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Search of human proteins with 116875763
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116875763 RAB6C, member RAS oncogene family [Homo sapiens]
(254 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116875763 RAB6C, member RAS oncogene family [Homo sapiens] 506 e-144
gi|117938299 RAB6C-like [Homo sapiens] 502 e-142
gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo sa... 373 e-103
gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo sa... 369 e-102
gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens] 346 1e-95
gi|74096429 RAB41, member RAS oncogene family [Homo sapiens] 229 2e-60
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens] 152 4e-37
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 149 3e-36
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 149 3e-36
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens] 145 4e-35
gi|33589861 RAB31, member RAS oncogene family [Homo sapiens] 139 2e-33
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 136 2e-32
gi|16933567 mel transforming oncogene [Homo sapiens] 135 3e-32
gi|50234889 RAB43 protein [Homo sapiens] 134 8e-32
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens] 133 2e-31
gi|10190714 RAS-related protein RAB-22A [Homo sapiens] 131 5e-31
gi|7661922 RAB21, member RAS oncogene family [Homo sapiens] 131 6e-31
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens] 130 1e-30
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 130 1e-30
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens] 129 2e-30
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 128 5e-30
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 127 9e-30
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 127 9e-30
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 127 9e-30
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 126 2e-29
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 125 4e-29
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 125 4e-29
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 125 5e-29
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens] 124 6e-29
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 124 6e-29
>gi|116875763 RAB6C, member RAS oncogene family [Homo sapiens]
Length = 254
Score = 506 bits (1303), Expect = e-144
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG 60
MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG 60
Query: 61 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
Sbjct: 61 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 121 ITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST 180
ITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST
Sbjct: 121 ITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST 180
Query: 181 QDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKPPYSFIDCSVNIGLNLFPSL 240
QDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKPPYSFIDCSVNIGLNLFPSL
Sbjct: 181 QDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKPPYSFIDCSVNIGLNLFPSL 240
Query: 241 ITFCNSSLLPVSWR 254
ITFCNSSLLPVSWR
Sbjct: 241 ITFCNSSLLPVSWR 254
>gi|117938299 RAB6C-like [Homo sapiens]
Length = 254
Score = 502 bits (1292), Expect = e-142
Identities = 251/254 (98%), Positives = 253/254 (99%)
Query: 1 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG 60
MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG 60
Query: 61 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTE GSDVI
Sbjct: 61 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVI 120
Query: 121 ITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST 180
ITLVGN+TDLADKRQVS+EEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST
Sbjct: 121 ITLVGNKTDLADKRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST 180
Query: 181 QDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKPPYSFIDCSVNIGLNLFPSL 240
QDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKPPYSFIDCSVNIGLNLFPSL
Sbjct: 181 QDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKPPYSFIDCSVNIGLNLFPSL 240
Query: 241 ITFCNSSLLPVSWR 254
ITFCNSSLLPVSWR
Sbjct: 241 ITFCNSSLLPVSWR 254
>gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo
sapiens]
Length = 208
Score = 373 bits (957), Expect = e-103
Identities = 190/208 (91%), Positives = 193/208 (92%)
Query: 1 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG 60
MS GGDFGNPLRKFKLVFLGEQSV KTSLITRF YDSFDNTYQA IGIDFLSKTMYLED
Sbjct: 1 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 61 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
TI L+LWDTAGQER RSLIP YIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 121 ITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST 180
I LVGN+TDLADKRQVS+EEGERKAK LNV FIET AKAGYNVKQLFRRVAAALPGMEST
Sbjct: 121 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST 180
Query: 181 QDGSREDMSDIKLEKPQEQTVSEGGCSC 208
QD SREDM DIKLEKPQEQ VSEGGCSC
Sbjct: 181 QDRSREDMIDIKLEKPQEQPVSEGGCSC 208
>gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo
sapiens]
Length = 208
Score = 369 bits (948), Expect = e-102
Identities = 187/208 (89%), Positives = 191/208 (91%)
Query: 1 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG 60
MS GGDFGNPLRKFKLVFLGEQSV KTSLITRF YDSFDNTYQA IGIDFLSKTMYLED
Sbjct: 1 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 61 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
T+ L+LWDTAGQER RSLIP YIRDS AVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
Sbjct: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 121 ITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST 180
I LVGN+TDLADKRQVS+EEGERKAK LNV FIET AKAGYNVKQLFRRVAAALPGMEST
Sbjct: 121 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST 180
Query: 181 QDGSREDMSDIKLEKPQEQTVSEGGCSC 208
QD SREDM DIKLEKPQEQ VSEGGCSC
Sbjct: 181 QDRSREDMIDIKLEKPQEQPVSEGGCSC 208
>gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
Length = 208
Score = 346 bits (887), Expect = 1e-95
Identities = 171/208 (82%), Positives = 187/208 (89%)
Query: 1 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG 60
MSAGGDFGNPLRKFKLVFLGEQSV KTSLITRF YDSFDNTYQA IGIDFLSKTMYLED
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 61 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
T+ L+LWDTAGQER RSLIP YIRDS AVVVYDITN+NSFQQT+KWIDDVRTERGSDVI
Sbjct: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI 120
Query: 121 ITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST 180
I LVGN+TDLADKRQ+++EEGE++AK L+V FIET AK GYNVKQLFRRVA+ALPGME+
Sbjct: 121 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV 180
Query: 181 QDGSREDMSDIKLEKPQEQTVSEGGCSC 208
Q+ S+E M DIKL+KPQE SEGGCSC
Sbjct: 181 QEKSKEGMIDIKLDKPQEPPASEGGCSC 208
>gi|74096429 RAB41, member RAS oncogene family [Homo sapiens]
Length = 222
Score = 229 bits (584), Expect = 2e-60
Identities = 118/188 (62%), Positives = 144/188 (76%), Gaps = 1/188 (0%)
Query: 11 LRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTA 70
L K KL+FLGEQSV KTS+I+RF Y+SF QA +GIDFLSKTMYLED + L+LWDTA
Sbjct: 29 LCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 88
Query: 71 GQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDL 130
GQER SLIP YIRDS AVVVYDITN+NSF++T KW++ VR ERG DV+I L+GN+ DL
Sbjct: 89 GQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDL 148
Query: 131 ADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMSD 190
+KRQV+ E+GE K++ LNV FIET AK GYNVK+LFRRVA+AL T +E +
Sbjct: 149 DNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTR-TSPPPKEGTVE 207
Query: 191 IKLEKPQE 198
I+LE +E
Sbjct: 208 IELESFEE 215
>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 152 bits (383), Expect = 4e-37
Identities = 78/198 (39%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Query: 4 GGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIG 63
G + GN + +FKLV LGE +V K+SL+ RF F ++ IG FL++T+ L+D T+
Sbjct: 11 GPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVK 70
Query: 64 LRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITL 123
+WDTAGQER SL P Y R + AA+VVYDITN SF + W+ +++ + +++I L
Sbjct: 71 FEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIAL 130
Query: 124 VGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDG 183
GN+ DLA+KR V +E + A ++ F+ET AK NV ++F +A LP E G
Sbjct: 131 SGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPG 190
Query: 184 SREDMS-DIKLEKPQEQT 200
+ + L +P + T
Sbjct: 191 ANSARGRGVDLTEPTQPT 208
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 149 bits (375), Expect = 3e-36
Identities = 72/171 (42%), Positives = 107/171 (62%)
Query: 8 GNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLW 67
GN + +FKLV LGE +V K+SL+ RF F ++ IG FL++T+ L+D T+ +W
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 68 DTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNR 127
DTAGQER SL P Y R + AA+VVYDITN ++F + W+ +++ + +++I L GN+
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 128 TDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGME 178
DLA KR V +E + A ++ F+ET AK NV ++F +A LP E
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 149 bits (375), Expect = 3e-36
Identities = 72/171 (42%), Positives = 107/171 (62%)
Query: 8 GNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLW 67
GN + +FKLV LGE +V K+SL+ RF F ++ IG FL++T+ L+D T+ +W
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 68 DTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNR 127
DTAGQER SL P Y R + AA+VVYDITN ++F + W+ +++ + +++I L GN+
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 128 TDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGME 178
DLA KR V +E + A ++ F+ET AK NV ++F +A LP E
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 145 bits (365), Expect = 4e-35
Identities = 76/192 (39%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
Query: 13 KFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQ 72
+FKLV LGE +V K+SL+ RF F ++ IG FL++++ L+D T+ +WDTAGQ
Sbjct: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 79
Query: 73 ERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLAD 132
ER SL P Y R + AA+VVYDITN +F + W+ +++ + ++I L GN+ DLA+
Sbjct: 80 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLAN 139
Query: 133 KRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMS-DI 191
KR V EE + A ++ F+ET AK NV LF +A LP E G S +
Sbjct: 140 KRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGV 199
Query: 192 KLEKPQEQTVSE 203
L + +Q S+
Sbjct: 200 DLHEQSQQNKSQ 211
>gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]
Length = 195
Score = 139 bits (350), Expect = 2e-33
Identities = 67/189 (35%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Query: 11 LRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTA 70
+R+ K+ LG+ V K+S++ RF D FD+ IG F++KT+ + +WDTA
Sbjct: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
Query: 71 GQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDL 130
GQER SL P Y R SAAAV+VYDIT +SF KW+ +++ ++++ + GN+ DL
Sbjct: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
Query: 131 ADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMSD 190
+D R+V +++ + A+ + +ET AK N+++LF+ ++ +P ++ ++G+
Sbjct: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNN---GT 180
Query: 191 IKLEKPQEQ 199
IK+EKP Q
Sbjct: 181 IKVEKPTMQ 189
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 136 bits (342), Expect = 2e-32
Identities = 68/158 (43%), Positives = 99/158 (62%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G+ V KT L+ RF D+F+ T+ + IGIDF +T+ L+ I L++WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R R++ Y R + ++VYDITN SF WI ++ SDV ++GN+ D+ DK
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDK 128
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVA 171
RQVS E GE+ A + F+ET AK+ NV++ F +A
Sbjct: 129 RQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLA 166
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 135 bits (341), Expect = 3e-32
Identities = 74/196 (37%), Positives = 115/196 (58%), Gaps = 3/196 (1%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G+ V KT ++ RF D+F++T+ + IGIDF +T+ L+ I L++WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R R++ Y R + ++VYDITN SF WI ++ +DV ++GN+ D+ DK
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDK 128
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPG-MESTQDGSREDMSD-- 190
RQVS E GE+ A + F+ET AKA NV+ F +A + M+ +G+ S+
Sbjct: 129 RQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQG 188
Query: 191 IKLEKPQEQTVSEGGC 206
+K+ Q++ S C
Sbjct: 189 VKITPDQQKRSSFFRC 204
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 134 bits (337), Expect = 8e-32
Identities = 74/197 (37%), Positives = 115/197 (58%), Gaps = 5/197 (2%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKLV +G+ SV KT ++ RF+ +F + IG+DF KT+ ++ + L++WDTAGQE
Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 78
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R R++ Y R + A++ YDIT +SF WI+DVR GS+++ L+GN++DL++
Sbjct: 79 RFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSEL 138
Query: 134 RQVSVEEGERKAKGLNV-TFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMSDIK 192
R+VS+ E + A+ ++ IET AK NV++ F RVA L S + I+
Sbjct: 139 REVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLFSEKSPDHIQ 198
Query: 193 LEKPQEQTVSEG-GCSC 208
L + + EG GC C
Sbjct: 199 L---NSKDIGEGWGCGC 212
>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 133 bits (334), Expect = 2e-31
Identities = 74/204 (36%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G SV KTS + R+ DSF + + +GIDF KT+Y D I L++WDTAGQE
Sbjct: 23 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQE 82
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R R++ Y R + +++YDI N SF W ++T + + LVGN+ DL D+
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDE 142
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAAL---------PGMESTQDGS 184
R V E+G R A L F E AK NVKQ+F R+ + P S +G
Sbjct: 143 RVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESLEPSSSSGSNGK 202
Query: 185 REDMSDIKLEKPQEQTVSEGGCSC 208
+ D +P CSC
Sbjct: 203 GPAVGDAPAPQP-------SSCSC 219
>gi|10190714 RAS-related protein RAB-22A [Homo sapiens]
Length = 194
Score = 131 bits (330), Expect = 5e-31
Identities = 61/169 (36%), Positives = 99/169 (58%)
Query: 11 LRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTA 70
LR+ K+ LG+ V K+S++ RF DSFD IG F++KT+ ++ +WDTA
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 71 GQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDL 130
GQER R+L P Y R SAAA++VYDIT +F W+ ++R ++++ + GN+ DL
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 131 ADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMES 179
D R+V + + A ++ F+ET AK N+ +LF ++ +P ++
Sbjct: 123 IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDA 171
>gi|7661922 RAB21, member RAS oncogene family [Homo sapiens]
Length = 225
Score = 131 bits (329), Expect = 6e-31
Identities = 72/204 (35%), Positives = 113/204 (55%), Gaps = 10/204 (4%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FK+V LGE V KTSL+ R+ + F++ + + FL+K + + + L +WDTAGQE
Sbjct: 20 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQE 79
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R +L P Y RDS A++VYDIT+ +SFQ+ W+ ++R G+++ + +VGN+ DL +
Sbjct: 80 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKE 139
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLF----------RRVAAALPGMESTQDG 183
R VS++E E A+ + T AK +++LF +V G S+Q G
Sbjct: 140 RHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPG 199
Query: 184 SREDMSDIKLEKPQEQTVSEGGCS 207
+ I ++PQ QT G CS
Sbjct: 200 TARRGVQIIDDEPQAQTSGGGCCS 223
>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
Length = 227
Score = 130 bits (327), Expect = 1e-30
Identities = 63/157 (40%), Positives = 93/157 (59%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G SV KTS + R+ DSF + + + +GIDF KT++ + I L++WDTAGQE
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQE 90
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R R++ Y R + +++YDITN SF W ++T + + LVGN+ D+ D+
Sbjct: 91 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDE 150
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRV 170
R +S E G+ + L F ET AK NVKQ F R+
Sbjct: 151 RVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERL 187
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 130 bits (326), Expect = 1e-30
Identities = 66/182 (36%), Positives = 108/182 (59%), Gaps = 3/182 (1%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G+ V KT LI RF D+F+NTY + IGIDF +T+ +E I L++WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R +++ Y R + ++VYDIT+ SF+ W+ ++ + V L+GN+ D+ K
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAAL---PGMESTQDGSREDMSD 190
R+V E+ ++ A+ + F ET AK+ NV + F +A + G + +G++ +D
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 188
Query: 191 IK 192
+K
Sbjct: 189 LK 190
>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
Length = 220
Score = 129 bits (325), Expect = 2e-30
Identities = 65/157 (41%), Positives = 91/157 (57%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FK++ +G SV KTS + R+ DSF + + +GIDF KT+Y D I L++WDTAGQE
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 82
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R R++ Y R + +++YDITN SF W ++T + + LVGN+ D+ D+
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDE 142
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRV 170
R VS E G + A L F E AK NVKQ F R+
Sbjct: 143 RVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERL 179
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 128 bits (321), Expect = 5e-30
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 8/197 (4%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G+ V K+ L+ RF D++ +Y + IG+DF +T+ L+ TI L++WDTAGQE
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R R++ Y R + +VVYD+T+ SF +W+ ++ +V LVGN+ DL K
Sbjct: 72 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTK 131
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALP---GMESTQDGSREDMSD 190
+ V + A L + F+ET AK NV+Q F +AA + G +T G+ + S+
Sbjct: 132 KVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA--EKSN 189
Query: 191 IKLEK-PQEQTVSEGGC 206
+K++ P +Q S GGC
Sbjct: 190 VKIQSTPVKQ--SGGGC 204
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 127 bits (319), Expect = 9e-30
Identities = 65/182 (35%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G+ V KT LI RF D+F+NTY + IGIDF +T+ +E I L++WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R +++ Y R + ++ YDIT+ SF+ W+ + + V L+GN+ D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAAL---PGMESTQDGSREDMSD 190
R+V E+ ++ A+ + F ET AK+ NV + F +A + G + +G++ +D
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 312
Query: 191 IK 192
+K
Sbjct: 313 LK 314
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 127 bits (319), Expect = 9e-30
Identities = 65/182 (35%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G+ V KT LI RF D+F+NTY + IGIDF +T+ +E I L++WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R +++ Y R + ++ YDIT+ SF+ W+ + + V L+GN+ D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAAL---PGMESTQDGSREDMSD 190
R+V E+ ++ A+ + F ET AK+ NV + F +A + G + +G++ +D
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 312
Query: 191 IK 192
+K
Sbjct: 313 LK 314
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 127 bits (319), Expect = 9e-30
Identities = 65/182 (35%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G+ V KT LI RF D+F+NTY + IGIDF +T+ +E I L++WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R +++ Y R + ++ YDIT+ SF+ W+ + + V L+GN+ D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAAL---PGMESTQDGSREDMSD 190
R+V E+ ++ A+ + F ET AK+ NV + F +A + G + +G++ +D
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 312
Query: 191 IK 192
+K
Sbjct: 313 LK 314
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 126 bits (316), Expect = 2e-29
Identities = 65/173 (37%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Query: 3 AGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSF-DNTYQAIIGIDFLSKTMYLEDGT 61
AG DF + + K + +G+ V KTSL+ +F F ++ A +GI F +K + ++
Sbjct: 13 AGPDFNDHVLH-KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVR 71
Query: 62 IGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
+ L++WDTAGQER RS+ Y RD+ A +++YDITN +SF W+ ++ DV+I
Sbjct: 72 VKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVI 131
Query: 122 TLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAAL 174
L+GN+ D++ +R + E+GE A+ V F+ET AK G NV+ F +A L
Sbjct: 132 MLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 125 bits (314), Expect = 4e-29
Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 1/161 (0%)
Query: 15 KLVFLGEQSVAKTSLITRFRYDSF-DNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
K++ LG+ V KT + +F+ +F T+ A +GIDF +K + ++ + L++WDTAGQE
Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R RS+ Y RD+ A +++YDITN +SF W+ ++ DV+I L+GN+ D++ +
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE 150
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAAL 174
R + E+GE A+ V F+ET AK G NV+ F +A L
Sbjct: 151 RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 125 bits (314), Expect = 4e-29
Identities = 63/158 (39%), Positives = 97/158 (61%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G+ V KT ++ RF D+F+ T+ + IGIDF KT+ L+ I L++WDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R ++ Y R + ++VYDITN SF+ +KW+ ++ DV L+GN+ D+ DK
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVA 171
R V +G + A+ + F ET AKA N+++ F +A
Sbjct: 130 RVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLA 167
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 125 bits (313), Expect = 5e-29
Identities = 64/193 (33%), Positives = 106/193 (54%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G+ V K+ L+ RF D++ +Y + IG+DF +T+ L+ TI L++WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R R++ Y R + +VVYD+T+ S+ +W+ ++ +V LVGN++DL K
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTK 128
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMSDIKL 193
+ V + A L + F+ET AK NV+Q F +AA + S + ++K+
Sbjct: 129 KVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKI 188
Query: 194 EKPQEQTVSEGGC 206
+ + G C
Sbjct: 189 DSTPVKPAGGGCC 201
>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 124 bits (312), Expect = 6e-29
Identities = 60/161 (37%), Positives = 94/161 (58%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FKL+ +G SV KTS + R+ D+F + + +GIDF KT+Y + + L++WDTAGQE
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQE 82
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
R R++ Y R + +++YDITN SF W ++T + + LVGN+ D+ ++
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEE 142
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAAL 174
R V E+G+ A+ L F E AK +V+Q F R+ A+
Sbjct: 143 RVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAI 183
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 124 bits (312), Expect = 6e-29
Identities = 62/170 (36%), Positives = 101/170 (59%), Gaps = 2/170 (1%)
Query: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQE 73
FK + +G+ V K+ L+ +F F + IG++F ++ + ++ I L++WDTAGQE
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
Query: 74 RLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADK 133
RS+ Y R +A A++VYDIT ++F T W++D R S+++I L+GN++DL +
Sbjct: 67 SFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 126
Query: 134 RQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDG 183
R+V EEGE A+ + F+ET AK NV++ F A + E Q+G
Sbjct: 127 REVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI--YEKIQEG 174
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,800,623
Number of Sequences: 37866
Number of extensions: 349196
Number of successful extensions: 1339
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 1035
Number of HSP's gapped (non-prelim): 238
length of query: 254
length of database: 18,247,518
effective HSP length: 100
effective length of query: 154
effective length of database: 14,460,918
effective search space: 2226981372
effective search space used: 2226981372
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.