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Search of human proteins with 239747048
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo
sapiens]
(97 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo ... 233 3e-62
gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo ... 230 2e-61
gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo ... 230 2e-61
gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo ... 230 2e-61
gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo ... 230 2e-61
gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo ... 227 1e-60
gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo ... 227 1e-60
gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo ... 226 3e-60
gi|239747040 PREDICTED: hypothetical protein XP_002344257 [Homo ... 224 1e-59
gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo ... 222 4e-59
gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo ... 218 1e-57
gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo ... 67 2e-12
gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo ... 67 3e-12
gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo ... 67 3e-12
gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo ... 67 3e-12
gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo ... 67 3e-12
gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo ... 67 3e-12
gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo ... 67 3e-12
gi|239755734 PREDICTED: similar to Nanog homeobox isoform 2 [Hom... 36 0.008
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 33 0.064
gi|153945816 Nanog homeobox [Homo sapiens] 30 0.41
gi|239755732 PREDICTED: similar to Nanog homeobox isoform 1 [Hom... 30 0.41
gi|93102379 low density lipoprotein-related protein 1B precursor... 30 0.54
gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens] 28 1.6
gi|29294615 sweet taste receptor T1r isoform b [Homo sapiens] 28 1.6
gi|29294621 sweet taste receptor T1r isoform d [Homo sapiens] 28 1.6
gi|29294619 sweet taste receptor T1r isoform c [Homo sapiens] 28 1.6
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 28 2.1
gi|156523264 hypothetical protein LOC112752 isoform 2 [Homo sapi... 28 2.1
gi|156523262 hypothetical protein LOC112752 isoform 1 [Homo sapi... 28 2.1
>gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo
sapiens]
Length = 97
Score = 233 bits (593), Expect = 3e-62
Identities = 97/97 (100%), Positives = 97/97 (100%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo
sapiens]
Length = 97
Score = 230 bits (586), Expect = 2e-61
Identities = 96/97 (98%), Positives = 96/97 (98%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo
sapiens]
Length = 97
Score = 230 bits (586), Expect = 2e-61
Identities = 96/97 (98%), Positives = 96/97 (98%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo
sapiens]
Length = 97
Score = 230 bits (586), Expect = 2e-61
Identities = 96/97 (98%), Positives = 96/97 (98%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo
sapiens]
Length = 97
Score = 230 bits (586), Expect = 2e-61
Identities = 96/97 (98%), Positives = 96/97 (98%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo
sapiens]
Length = 97
Score = 227 bits (579), Expect = 1e-60
Identities = 95/97 (97%), Positives = 95/97 (97%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo
sapiens]
Length = 97
Score = 227 bits (579), Expect = 1e-60
Identities = 95/97 (97%), Positives = 95/97 (97%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo
sapiens]
Length = 97
Score = 226 bits (576), Expect = 3e-60
Identities = 95/97 (97%), Positives = 95/97 (97%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WNGIKWNGIECNGMLWNGMECIGME PLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMESPLMEWIRVEWN 97
>gi|239747040 PREDICTED: hypothetical protein XP_002344257 [Homo
sapiens]
Length = 97
Score = 224 bits (571), Expect = 1e-59
Identities = 94/97 (96%), Positives = 94/97 (96%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVD IGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDWIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo
sapiens]
Length = 97
Score = 222 bits (566), Expect = 4e-59
Identities = 94/97 (96%), Positives = 94/97 (96%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVE N
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVECN 97
>gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo
sapiens]
Length = 97
Score = 218 bits (554), Expect = 1e-57
Identities = 93/97 (95%), Positives = 94/97 (96%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
NGIKWNGIEC+GMLWNGMECIGMECPLME IRVEWN
Sbjct: 61 CNGIKWNGIECSGMLWNGMECIGMECPLMERIRVEWN 97
>gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo
sapiens]
Length = 134
Score = 67.4 bits (163), Expect = 2e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRSGIKWN 99
Score = 63.9 bits (154), Expect = 3e-11
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
+ W+ GIKW NGIK G+ECN N +EC GM+
Sbjct: 81 IHWNGRECSVMDRSGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
Score = 49.7 bits (117), Expect = 5e-07
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
+WN I WNG+E + +D G WN G++ E NE E N +E NGM +GI+
Sbjct: 77 EWNGIHWNGRECSVMDRSGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
Score = 48.5 bits (114), Expect = 1e-06
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 15/79 (18%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N+++ KE NG++ WN ++W G E + ++R+G++WN +GIK G++
Sbjct: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRSGIKWNATVSNGIKMYGMEC 113
Query: 67 NG-----IECNGMLWNGME 80
N IECNGM NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 79 -----MECIGMECPLMEWIRVEWN 97
MEC E +EW + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84
>gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo
sapiens]
Length = 134
Score = 67.0 bits (162), Expect = 3e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 63.9 bits (154), Expect = 3e-11
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
+ W+ GIKW NGIK G+ECN N +EC GM+
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
+WN I WNG+E + +D G WN G++ E NE E N +E NGM +GI+
Sbjct: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
Score = 47.4 bits (111), Expect = 3e-06
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 15/79 (18%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N+++ KE NG++ WN ++W G E + ++R G++WN +GIK G++
Sbjct: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113
Query: 67 NG-----IECNGMLWNGME 80
N IECNGM NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 79 -----MECIGMECPLMEWIRVEWN 97
MEC E +EW + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84
>gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo
sapiens]
Length = 134
Score = 67.0 bits (162), Expect = 3e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 63.9 bits (154), Expect = 3e-11
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
+ W+ GIKW NGIK G+ECN N +EC GM+
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
+WN I WNG+E + +D G WN G++ E NE E N +E NGM +GI+
Sbjct: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
Score = 47.4 bits (111), Expect = 3e-06
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 15/79 (18%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N+++ KE NG++ WN ++W G E + ++R G++WN +GIK G++
Sbjct: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113
Query: 67 NG-----IECNGMLWNGME 80
N IECNGM NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 79 -----MECIGMECPLMEWIRVEWN 97
MEC E +EW + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84
>gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo
sapiens]
Length = 167
Score = 67.0 bits (162), Expect = 3e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 65.1 bits (157), Expect = 1e-11
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 25/116 (21%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIG---MECPLMEW 91
+ W+ GIKW NGIK G+ECN N +EC G ME +++W
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKMESKIIDW 136
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 79 -----MECIGMECPLMEWIRVEWN 97
MEC E +EW + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 33/91 (36%)
Query: 5 QWNQIKWNGKELNGVDGIGWDWN-------EMY--------------------------W 31
+WN I WNG+E + +D G WN +MY W
Sbjct: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKMESKIIDW 136
Query: 32 KGLEFDETEWNELERNGLEWNGMSWDGIKWN 62
KG + N +E NG+E N + + ++WN
Sbjct: 137 KGWVSKRNDSNGMESNGMEVNRIELNRMEWN 167
>gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo
sapiens]
Length = 155
Score = 67.0 bits (162), Expect = 3e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 65.9 bits (159), Expect = 7e-12
Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 38/134 (28%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIG--------------- 83
+ W+ GIKW NGIK G+ECN N +EC G
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140
Query: 84 -MECPLMEWIRVEW 96
E MEW R+EW
Sbjct: 141 RKELTPMEWNRMEW 154
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 79 -----MECIGMECPLMEWIRVEWN 97
MEC E +EW + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84
>gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo
sapiens]
Length = 134
Score = 67.0 bits (162), Expect = 3e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 63.9 bits (154), Expect = 3e-11
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
+ W+ GIKW NGIK G+ECN N +EC GM+
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
+WN I WNG+E + +D G WN G++ E NE E N +E NGM +GI+
Sbjct: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
Score = 47.4 bits (111), Expect = 3e-06
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 15/79 (18%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N+++ KE NG++ WN ++W G E + ++R G++WN +GIK G++
Sbjct: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113
Query: 67 NG-----IECNGMLWNGME 80
N IECNGM NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 79 -----MECIGMECPLMEWIRVEWN 97
MEC E +EW + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84
>gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo
sapiens]
Length = 134
Score = 67.0 bits (162), Expect = 3e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 63.9 bits (154), Expect = 3e-11
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
+ W+ GIKW NGIK G+ECN N +EC GM+
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
+WN I WNG+E + +D G WN G++ E NE E N +E NGM +GI+
Sbjct: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
Score = 47.4 bits (111), Expect = 3e-06
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 15/79 (18%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
N+++ KE NG++ WN ++W G E + ++R G++WN +GIK G++
Sbjct: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113
Query: 67 NG-----IECNGMLWNGME 80
N IECNGM NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 79 -----MECIGMECPLMEWIRVEWN 97
MEC E +EW + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84
>gi|239755734 PREDICTED: similar to Nanog homeobox isoform 2 [Homo
sapiens]
Length = 289
Score = 35.8 bits (81), Expect = 0.008
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 1 MESNQWNQIKWNGKELNGVDG---IGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWD 57
M+S +W + W K NGV + N W ++ + W+ +N W+ SW+
Sbjct: 148 MKSKRWQKNNWP-KNSNGVTQGCLVNPTGNLPMWSNQTWNNSTWSNQTQNIQSWSNHSWN 206
Query: 58 GIKWNGIKWNGIECNGMLWN 77
W WN N +N
Sbjct: 207 TQTWCTQSWNNQAWNSPFYN 226
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 32.7 bits (73), Expect = 0.064
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 17/57 (29%)
Query: 40 EWNELERNGLEWNGMSWDGIKWNGIKWNGIECNGMLWN--GMECIGMECPLMEWIRV 94
EWN R+ +E N + IKWN +E NG+ WN ME G ++EWIRV
Sbjct: 8 EWN---RHRMESNAII--------IKWNRMESNGVEWNHHQMESSG----IIEWIRV 49
Score = 26.6 bits (57), Expect = 4.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 15/46 (32%)
Query: 1 MESN---QWNQ---------IKWNGKELNGVDGIGWDWNEMYWKGL 34
MESN +WN+ IKWN E NGV+ W+ ++M G+
Sbjct: 1 MESNAIIEWNRHRMESNAIIIKWNRMESNGVE---WNHHQMESSGI 43
>gi|153945816 Nanog homeobox [Homo sapiens]
Length = 305
Score = 30.0 bits (66), Expect = 0.41
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 31 WKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKWNGIECNGMLWN 77
W ++ + W+ +N W+ SW+ W WN N +N
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242
Score = 27.7 bits (60), Expect = 2.1
Identities = 10/42 (23%), Positives = 14/42 (33%)
Query: 26 WNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKWN 67
W+ W + N + WN +W WN WN
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237
Score = 27.7 bits (60), Expect = 2.1
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 26 WNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKWN 67
WN W + W+ N W SW+ WN +N
Sbjct: 201 WNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 1 MESNQ-WNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWN 42
M SNQ WN W+ + N WN W ++ WN
Sbjct: 195 MWSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237
>gi|239755732 PREDICTED: similar to Nanog homeobox isoform 1 [Homo
sapiens]
Length = 305
Score = 30.0 bits (66), Expect = 0.41
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 31 WKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKWNGIECNGMLWN 77
W ++ + W+ +N W+ SW+ W WN N +N
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242
Score = 27.7 bits (60), Expect = 2.1
Identities = 10/42 (23%), Positives = 14/42 (33%)
Query: 26 WNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKWN 67
W+ W + N + WN +W WN WN
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237
Score = 27.7 bits (60), Expect = 2.1
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 26 WNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKWN 67
WN W + W+ N W SW+ WN +N
Sbjct: 201 WNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 1 MESNQ-WNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWN 42
M SNQ WN W+ + N WN W ++ WN
Sbjct: 195 MWSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237
>gi|93102379 low density lipoprotein-related protein 1B precursor
[Homo sapiens]
Length = 4599
Score = 29.6 bits (65), Expect = 0.54
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 14 KELNGVDGIGWDW--NEMYWKGLEFDETEWNELERNG 48
+++ + G+ DW +YW EFDET+ N +G
Sbjct: 1646 RDIQSIRGLAVDWVSRNLYWISSEFDETQINVARLDG 1682
>gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens]
Length = 577
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 13 GKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKWNGIECN 72
G++ G+D G + M +GL+ E +E +E M ++ ++ G+E
Sbjct: 404 GRDPRGIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEAR 463
Query: 73 GM 74
GM
Sbjct: 464 GM 465
>gi|29294615 sweet taste receptor T1r isoform b [Homo sapiens]
Length = 841
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 12 NGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERN----GLEWNG 53
N L+ + I WDWN W + W+ ++ N ++W+G
Sbjct: 442 NRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHG 487
>gi|29294621 sweet taste receptor T1r isoform d [Homo sapiens]
Length = 324
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 12 NGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERN----GLEWNG 53
N L+ + I WDWN W + W+ ++ N ++W+G
Sbjct: 188 NRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHG 233
>gi|29294619 sweet taste receptor T1r isoform c [Homo sapiens]
Length = 587
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 12 NGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERN----GLEWNG 53
N L+ + I WDWN W + W+ ++ N ++W+G
Sbjct: 188 NRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHG 233
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 27.7 bits (60), Expect = 2.1
Identities = 25/106 (23%), Positives = 31/106 (29%), Gaps = 37/106 (34%)
Query: 11 WNGKELNGVDGIGWDWNEM-------YWKGLEFDETEWNELERNGLEWNGM--------- 54
W G V GIG W W G + E W + +G W G
Sbjct: 1258 WAGARAENVVGIG-TWARAGEQASGGLWAGGQTSEGTWAGDKASGGAWTGAENQASGGSW 1316
Query: 55 --------------------SWDGIKWNGIKWNGIECNGMLWNGME 80
SW G + +G+ W G E G W G E
Sbjct: 1317 ALAGNQAIGELWAAGQASDGSWPGGQASGVSWVGEEAIGGSWTGAE 1362
Score = 26.2 bits (56), Expect = 6.0
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 13 GKELNGVDGIGWDWNEMYWKGLEFDETEWN--ELERNGLEWN-------GMSWDGIKWNG 63
G++ +G G +E W G + W E + +G W G W + +
Sbjct: 1276 GEQASGGLWAGGQTSEGTWAGDKASGGAWTGAENQASGGSWALAGNQAIGELWAAGQASD 1335
Query: 64 IKWNGIECNGMLWNGMECIG 83
W G + +G+ W G E IG
Sbjct: 1336 GSWPGGQASGVSWVGEEAIG 1355
>gi|156523264 hypothetical protein LOC112752 isoform 2 [Homo
sapiens]
Length = 208
Score = 27.7 bits (60), Expect = 2.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 20 DGIGWDWNEMYWKGLEFDETEWNELE 45
D +GWDW+ ++ + TEW+ L+
Sbjct: 170 DDVGWDWDHLFTEVSSEVLTEWDPLQ 195
>gi|156523262 hypothetical protein LOC112752 isoform 1 [Homo
sapiens]
Length = 213
Score = 27.7 bits (60), Expect = 2.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 20 DGIGWDWNEMYWKGLEFDETEWNELE 45
D +GWDW+ ++ + TEW+ L+
Sbjct: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.139 0.535
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,534,989
Number of Sequences: 37866
Number of extensions: 184650
Number of successful extensions: 875
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 284
Number of HSP's gapped (non-prelim): 153
length of query: 97
length of database: 18,247,518
effective HSP length: 68
effective length of query: 29
effective length of database: 15,672,630
effective search space: 454506270
effective search space used: 454506270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.