Guide to the Human Genome
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Search of human proteins with 239745977

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo
sapiens]
         (177 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo ...   356   7e-99
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        55   4e-08
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             49   2e-06
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             49   2e-06
gi|11641239 hypothetical protein LOC53838 [Homo sapiens]               48   5e-06
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]         45   4e-05
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]          43   1e-04
gi|41281612 zinc finger protein 828 [Homo sapiens]                     42   2e-04
gi|112421108 capicua homolog [Homo sapiens]                            42   2e-04
gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo ...    41   5e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    41   6e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    41   6e-04
gi|38683860 insulin receptor substrate 2 [Homo sapiens]                41   6e-04
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]      40   8e-04
gi|46852392 chromobox homolog 6 [Homo sapiens]                         40   8e-04
gi|85815829 SH3-domain binding protein 1 [Homo sapiens]                40   8e-04
gi|242247193 SH2B adaptor protein 2 [Homo sapiens]                     40   0.001
gi|154146199 sal-like 3 [Homo sapiens]                                 40   0.001
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]    40   0.001
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]    40   0.001
gi|91199550 CD68 antigen isoform B [Homo sapiens]                      40   0.001
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ...    40   0.001
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ...    40   0.001
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]             40   0.001
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         40   0.001
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    39   0.002
gi|163965366 nascent polypeptide-associated complex alpha subuni...    39   0.002
gi|7662162 ALEX2 protein [Homo sapiens]                                39   0.002
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]              39   0.002
gi|29540562 ALEX2 protein [Homo sapiens]                               39   0.002

>gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo
           sapiens]
          Length = 177

 Score =  356 bits (913), Expect = 7e-99
 Identities = 177/177 (100%), Positives = 177/177 (100%)

Query: 1   MASEAAVLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTT 60
           MASEAAVLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTT
Sbjct: 1   MASEAAVLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTT 60

Query: 61  PGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSP 120
           PGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSP
Sbjct: 61  PGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSP 120

Query: 121 ANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQRRSNSSSASVAPLAHR 177
           ANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQRRSNSSSASVAPLAHR
Sbjct: 121 ANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQRRSNSSSASVAPLAHR 177


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 54.7 bits (130), Expect = 4e-08
 Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 31/191 (16%)

Query: 5    AAVLPSE----SSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTT 60
            AA+ P++    SSS S+ +    +  + S S  ++G++SS     SLP     AL    +
Sbjct: 2522 AALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPS 2581

Query: 61   PGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSP 120
            P  AP       + AVR G     +   P PA     +      S + S+SS S+   S 
Sbjct: 2582 PTPAP-------KEAVREG-----RPPEPTPAKRK-RRSSSSSSSSSSSSSSSSSSSSSS 2628

Query: 121  ANCSSSGKDEAAASSTTPPSMGPAAPGP-------GPTPPPPG-RRERQRRS------NS 166
            ++ SSS    +++SS++  S  PA PGP        P  PPPG RR R  R       +S
Sbjct: 2629 SSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDS 2688

Query: 167  SSASVAPLAHR 177
             S S +P+  R
Sbjct: 2689 RSLSYSPVERR 2699



 Score = 35.8 bits (81), Expect = 0.020
 Identities = 55/199 (27%), Positives = 80/199 (40%), Gaps = 32/199 (16%)

Query: 1    MASEAAVLPSESSSWSAVAGGLGAQPAQS---GSWPAAGAASSRRM-KYSLPSDGLCALS 56
            M SE A  PS SS            PAQ       P+A +  SR +   + P  G  +LS
Sbjct: 2419 MTSERA--PSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLS 2476

Query: 57   TGTTPGGAPS-GAHSSCRRAVRPGL--SVAGKASAPRPASHLYSKLRPRLVSVTVSTSSP 113
            +G       S G H+       PG+  S  G+  A   A    +    +      S+SS 
Sbjct: 2477 SGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSS 2536

Query: 114  SAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPG---------PGPTPPP---------- 154
            S+   S ++ SSS    +++ S++  S G + P          P PTP P          
Sbjct: 2537 SSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPP 2596

Query: 155  ---PGRRERQRRSNSSSAS 170
               P +R+R R S+SSS+S
Sbjct: 2597 EPTPAKRKR-RSSSSSSSS 2614



 Score = 35.0 bits (79), Expect = 0.034
 Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 4/153 (2%)

Query: 2    ASEAAVLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTP 61
            A+ AA +   S+   A+   +    +++ +  AA   +S R   +  +  L    T T P
Sbjct: 2234 AASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAP 2293

Query: 62   GGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPA 121
                +GA +    A    LS+ G  + P  A++  S   P+  +        SA   +P 
Sbjct: 2294 AVNLAGARTPAALAA---LSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPV 2350

Query: 122  NCSSSGKDEA-AASSTTPPSMGPAAPGPGPTPP 153
            N + S    A A +S T   M PA  G   T P
Sbjct: 2351 NIAGSRTAAALAPASLTSARMAPALSGANLTSP 2383



 Score = 34.3 bits (77), Expect = 0.058
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 4/83 (4%)

Query: 87  SAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAAP 146
           S   P S   S+L  R  S++ S+  P     +P   S SG  +  A S TPP    ++ 
Sbjct: 761 SLSSPRSKAKSRLSLRR-SLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSS 819

Query: 147 GPGPTPPPPGRRERQRRSNSSSA 169
            P   PP    +   R+S+SSS+
Sbjct: 820 SP---PPKQKSKTPSRQSHSSSS 839



 Score = 34.3 bits (77), Expect = 0.058
 Identities = 44/147 (29%), Positives = 59/147 (40%), Gaps = 10/147 (6%)

Query: 24   AQPAQSGS--WPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLS 81
            A  AQSGS   P   A + R +     S G  +   G +P G+ S   SS     +   +
Sbjct: 1611 APRAQSGSDSSPEPKAPAPRALPRRSRS-GSSSKGRGPSPEGS-SSTESSPEHPPKSRTA 1668

Query: 82   VAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSP-ANCSSSGKDEAAASSTTPPS 140
              G  S+P P +   S+  PR  S   S SSP   + +  +  S S        S TPP 
Sbjct: 1669 RRGSRSSPEPKTK--SRTPPRRRS---SRSSPELTRKARLSRRSRSASSSPETRSRTPPR 1723

Query: 141  MGPAAPGPGPTPPPPGRRERQRRSNSS 167
               +     P P    R  R+RRS SS
Sbjct: 1724 HRRSPSVSSPEPAEKSRSSRRRRSASS 1750



 Score = 34.3 bits (77), Expect = 0.058
 Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 11/157 (7%)

Query: 8    LPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSG 67
            LP  S S S+ + G G  P         G++S+       P        + ++P      
Sbjct: 1632 LPRRSRSGSS-SKGRGPSPE--------GSSSTESSPEHPPKSRTARRGSRSSPEPKTKS 1682

Query: 68   AHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSG 127
                 RR+ R    +  KA   R +    S    R  +      SPS   P PA  S S 
Sbjct: 1683 RTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSS 1742

Query: 128  KDEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQRRS 164
            +   +ASS  P +   +  G  P+P P G +  + RS
Sbjct: 1743 RRRRSASS--PRTKTTSRRGRSPSPKPRGLQRSRSRS 1777



 Score = 32.3 bits (72), Expect = 0.22
 Identities = 37/133 (27%), Positives = 48/133 (36%), Gaps = 12/133 (9%)

Query: 37  AASSRRMKYSLPSDGLCALSTGTTPG-GAPSGAHSSCR--RAVRPGLSVAGKASAPRPAS 93
           A  SRR   S  +D   +  T  +    A +  H++    R+  P     G+  AP    
Sbjct: 254 APKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEP 313

Query: 94  HLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPP 153
              S  RP   S   +T  PS    SP       K E +A   T PS  P     GP PP
Sbjct: 314 GTTSTQRPS--SPETATKQPS----SPYEDKDKDKKEKSA---TRPSPSPERSSTGPEPP 364

Query: 154 PPGRRERQRRSNS 166
            P     +R   S
Sbjct: 365 APTPLLAERHGGS 377



 Score = 32.0 bits (71), Expect = 0.29
 Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 73   RRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVT---VSTSSPSAWKPSPAN-CSSSGK 128
            RR    G S     SA  PA+  +S  R   V++    +S  S  +  P+P + C S G 
Sbjct: 2076 RRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGM 2135

Query: 129  DEAAASSTTPPSM-----GPAAPGPGPTPP 153
             E   SS TP S+     G    GPGP  P
Sbjct: 2136 LEPLGSSRTPMSVLQQAGGSMMDGPGPRIP 2165



 Score = 31.6 bits (70), Expect = 0.38
 Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 11/142 (7%)

Query: 34   AAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPR--- 90
            ++ ++SS     S  S    + S+ ++   + S + SS     +PG     K ++P+   
Sbjct: 2610 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPP 2669

Query: 91   --------PASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMG 142
                    P   + S    R +S +       + +PSP +  SS  +  +       S  
Sbjct: 2670 PGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRS 2729

Query: 143  PAAPGPGPTPPPPGRRERQRRS 164
            P+      TP P   R R  RS
Sbjct: 2730 PSHKRRRETPSPRPMRHRSSRS 2751



 Score = 30.4 bits (67), Expect = 0.84
 Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 9/120 (7%)

Query: 60   TPGGAPSGAHSSCRRAVRPGLSVAGKA---SAPRPASHLYSKLRPRLVSVT---VSTSSP 113
            TP G  S + SS    V+P  S   ++   S+P   +   + LR R  S +   V + S 
Sbjct: 1531 TPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSR 1590

Query: 114  SAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQRRSNSSSASVAP 173
             + + S +  S   KD+  A+   P +   +   P P  P P    R+ RS SSS    P
Sbjct: 1591 LSPRRSRSGSSPEVKDKPRAA---PRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGP 1647



 Score = 26.9 bits (58), Expect = 9.3
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 14/115 (12%)

Query: 56  STGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSA 115
           S  TTP      AH S               SA   +S   S+ R R  +    T++ + 
Sbjct: 248 SRSTTPAPKSRRAHRS--------------TSADSASSSDTSRSRSRSAAAKTHTTALAG 293

Query: 116 WKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQRRSNSSSAS 170
             PSPA+      D   +   T  +  P++P      P     ++ +     SA+
Sbjct: 294 RSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSAT 348


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 48/178 (26%), Positives = 69/178 (38%), Gaps = 12/178 (6%)

Query: 9   PSESSSWSAVA--GGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPS 66
           PS  S W +    GG G +    G  P  G+A S   K S PS  +   +    P     
Sbjct: 302 PSGGSGWGSPQRNGGSGQRSGAHGGRP--GSAHSPPDKPSSPSPRVRDKAAAAAPTPPAR 359

Query: 67  GAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSS 126
           G  S   R+        G+A+          + R R  S   +       +P PA    S
Sbjct: 360 GKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGS 419

Query: 127 GKDEAAASSTTPPSMGPAAPGPGPTPPPP------GRRERQR--RSNSSSASVAPLAH 176
            +  + A S++    G  APGPGP P         G+R ++R  R+  +S S +P AH
Sbjct: 420 SRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAH 477



 Score = 26.9 bits (58), Expect = 9.3
 Identities = 44/204 (21%), Positives = 65/204 (31%), Gaps = 31/204 (15%)

Query: 5   AAVLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPG-- 62
           AA  P+  +          A  +Q     AAG A  RR +         + S     G  
Sbjct: 350 AAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRR 409

Query: 63  ----GAPSGAHSSCRRAVRPGLSVAGKAS---APRPASHLYSKLRPRLVSVTVSTSSPSA 115
                 P G+  S  RA     S +G+ +    P P S        +        + P++
Sbjct: 410 RPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPAS 469

Query: 116 WKPSPANCSSSGKDEAAASSTTP------------PSMG--------PAAPGPGPTPPPP 155
             PSP      G  E  +SS +P            PS          P +P   P+P  P
Sbjct: 470 TSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKP 529

Query: 156 GRRER--QRRSNSSSASVAPLAHR 177
             R++  + R+  S A       R
Sbjct: 530 LSRDKDGEGRARHSEAEATRARRR 553


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 48.9 bits (115), Expect = 2e-06
 Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 7/162 (4%)

Query: 2    ASEAAVLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLP-SDGLCALSTGTT 60
            AS +A +P+     S +A  L +  A   + P A  ++S  +  S+P S    A+++ + 
Sbjct: 1779 ASTSAPVPA-----STLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSSA 1833

Query: 61   PGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPS- 119
            P  AP+        +    +++   AS P  AS L S   P       S ++P    P+ 
Sbjct: 1834 PASAPAPTPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAPTI 1893

Query: 120  PANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQ 161
            PA+  ++    A AS++ P         P P PP P + + Q
Sbjct: 1894 PASAPTASVPLAPASASAPAPAPTPVSAPNPAPPAPAQTQAQ 1935



 Score = 33.1 bits (74), Expect = 0.13
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 12/97 (12%)

Query: 59   TTPGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKP 118
            +T    P+   +     + P   V    SAP PAS         L  V  STS+P    P
Sbjct: 1757 STSASVPASTSAPLPATLTP---VPASTSAPVPAS--------TLAPVLASTSAPVPASP 1805

Query: 119  -SPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPP 154
             +P + S+S      AS++       +AP   P P P
Sbjct: 1806 LAPVSASASVSASVPASTSAAAITSSSAPASAPAPTP 1842


>gi|11641239 hypothetical protein LOC53838 [Homo sapiens]
          Length = 449

 Score = 47.8 bits (112), Expect = 5e-06
 Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 16/144 (11%)

Query: 5   AAVLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGA 64
           A+  P+ ++S + VA       A S +     AASS  M  +LP+    + STG TP   
Sbjct: 129 ASSAPTTAASSTTVASIAPTTAASSMT-----AASSTPMTLALPAP--TSTSTGRTPSTT 181

Query: 65  PSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCS 124
            +G H S   A+     V   ++ PR A+      R + V+ T +TSSP + +PSP+   
Sbjct: 182 ATG-HPSLSTALA---QVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHM 237

Query: 125 SSGKDEAAASSTTPPSMGPAAPGP 148
            S      A+S  PP M P A GP
Sbjct: 238 PSD----TAASPVPP-MRPQAQGP 256


>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
          Length = 365

 Score = 44.7 bits (104), Expect = 4e-05
 Identities = 38/119 (31%), Positives = 50/119 (42%), Gaps = 20/119 (16%)

Query: 61  PGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAW-KPS 119
           PGG P GA +  RR  +P    A     P+ AS L + LRP          +P+ + +PS
Sbjct: 252 PGGPPVGAEAWARRVPQP---AAPPRRPPQSASSLSASLRP--------PGAPATFLRPS 300

Query: 120 PANCSSSGKDEAAASSTTP------PSMGPAAPGPGPTPP--PPGRRERQRRSNSSSAS 170
           P  CSS G  ++      P      P+ GP    PG T P   PG    +    S  AS
Sbjct: 301 PIPCSSPGPWQSLCGLGPPCAGCPWPTAGPGRRSPGGTSPERSPGTARARGDPTSLQAS 359



 Score = 33.5 bits (75), Expect = 0.099
 Identities = 27/92 (29%), Positives = 32/92 (34%), Gaps = 18/92 (19%)

Query: 100 RPRLVSVTVSTSSPSAWKPS--PANCSSSGKDEAAASSTTPPSMGPAAPGPGP------- 150
           RPRL     +  SP     +  P  C  SG  EA  + + P    PAAP  GP       
Sbjct: 127 RPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPKAGPPGLVHPL 186

Query: 151 ---------TPPPPGRRERQRRSNSSSASVAP 173
                    TPPP       RRS+       P
Sbjct: 187 FSPSHLTSKTPPPLYLPTEGRRSDLPGGLAGP 218


>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
          Length = 845

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 40/152 (26%), Positives = 55/152 (36%), Gaps = 39/152 (25%)

Query: 9   PSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGA 68
           PS+  S ++  GG G  P                     PS       T +TPGG P   
Sbjct: 487 PSQGPSTTSSGGGTGPHP---------------------PSGTTLRPPTSSTPGGPPGAE 525

Query: 69  HSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGK 128
           +S+  +   PG      A  P+P +      +P    V  STS     +P+  +  ++  
Sbjct: 526 NSTSHQPATPG---GDTAQTPKPGTS-----QPMPPGVGTSTSH----QPATPSGGTAQT 573

Query: 129 DEAAASSTTPPSMG------PAAPGPGPTPPP 154
            E   S   PPSMG      PA PG G    P
Sbjct: 574 PEPGTSQPMPPSMGTSTSHQPATPGGGTAQTP 605



 Score = 30.0 bits (66), Expect = 1.1
 Identities = 21/75 (28%), Positives = 27/75 (36%), Gaps = 10/75 (13%)

Query: 83  AGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMG 142
           +GKA  P+P         P            + W P P+  +   K   A     P   G
Sbjct: 702 SGKAPEPQPQGFDNQAFLP---------DHKANWAPVPSP-THDPKPAEAPMPAEPAPPG 751

Query: 143 PAAPGPGPTPPPPGR 157
           PA+PG  P PP   R
Sbjct: 752 PASPGGAPEPPAAAR 766


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 53/184 (28%), Positives = 72/184 (39%), Gaps = 24/184 (13%)

Query: 9   PSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGA 68
           PS SS  S V   L A P   G  PAA   S +  + + P     + S    P       
Sbjct: 240 PSASSPESPV---LAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAV 296

Query: 69  HSSCRR---AVRPGLSVAGKASAPRP----ASHLYSKLRPRLVSVTVSTS--------SP 113
               RR   AV PG    G   +PRP     S      +P   + +VS          SP
Sbjct: 297 SPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSP 356

Query: 114 SAWKPSPANCSSSGKDEAAASSTTPPS--MGPAAPGPGPTPPPPGRRERQRRSNSSSASV 171
             WKP+P+  S+S K    +SS +P S    PA+P    + PP  R+     S     +V
Sbjct: 357 GPWKPTPSVSSASWK----SSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHWKAV 412

Query: 172 APLA 175
            P++
Sbjct: 413 PPVS 416


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 41/142 (28%), Positives = 53/142 (37%), Gaps = 38/142 (26%)

Query: 30   GSWPAAGAASSRRMKYS--LPSDGLCALST---------GTTPGGAPSGAHSSCRRAVRP 78
            G +P+A A ++ + +Y+   PS     L             TP   P GA      A  P
Sbjct: 1482 GFFPSAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAE-----APLP 1536

Query: 79   GLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTP 138
                 G A+AP P                  T SP+      +  S SG  +AA     P
Sbjct: 1537 VPPPTGTAAAPAP------------------TPSPAGGPDPTSPSSDSGTAQAAPPLPPP 1578

Query: 139  PSMGPAAPG----PGPTPPPPG 156
            P  GP  PG    P P+PPPPG
Sbjct: 1579 PESGPGQPGWEGAPQPSPPPPG 1600



 Score = 32.0 bits (71), Expect = 0.29
 Identities = 44/179 (24%), Positives = 61/179 (34%), Gaps = 44/179 (24%)

Query: 24   AQPAQSGSWPAAGAASSRRMKYSL-------PSD--------GLCALSTGTTPGGAPSGA 68
            A PA +  +P+A A S   M YSL       PS          + ++  G+   GA    
Sbjct: 1144 ATPAPTSPFPSATAGS---MTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRP 1200

Query: 69   HSSCRRAVRPG---------LSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPS 119
              + R+ + PG           + G+ + P P         P L      T+  S   P 
Sbjct: 1201 GPAPRQPLEPGPVREPTAPESELEGQPTPPAP---------PPLPETWTPTARSSPPLPP 1251

Query: 120  PANCSSSGKDEAAASSTTP--------PSMGPAAPGPGPTPPPPGRRERQRRSNSSSAS 170
            PA   +S K     +S  P        P  G    G  PTPP P          SS +S
Sbjct: 1252 PAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRGEPPTPPSPAPAPAVAPGGSSESS 1310



 Score = 29.6 bits (65), Expect = 1.4
 Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 7/106 (6%)

Query: 48  PSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVA-GKASAP--RPASHLYSKLRPRLV 104
           PS G   L T   P           R    P  S+A G  +AP  RPA+ + + +    V
Sbjct: 621 PSGGGNILQTLVLPPNKEEQEGGGARVPSAPAPSLAYGAPAAPLSRPAATMVTNV----V 676

Query: 105 SVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGP 150
               ST  P A KP P +  +       A + T    G   PG  P
Sbjct: 677 RPVSSTPVPIASKPFPTSGRAEASPNDTAGARTEMGTGSRVPGGSP 722



 Score = 29.6 bits (65), Expect = 1.4
 Identities = 54/191 (28%), Positives = 76/191 (39%), Gaps = 30/191 (15%)

Query: 4    EAAVLPSESS-SWSAVAGG----LGAQPA--QSGSWPAAGAASSRRMKY-SLPSDGLCAL 55
            +  +LPS +  ++   AGG    LG  PA  Q+G+  + G  SS  + + SL   G   +
Sbjct: 994  QKVLLPSSTRITYVQSAGGHALPLGTSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFV 1053

Query: 56   STGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPR-PASHLYSKLRPRLVSVTVSTSSPS 114
                + G AP  A      +  P   +    +AP  P    +    P        TSS  
Sbjct: 1054 QPLLSAGQAPLLAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSP------APTSSAP 1107

Query: 115  AWKPSPANCSSSGKDEAAASSTTPPSM-----GPAAPG---PGPTPPPPGRRERQRRSNS 166
              +PS A  S        A+STTPP+      GP AP    P PT P P         + 
Sbjct: 1108 LAQPSQAPPSLV---YTVATSTTPPAATILPKGPPAPATATPAPTSPFPS----ATAGSM 1160

Query: 167  SSASVAPLAHR 177
            + + VAP A R
Sbjct: 1161 TYSLVAPKAQR 1171



 Score = 27.7 bits (60), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 131  AAASSTTPPSMGPAAPGPGPTPPPPGRRE-RQRRSNSSSASVAP 173
            A A    PP  G AA  P PTP P G  +     S+S +A  AP
Sbjct: 1531 AEAPLPVPPPTGTAA-APAPTPSPAGGPDPTSPSSDSGTAQAAP 1573


>gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo
           sapiens]
          Length = 963

 Score = 41.2 bits (95), Expect = 5e-04
 Identities = 32/97 (32%), Positives = 41/97 (42%), Gaps = 10/97 (10%)

Query: 62  GGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLR----PRLVSVTVSTSSPSAWK 117
           GG P GA     +    G  VA     P P        +    P+L   T S+SS SA  
Sbjct: 8   GGGPGGAGGGSGQR---GSGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAA 64

Query: 118 PSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPP 154
            S ++ S+S     A +S + P   P  PGPG TP P
Sbjct: 65  ASSSSSSTSTSMAVAVASGSAP---PGGPGPGRTPAP 98


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 40.8 bits (94), Expect = 6e-04
 Identities = 52/172 (30%), Positives = 63/172 (36%), Gaps = 32/172 (18%)

Query: 9   PSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGA 68
           P   +  +A+ GG   Q   S S P +        +  LP     AL     P   P G 
Sbjct: 221 PFPGNRGTALGGGSIRQSPLSSSSPFSN-------RPPLPPTPSRALDDKPPPPPPPVGN 273

Query: 69  HSSCRR-AVRPGLSVAGKA---SAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCS 124
             S  R AV P      K    S PRP++   +   P           PS   P P   S
Sbjct: 274 RPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP---------PPPSRPGPPPLPPS 324

Query: 125 SSGKDEA--------AASSTTPPSMGPAAPGPGPTP----PPPGRRERQRRS 164
           SSG DE         + SS+TPP   P   GP P P    PPP  R+   RS
Sbjct: 325 SSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRS 376



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 32/104 (30%), Positives = 38/104 (36%), Gaps = 13/104 (12%)

Query: 56  STGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSA 115
           ST   P   PSG          P  S   ++  P P  +     RP + S   S   P  
Sbjct: 135 STSAKPFSPPSGPGRF------PVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVP 188

Query: 116 WKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPP-PGRR 158
             P P   S   +       + P   GP  P PGPTPPP PG R
Sbjct: 189 STPRPIQSSPHNR------GSPPVPGGPRQPSPGPTPPPFPGNR 226



 Score = 32.3 bits (72), Expect = 0.22
 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 89  PRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMG--PAAP 146
           P P S   +   PRL    +S SS +   PSP     SG      S   PP +   P   
Sbjct: 320 PLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGR---SGPLPPPPSERPPPPVRDPPGRS 376

Query: 147 GPGPTPPPPGRRERQRRS 164
           GP P PPP  R     R+
Sbjct: 377 GPLPPPPPVSRNGSTSRA 394



 Score = 32.0 bits (71), Expect = 0.29
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 131 AAASSTTPPSMGPAAPGPGPTPP-PPGRRERQR---RSNSSSASVAPL 174
           +A+S   PP   P+ PGP P PP   G  E  R   R+ S S+S  PL
Sbjct: 301 SASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPL 348


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 40.8 bits (94), Expect = 6e-04
 Identities = 52/172 (30%), Positives = 63/172 (36%), Gaps = 32/172 (18%)

Query: 9   PSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGA 68
           P   +  +A+ GG   Q   S S P +        +  LP     AL     P   P G 
Sbjct: 221 PFPGNRGTALGGGSIRQSPLSSSSPFSN-------RPPLPPTPSRALDDKPPPPPPPVGN 273

Query: 69  HSSCRR-AVRPGLSVAGKA---SAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCS 124
             S  R AV P      K    S PRP++   +   P           PS   P P   S
Sbjct: 274 RPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP---------PPPSRPGPPPLPPS 324

Query: 125 SSGKDEA--------AASSTTPPSMGPAAPGPGPTP----PPPGRRERQRRS 164
           SSG DE         + SS+TPP   P   GP P P    PPP  R+   RS
Sbjct: 325 SSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRS 376



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 32/104 (30%), Positives = 38/104 (36%), Gaps = 13/104 (12%)

Query: 56  STGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSA 115
           ST   P   PSG          P  S   ++  P P  +     RP + S   S   P  
Sbjct: 135 STSAKPFSPPSGPGRF------PVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVP 188

Query: 116 WKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPP-PGRR 158
             P P   S   +       + P   GP  P PGPTPPP PG R
Sbjct: 189 STPRPIQSSPHNR------GSPPVPGGPRQPSPGPTPPPFPGNR 226



 Score = 32.3 bits (72), Expect = 0.22
 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 89  PRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMG--PAAP 146
           P P S   +   PRL    +S SS +   PSP     SG      S   PP +   P   
Sbjct: 320 PLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGR---SGPLPPPPSERPPPPVRDPPGRS 376

Query: 147 GPGPTPPPPGRRERQRRS 164
           GP P PPP  R     R+
Sbjct: 377 GPLPPPPPVSRNGSTSRA 394



 Score = 32.0 bits (71), Expect = 0.29
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 131 AAASSTTPPSMGPAAPGPGPTPP-PPGRRERQR---RSNSSSASVAPL 174
           +A+S   PP   P+ PGP P PP   G  E  R   R+ S S+S  PL
Sbjct: 301 SASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPL 348


>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
          Length = 1338

 Score = 40.8 bits (94), Expect = 6e-04
 Identities = 53/165 (32%), Positives = 68/165 (41%), Gaps = 47/165 (28%)

Query: 33  PAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPRPA 92
           P A   SS R++ +   DG      G   G A +GA        RP +SVAG   +P P 
Sbjct: 351 PPAAKCSSCRVRTASEGDG------GAAAGAAAAGA--------RP-VSVAGSPLSPGPV 395

Query: 93  ------SHLYS----------KLRP--------RLVSVTVSTSSPSAWKPSPANCSSSGK 128
                 SH  S           L P        R +S+ V+ S P+A  P   + SSSG 
Sbjct: 396 RAPLSRSHTLSGGCGGRGSKVALLPAGGALQHSRSMSMPVAHSPPAATSPGSLS-SSSGH 454

Query: 129 DEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQRRSNSSSASVAP 173
                S + PP  GP  P P P    PG+R     S S+SAS +P
Sbjct: 455 ----GSGSYPPPPGPHPPLPHPLHHGPGQRP---SSGSASASGSP 492



 Score = 30.4 bits (67), Expect = 0.84
 Identities = 42/157 (26%), Positives = 58/157 (36%), Gaps = 11/157 (7%)

Query: 7    VLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPG-GAP 65
            +L S +SS S ++    A    SG+    G +S  R +  L        S+  +P  GAP
Sbjct: 938  LLASAASSSSLLSASSPASSLGSGT---PGTSSDSRQRSPLSDYMNLDFSSPKSPKPGAP 994

Query: 66   SGAH-SSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVT------VSTSSPSAWKP 118
            SG    S    + P  S       PRP++   S L+P            +  +S  A   
Sbjct: 995  SGHPVGSLDGLLSPEASSPYPPLPPRPSASPSSSLQPPPPPPAPGELYRLPPASAVATAQ 1054

Query: 119  SPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPP 155
             P   SS   D       T  + G AA  P P   PP
Sbjct: 1055 GPGAASSLSSDTGDNGDYTEMAFGVAATPPQPIAAPP 1091



 Score = 28.1 bits (61), Expect = 4.2
 Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 9/122 (7%)

Query: 60   TPGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVS-VTVSTSSPSAWKP 118
            +P   P  A ++   ++    S A    +  P +   S+ R  L   + +  SSP + KP
Sbjct: 932  SPPAPPLLASAASSSSLLSASSPASSLGSGTPGTSSDSRQRSPLSDYMNLDFSSPKSPKP 991

Query: 119  SPANCSSSGKDEAAASSTTPPSMGPAAPGPG--------PTPPPPGRRERQRRSNSSSAS 170
               +    G  +   S        P  P P         P PPPP   E  R   +S+ +
Sbjct: 992  GAPSGHPVGSLDGLLSPEASSPYPPLPPRPSASPSSSLQPPPPPPAPGELYRLPPASAVA 1051

Query: 171  VA 172
             A
Sbjct: 1052 TA 1053



 Score = 27.7 bits (60), Expect = 5.4
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 20/83 (24%)

Query: 78  PGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTT 137
           PG ++AG  S    +   Y  + P  VS       P A               AAA++  
Sbjct: 658 PGAALAGSGSGSCRSDD-YMPMSPASVSAPKQILQPRA---------------AAAAAAA 701

Query: 138 PPSMGPAAPGP----GPTPPPPG 156
            PS GPA P P    G T P  G
Sbjct: 702 VPSAGPAGPAPTSAAGRTFPASG 724


>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
          Length = 1178

 Score = 40.4 bits (93), Expect = 8e-04
 Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 9/77 (11%)

Query: 79  GLSVAGK-ASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTT 137
           GLS A   AS P P S L + + P   S  +ST++ S   P PA+   S      A +T 
Sbjct: 906 GLSAAQPPASYPLPGSPLAAGVLPSQNSSVLSTAATS---PQPASAGIS-----QAQATV 957

Query: 138 PPSMGPAAPGPGPTPPP 154
           PP++    PGP P+P P
Sbjct: 958 PPAVPTHTPGPAPSPSP 974



 Score = 30.0 bits (66), Expect = 1.1
 Identities = 12/21 (57%), Positives = 12/21 (57%)

Query: 138 PPSMGPAAPGPGPTPPPPGRR 158
           PP   PA P  GP PPPP  R
Sbjct: 45  PPPPPPAGPSRGPLPPPPPPR 65



 Score = 28.9 bits (63), Expect = 2.4
 Identities = 34/129 (26%), Positives = 42/129 (32%), Gaps = 20/129 (15%)

Query: 19   AGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRP 78
            AG   AQP  S   P +  A+       LPS     LST  T     S   S  +  V P
Sbjct: 905  AGLSAAQPPASYPLPGSPLAAG-----VLPSQNSSVLSTAATSPQPASAGISQAQATVPP 959

Query: 79   GLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTP 138
             +       AP P+        P L   T  + S S         S+ G   A  +   P
Sbjct: 960  AVPTHTPGPAPSPS--------PALTHSTAQSDSTS-------YISAVGNTNANGTVVPP 1004

Query: 139  PSMGPAAPG 147
              MG    G
Sbjct: 1005 QQMGSGPCG 1013


>gi|46852392 chromobox homolog 6 [Homo sapiens]
          Length = 412

 Score = 40.4 bits (93), Expect = 8e-04
 Identities = 37/140 (26%), Positives = 53/140 (37%), Gaps = 16/140 (11%)

Query: 37  AASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLY 96
           A S  + + S P  GL  L+    P  A S   S C               +P P S   
Sbjct: 244 APSPGKAEASAPGPGLL-LAAPAAPYDARSSGSSGC--------------PSPTPQSSDP 288

Query: 97  SKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPG 156
               P+L+  TVS S+PS W+       S   + AA S   PP +  AA    PT P P 
Sbjct: 289 DDTPPKLLPETVSPSAPS-WREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPA 347

Query: 157 RRERQRRSNSSSASVAPLAH 176
               +  +      ++P ++
Sbjct: 348 GASSEPEAGDWRPEMSPCSN 367



 Score = 27.3 bits (59), Expect = 7.1
 Identities = 31/111 (27%), Positives = 40/111 (36%), Gaps = 15/111 (13%)

Query: 52  LCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTS 111
           L  +  G   GGA  GA +  R  V     V GK+          S LR ++  +     
Sbjct: 178 LKVIDKGAGGGGAGQGAGALARPKVPSRNRVIGKSK-----KFSESVLRTQIRHMKFGAF 232

Query: 112 SPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAAP----------GPGPTP 152
           +     P+P    S GK EA+A         PAAP           P PTP
Sbjct: 233 ALYKPPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTP 283


>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
          Length = 701

 Score = 40.4 bits (93), Expect = 8e-04
 Identities = 50/175 (28%), Positives = 68/175 (38%), Gaps = 23/175 (13%)

Query: 1   MASEAAVLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTT 60
           +ASE   LPS +    A        PA + +   A AA+  R +  +P        T + 
Sbjct: 494 LASEE--LPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSP 551

Query: 61  PGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSP 120
           P  A +      RR  RP      + + P P              V+ S SSP A  P P
Sbjct: 552 PETA-APVEDMARRTKRPA---PARPTMPPP-------------QVSGSRSSPPA-PPLP 593

Query: 121 ANCSSSGKDEAAASSTTPPSM-GPAAPGP-GPTPPPPGRRERQRRSNSSSASVAP 173
               S G  +A        S+  P  P P  PTPP P RR+  RRS +S +  +P
Sbjct: 594 PGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQ-SRRSPASPSPASP 647



 Score = 33.5 bits (75), Expect = 0.099
 Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 13/118 (11%)

Query: 39  SSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSK 98
           S R     LPS  +   +T   P  AP+ A         P  ++A  A+  R  S    +
Sbjct: 491 SDRLASEELPSTAVPTPATTPAPAPAPAPA---------PAPALASAATKERTES----E 537

Query: 99  LRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPG 156
           + PR  S  V+ S P    P       + +   A  +  PP +  +   P   P PPG
Sbjct: 538 VPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPG 595



 Score = 30.8 bits (68), Expect = 0.64
 Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 5/110 (4%)

Query: 61  PG-GAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPS 119
           PG G+P    +  RR V   L          P     ++ + R    + S +SP    PS
Sbjct: 594 PGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPS 653

Query: 120 PANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPP--PPGRRERQRRSNSS 167
           P + S+  + +  A+  T     P A    PTPP  PP  R R   S ++
Sbjct: 654 PVSLSNPAQVDLGAA--TAEGGAPEAISGVPTPPAIPPQPRPRSLASETN 701


>gi|242247193 SH2B adaptor protein 2 [Homo sapiens]
          Length = 675

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 10/75 (13%)

Query: 111 SSPSAWKPSP----------ANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPGRRER 160
           +SP+ W  SP          A C  +   +AA +S++  S   AA GP P  P  G+   
Sbjct: 576 ASPACWSDSPGQHYFSSLAAAACPPASPSDAAGASSSSASSSSAASGPAPPRPVEGQLSA 635

Query: 161 QRRSNSSSASVAPLA 175
           + RSNS+   +  +A
Sbjct: 636 RSRSNSAERLLEAVA 650


>gi|154146199 sal-like 3 [Homo sapiens]
          Length = 1300

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 21/114 (18%)

Query: 77  RPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPS----------------- 119
           RP LS A   SAP PA    S+L P L ++ +S  +P+A                     
Sbjct: 239 RPSLSPAAAPSAPGPAP---SQL-PGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSR 294

Query: 120 PANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQRRSNSSSASVAP 173
           P + +S+    A  S+   PS  PA   P P P P      Q +S S+  ++AP
Sbjct: 295 PESGASTPGGPAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQPQSASTPPALAP 348



 Score = 35.0 bits (79), Expect = 0.034
 Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 21/127 (16%)

Query: 48  PSDGLCALSTGTTPGGAPS---GAHSSCRRAVRPGLSVAGKASAP-----------RPAS 93
           P   L   +  + PG APS   G  +    A  P  ++AG   A            RP S
Sbjct: 238 PRPSLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPES 297

Query: 94  HLYSKLRPRLVSVTVSTSS-PSAWKPSPANCSSSGKDEAAASSTTPPSMGP-----AAPG 147
              +   P   S   + S+ P+   P+PA    S       S++TPP++ P     AAPG
Sbjct: 298 GASTPGGPAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQPQSASTPPALAPGSLLGAAPG 357

Query: 148 -PGPTPP 153
            P P  P
Sbjct: 358 LPSPLLP 364


>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
          Length = 1013

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 25/81 (30%), Positives = 38/81 (46%)

Query: 68  AHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSG 127
           AH S   A  P    A   SAP P         P   + T ++SS S+   S ++ SS+ 
Sbjct: 43  AHRSVLAASSPFFREALLTSAPLPLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSAS 102

Query: 128 KDEAAASSTTPPSMGPAAPGP 148
              +++SS+ PP+  PA+  P
Sbjct: 103 SSSSSSSSSPPPASPPASSPP 123



 Score = 31.2 bits (69), Expect = 0.49
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 100 RPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASST--TP-PSMGPAAPGPGPTP-PPP 155
           +P+L ++ +    P      P    S G  EA  S T  TP P   PA+P PGP P P P
Sbjct: 406 KPKLNTLKLYRLLPMRAAKRPYKTYSQGAPEAPLSPTLNTPAPVAMPASPPPGPPPAPEP 465

Query: 156 G 156
           G
Sbjct: 466 G 466



 Score = 28.5 bits (62), Expect = 3.2
 Identities = 43/168 (25%), Positives = 54/168 (32%), Gaps = 30/168 (17%)

Query: 12  SSSWSAVAGGLGAQPAQS-----------GSWPAAGAASSRRMKYSLPSDGLCALSTGTT 60
           SSS  A  G   A+ A             G  P   A+    +   +    L  +  G  
Sbjct: 826 SSSGEAGGGSTAAEEASETASLQDPIISGGEEPPVVASGGSYVYPPVQEFPLALIGGGRE 885

Query: 61  PGGA--------PSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSS 112
           PGG         P GA    R     G+  A     P P   +Y    P+L++      S
Sbjct: 886 PGGGRGKSGSEGPVGAGEGDRME---GIGAAKVTFYPEPYPLVYG---PQLLAAYPYNFS 939

Query: 113 PSAWKPSPANCSSSGKDEAAASSTTPPSMG-----PAAPGPGPTPPPP 155
             A  P   N     +  A A    P   G      AAP   PTPPPP
Sbjct: 940 NLAALPVALNMVLPDEKGAGALPFLPGVFGYAVNPQAAPPAPPTPPPP 987



 Score = 26.9 bits (58), Expect = 9.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 138 PPSMGPAAPGPGPTPPPPGRRERQRRSNSSSASVA 172
           PP+ G AAP P  T            S+SSS+S +
Sbjct: 68  PPATGGAAPNPATTTAASSSSSSSSSSSSSSSSAS 102


>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
          Length = 1013

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 25/81 (30%), Positives = 38/81 (46%)

Query: 68  AHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSG 127
           AH S   A  P    A   SAP P         P   + T ++SS S+   S ++ SS+ 
Sbjct: 43  AHRSVLAASSPFFREALLTSAPLPLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSAS 102

Query: 128 KDEAAASSTTPPSMGPAAPGP 148
              +++SS+ PP+  PA+  P
Sbjct: 103 SSSSSSSSSPPPASPPASSPP 123



 Score = 31.2 bits (69), Expect = 0.49
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 100 RPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASST--TP-PSMGPAAPGPGPTP-PPP 155
           +P+L ++ +    P      P    S G  EA  S T  TP P   PA+P PGP P P P
Sbjct: 406 KPKLNTLKLYRLLPMRAAKRPYKTYSQGAPEAPLSPTLNTPAPVAMPASPPPGPPPAPEP 465

Query: 156 G 156
           G
Sbjct: 466 G 466



 Score = 28.5 bits (62), Expect = 3.2
 Identities = 43/168 (25%), Positives = 54/168 (32%), Gaps = 30/168 (17%)

Query: 12  SSSWSAVAGGLGAQPAQS-----------GSWPAAGAASSRRMKYSLPSDGLCALSTGTT 60
           SSS  A  G   A+ A             G  P   A+    +   +    L  +  G  
Sbjct: 826 SSSGEAGGGSTAAEEASETASLQDPIISGGEEPPVVASGGSYVYPPVQEFPLALIGGGRE 885

Query: 61  PGGA--------PSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSS 112
           PGG         P GA    R     G+  A     P P   +Y    P+L++      S
Sbjct: 886 PGGGRGKSGSEGPVGAGEGDRME---GIGAAKVTFYPEPYPLVYG---PQLLAAYPYNFS 939

Query: 113 PSAWKPSPANCSSSGKDEAAASSTTPPSMG-----PAAPGPGPTPPPP 155
             A  P   N     +  A A    P   G      AAP   PTPPPP
Sbjct: 940 NLAALPVALNMVLPDEKGAGALPFLPGVFGYAVNPQAAPPAPPTPPPP 987



 Score = 26.9 bits (58), Expect = 9.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 138 PPSMGPAAPGPGPTPPPPGRRERQRRSNSSSASVA 172
           PP+ G AAP P  T            S+SSS+S +
Sbjct: 68  PPATGGAAPNPATTTAASSSSSSSSSSSSSSSSAS 102


>gi|91199550 CD68 antigen isoform B [Homo sapiens]
          Length = 327

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 10/116 (8%)

Query: 51  GLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGKASA---PRPASHLYSKLRPRLVSVT 107
           GL A STGTT         ++  R    G +  G  +A   P   SH    + P   S T
Sbjct: 13  GLLAESTGTTSHRTTKSHKTTTHRTTTTGTTSHGPTTATHNPTTTSHGNVTVHPTSNS-T 71

Query: 108 VSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMG------PAAPGPGPTPPPPGR 157
            ++  PS    SPA  S         S++T  S G      P  P P P+P P  +
Sbjct: 72  ATSQGPSTATHSPATTSHGNATVHPTSNSTATSPGFTSSAHPEPPPPSPSPSPTSK 127


>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
           sapiens]
          Length = 647

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 49/182 (26%), Positives = 68/182 (37%), Gaps = 20/182 (10%)

Query: 8   LPSESSSWSAVAGGLGAQPAQSG----SWPAAGAASSRRMKYSLPSDGLCALSTGTTPGG 63
           LP   S  SA A   GA   +SG         GAA+ R  +   P+ G+  L+ GT P  
Sbjct: 268 LPRLLSMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGV-GLARGTAPQP 326

Query: 64  APSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPAN- 122
           A + A ++  RA   G +   +  A R  +H   + R R  +   ++     W P P   
Sbjct: 327 ASTWALAARPRA---GGTWTSRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQ 383

Query: 123 -------CSSSGKDEAAASSTTPPSMGPAAPGP----GPTPPPPGRRERQRRSNSSSASV 171
                   S   + +       P   GPA  GP    G  P PP  R   RR +      
Sbjct: 384 RPRRLPRASLQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPR 443

Query: 172 AP 173
           AP
Sbjct: 444 AP 445



 Score = 29.6 bits (65), Expect = 1.4
 Identities = 40/151 (26%), Positives = 49/151 (32%), Gaps = 15/151 (9%)

Query: 20  GGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCAL-----STGTTPGGAPSG-AHSSCR 73
           GG  A     G  PA G   +R       S    A       T T+   A  G AH   +
Sbjct: 299 GGAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTWTSRFEAQRGCAHQDGQ 358

Query: 74  RAVRPGL----SVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKD 129
           R  R G     S   +  +P P      +L PR          P   +PS A  +  G  
Sbjct: 359 RRTRDGAGNHASEPARVWSPPPRRQRPRRL-PRASLQEEPKRRPPCARPSGAGPAREGPA 417

Query: 130 EAAASSTTPPSMGPAA----PGPGPTPPPPG 156
                + TPP   P      P PGP  P  G
Sbjct: 418 AWPGGAPTPPHARPTGRRQDPEPGPRAPRGG 448


>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
           sapiens]
          Length = 647

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 49/182 (26%), Positives = 68/182 (37%), Gaps = 20/182 (10%)

Query: 8   LPSESSSWSAVAGGLGAQPAQSG----SWPAAGAASSRRMKYSLPSDGLCALSTGTTPGG 63
           LP   S  SA A   GA   +SG         GAA+ R  +   P+ G+  L+ GT P  
Sbjct: 268 LPRLLSMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGV-GLARGTAPQP 326

Query: 64  APSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPAN- 122
           A + A ++  RA   G +   +  A R  +H   + R R  +   ++     W P P   
Sbjct: 327 ASTWALAARPRA---GGTWTSRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQ 383

Query: 123 -------CSSSGKDEAAASSTTPPSMGPAAPGP----GPTPPPPGRRERQRRSNSSSASV 171
                   S   + +       P   GPA  GP    G  P PP  R   RR +      
Sbjct: 384 RPRRLPRASLQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPR 443

Query: 172 AP 173
           AP
Sbjct: 444 AP 445



 Score = 29.6 bits (65), Expect = 1.4
 Identities = 40/151 (26%), Positives = 49/151 (32%), Gaps = 15/151 (9%)

Query: 20  GGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCAL-----STGTTPGGAPSG-AHSSCR 73
           GG  A     G  PA G   +R       S    A       T T+   A  G AH   +
Sbjct: 299 GGAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTWTSRFEAQRGCAHQDGQ 358

Query: 74  RAVRPGL----SVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKD 129
           R  R G     S   +  +P P      +L PR          P   +PS A  +  G  
Sbjct: 359 RRTRDGAGNHASEPARVWSPPPRRQRPRRL-PRASLQEEPKRRPPCARPSGAGPAREGPA 417

Query: 130 EAAASSTTPPSMGPAA----PGPGPTPPPPG 156
                + TPP   P      P PGP  P  G
Sbjct: 418 AWPGGAPTPPHARPTGRRQDPEPGPRAPRGG 448


>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
          Length = 1970

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 45/154 (29%), Positives = 59/154 (38%), Gaps = 17/154 (11%)

Query: 9    PSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGA 68
            P  S +WS   G  G+    S   P+ G A S    YS  S      S G     +PS +
Sbjct: 1559 PGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSP--SYSPTSPAYEPRSPGGYTPQSPSYS 1616

Query: 69   HSSCRRAVRPGLSVAGKASAPR-----PASHLYSKLRPRL--VSVTVSTSSP--SAWKPS 119
             +S      P  S    + +P      P S  YS   P     S + S +SP  S   PS
Sbjct: 1617 PTS------PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1670

Query: 120  PANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPP 153
             +  S S    + + S T PS  P +P   PT P
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704



 Score = 38.1 bits (87), Expect = 0.004
 Identities = 44/155 (28%), Positives = 60/155 (38%), Gaps = 16/155 (10%)

Query: 14   SWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGT---------TPGGA 64
            +WS   G  G  P  +G  P+A + +S       P+      S G+         +PGGA
Sbjct: 1530 AWSPSVGS-GMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGA 1588

Query: 65   PSGAHSSCRRAVRPGLSVAGKASAPR--PASHLYSKLRPRL--VSVTVSTSSPSAWKPSP 120
             S ++S    A  P         +P   P S  YS   P     S   S +SPS    SP
Sbjct: 1589 MSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP 1648

Query: 121  --ANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPP 153
              +  S S    + + S T PS  P +P   PT P
Sbjct: 1649 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683



 Score = 33.1 bits (74), Expect = 0.13
 Identities = 38/141 (26%), Positives = 50/141 (35%), Gaps = 10/141 (7%)

Query: 23   GAQPAQSGSW-PAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLS 81
            G    QS S+ P + + S     YS  S      S   +P        S       P  S
Sbjct: 1606 GGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1665

Query: 82   VAGKASAPR-----PASHLYSKLRPRL--VSVTVSTSSP--SAWKPSPANCSSSGKDEAA 132
                + +P      P S  YS   P     S + S +SP  S   PS +  S S    + 
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725

Query: 133  ASSTTPPSMGPAAPGPGPTPP 153
            + S T PS  P +P   PT P
Sbjct: 1726 SYSPTSPSYSPTSPSYSPTSP 1746



 Score = 32.7 bits (73), Expect = 0.17
 Identities = 36/137 (26%), Positives = 47/137 (34%), Gaps = 9/137 (6%)

Query: 26   PAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGK 85
            P      P + + S     YS  S      S   +P        S       P  S    
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSP 1788

Query: 86   ASAPR-----PASHLYSKLRPRLV--SVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTP 138
            + +P      P S  YS   PR    S T + SSPS    SP+   +S K    + S +P
Sbjct: 1789 SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSP 1848

Query: 139  --PSMGPAAPGPGPTPP 153
              P   P +P   PT P
Sbjct: 1849 SSPEYTPTSPKYSPTSP 1865



 Score = 32.3 bits (72), Expect = 0.22
 Identities = 36/139 (25%), Positives = 49/139 (35%), Gaps = 10/139 (7%)

Query: 25   QPAQSGSW-PAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVA 83
            +P   G + P + + S     YS  S      S   +P        S       P  S  
Sbjct: 1601 EPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1660

Query: 84   GKASAPR-----PASHLYSKLRPRL--VSVTVSTSSP--SAWKPSPANCSSSGKDEAAAS 134
              + +P      P S  YS   P     S + S +SP  S   PS +  S S    + + 
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720

Query: 135  STTPPSMGPAAPGPGPTPP 153
            S T PS  P +P   PT P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSP 1739



 Score = 32.0 bits (71), Expect = 0.29
 Identities = 35/137 (25%), Positives = 46/137 (33%), Gaps = 9/137 (6%)

Query: 26   PAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGK 85
            P      P + + S     YS  S      S   +P        S       P  S    
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1676

Query: 86   ASAPR-----PASHLYSKLRPRL--VSVTVSTSSP--SAWKPSPANCSSSGKDEAAASST 136
            + +P      P S  YS   P     S + S +SP  S   PS +  S S    + + S 
Sbjct: 1677 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736

Query: 137  TPPSMGPAAPGPGPTPP 153
            T PS  P +P   PT P
Sbjct: 1737 TSPSYSPTSPNYSPTSP 1753



 Score = 32.0 bits (71), Expect = 0.29
 Identities = 34/137 (24%), Positives = 46/137 (33%), Gaps = 9/137 (6%)

Query: 26   PAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGK 85
            P      P + + S     YS  S      S   +P        S       P  S    
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1697

Query: 86   ASAPR-----PASHLYSKLRPRL--VSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTP 138
            + +P      P S  YS   P     S + S +SPS    SP+   +S      + + TP
Sbjct: 1698 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTP 1757

Query: 139  --PSMGPAAPGPGPTPP 153
              PS  P +P   PT P
Sbjct: 1758 TSPSYSPTSPSYSPTSP 1774



 Score = 31.2 bits (69), Expect = 0.49
 Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 2/130 (1%)

Query: 26   PAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGK 85
            P      P + + S     YS  S      S   +P        S       P  S    
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767

Query: 86   ASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTP--PSMGP 143
            + +P   ++  +       S + S +SPS    SP+   SS +    + + TP  PS  P
Sbjct: 1768 SYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSP 1827

Query: 144  AAPGPGPTPP 153
            ++P   PT P
Sbjct: 1828 SSPSYSPTSP 1837



 Score = 29.6 bits (65), Expect = 1.4
 Identities = 32/137 (23%), Positives = 45/137 (32%), Gaps = 9/137 (6%)

Query: 26   PAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGK 85
            P      P + + S     YS  S      S   +P        S       P  S    
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1718

Query: 86   ASAPR-----PASHLYSKLRPRL--VSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTP 138
            + +P      P S  YS   P     S   S +SP+    SP+   +S      + + TP
Sbjct: 1719 SYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTP 1778

Query: 139  --PSMGPAAPGPGPTPP 153
              P+  P +P   PT P
Sbjct: 1779 TSPNYSPTSPSYSPTSP 1795



 Score = 28.9 bits (63), Expect = 2.4
 Identities = 33/137 (24%), Positives = 44/137 (32%), Gaps = 9/137 (6%)

Query: 26   PAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGK 85
            P      P + + S     YS  S      S   +P        S       P  S    
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725

Query: 86   ASAPR-----PASHLYSKLRPRL--VSVTVSTSSPSAWKPSPANCSSSGKDEAAAS--ST 136
            + +P      P S  YS   P     S   + +SPS    SP+   +S      +   S 
Sbjct: 1726 SYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSP 1785

Query: 137  TPPSMGPAAPGPGPTPP 153
            T PS  P +P   PT P
Sbjct: 1786 TSPSYSPTSPSYSPTSP 1802



 Score = 28.9 bits (63), Expect = 2.4
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 91   PASHLYSKLRPRLV--SVTVSTSSPSAWKPSPANCSSSGKDEAAAS--STTPPSMGPAAP 146
            P+S  YS   P+    S + S SSP     SP    +S K    +   S T P+  P  P
Sbjct: 1827 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1886

Query: 147  GPGPTPP 153
               PT P
Sbjct: 1887 KYSPTSP 1893



 Score = 28.1 bits (61), Expect = 4.2
 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 6/103 (5%)

Query: 57   TGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPR--PASHLYSKLRPRLV--SVTVSTSS 112
            T T+P  +P+    S         S +   S+PR  P S  Y+   P     S + S +S
Sbjct: 1777 TPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTS 1836

Query: 113  PSAWKPSPANCSSSGK--DEAAASSTTPPSMGPAAPGPGPTPP 153
            P     SP+   SS +    +   S T P   P +P   PT P
Sbjct: 1837 PKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1879



 Score = 27.7 bits (60), Expect = 5.4
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 12/99 (12%)

Query: 57   TGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPR--PASHLYSKLRPRLVSVTVSTSSPS 114
            T T+P  +PS    +         S     ++P+  P S  YS   P+      S +SP+
Sbjct: 1840 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY-----SPTSPT 1894

Query: 115  AWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPP 153
                SP    +S K      S T P+  P +P   PT P
Sbjct: 1895 YSPTSPVYTPTSPK-----YSPTSPTYSPTSPKYSPTSP 1928



 Score = 26.9 bits (58), Expect = 9.3
 Identities = 29/130 (22%), Positives = 41/130 (31%), Gaps = 2/130 (1%)

Query: 26   PAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGK 85
            P      P + + S     YS  S      S   TP        S       P  +    
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSP 1781

Query: 86   ASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTP--PSMGP 143
              +P   S+  +       S + S SSP     SP    SS     ++ S +P  P   P
Sbjct: 1782 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTP 1841

Query: 144  AAPGPGPTPP 153
             +P   P+ P
Sbjct: 1842 TSPSYSPSSP 1851



 Score = 26.9 bits (58), Expect = 9.3
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 91   PASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCS-SSGKDEAAASSTTPPSMGPAAPGPG 149
            P S +Y+   P+  S T  T SP++ K SP + + S    + +  S T P   P +P   
Sbjct: 1897 PTSPVYTPTSPKY-SPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1955

Query: 150  PTPP 153
             T P
Sbjct: 1956 LTSP 1959


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 9/163 (5%)

Query: 23   GAQPAQSGSWPAAGAASSRRMKYSLPSD------GLCALSTGTTPGGAPSGAHSSCRRAV 76
            GA+ ++S S  ++G++SS     S  S+      G      G   GG    A SS   + 
Sbjct: 2553 GAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASP 2612

Query: 77   RPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASST 136
                S +  +S+   +S   S       S + S+SS S+   S ++ SSS    +++SST
Sbjct: 2613 ASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSST 2672

Query: 137  TPPSMGPAA---PGPGPTPPPPGRRERQRRSNSSSASVAPLAH 176
            T      ++     P PT  P  +     ++   +    P AH
Sbjct: 2673 TDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAH 2715



 Score = 35.8 bits (81), Expect = 0.020
 Identities = 29/119 (24%), Positives = 48/119 (40%)

Query: 2    ASEAAVLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTP 61
            AS ++   S SSS S+ +    +  + S S  ++ ++SS     S  S    + S+ ++ 
Sbjct: 2613 ASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSST 2672

Query: 62   GGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSP 120
                S   S    A  P    + +A+ P  A+    K RP   S    T +P    P P
Sbjct: 2673 TDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPAPQPQAPPP 2731



 Score = 35.0 bits (79), Expect = 0.034
 Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)

Query: 2    ASEAAVLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTP 61
            +S ++   S SSS S+ + G   +  + G     G   +     S  S    + ++ ++ 
Sbjct: 2559 SSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSS 2618

Query: 62   GGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPA 121
              + S + SS   +     S +  +S+   +S   S       S + S+SS S+   +  
Sbjct: 2619 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---SSSSSSSSSSSSSTTDE 2675

Query: 122  NCSSSGKDEAAASSTTPPSM----------------------GPAAPGPGPTPPPP 155
            + S S  DEAA + T  PS                       G   P P P  PPP
Sbjct: 2676 DSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPAPQPQAPPP 2731



 Score = 31.6 bits (70), Expect = 0.38
 Identities = 30/121 (24%), Positives = 40/121 (33%), Gaps = 12/121 (9%)

Query: 33   PAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGLSVAGKASAPRPA 92
            PA    S++R       D      TG    G  +G+     +A   G   + KA   R A
Sbjct: 2293 PALLVPSAKRRSRKTSKD------TGEGKDGGTAGSEEPGAKARGRGRKPSAKAKGDRAA 2346

Query: 93   SHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTP 152
            +         +       S+P A +PS    S     E        P   PA P P P P
Sbjct: 2347 TLEEGNPTDEV------PSTPLALEPSSTPGSKKSPPEPVDKRAKAPKARPAPPQPSPAP 2400

Query: 153  P 153
            P
Sbjct: 2401 P 2401



 Score = 28.9 bits (63), Expect = 2.4
 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 15/92 (16%)

Query: 79   GLSVAGKASAPRPASHLYSKLRPRLVSVTVST-----SSPSAWKPSPANCSSS------- 126
            GL  AGKA        L  +  P L +    T     S P + + SP     +       
Sbjct: 954  GLEAAGKAGLATAGPGLLPRKPPGLAAGPAGTYGKAVSPPPSPRASPVAALKAKVIQKLE 1013

Query: 127  --GKDEAAASSTTPPSMGPAAPGPGPTPPPPG 156
               K  A A   TP S  P +P P   PP PG
Sbjct: 1014 DVSKPPAYAYPATPSSH-PTSPPPASPPPTPG 1044


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 44/163 (26%), Positives = 62/163 (38%), Gaps = 20/163 (12%)

Query: 16  SAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSG-AHSSCRR 74
           +A AG LG          AAGA  +       P++G    + G  P   P+G A      
Sbjct: 52  AAAAGALGNHVVSGSPAGAAGAGPAA------PAEG----APGAAPEPPPAGRARPGGGG 101

Query: 75  AVRPGLSVAGKASAPRPASHLYSKLRP-------RLVSVTVSTSSPSAWKPSPANCSSSG 127
             RPG     +   P   +   +KLRP           V  + +  +  +P+PA  +   
Sbjct: 102 PQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPA 161

Query: 128 KDEAAASSTTP-PSMGPAAPGPGPTPPPPGRRERQRRSNSSSA 169
              A A+   P P  GP  PGPGP P  P      +  N S+A
Sbjct: 162 GPAALAARAGPGPGPGPG-PGPGPGPGKPAGPGAAQTLNGSAA 203



 Score = 38.1 bits (87), Expect = 0.004
 Identities = 43/153 (28%), Positives = 60/153 (39%), Gaps = 19/153 (12%)

Query: 21  GLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPGL 80
           G  A PA +   P+  AA +     + P     A +T   P G P+G  ++      P  
Sbjct: 245 GAAAPPAPAA--PSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAA 302

Query: 81  SV----AGKASAPRPASH----LYSKLRPRLVSVT----VSTSSPS----AWKPSPANCS 124
           +     AG A AP PA+     +  +  P   +      V   SP     A  P+    +
Sbjct: 303 AQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLA 362

Query: 125 SSGKDEAAASSTTPPSMGPAAPGPGPTPPP-PG 156
           +SG    AAS    P+M  A P P   PPP PG
Sbjct: 363 ASGPASTAASMVIGPTMQGALPSPAAVPPPAPG 395



 Score = 34.7 bits (78), Expect = 0.044
 Identities = 45/180 (25%), Positives = 61/180 (33%), Gaps = 30/180 (16%)

Query: 16  SAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPG-GAPSG------- 67
           +A A   G +PA +G    AG A+        P  G      G  PG G P+G       
Sbjct: 142 AAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGP---GPGPGPGPGKPAGPGAAQTL 198

Query: 68  ----AHSSCRRAVRPGLSVAGKASA-----PRPASHLYSKLRPRLVSVTV-----STSSP 113
               A  +   A  P +S+     A     P+PA+       P  V         + S P
Sbjct: 199 NGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPP 258

Query: 114 SAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQRRSNSSSASVAP 173
           +A  P+    +      A A+   PP      P   P  PPP   +     N  SA  AP
Sbjct: 259 AAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQ-----NGGSAGAAP 313


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 36/136 (26%), Positives = 46/136 (33%), Gaps = 4/136 (2%)

Query: 20   GGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPG 79
            GG      +    P A    S +   + PS          TP   PS   S        G
Sbjct: 975  GGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTP---PSPKGSPAATPFPKG 1031

Query: 80   LSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPP 139
             S    A+ P P     +   P+    T + + PS  K  PA  S  G     A++   P
Sbjct: 1032 ASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP-KGGPATPSLKGAPTPPAATPPSP 1090

Query: 140  SMGPAAPGPGPTPPPP 155
              GPA P P   P PP
Sbjct: 1091 KGGPATPSPKGAPMPP 1106



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 16/141 (11%)

Query: 20   GGLGAQPAQSG-SWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRP 78
            GGL   P +   + PAA   S +    + P  G       TTP   P             
Sbjct: 1138 GGLATPPPKGAPTTPAATPPSPKGGLATPPPKG-----APTTPAATPPSPKGGLATPSPK 1192

Query: 79   GLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPAN--CSSSGKDEAAASST 136
            G      A+ P P   L +       S   + ++P+A  PSP     + S K      + 
Sbjct: 1193 GAPTTPAATPPSPKGGLATP------SPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1246

Query: 137  TPPSM--GPAAPGPGPTPPPP 155
            TPPS   GPA P P   P PP
Sbjct: 1247 TPPSPKGGPATPPPKGAPTPP 1267



 Score = 34.3 bits (77), Expect = 0.058
 Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 7/74 (9%)

Query: 105  SVTVST----SSPSAWKPSPANCSSSGKDEAAASSTTPPS--MGPAAPGPGPTP-PPPGR 157
            +VT ST     SP      PA  S S K+     + TPPS   GPA P P  TP  PP  
Sbjct: 1584 AVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVT 1643

Query: 158  RERQRRSNSSSASV 171
                + S +S ASV
Sbjct: 1644 PSSLKDSPTSPASV 1657



 Score = 33.9 bits (76), Expect = 0.076
 Identities = 17/49 (34%), Positives = 22/49 (44%)

Query: 107  TVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPP 155
            T   ++P + K  PA  S  G     A++   P  GPA P P   P PP
Sbjct: 964  TPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPP 1012



 Score = 31.2 bits (69), Expect = 0.49
 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 7/83 (8%)

Query: 78  PGLSVAGKASAPRPASHLYS-KLRPRLVSVTVSTSSPSAWKPSPAN--CSSSGKDEAAAS 134
           P LS+   +S+P+ A    + K  P   S   + + P+A  PSP     + S K      
Sbjct: 909 PALSMT--SSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPP 966

Query: 135 STTPPSM--GPAAPGPGPTPPPP 155
           + TPPS   GPA P P   P PP
Sbjct: 967 AATPPSPKGGPATPSPKGAPTPP 989



 Score = 30.4 bits (67), Expect = 0.84
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 86   ASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAA 145
            A  P  A+    K  P   S   + + P+A  PSP    ++   + A    TPP+  P +
Sbjct: 939  APTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAP---TPPAATPPS 995

Query: 146  PGPGPTPPPP 155
            P  GP  P P
Sbjct: 996  PKGGPATPSP 1005



 Score = 29.6 bits (65), Expect = 1.4
 Identities = 35/139 (25%), Positives = 50/139 (35%), Gaps = 15/139 (10%)

Query: 21   GLGAQPAQSGS-WPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRAVRPG 79
            G+ A P+  G+  P A    S +   + PS          TP     G  +   +    G
Sbjct: 929  GIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPK----G 984

Query: 80   LSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTPP 139
                  A+ P P      K  P   S   + + P+   PSP    ++      AS  TPP
Sbjct: 985  APTPPAATPPSP------KGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAS--TPP 1036

Query: 140  SMGPAAP--GPGPTPPPPG 156
            +  P +P   P  TP P G
Sbjct: 1037 AATPPSPKGSPAATPLPKG 1055



 Score = 29.6 bits (65), Expect = 1.4
 Identities = 36/120 (30%), Positives = 45/120 (37%), Gaps = 28/120 (23%)

Query: 59   TTPGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYS-KLRPRLVSVTVSTSSPSAWK 117
            T P   P     S      P  +   K +   PA+ L S K  P   S+  + + P+A  
Sbjct: 1034 TPPAATPPSPKGS------PAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATP 1087

Query: 118  PSP----ANCSSSGKDEAAASS--------TTPPSMG----PAAPGPGP-----TPPPPG 156
            PSP    A  S  G     A++         TPP  G    PAA  P P     TPPP G
Sbjct: 1088 PSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKG 1147



 Score = 29.3 bits (64), Expect = 1.9
 Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 18/95 (18%)

Query: 61   PGGAPSGAHSSCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSP 120
            P GAP+   ++   +++ GL+      AP PA               V+  SP   K  P
Sbjct: 1260 PKGAPTPP-AATPPSLKGGLATPPHKGAPNPA--------------VVTPPSP---KGGP 1301

Query: 121  ANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPP 155
            A     G     A++   P   P  P P   P PP
Sbjct: 1302 ATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPP 1336



 Score = 28.9 bits (63), Expect = 2.4
 Identities = 40/163 (24%), Positives = 50/163 (30%), Gaps = 18/163 (11%)

Query: 5    AAVLPSESSSWSAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTP--- 61
            AA LPS         GG      +    P A    S +   + PS     +    TP   
Sbjct: 1061 AATLPSPK-------GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSP 1113

Query: 62   -GGAPSGAHSSCRR--AVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKP 118
             GG  +  H       A  P     G A+ P   +       P      ++T  P     
Sbjct: 1114 KGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPT 1173

Query: 119  SPANCSSSGKDEAAASSTTPPSMGPAAPGPGP-----TPPPPG 156
            +PA    S K   A  S       PAA  P P     TP P G
Sbjct: 1174 TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKG 1216



 Score = 28.5 bits (62), Expect = 3.2
 Identities = 17/45 (37%), Positives = 20/45 (44%)

Query: 111  SSPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPP 155
            SSP A  PS    + S K+     + T PS   A   P  TPP P
Sbjct: 1580 SSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSP 1624



 Score = 26.9 bits (58), Expect = 9.3
 Identities = 42/189 (22%), Positives = 59/189 (31%), Gaps = 40/189 (21%)

Query: 20   GGLGA-QPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTP---GGAPSGAHSSCRR- 74
            GGL    P  + + PAA   S +    + P  G       T P   GG  +  H      
Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNP 1289

Query: 75   -AVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAA 133
              V P     G A++P   +       P     +  T  P      PA    S K     
Sbjct: 1290 AVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTL 1349

Query: 134  SSTTP---------------------------PSMGPAAPGPGPTPPPPGRRERQRRSNS 166
             +TTP                           P+M P +P  GP  P P       + + 
Sbjct: 1350 PATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSP-------KGDP 1402

Query: 167  SSASVAPLA 175
            +S +V PL+
Sbjct: 1403 TSPAVIPLS 1411


>gi|7662162 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 15/180 (8%)

Query: 6   AVLPSESSSWSAVAGGLGAQPAQ-SGSWPAAGAASSRRMKYSL-PSDGLC-ALSTGTTPG 62
           AV P+ SS+ +    G  AQ A  +G  P A +     M  ++ P  G+  AL     P 
Sbjct: 97  AVAPAASSAEAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPA 156

Query: 63  --GAPSGAHS-----SCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSA 115
             GAP  A +     + R AV PG  V  +A+AP   +       P  V+     +SP+ 
Sbjct: 157 MAGAPKVAEAPREAETSRAAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTE 216

Query: 116 WKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQRRSNSSSASVAPLA 175
              +P   + +G     A++ T  +  P   G   T   PG    ++ +  +     P A
Sbjct: 217 AAEAPVPATPTG-----AAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPKA 271


>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
          Length = 977

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 50/168 (29%), Positives = 62/168 (36%), Gaps = 36/168 (21%)

Query: 16  SAVAGGLGAQ-PAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTP----GGAPSGAHS 70
           +A+  G G Q P ++ S P   A         LP   L A      P    GGAP+ A S
Sbjct: 411 AAMLNGEGLQSPPRAQSAPPEAAV--------LPPSPLPAPVASPRPFQPGGGAPTPAPS 462

Query: 71  SCRRAVRP---GL--------SVAGKASAPRPASHLYSKLRPR------------LVSVT 107
              R+ RP   GL        SV  +  AP+ A+     L P             L S T
Sbjct: 463 IFNRSARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPLPSFT 522

Query: 108 VSTSSPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPP 155
               S +    SP+   SSG   A +S   P    P  PG  P PP P
Sbjct: 523 SGVPSHAPVSGSPSTPRSSGPVTATSSLYIPAPSRPVTPGGAPEPPAP 570



 Score = 35.8 bits (81), Expect = 0.020
 Identities = 41/145 (28%), Positives = 55/145 (37%), Gaps = 13/145 (8%)

Query: 26  PAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHS--SCRRAVRPGLSVA 83
           P   G  P   +   R +     +D L  LS    P  +  G     S    V     V+
Sbjct: 473 PGLQGQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPLPSFTSGVPSHAPVS 532

Query: 84  GKASAPRPA------SHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTT 137
           G  S PR +      S LY     R V+   +   P+   PS A  +S+       S+  
Sbjct: 533 GSPSTPRSSGPVTATSSLYIPAPSRPVTPGGAPEPPAP--PSAAAMTSTAS--IFLSAPL 588

Query: 138 PPSMGPAAPGPGP-TPPPPGRRERQ 161
            PS  P AP PGP  P PP  RE++
Sbjct: 589 RPSARPEAPAPGPGAPEPPSAREQR 613



 Score = 27.3 bits (59), Expect = 7.1
 Identities = 21/78 (26%), Positives = 27/78 (34%), Gaps = 17/78 (21%)

Query: 88  APRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSG----------KDEAAASSTT 137
           AP+P S         L+   V+ ++ SA  P P      G           D      T 
Sbjct: 726 APKPPSR-------GLLDGLVNGAASSAGIPEPPRLQGRGGELFAKRQSRADRYVVEGTP 778

Query: 138 PPSMGPAAPGPGPTPPPP 155
            P +GP    P PTP  P
Sbjct: 779 GPGLGPRPRSPSPTPSLP 796


>gi|29540562 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 15/180 (8%)

Query: 6   AVLPSESSSWSAVAGGLGAQPAQ-SGSWPAAGAASSRRMKYSL-PSDGLC-ALSTGTTPG 62
           AV P+ SS+ +    G  AQ A  +G  P A +     M  ++ P  G+  AL     P 
Sbjct: 97  AVAPAASSAEAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPA 156

Query: 63  --GAPSGAHS-----SCRRAVRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSA 115
             GAP  A +     + R AV PG  V  +A+AP   +       P  V+     +SP+ 
Sbjct: 157 MAGAPKVAEAPREAETSRAAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTE 216

Query: 116 WKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPPGRRERQRRSNSSSASVAPLA 175
              +P   + +G     A++ T  +  P   G   T   PG    ++ +  +     P A
Sbjct: 217 AAEAPVPATPTG-----AAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPKA 271


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.306    0.119    0.356 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,139,526
Number of Sequences: 37866
Number of extensions: 680534
Number of successful extensions: 13889
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 1159
Number of HSP's that attempted gapping in prelim test: 7655
Number of HSP's gapped (non-prelim): 5624
length of query: 177
length of database: 18,247,518
effective HSP length: 95
effective length of query: 82
effective length of database: 14,650,248
effective search space: 1201320336
effective search space used: 1201320336
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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