BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239746747 PREDICTED: hypothetical protein XP_002343823 [Homo sapiens] (260 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239746747 PREDICTED: hypothetical protein XP_002343823 [Homo ... 533 e-152 gi|60460889 Myb protein P42POP [Homo sapiens] 38 0.008 gi|4885455 SH2B adaptor protein 3 [Homo sapiens] 35 0.086 gi|193083191 synaptopodin 2 isoform c [Homo sapiens] 34 0.11 gi|193083185 synaptopodin 2 isoform b [Homo sapiens] 34 0.11 gi|193083183 synaptopodin 2 isoform a [Homo sapiens] 34 0.11 gi|4506143 neurotrypsin precursor [Homo sapiens] 33 0.19 gi|14249622 ajuba isoform 1 [Homo sapiens] 33 0.25 gi|95089461 discs large homolog 5 [Homo sapiens] 33 0.33 gi|19924103 synapsin II isoform IIa [Homo sapiens] 33 0.33 gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 33 0.33 gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 33 0.33 gi|210032580 SET domain containing 1B [Homo sapiens] 33 0.33 gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 32 0.42 gi|156416026 zinc finger protein 219 [Homo sapiens] 32 0.42 gi|148727370 immediate early response 5-like [Homo sapiens] 32 0.42 gi|156415998 zinc finger protein 219 [Homo sapiens] 32 0.42 gi|156415996 zinc finger protein 219 [Homo sapiens] 32 0.42 gi|5454140 tumor susceptibility gene 101 [Homo sapiens] 32 0.55 gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 32 0.55 gi|33350928 disabled homolog 1 [Homo sapiens] 32 0.72 gi|18079216 CASK interacting protein 1 [Homo sapiens] 31 0.95 gi|50345997 E1A binding protein p300 [Homo sapiens] 31 0.95 gi|169217230 PREDICTED: similar to hCG2044193 [Homo sapiens] 31 0.95 gi|239757070 PREDICTED: hypothetical protein [Homo sapiens] 31 0.95 gi|169216426 PREDICTED: similar to hCG2044193 [Homo sapiens] 31 0.95 gi|239751580 PREDICTED: hypothetical protein [Homo sapiens] 31 0.95 gi|169216870 PREDICTED: hypothetical protein LOC100129520 [Homo ... 31 0.95 gi|239746092 PREDICTED: hypothetical protein XP_002343656 [Homo ... 31 0.95 gi|7662302 TBK1 binding protein 1 [Homo sapiens] 31 0.95 >gi|239746747 PREDICTED: hypothetical protein XP_002343823 [Homo sapiens] Length = 260 Score = 533 bits (1374), Expect = e-152 Identities = 260/260 (100%), Positives = 260/260 (100%) Query: 1 MGLFCRRPKASRTPSPYLGLVLQVQGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWACSA 60 MGLFCRRPKASRTPSPYLGLVLQVQGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWACSA Sbjct: 1 MGLFCRRPKASRTPSPYLGLVLQVQGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWACSA 60 Query: 61 AGQRPPAPPAHTLVLSFKSRDSMGLFCRRPKASRTPSPYLGLVLQVQGLHGLVLPPAKGL 120 AGQRPPAPPAHTLVLSFKSRDSMGLFCRRPKASRTPSPYLGLVLQVQGLHGLVLPPAKGL Sbjct: 61 AGQRPPAPPAHTLVLSFKSRDSMGLFCRRPKASRTPSPYLGLVLQVQGLHGLVLPPAKGL 120 Query: 121 QQVVIVGGQDHGAPVHQAEDRLQHHRTPDVLLQVVKHLHQAVLEEAGLGIACALQKGDIF 180 QQVVIVGGQDHGAPVHQAEDRLQHHRTPDVLLQVVKHLHQAVLEEAGLGIACALQKGDIF Sbjct: 121 QQVVIVGGQDHGAPVHQAEDRLQHHRTPDVLLQVVKHLHQAVLEEAGLGIACALQKGDIF 180 Query: 181 RIRSWATTNRSRSFVTFLRNSATSPGCSTSSCSAASMTASMQLLHEQRAGIPGATAALTP 240 RIRSWATTNRSRSFVTFLRNSATSPGCSTSSCSAASMTASMQLLHEQRAGIPGATAALTP Sbjct: 181 RIRSWATTNRSRSFVTFLRNSATSPGCSTSSCSAASMTASMQLLHEQRAGIPGATAALTP 240 Query: 241 VLKNECAHSRETLDEVNEAA 260 VLKNECAHSRETLDEVNEAA Sbjct: 241 VLKNECAHSRETLDEVNEAA 260 >gi|60460889 Myb protein P42POP [Homo sapiens] Length = 399 Score = 38.1 bits (87), Expect = 0.008 Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 9/77 (11%) Query: 5 CRRPKASRTPSPYLGLVLQVQGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAGQR 64 C RPK +P P +Q+ L PPA LP P P+ PS P P Sbjct: 194 CPRPKERESPPPSALQPVQLPRLALSPPPPAPPLPPPPPLAQVAPSPPSPP--------- 244 Query: 65 PPAPPAHTLVLSFKSRD 81 PP P TL S S D Sbjct: 245 PPPRPPPTLSASDPSLD 261 >gi|4885455 SH2B adaptor protein 3 [Homo sapiens] Length = 575 Score = 34.7 bits (78), Expect = 0.086 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 33 PPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTLVLSFKSRDSMGLFCRRPKA 92 PPAK P+P P P++PG P A S+ PP PP F R S+ RR A Sbjct: 96 PPAKAEASPEPGPG--PAAPGLPKARSSEELAPPRPPGPCSFQHF--RRSLRHIFRRRSA 151 Query: 93 SRTPSPY 99 P+ + Sbjct: 152 GELPAAH 158 >gi|193083191 synaptopodin 2 isoform c [Homo sapiens] Length = 1109 Score = 34.3 bits (77), Expect = 0.11 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 6/91 (6%) Query: 25 QGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTLVLSFKSRDS-- 82 +G+ + PA+ P PQP PWS P+ + ++ +R P T +L R S Sbjct: 634 RGVSSPIAGPAQPPPWPQPAPWSQPAFYDSSERIASRDERISVPAKRTGILQEAKRRSTT 693 Query: 83 --MGLFCRRPKASRTPSPYLGLVLQVQGLHG 111 M F + PK S P L L+ +G G Sbjct: 694 KPMFTF-KEPKVSPNPE-LLSLLQNSEGKRG 722 >gi|193083185 synaptopodin 2 isoform b [Homo sapiens] Length = 1093 Score = 34.3 bits (77), Expect = 0.11 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 6/91 (6%) Query: 25 QGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTLVLSFKSRDS-- 82 +G+ + PA+ P PQP PWS P+ + ++ +R P T +L R S Sbjct: 634 RGVSSPIAGPAQPPPWPQPAPWSQPAFYDSSERIASRDERISVPAKRTGILQEAKRRSTT 693 Query: 83 --MGLFCRRPKASRTPSPYLGLVLQVQGLHG 111 M F + PK S P L L+ +G G Sbjct: 694 KPMFTF-KEPKVSPNPE-LLSLLQNSEGKRG 722 >gi|193083183 synaptopodin 2 isoform a [Homo sapiens] Length = 1261 Score = 34.3 bits (77), Expect = 0.11 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 6/91 (6%) Query: 25 QGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTLVLSFKSRDS-- 82 +G+ + PA+ P PQP PWS P+ + ++ +R P T +L R S Sbjct: 634 RGVSSPIAGPAQPPPWPQPAPWSQPAFYDSSERIASRDERISVPAKRTGILQEAKRRSTT 693 Query: 83 --MGLFCRRPKASRTPSPYLGLVLQVQGLHG 111 M F + PK S P L L+ +G G Sbjct: 694 KPMFTF-KEPKVSPNPE-LLSLLQNSEGKRG 722 >gi|4506143 neurotrypsin precursor [Homo sapiens] Length = 875 Score = 33.5 bits (75), Expect = 0.19 Identities = 32/109 (29%), Positives = 41/109 (37%), Gaps = 20/109 (18%) Query: 6 RRPKASRTPSPYLGLVLQVQGLHGLVLPPAKDLPH-PQPIPWSCPSSPGTPWA------- 57 +RP +R P P + L P A H P+P PW CP+ G PW Sbjct: 51 QRPPTTRPPPPLPRFPRPPRALPAQ-RPHALQAGHTPRPHPWGCPA--GEPWVSVTDFGA 107 Query: 58 -CSAAGQRPP----APPAHTLVLSFKSRDSMGLFCRRPKASRTPSPYLG 101 C + PP +PPA L R FCR P + P + G Sbjct: 108 PCLRWAEVPPFLERSPPASWAQL----RGQRHNFCRSPDGAGRPWCFYG 152 >gi|14249622 ajuba isoform 1 [Homo sapiens] Length = 538 Score = 33.1 bits (74), Expect = 0.25 Identities = 43/162 (26%), Positives = 58/162 (35%), Gaps = 27/162 (16%) Query: 33 PPAKDLPHPQPIPWSCPSSPGTP--------WACSAAGQRPPAPPAHTLVLSFKSRDSMG 84 PP + LP PQ +P P P + SA+ P+ P +L+L G Sbjct: 94 PPTRALPLPQSLPPDFRLEPTAPALSPRSSFASSSASDASKPSSPRGSLLLDGAGAGGAG 153 Query: 85 LFCRRPKASRTPSPYLGLVLQVQGLHGLVL--------PPAKGLQQVVIVGGQDHGAP-V 135 RP ++RT G+ + HG L PP G GG P + Sbjct: 154 --GSRPCSNRTS----GISMGYDQRHGSPLPAGPCLFGPPLAGAPAGYSPGGVPSAYPEL 207 Query: 136 HQAEDRLQHHRTPDVLLQVVKHLHQAVLEE----AGLGIACA 173 H A DRL R Q +H + L AG G+ A Sbjct: 208 HAALDRLYAQRPAGFGCQESRHSYPPALGSPGALAGAGVGAA 249 >gi|95089461 discs large homolog 5 [Homo sapiens] Length = 1919 Score = 32.7 bits (73), Expect = 0.33 Identities = 64/233 (27%), Positives = 89/233 (38%), Gaps = 38/233 (16%) Query: 6 RRPKASRTPSPYLG-LVLQVQGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAGQR 64 RRPK++ + P L +V+ Q L PA P+ W+ P SPG S+ Sbjct: 1111 RRPKSAPSFRPKLAPVVIPAQFLEEQKCVPASGELSPELQEWA-PYSPGH----SSRHSN 1165 Query: 65 PPAPPAHTLVLSFKSRDSMGLFCRRPKASRTPSPYLGLVLQ--VQGLHGLVLPPAKGLQQ 122 PP P SR S+G R S TPS + +L+ + + + P Sbjct: 1166 PPLYP---------SRPSVGTVPR----SLTPSTTVSSILRNPIYTVRSHRVGPCSSPPA 1212 Query: 123 VVIVGGQD-HGAPVHQAEDRLQ--HHRTPDVLLQVVKHLHQAVLEEAGLGIACALQ-KGD 178 G Q H + HQ L H D H ++ A LG + LQ K + Sbjct: 1213 ARDAGPQGLHPSVQHQGRLSLDLSHRTCSDYSEMRATHGSNSLPSSARLGSSSNLQFKAE 1272 Query: 179 IFRIRSWATTNRSRSFVTFLRNSATSPGCST-----------SSCSAASMTAS 220 RI+ +T RS V R S + CST SSCS + +AS Sbjct: 1273 --RIKIPSTPRYPRSVVGSERGSVSHSECSTPPQSPLNIDTLSSCSQSQTSAS 1323 >gi|19924103 synapsin II isoform IIa [Homo sapiens] Length = 582 Score = 32.7 bits (73), Expect = 0.33 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 9/69 (13%) Query: 8 PKASRTPS---PYLGLVLQVQGLH--GLVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAG 62 P +S+TP P G Q QG+ G VLPP + P P +P PSS + + S+A Sbjct: 443 PDSSKTPPQRPPPQGGPGQPQGMQPPGKVLPPRRLPPGPS-LP---PSSSSSSSSSSSAP 498 Query: 63 QRPPAPPAH 71 QRP P H Sbjct: 499 QRPGGPTTH 507 >gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] Length = 1240 Score = 32.7 bits (73), Expect = 0.33 Identities = 32/104 (30%), Positives = 35/104 (33%), Gaps = 25/104 (24%) Query: 29 GLVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTLVLSFKSRDSMGLFCR 88 G + PPA P P P+P SC P P G PP PP MG Sbjct: 467 GAMAPPAP--PLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPL---------LPGMGWGPP 515 Query: 89 RPKASRTPSPYLGLVLQVQGLHGLVLPPAKGLQQVVIVGGQDHG 132 P P P L PP G + VIV DHG Sbjct: 516 PP-----PPPLLPCTCS---------PPVAGGMEEVIVAQVDHG 545 >gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] Length = 1249 Score = 32.7 bits (73), Expect = 0.33 Identities = 32/104 (30%), Positives = 35/104 (33%), Gaps = 25/104 (24%) Query: 29 GLVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTLVLSFKSRDSMGLFCR 88 G + PPA P P P+P SC P P G PP PP MG Sbjct: 467 GAMAPPAP--PLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPL---------LPGMGWGPP 515 Query: 89 RPKASRTPSPYLGLVLQVQGLHGLVLPPAKGLQQVVIVGGQDHG 132 P P P L PP G + VIV DHG Sbjct: 516 PP-----PPPLLPCTCS---------PPVAGGMEEVIVAQVDHG 545 >gi|210032580 SET domain containing 1B [Homo sapiens] Length = 1923 Score = 32.7 bits (73), Expect = 0.33 Identities = 18/45 (40%), Positives = 18/45 (40%) Query: 30 LVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTLV 74 L LPP P P P P PG P PP PPAH V Sbjct: 679 LPLPPPPGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAHPAV 723 >gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 1124 Score = 32.3 bits (72), Expect = 0.42 Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 8/63 (12%) Query: 8 PKASRTPSPYLGLVLQVQGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPA 67 P + TP P Q L PP + LP P P + P P Q PP+ Sbjct: 584 PSSIATPPP--------QAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPS 635 Query: 68 PPA 70 PPA Sbjct: 636 PPA 638 Score = 28.1 bits (61), Expect = 8.0 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 13 TPSPYLGLVLQVQGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPP---APP 69 TPSP L V L PP P P+S P+SP + + Q PP APP Sbjct: 647 TPSPQAPNALAVHLLQAPFSPPPSP---PVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 703 >gi|156416026 zinc finger protein 219 [Homo sapiens] Length = 722 Score = 32.3 bits (72), Expect = 0.42 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 33 PPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPP 69 P + +P P+P P P TP AA + PPAPP Sbjct: 238 PEPRSVPQPEPEPE--PEREATPTPAPAAPEEPPAPP 272 >gi|148727370 immediate early response 5-like [Homo sapiens] Length = 404 Score = 32.3 bits (72), Expect = 0.42 Identities = 21/44 (47%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 33 PPAKDLPHPQPIPWS-CPSSPGTPWACSA-AGQRPPA----PPA 70 P LP P P P + CP P P ACSA G PPA PPA Sbjct: 182 PAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPA 225 >gi|156415998 zinc finger protein 219 [Homo sapiens] Length = 722 Score = 32.3 bits (72), Expect = 0.42 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 33 PPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPP 69 P + +P P+P P P TP AA + PPAPP Sbjct: 238 PEPRSVPQPEPEPE--PEREATPTPAPAAPEEPPAPP 272 >gi|156415996 zinc finger protein 219 [Homo sapiens] Length = 722 Score = 32.3 bits (72), Expect = 0.42 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 33 PPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPP 69 P + +P P+P P P TP AA + PPAPP Sbjct: 238 PEPRSVPQPEPEPE--PEREATPTPAPAAPEEPPAPP 272 >gi|5454140 tumor susceptibility gene 101 [Homo sapiens] Length = 390 Score = 32.0 bits (71), Expect = 0.55 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 26 GLHGLVLP-PAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTL 73 G+ G + P P+ P+P P CP PG P+ + + Q P PP T+ Sbjct: 166 GMPGGISPYPSGYPPNPSGYP-GCPYPPGGPYPATTSSQYPSQPPVTTV 213 >gi|4826998 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Homo sapiens] Length = 707 Score = 32.0 bits (71), Expect = 0.55 Identities = 37/119 (31%), Positives = 42/119 (35%), Gaps = 15/119 (12%) Query: 33 PPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTLVLSFKSRDSMGLFCRRPKA 92 PP P P P S G P AG PP P A V G PK Sbjct: 153 PPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAA---VPGPGPGPKQGPGPGGPKG 209 Query: 93 SRT---PSPYLGLVLQVQGLHGLVLPPAKGLQQVVIVGGQDHGAPVHQAEDRLQHHRTP 148 + P P G L G H PP +G + GG+ H P HQ QHH+ P Sbjct: 210 GKMPGGPKPGGGPGLSTPGGH--PKPPHRGGGEP--RGGRQHHPPYHQ-----QHHQGP 259 >gi|33350928 disabled homolog 1 [Homo sapiens] Length = 555 Score = 31.6 bits (70), Expect = 0.72 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Query: 21 VLQVQGLHGLVLPPAKDLPHPQPIPWSCPS-SPGT--PWACSAAGQRPPA 67 ++Q Q + G P A+ +P QPI W P P T PW + AGQ PPA Sbjct: 316 LVQQQMVMGAQPPVAQVMPGAQPIAWGQPGLFPATQQPWP-TVAGQFPPA 364 >gi|18079216 CASK interacting protein 1 [Homo sapiens] Length = 1431 Score = 31.2 bits (69), Expect = 0.95 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 3/69 (4%) Query: 8 PKASRTPSPYLGLVLQVQGLHGLVLPPAKDLPHPQPI---PWSCPSSPGTPWACSAAGQR 64 P S P P V+ + GL A P P P P + PGTP + A+ + Sbjct: 1268 PPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAK 1327 Query: 65 PPAPPAHTL 73 PP+P A L Sbjct: 1328 PPSPGAPAL 1336 >gi|50345997 E1A binding protein p300 [Homo sapiens] Length = 2414 Score = 31.2 bits (69), Expect = 0.95 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 6/66 (9%) Query: 8 PKASRTPSPYLGLVLQVQGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWACSAAGQRPPA 67 P SRTP+P+ G PPA +P P P P + P P + A ++ P Sbjct: 834 PVPSRTPTPH-----HTPPSIGAQQPPATTIPAPVPTPPAMPPGPQSQ-ALHPPPRQTPT 887 Query: 68 PPAHTL 73 PP L Sbjct: 888 PPTTQL 893 >gi|169217230 PREDICTED: similar to hCG2044193 [Homo sapiens] Length = 890 Score = 31.2 bits (69), Expect = 0.95 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 17/66 (25%) Query: 14 PSPYLGLVLQVQGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWAC---------SAAGQR 64 P P G +VQG+ L+L A P P+P+ PS G P++ SAA Sbjct: 210 PEPQSG---RVQGMQPLLLMQA-----PHPVPFHMPSPMGLPYSTPLPPPVVMESAAAIA 261 Query: 65 PPAPPA 70 P PPA Sbjct: 262 PQMPPA 267 >gi|239757070 PREDICTED: hypothetical protein [Homo sapiens] Length = 195 Score = 31.2 bits (69), Expect = 0.95 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%) Query: 23 QVQGLHG-LVLPPAKD-LPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTLVLSFKSR 80 ++ G+ G L LP +D PQP+PW PG P C A+G R AP A + K+R Sbjct: 133 RLSGVAGCLPLPRPRDGARSPQPLPWK----PGLPSLCVASGLR-TAPDASAPGRAAKTR 187 Query: 81 DS 82 S Sbjct: 188 SS 189 >gi|169216426 PREDICTED: similar to hCG2044193 [Homo sapiens] Length = 993 Score = 31.2 bits (69), Expect = 0.95 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 17/66 (25%) Query: 14 PSPYLGLVLQVQGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWAC---------SAAGQR 64 P P G +VQG+ L+L A P P+P+ PS G P++ SAA Sbjct: 210 PEPQSG---RVQGMQPLLLMQA-----PHPVPFHMPSPMGLPYSTPLPPPVVMESAAAIA 261 Query: 65 PPAPPA 70 P PPA Sbjct: 262 PQMPPA 267 >gi|239751580 PREDICTED: hypothetical protein [Homo sapiens] Length = 195 Score = 31.2 bits (69), Expect = 0.95 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%) Query: 23 QVQGLHG-LVLPPAKD-LPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTLVLSFKSR 80 ++ G+ G L LP +D PQP+PW PG P C A+G R AP A + K+R Sbjct: 133 RLSGVAGCLPLPRPRDGARSPQPLPWK----PGLPSLCVASGLR-TAPDASAPGRAAKTR 187 Query: 81 DS 82 S Sbjct: 188 SS 189 >gi|169216870 PREDICTED: hypothetical protein LOC100129520 [Homo sapiens] Length = 993 Score = 31.2 bits (69), Expect = 0.95 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 17/66 (25%) Query: 14 PSPYLGLVLQVQGLHGLVLPPAKDLPHPQPIPWSCPSSPGTPWAC---------SAAGQR 64 P P G +VQG+ L+L A P P+P+ PS G P++ SAA Sbjct: 210 PEPQSG---RVQGMQPLLLMQA-----PHPVPFHMPSPMGLPYSTPLPPPVVMESAAAIA 261 Query: 65 PPAPPA 70 P PPA Sbjct: 262 PQMPPA 267 >gi|239746092 PREDICTED: hypothetical protein XP_002343656 [Homo sapiens] Length = 195 Score = 31.2 bits (69), Expect = 0.95 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%) Query: 23 QVQGLHG-LVLPPAKD-LPHPQPIPWSCPSSPGTPWACSAAGQRPPAPPAHTLVLSFKSR 80 ++ G+ G L LP +D PQP+PW PG P C A+G R AP A + K+R Sbjct: 133 RLSGVAGCLPLPRPRDGARSPQPLPWK----PGLPSLCVASGLR-TAPDASAPGRAAKTR 187 Query: 81 DS 82 S Sbjct: 188 SS 189 >gi|7662302 TBK1 binding protein 1 [Homo sapiens] Length = 615 Score = 31.2 bits (69), Expect = 0.95 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 9/60 (15%) Query: 32 LPPAKDLPHPQ---PIPWSCPSSPGTPWACSAAGQRPPA------PPAHTLVLSFKSRDS 82 +PP+ P PQ P+P SCP+ P G+R A PP+H + F+ R S Sbjct: 402 VPPSCQSPSPQRRSPVPPSCPAPQPRPPPPPPPGERTLAERAYAKPPSHHVKAGFQGRRS 461 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.133 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,843,712 Number of Sequences: 37866 Number of extensions: 637959 Number of successful extensions: 3900 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 133 Number of HSP's that attempted gapping in prelim test: 3627 Number of HSP's gapped (non-prelim): 378 length of query: 260 length of database: 18,247,518 effective HSP length: 100 effective length of query: 160 effective length of database: 14,460,918 effective search space: 2313746880 effective search space used: 2313746880 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.