Guide to the Human Genome
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Search of human proteins with 239747038

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo
sapiens]
         (97 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo ...   233   2e-62
gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo ...   233   2e-62
gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo ...   233   2e-62
gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo ...   233   2e-62
gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo ...   231   1e-61
gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo ...   231   1e-61
gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo ...   230   2e-61
gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo ...   229   3e-61
gi|239747040 PREDICTED: hypothetical protein XP_002344257 [Homo ...   228   1e-60
gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo ...   226   4e-60
gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo ...   221   1e-58
gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo ...    67   2e-12
gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo ...    67   3e-12
gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo ...    67   3e-12
gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo ...    67   3e-12
gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo ...    67   3e-12
gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo ...    67   3e-12
gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo ...    67   3e-12
gi|239755734 PREDICTED: similar to Nanog homeobox isoform 2 [Hom...    36   0.008
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]           33   0.064
gi|153945816 Nanog homeobox [Homo sapiens]                             30   0.41 
gi|239755732 PREDICTED: similar to Nanog homeobox isoform 1 [Hom...    30   0.41 
gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens]        29   0.92 
gi|29294615 sweet taste receptor T1r isoform b [Homo sapiens]          28   2.1  
gi|29294621 sweet taste receptor T1r isoform d [Homo sapiens]          28   2.1  
gi|29294619 sweet taste receptor T1r isoform c [Homo sapiens]          28   2.1  
gi|156523264 hypothetical protein LOC112752 isoform 2 [Homo sapi...    28   2.1  
gi|156523262 hypothetical protein LOC112752 isoform 1 [Homo sapi...    28   2.1  
gi|239757861 PREDICTED: similar to armadillo repeat containing, ...    27   2.7  
gi|93102379 low density lipoprotein-related protein 1B precursor...    27   3.5  

>gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo
          sapiens]
          Length = 97

 Score =  233 bits (595), Expect = 2e-62
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
          MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60

Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
          WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97


>gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo
          sapiens]
          Length = 97

 Score =  233 bits (595), Expect = 2e-62
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
          MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60

Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
          WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97


>gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo
          sapiens]
          Length = 97

 Score =  233 bits (595), Expect = 2e-62
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
          MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60

Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
          WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97


>gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo
          sapiens]
          Length = 97

 Score =  233 bits (595), Expect = 2e-62
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
          MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60

Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
          WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97


>gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo
          sapiens]
          Length = 97

 Score =  231 bits (588), Expect = 1e-61
 Identities = 96/97 (98%), Positives = 96/97 (98%)

Query: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
          MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60

Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
          WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97


>gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo
          sapiens]
          Length = 97

 Score =  231 bits (588), Expect = 1e-61
 Identities = 96/97 (98%), Positives = 96/97 (98%)

Query: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
          MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60

Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
          WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97


>gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo
          sapiens]
          Length = 97

 Score =  230 bits (586), Expect = 2e-61
 Identities = 96/97 (98%), Positives = 96/97 (98%)

Query: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
          MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60

Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
          WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97


>gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo
          sapiens]
          Length = 97

 Score =  229 bits (585), Expect = 3e-61
 Identities = 96/97 (98%), Positives = 96/97 (98%)

Query: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
          MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60

Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
          WNGIKWNGIECNGMLWNGMECIGME PLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMESPLMEWIRVEWN 97


>gi|239747040 PREDICTED: hypothetical protein XP_002344257 [Homo
          sapiens]
          Length = 97

 Score =  228 bits (580), Expect = 1e-60
 Identities = 95/97 (97%), Positives = 95/97 (97%)

Query: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
          MESNQWNQIKWNGKELNGVD IGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1  MESNQWNQIKWNGKELNGVDWIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60

Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
          WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97


>gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo
          sapiens]
          Length = 97

 Score =  226 bits (575), Expect = 4e-60
 Identities = 95/97 (97%), Positives = 95/97 (97%)

Query: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
          MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60

Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
          WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVE N
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVECN 97


>gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo
          sapiens]
          Length = 97

 Score =  221 bits (563), Expect = 1e-58
 Identities = 94/97 (96%), Positives = 95/97 (97%)

Query: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
          MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1  MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60

Query: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
           NGIKWNGIEC+GMLWNGMECIGMECPLME IRVEWN
Sbjct: 61 CNGIKWNGIECSGMLWNGMECIGMECPLMERIRVEWN 97


>gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo
          sapiens]
          Length = 134

 Score = 67.4 bits (163), Expect = 2e-12
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)

Query: 7  NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
          N + WNG   N +     + N M +K +E    E N +E NG+E NGM  +G+K   ++ 
Sbjct: 4  NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63

Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
          N +EC     NG+ WNG+   G EC +M+   ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRSGIKWN 99



 Score = 63.9 bits (154), Expect = 3e-11
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)

Query: 1   MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
           MESN       +  +++ NG ELNG++  G   N +    +E +  E    ERNGLEWNG
Sbjct: 21  MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80

Query: 54  MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
           + W+          GIKW     NGIK  G+ECN    N +EC GM+
Sbjct: 81  IHWNGRECSVMDRSGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127



 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 5   QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
           +WN I WNG+E + +D  G  WN     G++ +  E NE E N +E NGM  +GI+
Sbjct: 77  EWNGIHWNGRECSVMDRSGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132



 Score = 48.5 bits (114), Expect = 1e-06
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 15/79 (18%)

Query: 7   NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
           N+++   KE NG++     WN ++W G      E + ++R+G++WN    +GIK  G++ 
Sbjct: 64  NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRSGIKWNATVSNGIKMYGMEC 113

Query: 67  NG-----IECNGMLWNGME 80
           N      IECNGM  NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132



 Score = 38.1 bits (87), Expect = 0.002
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)

Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
          +E NG+ WNGM+           +G+++          NG++ NG+E NGM  NG     
Sbjct: 1  MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60

Query: 79 -----MECIGMECPLMEWIRVEWN 97
               MEC   E   +EW  + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84


>gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo
          sapiens]
          Length = 134

 Score = 67.0 bits (162), Expect = 3e-12
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)

Query: 7  NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
          N + WNG   N +     + N M +K +E    E N +E NG+E NGM  +G+K   ++ 
Sbjct: 4  NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63

Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
          N +EC     NG+ WNG+   G EC +M+   ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99



 Score = 63.9 bits (154), Expect = 3e-11
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)

Query: 1   MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
           MESN       +  +++ NG ELNG++  G   N +    +E +  E    ERNGLEWNG
Sbjct: 21  MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80

Query: 54  MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
           + W+          GIKW     NGIK  G+ECN    N +EC GM+
Sbjct: 81  IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127



 Score = 51.2 bits (121), Expect = 2e-07
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 5   QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
           +WN I WNG+E + +D  G  WN     G++ +  E NE E N +E NGM  +GI+
Sbjct: 77  EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132



 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 15/79 (18%)

Query: 7   NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
           N+++   KE NG++     WN ++W G      E + ++R G++WN    +GIK  G++ 
Sbjct: 64  NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113

Query: 67  NG-----IECNGMLWNGME 80
           N      IECNGM  NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132



 Score = 38.1 bits (87), Expect = 0.002
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)

Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
          +E NG+ WNGM+           +G+++          NG++ NG+E NGM  NG     
Sbjct: 1  MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60

Query: 79 -----MECIGMECPLMEWIRVEWN 97
               MEC   E   +EW  + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84


>gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo
          sapiens]
          Length = 134

 Score = 67.0 bits (162), Expect = 3e-12
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)

Query: 7  NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
          N + WNG   N +     + N M +K +E    E N +E NG+E NGM  +G+K   ++ 
Sbjct: 4  NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63

Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
          N +EC     NG+ WNG+   G EC +M+   ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99



 Score = 63.9 bits (154), Expect = 3e-11
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)

Query: 1   MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
           MESN       +  +++ NG ELNG++  G   N +    +E +  E    ERNGLEWNG
Sbjct: 21  MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80

Query: 54  MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
           + W+          GIKW     NGIK  G+ECN    N +EC GM+
Sbjct: 81  IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127



 Score = 51.2 bits (121), Expect = 2e-07
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 5   QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
           +WN I WNG+E + +D  G  WN     G++ +  E NE E N +E NGM  +GI+
Sbjct: 77  EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132



 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 15/79 (18%)

Query: 7   NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
           N+++   KE NG++     WN ++W G      E + ++R G++WN    +GIK  G++ 
Sbjct: 64  NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113

Query: 67  NG-----IECNGMLWNGME 80
           N      IECNGM  NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132



 Score = 38.1 bits (87), Expect = 0.002
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)

Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
          +E NG+ WNGM+           +G+++          NG++ NG+E NGM  NG     
Sbjct: 1  MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60

Query: 79 -----MECIGMECPLMEWIRVEWN 97
               MEC   E   +EW  + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84


>gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo
          sapiens]
          Length = 167

 Score = 67.0 bits (162), Expect = 3e-12
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)

Query: 7  NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
          N + WNG   N +     + N M +K +E    E N +E NG+E NGM  +G+K   ++ 
Sbjct: 4  NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63

Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
          N +EC     NG+ WNG+   G EC +M+   ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99



 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 25/116 (21%)

Query: 1   MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
           MESN       +  +++ NG ELNG++  G   N +    +E +  E    ERNGLEWNG
Sbjct: 21  MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80

Query: 54  MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIG---MECPLMEW 91
           + W+          GIKW     NGIK  G+ECN    N +EC G   ME  +++W
Sbjct: 81  IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKMESKIIDW 136



 Score = 38.1 bits (87), Expect = 0.002
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)

Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
          +E NG+ WNGM+           +G+++          NG++ NG+E NGM  NG     
Sbjct: 1  MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60

Query: 79 -----MECIGMECPLMEWIRVEWN 97
               MEC   E   +EW  + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84



 Score = 38.1 bits (87), Expect = 0.002
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 33/91 (36%)

Query: 5   QWNQIKWNGKELNGVDGIGWDWN-------EMY--------------------------W 31
           +WN I WNG+E + +D  G  WN       +MY                          W
Sbjct: 77  EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKMESKIIDW 136

Query: 32  KGLEFHETEWNELERNGLEWNGMSWDGIKWN 62
           KG      + N +E NG+E N +  + ++WN
Sbjct: 137 KGWVSKRNDSNGMESNGMEVNRIELNRMEWN 167


>gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo
          sapiens]
          Length = 155

 Score = 67.0 bits (162), Expect = 3e-12
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)

Query: 7  NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
          N + WNG   N +     + N M +K +E    E N +E NG+E NGM  +G+K   ++ 
Sbjct: 4  NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63

Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
          N +EC     NG+ WNG+   G EC +M+   ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99



 Score = 65.9 bits (159), Expect = 7e-12
 Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 38/134 (28%)

Query: 1   MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
           MESN       +  +++ NG ELNG++  G   N +    +E +  E    ERNGLEWNG
Sbjct: 21  MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80

Query: 54  MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIG--------------- 83
           + W+          GIKW     NGIK  G+ECN    N +EC G               
Sbjct: 81  IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140

Query: 84  -MECPLMEWIRVEW 96
             E   MEW R+EW
Sbjct: 141 RKELTPMEWNRMEW 154



 Score = 38.1 bits (87), Expect = 0.002
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)

Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
          +E NG+ WNGM+           +G+++          NG++ NG+E NGM  NG     
Sbjct: 1  MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60

Query: 79 -----MECIGMECPLMEWIRVEWN 97
               MEC   E   +EW  + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84


>gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo
          sapiens]
          Length = 134

 Score = 67.0 bits (162), Expect = 3e-12
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)

Query: 7  NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
          N + WNG   N +     + N M +K +E    E N +E NG+E NGM  +G+K   ++ 
Sbjct: 4  NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63

Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
          N +EC     NG+ WNG+   G EC +M+   ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99



 Score = 63.9 bits (154), Expect = 3e-11
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)

Query: 1   MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
           MESN       +  +++ NG ELNG++  G   N +    +E +  E    ERNGLEWNG
Sbjct: 21  MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80

Query: 54  MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
           + W+          GIKW     NGIK  G+ECN    N +EC GM+
Sbjct: 81  IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127



 Score = 51.2 bits (121), Expect = 2e-07
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 5   QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
           +WN I WNG+E + +D  G  WN     G++ +  E NE E N +E NGM  +GI+
Sbjct: 77  EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132



 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 15/79 (18%)

Query: 7   NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
           N+++   KE NG++     WN ++W G      E + ++R G++WN    +GIK  G++ 
Sbjct: 64  NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113

Query: 67  NG-----IECNGMLWNGME 80
           N      IECNGM  NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132



 Score = 38.1 bits (87), Expect = 0.002
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)

Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
          +E NG+ WNGM+           +G+++          NG++ NG+E NGM  NG     
Sbjct: 1  MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60

Query: 79 -----MECIGMECPLMEWIRVEWN 97
               MEC   E   +EW  + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84


>gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo
          sapiens]
          Length = 134

 Score = 67.0 bits (162), Expect = 3e-12
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)

Query: 7  NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
          N + WNG   N +     + N M +K +E    E N +E NG+E NGM  +G+K   ++ 
Sbjct: 4  NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63

Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
          N +EC     NG+ WNG+   G EC +M+   ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99



 Score = 63.9 bits (154), Expect = 3e-11
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)

Query: 1   MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
           MESN       +  +++ NG ELNG++  G   N +    +E +  E    ERNGLEWNG
Sbjct: 21  MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80

Query: 54  MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
           + W+          GIKW     NGIK  G+ECN    N +EC GM+
Sbjct: 81  IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127



 Score = 51.2 bits (121), Expect = 2e-07
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 5   QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
           +WN I WNG+E + +D  G  WN     G++ +  E NE E N +E NGM  +GI+
Sbjct: 77  EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132



 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 15/79 (18%)

Query: 7   NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
           N+++   KE NG++     WN ++W G      E + ++R G++WN    +GIK  G++ 
Sbjct: 64  NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113

Query: 67  NG-----IECNGMLWNGME 80
           N      IECNGM  NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132



 Score = 38.1 bits (87), Expect = 0.002
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)

Query: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
          +E NG+ WNGM+           +G+++          NG++ NG+E NGM  NG     
Sbjct: 1  MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60

Query: 79 -----MECIGMECPLMEWIRVEWN 97
               MEC   E   +EW  + WN
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWN 84


>gi|239755734 PREDICTED: similar to Nanog homeobox isoform 2 [Homo
           sapiens]
          Length = 289

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 1   MESNQWNQIKWNGKELNGVDG---IGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWD 57
           M+S +W +  W  K  NGV     +    N   W    ++ + W+   +N   W+  SW+
Sbjct: 148 MKSKRWQKNNWP-KNSNGVTQGCLVNPTGNLPMWSNQTWNNSTWSNQTQNIQSWSNHSWN 206

Query: 58  GIKWNGIKWNGIECNGMLWN 77
              W    WN    N   +N
Sbjct: 207 TQTWCTQSWNNQAWNSPFYN 226


>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 296

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 17/57 (29%)

Query: 40 EWNELERNGLEWNGMSWDGIKWNGIKWNGIECNGMLWN--GMECIGMECPLMEWIRV 94
          EWN   R+ +E N +         IKWN +E NG+ WN   ME  G    ++EWIRV
Sbjct: 8  EWN---RHRMESNAII--------IKWNRMESNGVEWNHHQMESSG----IIEWIRV 49



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 15/46 (32%)

Query: 1  MESN---QWNQ---------IKWNGKELNGVDGIGWDWNEMYWKGL 34
          MESN   +WN+         IKWN  E NGV+   W+ ++M   G+
Sbjct: 1  MESNAIIEWNRHRMESNAIIIKWNRMESNGVE---WNHHQMESSGI 43


>gi|153945816 Nanog homeobox [Homo sapiens]
          Length = 305

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 11/47 (23%), Positives = 19/47 (40%)

Query: 31  WKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKWNGIECNGMLWN 77
           W    ++ + W+   +N   W+  SW+   W    WN    N   +N
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242



 Score = 27.7 bits (60), Expect = 2.1
 Identities = 11/42 (26%), Positives = 15/42 (35%)

Query: 26  WNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKWN 67
           WN   W     +   W+    N   W   SW+   WN   +N
Sbjct: 201 WNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 10/42 (23%), Positives = 14/42 (33%)

Query: 26  WNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKWN 67
           W+   W    +     N    +   WN  +W    WN   WN
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 1   MESNQ-WNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWN 42
           M SNQ WN   W+ +  N        WN   W    ++   WN
Sbjct: 195 MWSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237


>gi|239755732 PREDICTED: similar to Nanog homeobox isoform 1 [Homo
           sapiens]
          Length = 305

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 11/47 (23%), Positives = 19/47 (40%)

Query: 31  WKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKWNGIECNGMLWN 77
           W    ++ + W+   +N   W+  SW+   W    WN    N   +N
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242



 Score = 27.7 bits (60), Expect = 2.1
 Identities = 11/42 (26%), Positives = 15/42 (35%)

Query: 26  WNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKWN 67
           WN   W     +   W+    N   W   SW+   WN   +N
Sbjct: 201 WNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 10/42 (23%), Positives = 14/42 (33%)

Query: 26  WNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKWN 67
           W+   W    +     N    +   WN  +W    WN   WN
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 1   MESNQ-WNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWN 42
           M SNQ WN   W+ +  N        WN   W    ++   WN
Sbjct: 195 MWSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237


>gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens]
          Length = 577

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 15/62 (24%), Positives = 28/62 (45%)

Query: 13  GKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKWNGIECN 72
           G++  G+D  G +   M  +GL+    E   +E   +E   M    ++   ++  G+E  
Sbjct: 404 GRDPRGIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEAR 463

Query: 73  GM 74
           GM
Sbjct: 464 GM 465


>gi|29294615 sweet taste receptor T1r isoform b [Homo sapiens]
          Length = 841

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 12  NGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERN----GLEWNG 53
           N   L+  + I WDWN   W       + W+ ++ N     ++W+G
Sbjct: 442 NRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHG 487


>gi|29294621 sweet taste receptor T1r isoform d [Homo sapiens]
          Length = 324

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 12  NGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERN----GLEWNG 53
           N   L+  + I WDWN   W       + W+ ++ N     ++W+G
Sbjct: 188 NRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHG 233


>gi|29294619 sweet taste receptor T1r isoform c [Homo sapiens]
          Length = 587

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 12  NGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERN----GLEWNG 53
           N   L+  + I WDWN   W       + W+ ++ N     ++W+G
Sbjct: 188 NRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHG 233


>gi|156523264 hypothetical protein LOC112752 isoform 2 [Homo
           sapiens]
          Length = 208

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 20  DGIGWDWNEMYWKGLEFHETEWNELE 45
           D +GWDW+ ++ +      TEW+ L+
Sbjct: 170 DDVGWDWDHLFTEVSSEVLTEWDPLQ 195


>gi|156523262 hypothetical protein LOC112752 isoform 1 [Homo
           sapiens]
          Length = 213

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 20  DGIGWDWNEMYWKGLEFHETEWNELE 45
           D +GWDW+ ++ +      TEW+ L+
Sbjct: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200


>gi|239757861 PREDICTED: similar to armadillo repeat containing,
            X-linked 4 [Homo sapiens]
          Length = 2382

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 55   SWDGIKWNGIKWNGIECNGMLWNGME 80
            SW G + +G+ W G E  G  W G E
Sbjct: 1337 SWPGGQASGVSWVGEEAIGGSWTGAE 1362



 Score = 25.8 bits (55), Expect = 7.8
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 9/80 (11%)

Query: 13   GKELNGVDGIGWDWNEMYWKGLEFHETEWN--ELERNGLEWN-------GMSWDGIKWNG 63
            G++ +G    G   +E  W G +     W   E + +G  W        G  W   + + 
Sbjct: 1276 GEQASGGLWAGGQTSEGTWAGDKASGGAWTGAENQASGGSWALAGNQAIGELWAAGQASD 1335

Query: 64   IKWNGIECNGMLWNGMECIG 83
              W G + +G+ W G E IG
Sbjct: 1336 GSWPGGQASGVSWVGEEAIG 1355


>gi|93102379 low density lipoprotein-related protein 1B precursor
            [Homo sapiens]
          Length = 4599

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 14   KELNGVDGIGWDW--NEMYWKGLEFHETEWNELERNG 48
            +++  + G+  DW    +YW   EF ET+ N    +G
Sbjct: 1646 RDIQSIRGLAVDWVSRNLYWISSEFDETQINVARLDG 1682


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.139    0.538 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,556,833
Number of Sequences: 37866
Number of extensions: 185335
Number of successful extensions: 874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 287
Number of HSP's gapped (non-prelim): 150
length of query: 97
length of database: 18,247,518
effective HSP length: 68
effective length of query: 29
effective length of database: 15,672,630
effective search space: 454506270
effective search space used: 454506270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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