Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239747131
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747131 PREDICTED: hypothetical protein XP_002343920 [Homo
sapiens]
(156 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747131 PREDICTED: hypothetical protein XP_002343920 [Homo ... 309 5e-85
gi|4758404 FSHD region gene 1 [Homo sapiens] 201 2e-52
gi|239758061 PREDICTED: similar to hCG1992776 [Homo sapiens] 188 1e-48
gi|239747887 PREDICTED: hypothetical protein XP_002346465 [Homo ... 188 1e-48
gi|239758069 PREDICTED: similar to FSHD region gene 1 isoform 2 ... 187 3e-48
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 38 0.004
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 38 0.004
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 36 0.012
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 36 0.012
gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens] 36 0.012
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 36 0.015
gi|41055989 M-phase phosphoprotein 8 [Homo sapiens] 36 0.015
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap... 35 0.020
gi|170784809 kinesin family member 17 isoform b [Homo sapiens] 35 0.034
gi|170784807 kinesin family member 17 isoform a [Homo sapiens] 35 0.034
gi|24308179 CTTNBP2 N-terminal like [Homo sapiens] 34 0.044
gi|88759339 aster-associated protein [Homo sapiens] 34 0.044
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 33 0.075
gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 33 0.075
gi|104526627 triadin [Homo sapiens] 33 0.075
gi|239747178 PREDICTED: hypothetical protein XP_002343932 [Homo ... 33 0.098
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ... 33 0.098
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens] 33 0.098
gi|222537714 taxilin beta [Homo sapiens] 33 0.13
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens] 33 0.13
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens] 33 0.13
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 33 0.13
gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens] 33 0.13
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 32 0.17
gi|13699824 kinesin family member 11 [Homo sapiens] 32 0.17
>gi|239747131 PREDICTED: hypothetical protein XP_002343920 [Homo
sapiens]
Length = 156
Score = 309 bits (792), Expect = 5e-85
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MAEYSYAKSTKLVLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCN 60
MAEYSYAKSTKLVLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCN
Sbjct: 1 MAEYSYAKSTKLVLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCN 60
Query: 61 EAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHK 120
EAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHK
Sbjct: 61 EAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHK 120
Query: 121 LKISKEDSKILKKAQKDGFLQETLLDRVAVIACLHL 156
LKISKEDSKILKKAQKDGFLQETLLDRVAVIACLHL
Sbjct: 121 LKISKEDSKILKKAQKDGFLQETLLDRVAVIACLHL 156
>gi|4758404 FSHD region gene 1 [Homo sapiens]
Length = 258
Score = 201 bits (512), Expect = 2e-52
Identities = 100/105 (95%), Positives = 102/105 (97%)
Query: 45 GKMALLASNGCFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQ 104
GKMALLASN CFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQ
Sbjct: 145 GKMALLASNSCFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQ 204
Query: 105 CEINYVKKFQSFQEHKLKISKEDSKILKKAQKDGFLQETLLDRVA 149
CEINYVKKFQSFQ+HKLKISKEDSKILKKA+KDGFL ETLLDR A
Sbjct: 205 CEINYVKKFQSFQDHKLKISKEDSKILKKARKDGFLHETLLDRRA 249
Score = 83.2 bits (204), Expect = 8e-17
Identities = 40/45 (88%), Positives = 43/45 (95%)
Query: 1 MAEYSYAKSTKLVLKGTKTKSKKKKSKEKKRKREEDEETQFDMLG 45
MAEYSY KSTKLVLKGTKTKSKKKKSK+KKRKREEDEETQ D++G
Sbjct: 1 MAEYSYVKSTKLVLKGTKTKSKKKKSKDKKRKREEDEETQLDIVG 45
>gi|239758061 PREDICTED: similar to hCG1992776 [Homo sapiens]
Length = 206
Score = 188 bits (478), Expect = 1e-48
Identities = 93/104 (89%), Positives = 98/104 (94%)
Query: 44 LGKMALLASNGCFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVK 103
+GKMAL SN CFIR +EA DIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGN+K
Sbjct: 103 IGKMALSTSNSCFIRYSEAEDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNIK 162
Query: 104 QCEINYVKKFQSFQEHKLKISKEDSKILKKAQKDGFLQETLLDR 147
QCEINYVKKFQSFQ+HKLKISKE+SKILKKAQKDGFL ETLLDR
Sbjct: 163 QCEINYVKKFQSFQDHKLKISKEESKILKKAQKDGFLHETLLDR 206
>gi|239747887 PREDICTED: hypothetical protein XP_002346465 [Homo
sapiens]
Length = 206
Score = 188 bits (478), Expect = 1e-48
Identities = 93/104 (89%), Positives = 98/104 (94%)
Query: 44 LGKMALLASNGCFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVK 103
+GKMAL SN CFIR +EA DIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGN+K
Sbjct: 103 IGKMALSTSNSCFIRYSEAEDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNIK 162
Query: 104 QCEINYVKKFQSFQEHKLKISKEDSKILKKAQKDGFLQETLLDR 147
QCEINYVKKFQSFQ+HKLKISKE+SKILKKAQKDGFL ETLLDR
Sbjct: 163 QCEINYVKKFQSFQDHKLKISKEESKILKKAQKDGFLHETLLDR 206
>gi|239758069 PREDICTED: similar to FSHD region gene 1 isoform 2
[Homo sapiens]
Length = 124
Score = 187 bits (475), Expect = 3e-48
Identities = 96/103 (93%), Positives = 98/103 (95%), Gaps = 1/103 (0%)
Query: 45 GKMALLASNGCFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQ 104
GKMALLAS+ CFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIP EDKGNVKQ
Sbjct: 23 GKMALLASDSCFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIP-EDKGNVKQ 81
Query: 105 CEINYVKKFQSFQEHKLKISKEDSKILKKAQKDGFLQETLLDR 147
EINYVKKFQSFQ+HK KISKEDSKILKKAQKDGFL ETLLDR
Sbjct: 82 YEINYVKKFQSFQDHKPKISKEDSKILKKAQKDGFLHETLLDR 124
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 37.7 bits (86), Expect = 0.004
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 29/160 (18%)
Query: 2 AEYSYAKSTKLVLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNE 61
AE + ++T + K K K+ KK++K K ++E++E + K +
Sbjct: 618 AEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKK------------ED 665
Query: 62 AGDIEAKSKTAGEEEMIKIRSCAERETKK-------KDDIPEEDKGNVKQCEINYVKKFQ 114
I+ + K EE +++ ++E KK K+ P+E K VK+ E VKK +
Sbjct: 666 KTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEE 725
Query: 115 SFQEHKLKISKEDSKILKKAQKDGFLQETLLDRVAVIACL 154
KE K +KK KD T L A L
Sbjct: 726 ----------KEPKKEIKKLPKDAKKSSTPLSEAKKPAAL 755
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 37.7 bits (86), Expect = 0.004
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 22 KKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGEEEMIKIR 81
KKK K+KK ++EE E+ + K + A + E E + + EEE IK
Sbjct: 314 KKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKE----EEERQKREEEERIKRL 369
Query: 82 SCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKILKKAQKD 137
E + K+++ + +E + KQ E +E K ++ KE K+L K+Q++
Sbjct: 370 EELEAKRKEEERLEQEKRERKKQKE----------KERKERLKKE-GKLLTKSQRE 414
Score = 31.6 bits (70), Expect = 0.29
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 17/136 (12%)
Query: 7 AKSTKLVLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIE 66
AK KL K KK +SK+K+ +R+ +EET K + G A + +
Sbjct: 248 AKLRKLKEKEELETGKKDQSKQKESQRKFEEETV-----KSKVTVDTGVI----PASEEK 298
Query: 67 AKSKTAGEEE-------MIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEH 119
A++ TA E++ K + E+E K+K+ K VK + + K + +E
Sbjct: 299 AETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQ-EALAKLKEEEER 357
Query: 120 KLKISKEDSKILKKAQ 135
+ + +E K L++ +
Sbjct: 358 QKREEEERIKRLEELE 373
Score = 30.0 bits (66), Expect = 0.83
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 36/154 (23%)
Query: 18 KTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGC------FIRCNEAGDIEAKSKT 71
K K K +KS +K EEDE+ + + + +S F++ + K+K
Sbjct: 149 KAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKP 208
Query: 72 -----AGEEE---MIKIRSCA-------ERETKKKDDIPEEDKGNVKQCEINYVKKFQSF 116
+G E+ KI++ A ERE KK+D E+K +++ +
Sbjct: 209 GPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRD----EEKAKLRKLK---------- 254
Query: 117 QEHKLKISKEDSKILKKAQKDGFLQETLLDRVAV 150
++ +L+ K+D K++Q+ F +ET+ +V V
Sbjct: 255 EKEELETGKKDQSKQKESQRK-FEEETVKSKVTV 287
Score = 28.1 bits (61), Expect = 3.2
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 20 KSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGEEEMIK 79
KSK KK KEKK K++ DE+ L +++L EA I+A +T +K
Sbjct: 39 KSKGKKKKEKK-KQDFDEDDILKELEELSL-----------EAQGIKADRETVA----VK 82
Query: 80 IRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEH-KLKISKEDSKILKKAQ 135
E E KD + KG K QSF ++ ++ +DSK K A+
Sbjct: 83 PTENNEEEFTSKDKKKKGQKG-----------KKQSFDDNDSEELEDKDSKSKKTAK 128
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 36.2 bits (82), Expect = 0.012
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 3 EYSYAKSTKLVLKGTKTKSKKKKSKEKKRKREE---DEETQFDMLGKMALLASNGCFIRC 59
E ++ + + K ++ +++K K+ K +RE D++++F LG A+ S G +
Sbjct: 721 ERNFKEERDKIKKESEKSFREEKIKDLKEERENIPTDKDSEFTSLGMSAIEESIGLHLVE 780
Query: 60 NEAGDIEAKSKTAGEEE-------MIKIRSCAERETK--------KKDDIPEEDKGNVKQ 104
E DIE + K E + IK + + E K K + E+DK ++ +
Sbjct: 781 KEI-DIEKQEKHIKESKEKPEKRSQIKEKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSE 839
Query: 105 CEINYVKKFQSFQEHKLKISKEDSK 129
C +K + + H K KE K
Sbjct: 840 CVDKIKEKDKLYSHHTEKCHKEGEK 864
Score = 27.3 bits (59), Expect = 5.4
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 15 KGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEA---GDIEAKSKT 71
K K K+K+K + K+++ D+E+ K + N+A + K KT
Sbjct: 922 KSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQHEKPLSLKEKT 981
Query: 72 AGEEEMIKIRSCAERETKKKD-DIPEEDKGNVKQCEINYVKKFQSFQEH---KLKISKED 127
++E +K E++ K KD D +E + + +IN + K +S + K + +D
Sbjct: 982 --KDEPLKTPDGKEKDKKDKDIDRYKERDKHKDKIQINSLLKLKSEADKPKPKSSPASKD 1039
Query: 128 SKILKKAQKDGFLQETLLDRVAVIACLHL 156
++ +K + L +T +R+ + L +
Sbjct: 1040 TRPKEKRLVNDDLMQTSFERMLSLKDLEI 1068
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 36.2 bits (82), Expect = 0.012
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 3 EYSYAKSTKLVLKGTKTKSKKKKSKEKKRKREE---DEETQFDMLGKMALLASNGCFIRC 59
E ++ + + K ++ +++K K+ K +RE D++++F LG A+ S G +
Sbjct: 744 ERNFKEERDKIKKESEKSFREEKIKDLKEERENIPTDKDSEFTSLGMSAIEESIGLHLVE 803
Query: 60 NEAGDIEAKSKTAGEEE-------MIKIRSCAERETK--------KKDDIPEEDKGNVKQ 104
E DIE + K E + IK + + E K K + E+DK ++ +
Sbjct: 804 KEI-DIEKQEKHIKESKEKPEKRSQIKEKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSE 862
Query: 105 CEINYVKKFQSFQEHKLKISKEDSK 129
C +K + + H K KE K
Sbjct: 863 CVDKIKEKDKLYSHHTEKCHKEGEK 887
Score = 27.3 bits (59), Expect = 5.4
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 15 KGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEA---GDIEAKSKT 71
K K K+K+K + K+++ D+E+ K + N+A + K KT
Sbjct: 945 KSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQHEKPLSLKEKT 1004
Query: 72 AGEEEMIKIRSCAERETKKKD-DIPEEDKGNVKQCEINYVKKFQSFQEH---KLKISKED 127
++E +K E++ K KD D +E + + +IN + K +S + K + +D
Sbjct: 1005 --KDEPLKTPDGKEKDKKDKDIDRYKERDKHKDKIQINSLLKLKSEADKPKPKSSPASKD 1062
Query: 128 SKILKKAQKDGFLQETLLDRVAVIACLHL 156
++ +K + L +T +R+ + L +
Sbjct: 1063 TRPKEKRLVNDDLMQTSFERMLSLKDLEI 1091
>gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens]
Length = 1041
Score = 36.2 bits (82), Expect = 0.012
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 16 GTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGEE 75
G+ + K+KK K ++KREE+EE + GK G + K E+
Sbjct: 115 GSSLQKKRKKRKHLRKKREEEEEEEASEKGKK------------KTGGSKQQTEKPESED 162
Query: 76 EMIKIRSCAERETKKKDDIPE----EDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKIL 131
E + ++ +++D E DK + KK + +LK+++ED K +
Sbjct: 163 EWERTERERLQDLEERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAM 222
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 35.8 bits (81), Expect = 0.015
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 15 KGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGE 74
+G + + KKK+ KE++R+ ++ E + K R E G E K K +
Sbjct: 109 RGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERK---REKERGKRERKRKKRKK 165
Query: 75 EEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKILKKA 134
EE K R +E KK+ + E + KK + + K K K+D K ++
Sbjct: 166 EEREKKRERNRKERKKERERKERRER----------KKERKKERRKKKERKKDRKTDRQT 215
Query: 135 QKDGF--LQETLLDRVAV 150
F L+E+ +RV V
Sbjct: 216 DSQVFRPLRESAFNRVTV 233
Score = 34.3 bits (77), Expect = 0.044
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 15 KGTKTKSKKKK---SKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKT 71
+G K K K+KK KE++RKR+E E+ + + K R E E K +
Sbjct: 58 RGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRK-------RKKEKKKRERKQRG 110
Query: 72 AGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKIL 131
E + K R ERE K++ + + + K+ + +K + +E K K K++ +
Sbjct: 111 RRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREK 170
Query: 132 KK 133
K+
Sbjct: 171 KR 172
Score = 31.2 bits (69), Expect = 0.37
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 15 KGTKTKSKKKKSKEKKRKRE----EDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSK 70
K + + K+K+ +EK+RKRE E ++ + GK + E + E + K
Sbjct: 38 KERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKE-RRK 96
Query: 71 TAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKI 130
E++ + + RE KKK + E ++ N ++ E K+ + + + K KE K
Sbjct: 97 RKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKR 156
Query: 131 LKKAQK 136
+K +K
Sbjct: 157 ERKRKK 162
Score = 28.9 bits (63), Expect = 1.8
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 18 KTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGEEEM 77
+++ KK++ + +KRKRE ++E R E G E K + E
Sbjct: 33 ESERKKERREREKRKREREKE-------------------RKRERGKKEKKKRKKRERGK 73
Query: 78 IKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKILKKAQK 136
+ R ERE ++K+ +E + K+ + K+ + K K KE + K+ ++
Sbjct: 74 ERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRE 132
>gi|41055989 M-phase phosphoprotein 8 [Homo sapiens]
Length = 860
Score = 35.8 bits (81), Expect = 0.015
Identities = 33/136 (24%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 17 TKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGEEE 76
++TK K+KK+ R+ +E++ D+ K A ++ D+E+ ++ +
Sbjct: 142 SETKEDTSPKKKKKKLRQREEKSPDDLKKKKAKAGK----LKDKSKPDLESSLESLVFDL 197
Query: 77 MIKIRSCAERETKKKDDIPEEDKGNVKQC-EINYVKKFQSFQEHKLKISKEDSKILKKAQ 135
K R +E K+ P++D+ VK+ E+ VKK + ++ K K ++ED K +K +
Sbjct: 198 RTKKRISEAKEELKESKKPKKDE--VKETKELKKVKKGE-IRDLKTK-TREDPKENRKTK 253
Query: 136 KDGFLQETLLDRVAVI 151
K+ F++ + +V+
Sbjct: 254 KEKFVESQVESESSVL 269
>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
sapiens]
Length = 796
Score = 35.4 bits (80), Expect = 0.020
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 12 LVLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKT 71
L L+G K + K K +KK + +E +QF++L K + A R + +++
Sbjct: 673 LALRGKKKRKKFMKDAKKKGEMTAEERSQFEIL-KAQMFAE-----RLAKRNRRAKRARA 726
Query: 72 AGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHK 120
EEE +R A+++ + K + +E+ N + + + SF+E K
Sbjct: 727 MPEEE--PVRGPAKKQKQGKKSVFDEELTNTSKKALKQYRAGPSFEERK 773
>gi|170784809 kinesin family member 17 isoform b [Homo sapiens]
Length = 1028
Score = 34.7 bits (78), Expect = 0.034
Identities = 30/137 (21%), Positives = 64/137 (46%), Gaps = 25/137 (18%)
Query: 13 VLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTA 72
V+ G + K+K K K K+RKR DE + L+A+ ++ + +
Sbjct: 752 VVGGEQAKNKDLKEKHKRRKRYADER-------RKQLVAA------------LQNSDEDS 792
Query: 73 GEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQS-FQEHKLKISKEDSKIL 131
G+ ++ + + E + K + E+ + ++ E+ +K QS FQ K+ + +
Sbjct: 793 GDWVLLNVYDSIQEEVRAKSKLLEKMQRKLRAAEVE-IKDLQSEFQLEKI----DYLATI 847
Query: 132 KKAQKDGFLQETLLDRV 148
++ ++D L + LL++V
Sbjct: 848 RRQERDSMLLQQLLEQV 864
>gi|170784807 kinesin family member 17 isoform a [Homo sapiens]
Length = 1029
Score = 34.7 bits (78), Expect = 0.034
Identities = 30/137 (21%), Positives = 64/137 (46%), Gaps = 25/137 (18%)
Query: 13 VLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTA 72
V+ G + K+K K K K+RKR DE + L+A+ ++ + +
Sbjct: 752 VVGGEQAKNKDLKEKHKRRKRYADER-------RKQLVAA------------LQNSDEDS 792
Query: 73 GEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQS-FQEHKLKISKEDSKIL 131
G+ ++ + + E + K + E+ + ++ E+ +K QS FQ K+ + +
Sbjct: 793 GDWVLLNVYDSIQEEVRAKSKLLEKMQRKLRAAEVE-IKDLQSEFQLEKI----DYLATI 847
Query: 132 KKAQKDGFLQETLLDRV 148
++ ++D L + LL++V
Sbjct: 848 RRQERDSMLLQQLLEQV 864
>gi|24308179 CTTNBP2 N-terminal like [Homo sapiens]
Length = 639
Score = 34.3 bits (77), Expect = 0.044
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 14 LKGTKTKSKKKKSKEKKRKRE-EDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTA 72
L+ K++ KK + ++KK + E+E ++ L M +L C +A + A+
Sbjct: 147 LEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVL-------ECKKATNKAAEEGQK 199
Query: 73 GEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSF-------------QEH 119
E +K+ R +K ++++ E K + Q E K+ F +E+
Sbjct: 200 AGELSLKLEKEKSRVSKLEEELAAERKRGL-QTEAQVEKQLSEFDIEREQLRAKLNREEN 258
Query: 120 KLKISKEDSKILKKAQKD 137
+ K KE+ + LKK KD
Sbjct: 259 RTKTLKEEMESLKKIVKD 276
>gi|88759339 aster-associated protein [Homo sapiens]
Length = 647
Score = 34.3 bits (77), Expect = 0.044
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 15 KGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGE 74
K K + KK+ +EK +K+ E+E A F + E K K E
Sbjct: 482 KEAKKIAAKKRLEEKNKKKTEEENAARKGEALQA-------FEKWKEKKMEYLKEKNRKE 534
Query: 75 EEMIKIRSCAERET---KKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKIL 131
E + + E ET KKKD++ +K N K K+ Q+ K KI+++ + L
Sbjct: 535 REYERAKKQKEEETVAEKKKDNLTAVEKWNEK-------KEAFFKQKEKEKINEKRKEEL 587
Query: 132 KKAQK 136
K+A+K
Sbjct: 588 KRAEK 592
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 33.5 bits (75), Expect = 0.075
Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 20 KSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGEEEMIK 79
++K+ + KEK++K+E+ E + GK R E E K + +EE K
Sbjct: 105 ENKEGEEKEKRKKKEKKERGRTSKEGKERE--------RKEERKREERKERERKKEEREK 156
Query: 80 IRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKILKKAQK 136
R ER+ +++ + E+++ ++ K+ ++ +E K + +++ + KK +K
Sbjct: 157 ERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERK 213
Score = 32.0 bits (71), Expect = 0.22
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 18 KTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGEEEM 77
K + +KK+ +EK+R+R+E ++ + +G+ E E K + +E
Sbjct: 145 KERERKKEEREKERERKERKKRERKQVGEKE--------EERKEKERKERKKRERNRKER 196
Query: 78 IKIRSCAERETKKKDDIPEED--KGNVKQCEINYVKKFQSFQEHK 120
K R ER +KK+ +E+ K K + N+ +K + +E K
Sbjct: 197 KKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERK 241
Score = 29.3 bits (64), Expect = 1.4
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 22/123 (17%)
Query: 15 KGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGE 74
K +++ KK++ + +KRKRE ++E R E G E K + E
Sbjct: 53 KERESERKKERREREKRKREREKE-------------------RKRERGKKEKKGERKKE 93
Query: 75 EEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKILKKA 134
E K R RE + K+ +E + ++ E K +E K + +E+ K ++
Sbjct: 94 ERERKKR---RREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERK 150
Query: 135 QKD 137
+++
Sbjct: 151 KEE 153
Score = 27.3 bits (59), Expect = 5.4
Identities = 27/125 (21%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 15 KGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGE 74
K + + K+K+ +EK+RKRE ++ + K + N+ G+ + K K +
Sbjct: 61 KERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEK 120
Query: 75 EE---MIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKIL 131
+E K ER+ ++K + +E + ++ E +K + +E K KE+ +
Sbjct: 121 KERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKE 180
Query: 132 KKAQK 136
K+ ++
Sbjct: 181 KERKE 185
>gi|134152708 arginine and glutamate rich 1 [Homo sapiens]
Length = 273
Score = 33.5 bits (75), Expect = 0.075
Identities = 29/131 (22%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 18 KTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGEEEM 77
+T SK+ EK+++ EE+++ +F+ K IR E + + +TA E
Sbjct: 87 RTVSKRSSLDEKQKREEEEKKAEFERQRK----------IRQQEIEEKLIEEETARRVEE 136
Query: 78 IKIRSCAERETKKKDDIPEEDKGNVKQC----EINYVKKFQSFQEHKLKISK--EDSKIL 131
+ + E K+KD+I E V++ E +++ + ++ +L K E+ +
Sbjct: 137 LVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEERA 196
Query: 132 KKAQKDGFLQE 142
K+ + + L+E
Sbjct: 197 KREELERILEE 207
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 33.5 bits (75), Expect = 0.075
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 17/130 (13%)
Query: 15 KGTKTKSKKKKSKEKKRKREED------EETQFDMLGKMALLASNGCFIRCNEAGDIEAK 68
+G K K++KK + E K+K +ED +ET D+ K AS + G ++
Sbjct: 313 EGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKKEPGKASE------TKQGTVKIA 366
Query: 69 SKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQS-FQEHKLKISKED 127
++ A +++ K S ++TKK ++ E+ KG ++ + +V+ +S +EH + K+
Sbjct: 367 AQAAAKKDEKKEDS---KKTKKPAEV-EQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQV 422
Query: 128 SKILKKAQKD 137
++A+++
Sbjct: 423 KAKTERAKEE 432
Score = 33.1 bits (74), Expect = 0.098
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 26/126 (20%)
Query: 19 TKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKT-----AG 73
T +K+K KEK R++E+ E+ + IE K K A
Sbjct: 163 THKEKEKGKEKVREKEKPEK-------------------KATHKEKIEKKEKPETKTLAK 203
Query: 74 EEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKILKK 133
E++ K +E +TKK+ +++K ++ V+K S + K K KE + + K
Sbjct: 204 EQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKEVQKTPS--KPKEKEDKEKAAVSKH 261
Query: 134 AQKDGF 139
QKD +
Sbjct: 262 EQKDQY 267
>gi|239747178 PREDICTED: hypothetical protein XP_002343932 [Homo
sapiens]
Length = 206
Score = 33.1 bits (74), Expect = 0.098
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 3 EYSYAKSTKLVLKGTKTKSKKKK 25
EYS+ KSTKLV KGTK K + K
Sbjct: 163 EYSHVKSTKLVFKGTKAKRRDGK 185
>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
sapiens]
Length = 2542
Score = 33.1 bits (74), Expect = 0.098
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 7 AKSTKLVLKGTKTKSKKKKSKEK-KRKREEDEETQ 40
++ L K K K K+KK KE+ KRK+EEDEE +
Sbjct: 1444 SRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENK 1478
>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
Length = 2617
Score = 33.1 bits (74), Expect = 0.098
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 7 AKSTKLVLKGTKTKSKKKKSKEK-KRKREEDEETQ 40
++ L K K K K+KK KE+ KRK+EEDEE +
Sbjct: 1444 SRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENK 1478
>gi|222537714 taxilin beta [Homo sapiens]
Length = 684
Score = 32.7 bits (73), Expect = 0.13
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 29/131 (22%)
Query: 18 KTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGEEEM 77
+T+ KK K +KK+ + + E+ Q A+LA + C E ++ +KT EE +
Sbjct: 177 RTEQKKLKLLQKKQVQIQKEKDQLQGEHSRAILARSKLESLCRE---LQRHNKTLKEEAL 233
Query: 78 IKIRSCAERETKKKD--------------DIPEEDKGNVKQCEIN---------YVKKFQ 114
+ R E E K+K+ I ++ + N+K C+ N + +++
Sbjct: 234 QRAR---EEEEKRKEITSHFQSTLTDIQGQIEQQSERNMKLCQENTELAEKLKSIIDQYE 290
Query: 115 SFQEHKLKISK 125
+EH KI K
Sbjct: 291 LREEHLDKIFK 301
>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
Length = 1173
Score = 32.7 bits (73), Expect = 0.13
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 10 TKLVLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKS 69
+KL L K KS + + K+K+++R+E MLG + + S ++ E ++ K
Sbjct: 564 SKLRLAPDKLKSTESELKKKEKRRDE-------MLGLVPMRQSI-IDLKEKEIPELRNKL 615
Query: 70 KTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSK 129
+ + E+ET +PEE+ V ++ +++FQ +++ + K
Sbjct: 616 QNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQ------MELKDVERK 669
Query: 130 ILKKAQKDGFLQETLLDR 147
I ++A K LQ LDR
Sbjct: 670 IAQQAAK---LQGIDLDR 684
>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
Length = 1312
Score = 32.7 bits (73), Expect = 0.13
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 10 TKLVLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKS 69
+KL L K KS + + K+K+++R+E MLG + + S ++ E ++ K
Sbjct: 703 SKLRLAPDKLKSTESELKKKEKRRDE-------MLGLVPMRQSI-IDLKEKEIPELRNKL 754
Query: 70 KTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSK 129
+ + E+ET +PEE+ V ++ +++FQ +++ + K
Sbjct: 755 QNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQ------MELKDVERK 808
Query: 130 ILKKAQKDGFLQETLLDR 147
I ++A K LQ LDR
Sbjct: 809 IAQQAAK---LQGIDLDR 823
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 32.7 bits (73), Expect = 0.13
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 28/126 (22%)
Query: 37 EETQFDMLGKMALLASNGCFIRCNEAGDIE-AKSKTAGE-------EEMIKI-------- 80
+ET D+ + + A G I +E GD+ AK K + EE+I+
Sbjct: 1553 KETLEDLYSQKVIQAP-GIIIEADEIGDVRMAKYKLMNQASPEIQKEEIIRADLRNIMVN 1611
Query: 81 ----RSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKILKKAQK 136
R C ERE I EE+KGNV + + + F K +I K D +++A K
Sbjct: 1612 LLSKRDCTEREIL----ISEEEKGNVNLTKTQLLNRSTEFHAEKEEIVKGD---VQQAIK 1664
Query: 137 DGFLQE 142
+ F +E
Sbjct: 1665 NLFSEE 1670
>gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]
Length = 582
Score = 32.7 bits (73), Expect = 0.13
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 17/152 (11%)
Query: 11 KLVLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNG---------CFIRCNE 61
K+ L + TK+ K +E+KR+ E E Q K + +G C R E
Sbjct: 264 KISLSKSPTKTDPKNEEEEKRRIEARREKQRRRREKNSEKYGDGYRMAFTCSFCKFRTFE 323
Query: 62 AGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQEHKL 121
DIE +++ +E + +++TK + E + +C +N KK S ++ +
Sbjct: 324 EKDIELHLESSSHQETL---DHIQKQTKFDKVVME----FLHECMVNKFKK-TSIRKQQT 375
Query: 122 KISKEDSKILKKAQKDGFLQETLLDRVAVIAC 153
E KI++K +G + + +V + C
Sbjct: 376 NNQTEVVKIIEKDVMEGVTVDDHMMKVETVHC 407
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
Length = 1341
Score = 32.3 bits (72), Expect = 0.17
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 18 KTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCNEAGDIEAKSKTAGEEEM 77
+ KSK+KKS++K++ +EE D L + A ++ ++ ++ +++ A
Sbjct: 1188 RAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERA----- 1242
Query: 78 IKIRSCAERETKKKDDIPEEDKGNVKQCE 106
ERE ++K+ EE K K+ E
Sbjct: 1243 ---ERAKEREKRRKEQEEEEQKEREKEAE 1268
>gi|13699824 kinesin family member 11 [Homo sapiens]
Length = 1056
Score = 32.3 bits (72), Expect = 0.17
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 12/136 (8%)
Query: 1 MAEYSYAKSTKLVLKGTKTKSKKKKSKEKKRKREEDEETQFDMLGKMALLASNGCFIRCN 60
++ YA K +L + K K K EE E + D+ A NG +I
Sbjct: 347 LSTLEYAHRAKNILNKPEVNQKLTKKALIKEYTEEIERLKRDLA---AAREKNGVYISEE 403
Query: 61 EAGDIEAKSKTAGEE--EMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQS--- 115
+ K E+ E+I+ E E + ++ ++K + QC+ + K Q
Sbjct: 404 NFRVMSGKLTVQEEQIVELIEKIGAVEEELNRVTELFMDNKNELDQCKSDLQNKTQELET 463
Query: 116 ----FQEHKLKISKED 127
QE KL++ KE+
Sbjct: 464 TQKHLQETKLQLVKEE 479
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,493,234
Number of Sequences: 37866
Number of extensions: 241739
Number of successful extensions: 3702
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 181
Number of HSP's that attempted gapping in prelim test: 2650
Number of HSP's gapped (non-prelim): 872
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.