLPRRLRSTSLLWKGSTQEALNLLKDDV 183
+ S LSG+ + + + +AL ++K++V
Sbjct: 212 LLISHLSGIRHYEKDIKKVKEEKAYKALKMMKENV 246
Score = 31.2 bits (69), Expect = 2.4
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 174 EALNLLKDDVLVVDPGTRCHYSTLAFSLLAHVL 206
E+L L K+D L PG++ YST ++LLA ++
Sbjct: 303 ESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIV 335
>gi|7661990 mastermind-like 1 [Homo sapiens]
Length = 1016
Score = 34.7 bits (78), Expect = 0.22
Identities = 17/36 (47%), Positives = 19/36 (52%)
Query: 362 RPPGPDLVARAYDELLPALERALREAEPGPAPPPTA 397
RP P A A LLP + R + P PAPPPTA
Sbjct: 888 RPMAPMSSAAAVGSLLPPVSAQQRTSAPAPAPPPTA 923
>gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo
sapiens]
Length = 319
Score = 33.9 bits (76), Expect = 0.37
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 21/93 (22%)
Query: 323 HAQRGYRVVRKD--------GDLDGYAATFSLVPPLRLGLVLLLAGPRP-PGPDLVARA- 372
H RGYR + +D GDL + PP AGPRP P P + R
Sbjct: 174 HKVRGYRYLEEDNSDESDAEGDLGDGEEAEAEAPP---------AGPRPGPEPAGLGRRP 224
Query: 373 --YDELLPALERALREAEPGPAPPPTAHPFAGY 403
Y++ A+ R E PGP P + P + Y
Sbjct: 225 CPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVY 257
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 14/89 (15%)
Query: 348 PPLRLGLVLLLAGPRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFA 407
PP+ LG P PP + + P L + A P P P PTA P A
Sbjct: 173 PPVYLG-----NKPTPPRQEGSFGGRPKSQPPLPQ--ETAAPAPQPGPTAPP-------A 218
Query: 408 NLTFYEVRAGPAGELRLRQFGPRVEALVP 436
YE R GP G R GP A +P
Sbjct: 219 RPPAYESREGPRGRAESRGSGPAQPAHLP 247
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 14/89 (15%)
Query: 348 PPLRLGLVLLLAGPRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFA 407
PP+ LG P PP + + P L + A P P P PTA P A
Sbjct: 173 PPVYLG-----NKPTPPRQEGSFGGRPKSQPPLPQ--ETAAPAPQPGPTAPP-------A 218
Query: 408 NLTFYEVRAGPAGELRLRQFGPRVEALVP 436
YE R GP G R GP A +P
Sbjct: 219 RPPAYESREGPRGRAESRGSGPAQPAHLP 247
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 14/89 (15%)
Query: 348 PPLRLGLVLLLAGPRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFA 407
PP+ LG P PP + + P L + A P P P PTA P A
Sbjct: 173 PPVYLG-----NKPTPPRQEGSFGGRPKSQPPLPQ--ETAAPAPQPGPTAPP-------A 218
Query: 408 NLTFYEVRAGPAGELRLRQFGPRVEALVP 436
YE R GP G R GP A +P
Sbjct: 219 RPPAYESREGPRGRAESRGSGPAQPAHLP 247
>gi|226817316 SH3 domain containing 20 [Homo sapiens]
Length = 263
Score = 32.3 bits (72), Expect = 1.1
Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 362 RPPG--PDLVARAYDELLPALERALREAEPGPAPPPTA-HPFAGYFTFANLTFYEVRAGP 418
R PG P + Y LPAL A PGP P P A P A + F + AGP
Sbjct: 50 REPGGRPFYLPAQYVRELPALGNPAAAAPPGPHPSPAAPEPLAYDYRFVSAA---ATAGP 106
Query: 419 AGELRLRQFGPRVEALVPPAFRTLA 443
G + G R +L PA R A
Sbjct: 107 DG--APEESGGRASSLCGPAQRGAA 129
>gi|27734799 REST corepressor 2 [Homo sapiens]
Length = 523
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 8/50 (16%)
Query: 348 PPLRLGLVLL-LAGPRPPGPDLVARAYDELLPALERALREAEPGPAPPPT 396
PPL+ G L P P P L+ PAL A PGP PPPT
Sbjct: 468 PPLQQGRFLQPRLAPNQPPPPLIR-------PALAAPRHSARPGPQPPPT 510
>gi|110681708 zinc finger protein 579 [Homo sapiens]
Length = 562
Score = 32.0 bits (71), Expect = 1.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 361 PRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFAN 408
P PP P L A +E LP ++E P P PP + P F A+
Sbjct: 484 PPPPPPPLKAEQEEEGLPLPLANIKEEPPSPGTPPQSPPAPPVFLSAS 531
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 31.2 bits (69), Expect = 2.4
Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 21/93 (22%)
Query: 341 AATFSLVPPLRLGLVLLLAGPRPP--GPDLVARAYDELLPALERALREAEPGPAPPPTAH 398
AA VPP L A RPP GPD P L AL PGP PPP+
Sbjct: 567 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG-----PRLTLALA---PGPPPPPSRS 618
Query: 399 P--------FAGYFTFANLTFYEVR---AGPAG 420
P AG+ + A T E+R +GP G
Sbjct: 619 PSSTLSGPDLAGHSSSATSTPEELRGYDSGPEG 651
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 31.2 bits (69), Expect = 2.4
Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 21/93 (22%)
Query: 341 AATFSLVPPLRLGLVLLLAGPRPP--GPDLVARAYDELLPALERALREAEPGPAPPPTAH 398
AA VPP L A RPP GPD P L AL PGP PPP+
Sbjct: 836 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG-----PRLTLALA---PGPPPPPSRS 887
Query: 399 P--------FAGYFTFANLTFYEVR---AGPAG 420
P AG+ + A T E+R +GP G
Sbjct: 888 PSSTLSGPDLAGHSSSATSTPEELRGYDSGPEG 920
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 31.2 bits (69), Expect = 2.4
Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 21/93 (22%)
Query: 341 AATFSLVPPLRLGLVLLLAGPRPP--GPDLVARAYDELLPALERALREAEPGPAPPPTAH 398
AA VPP L A RPP GPD P L AL PGP PPP+
Sbjct: 528 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG-----PRLTLALA---PGPPPPPSRS 579
Query: 399 P--------FAGYFTFANLTFYEVR---AGPAG 420
P AG+ + A T E+R +GP G
Sbjct: 580 PSSTLSGPDLAGHSSSATSTPEELRGYDSGPEG 612
>gi|5174711 T-box 1 isoform B [Homo sapiens]
Length = 372
Score = 31.2 bits (69), Expect = 2.4
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Query: 360 GPRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFA 401
GPR P P YD A A PGP PPP A+PFA
Sbjct: 39 GPREPPPP--PPRYDPCAAAAPGA-----PGPPPPPHAYPFA 73
>gi|18104952 T-box 1 isoform C [Homo sapiens]
Length = 495
Score = 31.2 bits (69), Expect = 2.4
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Query: 360 GPRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFA 401
GPR P P YD A A PGP PPP A+PFA
Sbjct: 39 GPREPPPP--PPRYDPCAAAAPGA-----PGPPPPPHAYPFA 73
>gi|18104950 T-box 1 isoform A [Homo sapiens]
Length = 398
Score = 31.2 bits (69), Expect = 2.4
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Query: 360 GPRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFA 401
GPR P P YD A A PGP PPP A+PFA
Sbjct: 39 GPREPPPP--PPRYDPCAAAAPGA-----PGPPPPPHAYPFA 73
>gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
isoform a [Homo sapiens]
Length = 1006
Score = 31.2 bits (69), Expect = 2.4
Identities = 61/221 (27%), Positives = 76/221 (34%), Gaps = 41/221 (18%)
Query: 253 RPAPLYDLGWYRPSGQMYSTAADLAKLAV-----------------ALLGGGPRRLLRPD 295
RP Y LG + S A D A LA ALL G P +P
Sbjct: 719 RPISFYQLGSNQLQSNAVSLARDAANLAKEKQRAFMPSILQNETYGALLSGSPPP-AQPA 777
Query: 296 AAKTLLAPLLA---CPGAYFANETGTPWEFHAQRGYRVVRKDGDLDGYAATFSLVPPLRL 352
A T AP L A+ T W+ ++ R+ D A +PPLR+
Sbjct: 778 APSTTSAPPLPPRNVGKVQTASSANTLWKTNSVSVDGGSRQRSSSDP-PAVHPPLPPLRV 836
Query: 353 GLVLLLAGPRPPGPDLVARAYDELLPALERALREAEPG-------PAPP------PTAHP 399
L P PP P VA+ ++ AL + + A PG P PP P P
Sbjct: 837 TSTNPLT-PTPPPP--VAKT-PSVMEALSQPSKPAPPGISQIRPPPLPPQPPSRLPQKKP 892
Query: 400 FAGYFTFANLTFYEVRAGPAGELRLRQFGPRVEALV--PPA 438
G LT GP GP A+V PPA
Sbjct: 893 APGADKSTPLTNKGQPRGPVDLSATEALGPLSNAMVLQPPA 933
>gi|34577122 nuclear factor kappa-B, subunit 1 [Homo sapiens]
Length = 969
Score = 30.8 bits (68), Expect = 3.1
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 22/129 (17%)
Query: 88 LMLYRLWEEGIVASLDDPLERYASTFT------INNPLGLASAEQQGLMDGLEQVGPAPR 141
L LY+L E + DP + +A+ +NN L+ A + LMD E G R
Sbjct: 818 LQLYKLLE------IPDPDKNWATLAQKLGLGILNNAFRLSPAPSKTLMDNYEVSGGTVR 871
Query: 142 PSPVTLRRM-------ASQLSGLPRRLRSTS---LLWKGSTQEALNLLKDDVLVVDPGTR 191
LR+M Q + P + S + L ST++ ++ L+D V D G
Sbjct: 872 ELVEALRQMGYTEAIEVIQAASSPVKTTSQAHSLPLSPASTRQQIDELRDSDSVCDSGVE 931
Query: 192 CHYSTLAFS 200
+ L+F+
Sbjct: 932 TSFRKLSFT 940
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 30.4 bits (67), Expect = 4.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 105 PLERYASTFTINNPLGLASAEQQGLMDGLEQVGPAPRPSPVTLRRMASQLSGLPRRLRST 164
PL + ++ +P G + AE+Q +D L+Q+ P LRRM +++ R +
Sbjct: 508 PLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEP----LRRMINKIDKNEDRKKDL 563
Query: 165 SLLWKGSTQEALNLLKDDVLVVDPGTRCHYSTL 197
S + + L++L DP RC TL
Sbjct: 564 SKM-----KSLLDIL------TDPSKRCPLKTL 585
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 30.4 bits (67), Expect = 4.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 105 PLERYASTFTINNPLGLASAEQQGLMDGLEQVGPAPRPSPVTLRRMASQLSGLPRRLRST 164
PL + ++ +P G + AE+Q +D L+Q+ P LRRM +++ R +
Sbjct: 468 PLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEP----LRRMINKIDKNEDRKKDL 523
Query: 165 SLLWKGSTQEALNLLKDDVLVVDPGTRCHYSTL 197
S + + L++L DP RC TL
Sbjct: 524 SKM-----KSLLDIL------TDPSKRCPLKTL 545
>gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Homo sapiens]
Length = 616
Score = 30.0 bits (66), Expect = 5.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 348 PPLRLGLVLLLAGPRPPGPD---LVARAYDELLPALERALREAEPGPAPPPTAHPFAG 402
P L G +LL PP P L R ++ P ++ ++ P P P P A P AG
Sbjct: 219 PGLCPGPNVLLNQQNPPAPQPQHLARRPVKDIPPLMQTPIQGGIPAPGPIPAAVPGAG 276
>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
Length = 1858
Score = 30.0 bits (66), Expect = 5.3
Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 10/65 (15%)
Query: 360 GPRPPGPDLVARAYDELLPALERALREAEPGPAPPPTAHPFAGYFTFANLTF----YEVR 415
G RP P L L RA + P P PPP P A Y A+L F V
Sbjct: 1550 GDRPASPGLA------LFNGSGRASPPSTPPPPPPPPGPPPAPYRPCAHLAFPPEPAPVN 1603
Query: 416 AGPAG 420
AG AG
Sbjct: 1604 AGKAG 1608
>gi|221316650 ephrin receptor EphA1 [Homo sapiens]
Length = 976
Score = 29.6 bits (65), Expect = 6.9
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 349 PLRLGLVLLLAGPRPPGPDLVARAYDELLPALERALRE 386
PL LGLVLLL P PPG ARA + L +A E
Sbjct: 6 PLGLGLVLLLCAPLPPG----ARAKEVTLMDTSKAQGE 39
>gi|4504665 interleukin 2 receptor beta precursor [Homo sapiens]
Length = 551
Score = 29.6 bits (65), Expect = 6.9
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 335 GDLDGYAATFSLVPPLRLGLVLLLAGPRPPG--PDLVARAYDELLPAL-ERALREAEPGP 391
G+ D Y TF L L LL GP PP P + + P+L ER R+ +P P
Sbjct: 413 GEDDAYC-TFPSRDDLLLFSPSLLGGPSPPSTAPGGSGAGEERMPPSLQERVPRDWDPQP 471
Query: 392 APPPT 396
PPT
Sbjct: 472 LGPPT 476
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 29.6 bits (65), Expect = 6.9
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 139 APRPSPVTLRRMASQLSGLPRRLRSTSLLWKGSTQEALNLLKDDVLVVDPGTRCHYSTLA 198
AP PSP M +Q + P R + L+W+ S+QEA ++ TR +++ +
Sbjct: 1523 APTPSP-----MVAQGTQTPHRPSTPRLVWQESSQEAPFMVITLASDASSQTRMVHASAS 1577
Query: 199 FSLLAHVLAAHTAQGDYQRWVSENV--LEPLGMADTGFDLTPDVRARLAAGFYGSG 252
S L Y + +V L P GF P A YG G
Sbjct: 1578 TSPLCSPTETQPTTHGYSQTTPPSVSQLPPEPPGPPGFPRVPSAGADGPLALYGWG 1633
>gi|110349750 malonyl-CoA decarboxylase precursor [Homo sapiens]
Length = 493
Score = 29.6 bits (65), Expect = 6.9
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 13/52 (25%)
Query: 354 LVLLLAGPRPPGPDLVA--------RAYDELL-----PALERALREAEPGPA 392
L+ L PRPPGP L + RA DELL P LRE P PA
Sbjct: 13 LLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPA 64
>gi|13994335 Mix-like homeobox protein 1 [Homo sapiens]
Length = 232
Score = 29.6 bits (65), Expect = 6.9
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 12/53 (22%)
Query: 345 SLVPPLRLGLVLLLAGPRPPGPDLVARAYDELLPALERALREAEPGPAPPPTA 397
+L+PP LL A P PGP A +PGPAPPP A
Sbjct: 28 ALLPPPSPAAALLPAPPAGPGPATFA------------GFLGRDPGPAPPPPA 68
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,394,839
Number of Sequences: 37866
Number of extensions: 1240479
Number of successful extensions: 4030
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 3986
Number of HSP's gapped (non-prelim): 60
length of query: 517
length of database: 18,247,518
effective HSP length: 107
effective length of query: 410
effective length of database: 14,195,856
effective search space: 5820300960
effective search space used: 5820300960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.