Guide to the Human Genome
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Name: PRAMEL Sequence: fasta or formatted (520aa) NCBI GI: 239746677
Description:

PREDICTED: preferentially expressed antigen in melanoma-like

Not currently referenced in the text

Other entries for this name:
alt prot {520aa} PREDICTED: preferentially expressed antigen in melanoma-like
alt prot {520aa} PREDICTED: preferentially expressed antigen in melanoma-like
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         45           2
 C cysteine            3.7         19           2
 D aspartate           4.4         23           1
 E glutamate           4.6         24           2
 F phenylalanine       4.2         22           2
 G glycine             3.5         18           1
 H histidine           4.0         21           2
 I isoleucine          3.1         16           1
 K lysine              4.8         25           2
 L leucine            17.1         89           2
 M methionine          1.9         10           1
 N asparagine          2.1         11           1
 P proline             5.6         29           2
 Q glutamine           4.4         23           2
 R arginine            4.2         22           2
 S serine              9.0         47           2
 T threonine           4.2         22           2
 V valine              6.2         32           2
 W tryptophan          1.9         10           1
 Y tyrosine            2.3         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: preferentially expressed antigen in mela... 
PRAMEL                0.996   PREDICTED: preferentially expressed antigen in mela...
PRAMEL                0.996   PREDICTED: preferentially expressed antigen in mela...
PRAMEF20              0.197   PRAME family member 20 
PRAMEF21              0.197   PRAME family member 21 
PRAMEF12              0.193   PRAME family member 12 
LOC729516             0.189   PREDICTED: similar to Putative PRAME family member ...
PRAMEF8               0.189   PRAME family member 8 
PRAME                 0.187   preferentially expressed antigen in melanoma 
PRAME                 0.187   preferentially expressed antigen in melanoma 
PRAME                 0.187   preferentially expressed antigen in melanoma 
PRAME                 0.187   preferentially expressed antigen in melanoma 
PRAME                 0.187   preferentially expressed antigen in melanoma 
PRAMEF7               0.187   PRAME family member 7 
PRAMEF11              0.181   PREDICTED: PRAME family member 11 
PRAMEF6               0.181   PRAME family member 6 
PRAMEF5               0.180   PRAME family member 5 
PRAMEF25              0.179   PREDICTED: PRAME family member 25-like 
PRAMEF15              0.179   PRAME family member 15 
PRAMEF9               0.179   PRAME family member 9 
PRAMEF23              0.176   PREDICTED: PRAME family member 23 
PRAMEF4               0.174   PRAME family member 4 
PRAMEF11              0.153   PRAME family member 11 
PRAMEF17              0.151   PRAME family member 17 
PRAMEF16              0.151   PRAME family member 16 
PRAMEF22              0.145   PRAME family member 22 
PRAMEF3               0.145   PRAME family member 3 
PRAMEF10              0.140   PRAME family member 10 
LRRC14                0.140   leucine rich repeat containing 14 
PRAMEF1               0.138   PRAME family member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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