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Search of human proteins with 239745455
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
(304 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 639 0.0
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 639 0.0
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 533 e-152
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 51 1e-06
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 50 2e-06
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 50 2e-06
gi|153792074 proline rich 12 [Homo sapiens] 50 3e-06
gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo ... 49 7e-06
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 48 1e-05
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 48 1e-05
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 48 1e-05
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 47 2e-05
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 47 2e-05
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 47 2e-05
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 46 4e-05
gi|239748084 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 46 5e-05
gi|169167808 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 45 6e-05
gi|113417039 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 45 6e-05
gi|113416520 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 45 6e-05
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 45 8e-05
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 45 8e-05
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 45 8e-05
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 45 8e-05
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 639 bits (1649), Expect = 0.0
Identities = 304/304 (100%), Positives = 304/304 (100%)
Query: 1 MLHISGKESVSLLQMKSVQWLQKVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPS 60
MLHISGKESVSLLQMKSVQWLQKVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPS
Sbjct: 1 MLHISGKESVSLLQMKSVQWLQKVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPS 60
Query: 61 LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG 120
LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG
Sbjct: 61 LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG 120
Query: 121 ARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARA 180
ARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARA
Sbjct: 121 ARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARA 180
Query: 181 TAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRG 240
TAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRG
Sbjct: 181 TAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRG 240
Query: 241 AGGRGGAQRIPPRPLRRLVPIHPHPSHWSFCTRLLEGWAPAVTHSERLVAAHTYTHIHTH 300
AGGRGGAQRIPPRPLRRLVPIHPHPSHWSFCTRLLEGWAPAVTHSERLVAAHTYTHIHTH
Sbjct: 241 AGGRGGAQRIPPRPLRRLVPIHPHPSHWSFCTRLLEGWAPAVTHSERLVAAHTYTHIHTH 300
Query: 301 VLQR 304
VLQR
Sbjct: 301 VLQR 304
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 639 bits (1649), Expect = 0.0
Identities = 304/304 (100%), Positives = 304/304 (100%)
Query: 1 MLHISGKESVSLLQMKSVQWLQKVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPS 60
MLHISGKESVSLLQMKSVQWLQKVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPS
Sbjct: 1 MLHISGKESVSLLQMKSVQWLQKVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPS 60
Query: 61 LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG 120
LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG
Sbjct: 61 LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG 120
Query: 121 ARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARA 180
ARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARA
Sbjct: 121 ARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARA 180
Query: 181 TAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRG 240
TAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRG
Sbjct: 181 TAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRG 240
Query: 241 AGGRGGAQRIPPRPLRRLVPIHPHPSHWSFCTRLLEGWAPAVTHSERLVAAHTYTHIHTH 300
AGGRGGAQRIPPRPLRRLVPIHPHPSHWSFCTRLLEGWAPAVTHSERLVAAHTYTHIHTH
Sbjct: 241 AGGRGGAQRIPPRPLRRLVPIHPHPSHWSFCTRLLEGWAPAVTHSERLVAAHTYTHIHTH 300
Query: 301 VLQR 304
VLQR
Sbjct: 301 VLQR 304
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 533 bits (1373), Expect = e-152
Identities = 256/258 (99%), Positives = 257/258 (99%)
Query: 1 MLHISGKESVSLLQMKSVQWLQKVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPS 60
MLHISGKESVSLLQMKSVQWLQKVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPS
Sbjct: 1 MLHISGKESVSLLQMKSVQWLQKVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPS 60
Query: 61 LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG 120
LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG
Sbjct: 61 LGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG 120
Query: 121 ARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARA 180
ARSRGCHSPSCCRSSSCAWHRWPQLRGREA+PRASPALLICIAPRPRPALPAALHIGARA
Sbjct: 121 ARSRGCHSPSCCRSSSCAWHRWPQLRGREADPRASPALLICIAPRPRPALPAALHIGARA 180
Query: 181 TAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRG 240
TAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRG
Sbjct: 181 TAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRG 240
Query: 241 AGGRGGAQRIPPRPLRRL 258
AGGRGGAQRIPP PLRRL
Sbjct: 241 AGGRGGAQRIPPWPLRRL 258
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 50.8 bits (120), Expect = 1e-06
Identities = 62/196 (31%), Positives = 74/196 (37%), Gaps = 45/196 (22%)
Query: 68 GSAILRAGSRSPRG---AGPGAAGPRAAGRGGAGGG---GRCCT---RGRGRFPCAGSGG 118
G A L+A P G GP A R GRG GGG R T RG P AG
Sbjct: 84 GGARLQATRTWPAGILEGGPQVAA-RGGGRGWEGGGLGARRAVTAARRGGASRPLAGEPW 142
Query: 119 RGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGA 178
R A R R C +W + R + ASP + P PA+ + G
Sbjct: 143 REAARR--------RPQQCP--QWGRARESRSAALASPRV------SNAPTTPASRNPGL 186
Query: 179 RATAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGR 238
RA + +RA A G RA PP P RP G G+ R A
Sbjct: 187 RAQERQSGRRA----------AGGGGARAEPPRVPPCRPAGCSGGNRSRRAA-------- 228
Query: 239 RGAGGRGGAQRIPPRP 254
GAG R ++ PPRP
Sbjct: 229 -GAGPRTTRRKPPPRP 243
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 50.4 bits (119), Expect = 2e-06
Identities = 71/253 (28%), Positives = 93/253 (36%), Gaps = 47/253 (18%)
Query: 67 AGSAILRAGSR--SPRGAGPGAAGPRAAGR-GGAGGGGRCCTRGRGRFPCAGSGGRGARS 123
AG I R G PR G G G GGAGGGG G+GR G G R +
Sbjct: 589 AGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGS--GEGQGR----GPGSRVSVR 642
Query: 124 RGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAG 183
R +PS CR++S A R A SPA + + + + AR
Sbjct: 643 RSSRAPSSCRAASLAPPR--PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDR 700
Query: 184 LAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGG 243
+A+R P+ S +AR R++ P P P R +P+ G
Sbjct: 701 RSARRGGPR--SWRPSARASWVRSTTPRGPEASSPRARGSFLPKSG-------------- 744
Query: 244 RGGAQRIPPRPLRRLV-------PIHPHPSHW-------SFCTRLLEGWAPAVTHSERLV 289
GG+ PPRP R L P+ P W R L +PA R +
Sbjct: 745 -GGS---PPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPA--PGRRAL 798
Query: 290 AAHTYTHIHTHVL 302
AA H H + L
Sbjct: 799 AARAANHAHVNTL 811
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 50.4 bits (119), Expect = 2e-06
Identities = 71/253 (28%), Positives = 93/253 (36%), Gaps = 47/253 (18%)
Query: 67 AGSAILRAGSR--SPRGAGPGAAGPRAAGR-GGAGGGGRCCTRGRGRFPCAGSGGRGARS 123
AG I R G PR G G G GGAGGGG G+GR G G R +
Sbjct: 589 AGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGS--GEGQGR----GPGSRVSVR 642
Query: 124 RGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAG 183
R +PS CR++S A R A SPA + + + + AR
Sbjct: 643 RSSRAPSSCRAASLAPPR--PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDR 700
Query: 184 LAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGG 243
+A+R P+ S +AR R++ P P P R +P+ G
Sbjct: 701 RSARRGGPR--SWRPSARASWVRSTTPRGPEASSPRARGSFLPKSG-------------- 744
Query: 244 RGGAQRIPPRPLRRLV-------PIHPHPSHW-------SFCTRLLEGWAPAVTHSERLV 289
GG+ PPRP R L P+ P W R L +PA R +
Sbjct: 745 -GGS---PPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPA--PGRRAL 798
Query: 290 AAHTYTHIHTHVL 302
AA H H + L
Sbjct: 799 AARAANHAHVNTL 811
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 49.7 bits (117), Expect = 3e-06
Identities = 54/183 (29%), Positives = 65/183 (35%), Gaps = 22/183 (12%)
Query: 48 PLRAKRTVLSSPSLGGG---PAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGG--- 101
P R L+ LGGG P AG S + GA A GP AAG GGAGGGG
Sbjct: 321 PSMGHRANLACSPLGGGEPSPGAGEPSKAGPSGATAGASGRATGPEAAGGGGAGGGGGGY 380
Query: 102 RCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLIC 161
R + G G GG GA + G P RS++ + + PA
Sbjct: 381 RPIIQSPGY--KTGKGGYGAAAGGATRPPPPRSTATP----------KCQSLGGPAAAYA 428
Query: 162 IAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTA---ARGRRTRASPPTPPR-PRP 217
GL +A Q G A ++ PP PP P P
Sbjct: 429 TGKASGAGGAGGQAYSPGQPQGLLGPQAYGQGFGGGQAQDLSKAPSYSGGPPQPPSGPPP 488
Query: 218 PGL 220
PGL
Sbjct: 489 PGL 491
Score = 29.3 bits (64), Expect = 4.5
Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 20/101 (19%)
Query: 180 ATAGLAAKRAQPQLCSAGTAARG----RRTRASP-----------PTPPRPRPPGLRSGD 224
ATAG + + P+ G A G R SP RPP RS
Sbjct: 354 ATAGASGRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRSTA 413
Query: 225 VPR----GGARVERPTGRR-GAGGRGGAQRIPPRPLRRLVP 260
P+ GG TG+ GAGG GG P +P L P
Sbjct: 414 TPKCQSLGGPAAAYATGKASGAGGAGGQAYSPGQPQGLLGP 454
Score = 28.5 bits (62), Expect = 7.7
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 48 PLRAKRTVLSSPSLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRG 107
PL++ P +G A G + + +P A PGA G AAG GG G +G
Sbjct: 567 PLQSPPATGRPPGVGSPGAPGKYLSSVLASAPFLAPPGA-GSYAAGAGGYKG------KG 619
Query: 108 RGRFPCAGSGG 118
G AG GG
Sbjct: 620 DGSELLAGPGG 630
>gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo
sapiens]
Length = 245
Score = 48.5 bits (114), Expect = 7e-06
Identities = 72/237 (30%), Positives = 85/237 (35%), Gaps = 56/237 (23%)
Query: 53 RTVLSSPSL-----GGGPAAGSAILRAGSRSPRGAG-----PGAAGPRAAGRGGAGGGGR 102
RTV PS G GSA L G+R R G PG G A+ R GGR
Sbjct: 12 RTVAIKPSAFSRRNPGREKDGSASLE-GARRQRRVGSRQRTPGPDGQDASPRAREEDGGR 70
Query: 103 CCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICI 162
RG + S+ C++ R R + GR P A
Sbjct: 71 ---ERRGGL---------SHSKDCNAARNARGKHLRRTRRRRTLGRRCRPPAP------- 111
Query: 163 APRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASP-------PTP--- 212
PRPRP AL +A + A R +P G RG + P PTP
Sbjct: 112 RPRPRPRRKLALD---QAATRIPAARPRPP----GPGGRGSHWKIQPGVQRLPRPTPSAQ 164
Query: 213 PRPRPPGLRSGDVP-----RGGA----RVERPTGRRGAGGRGGAQRIPPRPLRRLVP 260
PRP PP R P RGG R RR GG ++R RP RRL P
Sbjct: 165 PRPGPPERRRASRPLIGCGRGGGGTWRRAADSRWRRPGGGFQRSRREKARPPRRLPP 221
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 47.8 bits (112), Expect = 1e-05
Identities = 74/242 (30%), Positives = 87/242 (35%), Gaps = 73/242 (30%)
Query: 76 SRSPRGAGPGAAGPRAAGRGG-AGGGGRCCTRGRGR---------FPCAGSGGRG----A 121
+RSPRG PRA G GG AGGGG R RG C G G G +
Sbjct: 32 ARSPRG-------PRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVS 84
Query: 122 RSRGCHSPSCCRSS-------------------------SCAWHRWPQLRGREAEPRASP 156
G P+ R+S S ++ +LR R A A P
Sbjct: 85 SGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSAS--ALP 142
Query: 157 ALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAAR----GRRTR------ 206
A +C P+ A P G R G A+ RA+ +A AAR G R+R
Sbjct: 143 APRLC----PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAG 198
Query: 207 -----ASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGGAQRIPPRPLRRLVPI 261
A P RPR G R G R GA G R A G R P R R L P
Sbjct: 199 RDAALACAQLPRRPRGAGARRGMRRRLGA------GERPAPRPRGPPRAPARGARWLRPR 252
Query: 262 HP 263
P
Sbjct: 253 RP 254
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 47.8 bits (112), Expect = 1e-05
Identities = 74/242 (30%), Positives = 87/242 (35%), Gaps = 73/242 (30%)
Query: 76 SRSPRGAGPGAAGPRAAGRGG-AGGGGRCCTRGRGR---------FPCAGSGGRG----A 121
+RSPRG PRA G GG AGGGG R RG C G G G +
Sbjct: 32 ARSPRG-------PRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVS 84
Query: 122 RSRGCHSPSCCRSS-------------------------SCAWHRWPQLRGREAEPRASP 156
G P+ R+S S ++ +LR R A A P
Sbjct: 85 SGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSAS--ALP 142
Query: 157 ALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAAR----GRRTR------ 206
A +C P+ A P G R G A+ RA+ +A AAR G R+R
Sbjct: 143 APRLC----PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAG 198
Query: 207 -----ASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGGAQRIPPRPLRRLVPI 261
A P RPR G R G R GA G R A G R P R R L P
Sbjct: 199 RDAALACAQLPRRPRGAGARRGMRRRLGA------GERPAPRPRGPPRAPARGARWLRPR 252
Query: 262 HP 263
P
Sbjct: 253 RP 254
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 47.8 bits (112), Expect = 1e-05
Identities = 52/179 (29%), Positives = 64/179 (35%), Gaps = 41/179 (22%)
Query: 57 SSPSLG------GGPAAGSAILRAGSRSPRGAG------PGAAGPRAAGRGGAGGGGRCC 104
++P+LG GGP AG+ L G R PR A A PRA+ G GGGG
Sbjct: 45 AAPALGRRGKGSGGPEAGADGLSRGERGPRRAAVPELSAQPAGSPRASLAGSDGGGG--- 101
Query: 105 TRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAP 164
G ARS G R S R ++PR P P
Sbjct: 102 -------------GGSARSSGISLGYDQRHGSP--------RSGRSDPRPGPG-----PP 135
Query: 165 RPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSG 223
A + +G+R +AG A P C A + A P P P PPG G
Sbjct: 136 SVGSARSSVSSLGSRGSAGAYADFLPPGACPAPARSPEPAGPAPFPLPALPLPPGREGG 194
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 47.0 bits (110), Expect = 2e-05
Identities = 58/200 (29%), Positives = 71/200 (35%), Gaps = 26/200 (13%)
Query: 47 APLRAKRTVLSSPSLGGGPAAGSAILRAGSR-------SPRGAGPGAAGPRAAGRGGAGG 99
AP K S GGG AGS + S S AG GA+ AA AGG
Sbjct: 186 APKPCKTVTTSGAKAGGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGG 245
Query: 100 GGRCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRS---SSCAWHRWPQLRG---REAEPR 153
GG + +G G GA +RG SP +S + H P P
Sbjct: 246 GGSTAS-------TSGGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPPAGSPPPLTLPPT 298
Query: 154 ASPALLICIAPR--PRPALPAALHIGA----RATAGLAAKRAQPQLCSAGTAARGRRTRA 207
SPA + A P PA P L A R G A ++ + + T
Sbjct: 299 PSPATAVTAASAQPPGPAPPITLEPPAPGLKRGREGGRASTRDRKMLKFISGIFTKSTGG 358
Query: 208 SPPTPPRPRPPGLRSGDVPR 227
P + P P PP L SG R
Sbjct: 359 PPGSGPLPGPPSLSSGSGSR 378
Score = 30.0 bits (66), Expect = 2.6
Identities = 48/200 (24%), Positives = 65/200 (32%), Gaps = 53/200 (26%)
Query: 59 PSLGGG----PAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCA 114
P L GG P G A SR P + P GP GR G G G P
Sbjct: 121 PPLSGGLSPDPKPGGA--PTSSRRPLLSSPSWGGPEPEGRAGGGIPG-------SSSPHP 171
Query: 115 GSGGRGAR-SRGCHSPSCCRSSSCAWHR------------WPQLRGREAEPRASPALLIC 161
G+G R + + +P C++ + + + WP+ G+ PR +
Sbjct: 172 GTGSRRLKVAPPPPAPKPCKTVTTSGAKAGGGKGAGSRLSWPESEGK---PRVKGS---- 224
Query: 162 IAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGT-AARGRRTRASP----------- 209
+ + + A ATA A S G A G R + SP
Sbjct: 225 -----KSSAGTGASVSAAATAAAAGGGGSTASTSGGVGAGAGARGKLSPRKGKSKTLDNS 279
Query: 210 ---PTPPRPRPPGLRSGDVP 226
P PP PP L P
Sbjct: 280 DLHPGPPAGSPPPLTLPPTP 299
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 47.0 bits (110), Expect = 2e-05
Identities = 62/203 (30%), Positives = 77/203 (37%), Gaps = 50/203 (24%)
Query: 64 GPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARS 123
GP G + RA SP A P AA A GR +GG G +RG+G G R +R+
Sbjct: 125 GPRPGCSSARA---SPAPAAPQAAARTAPGRAASGGSGP-GSRGQGSDQV---GARPSRA 177
Query: 124 RGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAG 183
G P CR A PR S P RP LP + +R +G
Sbjct: 178 GGQPPPLTCRRC-------------RAAPRRS------ARPFRRPGLP----LKSRPGSG 214
Query: 184 LAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPR------GGARVERPTG 237
A+ S GT G P T P S D P+ G RV G
Sbjct: 215 TGAR-------SCGTWGSG----GGPGTAAASSPSADFSSDSPQPIIIFGGALRVRGCGG 263
Query: 238 RRGAGGRG---GAQRIPPRPLRR 257
RR + G+G G + + P P RR
Sbjct: 264 RRRSNGQGTQPGCRLLSPAPPRR 286
Score = 33.9 bits (76), Expect = 0.18
Identities = 61/231 (26%), Positives = 75/231 (32%), Gaps = 70/231 (30%)
Query: 81 GAGPGAAGPRAAGRGGAGGGGR-----------CCTRGRGRFPCAGSGGRGAR-SRGCHS 128
G GPG + P G G GGR C+ G C + R +R RG S
Sbjct: 5 GPGPGGSYPITFGCGARACGGRRANFSLSAAFRTCSSGT----CRLTRSRKSRLERGTFS 60
Query: 129 PSCCRSSSCAWHRWPQLRGREA----EPRA------------------------SPALLI 160
P + + P R R A PR S + L
Sbjct: 61 PESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLR 120
Query: 161 CIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGT--AARG---------------- 202
AP PRP +A A A AA+ A + S G+ +RG
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQ 180
Query: 203 ------RRTRASPPTPPRP-RPPGLRSGDVPRGGARVERPTGRRGAGGRGG 246
RR RA+P RP R PGL P G R G G+GG G
Sbjct: 181 PPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGA-RSCGTWGSGGGPG 230
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 47.0 bits (110), Expect = 2e-05
Identities = 62/203 (30%), Positives = 77/203 (37%), Gaps = 50/203 (24%)
Query: 64 GPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARS 123
GP G + RA SP A P AA A GR +GG G +RG+G G R +R+
Sbjct: 125 GPRPGCSSARA---SPAPAAPQAAARTAPGRAASGGSGP-GSRGQGSDQV---GARPSRA 177
Query: 124 RGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAG 183
G P CR A PR S P RP LP + +R +G
Sbjct: 178 GGQPPPLTCRRC-------------RAAPRRS------ARPFRRPGLP----LKSRPGSG 214
Query: 184 LAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPR------GGARVERPTG 237
A+ S GT G P T P S D P+ G RV G
Sbjct: 215 TGAR-------SCGTWGSG----GGPGTAAASSPSADFSSDSPQPIIIFGGALRVRGCGG 263
Query: 238 RRGAGGRG---GAQRIPPRPLRR 257
RR + G+G G + + P P RR
Sbjct: 264 RRRSNGQGTQPGCRLLSPAPPRR 286
Score = 33.9 bits (76), Expect = 0.18
Identities = 61/231 (26%), Positives = 75/231 (32%), Gaps = 70/231 (30%)
Query: 81 GAGPGAAGPRAAGRGGAGGGGR-----------CCTRGRGRFPCAGSGGRGAR-SRGCHS 128
G GPG + P G G GGR C+ G C + R +R RG S
Sbjct: 5 GPGPGGSYPITFGCGARACGGRRANFSLSAAFRTCSSGT----CRLTRSRKSRLERGTFS 60
Query: 129 PSCCRSSSCAWHRWPQLRGREA----EPRA------------------------SPALLI 160
P + + P R R A PR S + L
Sbjct: 61 PESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLR 120
Query: 161 CIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGT--AARG---------------- 202
AP PRP +A A A AA+ A + S G+ +RG
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQ 180
Query: 203 ------RRTRASPPTPPRP-RPPGLRSGDVPRGGARVERPTGRRGAGGRGG 246
RR RA+P RP R PGL P G R G G+GG G
Sbjct: 181 PPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGA-RSCGTWGSGGGPG 230
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 47.0 bits (110), Expect = 2e-05
Identities = 62/203 (30%), Positives = 77/203 (37%), Gaps = 50/203 (24%)
Query: 64 GPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARS 123
GP G + RA SP A P AA A GR +GG G +RG+G G R +R+
Sbjct: 125 GPRPGCSSARA---SPAPAAPQAAARTAPGRAASGGSGP-GSRGQGSDQV---GARPSRA 177
Query: 124 RGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAG 183
G P CR A PR S P RP LP + +R +G
Sbjct: 178 GGQPPPLTCRRC-------------RAAPRRS------ARPFRRPGLP----LKSRPGSG 214
Query: 184 LAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPR------GGARVERPTG 237
A+ S GT G P T P S D P+ G RV G
Sbjct: 215 TGAR-------SCGTWGSG----GGPGTAAASSPSADFSSDSPQPIIIFGGALRVRGCGG 263
Query: 238 RRGAGGRG---GAQRIPPRPLRR 257
RR + G+G G + + P P RR
Sbjct: 264 RRRSNGQGTQPGCRLLSPAPPRR 286
Score = 33.9 bits (76), Expect = 0.18
Identities = 61/231 (26%), Positives = 75/231 (32%), Gaps = 70/231 (30%)
Query: 81 GAGPGAAGPRAAGRGGAGGGGR-----------CCTRGRGRFPCAGSGGRGAR-SRGCHS 128
G GPG + P G G GGR C+ G C + R +R RG S
Sbjct: 5 GPGPGGSYPITFGCGARACGGRRANFSLSAAFRTCSSGT----CRLTRSRKSRLERGTFS 60
Query: 129 PSCCRSSSCAWHRWPQLRGREA----EPRA------------------------SPALLI 160
P + + P R R A PR S + L
Sbjct: 61 PESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLR 120
Query: 161 CIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGT--AARG---------------- 202
AP PRP +A A A AA+ A + S G+ +RG
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQ 180
Query: 203 ------RRTRASPPTPPRP-RPPGLRSGDVPRGGARVERPTGRRGAGGRGG 246
RR RA+P RP R PGL P G R G G+GG G
Sbjct: 181 PPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGA-RSCGTWGSGGGPG 230
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 46.2 bits (108), Expect = 4e-05
Identities = 67/247 (27%), Positives = 86/247 (34%), Gaps = 46/247 (18%)
Query: 54 TVLSSPSLGGGPAAGSAILRAGS---RSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGR 110
T S+P L G+++L AGS GAG G G G GGAGGGG G
Sbjct: 3 TAASNPYL-----PGNSLLAAGSIVHSDAAGAGGGGGGGGGGGGGGAGGGGG------GM 51
Query: 111 FPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPAL 170
P + + GA S +S + A ++ ++ A + AL
Sbjct: 52 QPGSAAVTSGAYRGDPSSVKMVQSDFM----------QGAMAASNGGHMLSHAHQWVTAL 101
Query: 171 PAALHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGA 230
P A A A A AA A + G SP PP+P PP + DV G
Sbjct: 102 PHAA--AAAAAAAAAAVEASSPWSGSAVGMAG-----SPQQPPQPPPPPPQGPDVKGGAG 154
Query: 231 RVERPTGRRGAGGRGGAQRIPPRPLRRLVPIHPHPSHWSFCTRLLEGWAPAVTHSERLVA 290
R + G RG PP P PH H GW A + A
Sbjct: 155 RDDLHAG-TALHHRGPPHLGPPPP-------PPHQGHPG-------GWGAAAAAAAAAAA 199
Query: 291 AHTYTHI 297
A H+
Sbjct: 200 AAAAAHL 206
>gi|239748084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 45.8 bits (107), Expect = 5e-05
Identities = 59/214 (27%), Positives = 74/214 (34%), Gaps = 34/214 (15%)
Query: 80 RGAGPGAAG-PRAAGRGGAGGGGR----CCTRGRGRFPCAGSGGR------------GAR 122
R PG G PR GG G GG+ C+ G GR C G+GG AR
Sbjct: 137 RQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGR-RCGGAGGNVPVFFLINDAHAAAR 195
Query: 123 SRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPA---------LPAA 173
SP+ + + + W RGR A P + L + P A LP
Sbjct: 196 GSCALSPALGLAENGPGNEW--YRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPP 253
Query: 174 LHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASPPT-----PPRPRPPGLRSGDVPRG 228
G GL ++ + A GR AS PP P G R
Sbjct: 254 PGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRR 313
Query: 229 GARVERPTGRRGAGGRGGAQRIPPRPLRRLVPIH 262
G R RP+GR G G A + L +P H
Sbjct: 314 GRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPH 347
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 45.8 bits (107), Expect = 5e-05
Identities = 72/224 (32%), Positives = 80/224 (35%), Gaps = 53/224 (23%)
Query: 74 AGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGR------GARSRGCH 127
AG S R AG GAAG R G G GG G T R GS + +RG
Sbjct: 32 AGVESRRRAGEGAAGRRDGGWGPPGGAGDHQTLQRASLLPGGSADKDQEREPSLAARGTA 91
Query: 128 SPSCCRSSSCAWHRWPQLRGREAEPRASPA-----LLICIAPRPRPALPAALHIGARA-- 180
P+ R C P L G PR P +AP PR PA AR
Sbjct: 92 PPAPPR--QCLPTPCPPL-GHGLRPRPPPGTPPPRCPRTLAPGPRGLFPAPPPAPARTGP 148
Query: 181 TAGLAAKRAQPQLCSAGTAARGRRTRASPPTPP---------RPRPPGL----------R 221
AA R +P G AA GRR R SP PP R P L R
Sbjct: 149 AGKAAADRGRP-----GPAA-GRRVRRSPSFPPFLLAQTRLGRTGPLALCLLLLLHGAMR 202
Query: 222 SGDVPRGGARVERPTGR--------RGAGGRGGAQRIPPRPLRR 257
G GG+R + GR RG GGR + R RR
Sbjct: 203 LG----GGSREKLACGRAGRAARTGRGEGGRRAEEEAAGRRRRR 242
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 45.8 bits (107), Expect = 5e-05
Identities = 23/57 (40%), Positives = 25/57 (43%)
Query: 81 GAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSC 137
G G +G GG+G GG CC C G GG G GC SCC SS C
Sbjct: 30 GCCGSCCGCGGSGCGGSGCGGSCCGSSCCGSGCGGCGGCGGCGGGCCGSSCCGSSCC 86
>gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 45.4 bits (106), Expect = 6e-05
Identities = 59/175 (33%), Positives = 69/175 (39%), Gaps = 38/175 (21%)
Query: 81 GAGPGAAGPRAA-----GRGGAGGGGRCCTRGRGRFPCA-GSGGRGARSRGCHSPSCCRS 134
GA P PRAA R G GG G R +G A S RGAR R CR
Sbjct: 14 GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRA--PGRTCRG 71
Query: 135 SSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLC 194
GR E A +L P++P G R G AA +QP LC
Sbjct: 72 GP----------GRGYESAAGNSL---------PSVPGG---GGRDPGGGAA--SQPGLC 107
Query: 195 S-AGTAARGRRTRASPPT-PPRPRPPGLRSGDVPRGGARVERPTGRRGAGG-RGG 246
AGT + + R T P+ R P LR+ PR + RP AGG RGG
Sbjct: 108 GRAGTGEKRKWERPGKETWKPKTRRPRLRA---PRAALLLPRPRTHGPAGGTRGG 159
Score = 35.8 bits (81), Expect = 0.048
Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 13/137 (9%)
Query: 46 RAPLRAKRTVLSSPSLGGG----PAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGG 101
+ P A+R S GG P A + RA S + RGA A G RGG G G
Sbjct: 20 KPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC--RGGPGRGY 77
Query: 102 RCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREA------EPRAS 155
G G GGR P C + R + G+E PR
Sbjct: 78 ESAA-GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
Query: 156 PALLICIAPRPRPALPA 172
+ PRPR PA
Sbjct: 137 APRAALLLPRPRTHGPA 153
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 45.4 bits (106), Expect = 6e-05
Identities = 60/186 (32%), Positives = 73/186 (39%), Gaps = 19/186 (10%)
Query: 55 VLSSPSLGGGPAAGSAILRAG-SRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPC 113
+LS PS P G+A+ R+G S PRG G AAG + G A G G RG P
Sbjct: 271 LLSMPSAAARPC-GAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVG--LARGTAPQP- 326
Query: 114 AGSGGRGARSR--GCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALP 171
A + AR R G + CA H+ Q R R+ + +P PR P
Sbjct: 327 ASTWALAARPRAGGTWTSRFEAQRGCA-HQDGQRRTRDGAGNHASEPARVWSPPPRRQRP 385
Query: 172 AALHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASP---PTPPRPRPPGLRSGD---- 224
L RA+ KR P +G A P PTPP RP G R
Sbjct: 386 RRL---PRASLQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGP 442
Query: 225 -VPRGG 229
PRGG
Sbjct: 443 RAPRGG 448
Score = 36.2 bits (82), Expect = 0.037
Identities = 81/316 (25%), Positives = 105/316 (33%), Gaps = 61/316 (19%)
Query: 25 GCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSP-SLGG--GPAAGSAI----LRAGSR 77
G ++RA + F + AP + P +L G GPAA LR
Sbjct: 152 GGRRRRAADTLFQLGPAWPALPAPAAGRALGTDEPLALRGQCGPAARRGCAQEQLRNAPW 211
Query: 78 SPRGAGPGA-------AGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARSRGCHSPS 130
+PR P A R AGR GAG C RGR P +G + + R + P
Sbjct: 212 APRAHSPAGRLALGLIAPRRGAGRAGAGAAA-CGRRGRIAAPLSGVVQKASYLRPKNLPR 270
Query: 131 CCRSSSCA------------WHRWPQLRGREAEPRAS----PALLICIA--PRPRPALPA 172
S A + P+ RG A R S PA + +A P+PA
Sbjct: 271 LLSMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVGLARGTAPQPASTW 330
Query: 173 ALHIGARATAGLAAKRAQPQLCSAGTAARGRR----------TRASPPTPPRPRP---PG 219
AL RA ++ + C+ R R R P P R RP P
Sbjct: 331 ALAARPRAGGTWTSRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQRPRRLPR 390
Query: 220 LRSGDVPRGGARVERPTG----RRGAGGRGGAQRIPP--RPLRRLVPIHPHP-------- 265
+ P+ RP+G R G G PP RP R P P
Sbjct: 391 ASLQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPA 450
Query: 266 -SHWSFCTRLLEGWAP 280
S W + GW P
Sbjct: 451 SSGWHAGSAAGRGWDP 466
Score = 33.9 bits (76), Expect = 0.18
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 75 GSRSPRGAGPGAAG---PRAAGRG-GAGGGGRC---CTRGRGRFPCAGSGGRGARSRGCH 127
G R+PRG GP ++G AAGRG GGG R RGRG C S +R
Sbjct: 441 GPRAPRG-GPASSGWHAGSAAGRGWDPGGGSRARRRAARGRG---CLRSARSSPHARPLG 496
Query: 128 SPSCCRSSSCAWHRWPQLRGRE 149
S R A R P L RE
Sbjct: 497 SSRSVRLLRSAAGRGPSLDSRE 518
Score = 30.8 bits (68), Expect = 1.6
Identities = 60/212 (28%), Positives = 73/212 (34%), Gaps = 42/212 (19%)
Query: 88 GPRAAGRGGAGGGGRCCTRGRGRF------PCAGSGGRGARSRGCHSPSCCRSSSCAWHR 141
G R+ GR G G GGR F P + G R+ G P R C
Sbjct: 140 GRRSCGREGQGRGGRRRRAADTLFQLGPAWPALPAPAAG-RALGTDEPLALR-GQCG--- 194
Query: 142 WPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAAR 201
P R A+ + R P P A R GL A R AG AA
Sbjct: 195 -PAARRGCAQEQL----------RNAPWAPRAHSPAGRLALGLIAPRRGAGRAGAGAAAC 243
Query: 202 GRRTR-ASPPTPPRPRPPGLRSGDVPR-----------GGARVE------RPTGRRG-AG 242
GRR R A+P + + LR ++PR GA + RP GR G A
Sbjct: 244 GRRGRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRGGAAA 303
Query: 243 GRGGAQRIPPRPLRRLVPIHPHP-SHWSFCTR 273
GRG P + P P S W+ R
Sbjct: 304 GRGSRGEHPACGVGLARGTAPQPASTWALAAR 335
>gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 45.4 bits (106), Expect = 6e-05
Identities = 59/175 (33%), Positives = 69/175 (39%), Gaps = 38/175 (21%)
Query: 81 GAGPGAAGPRAA-----GRGGAGGGGRCCTRGRGRFPCA-GSGGRGARSRGCHSPSCCRS 134
GA P PRAA R G GG G R +G A S RGAR R CR
Sbjct: 14 GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRA--PGRTCRG 71
Query: 135 SSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLC 194
GR E A +L P++P G R G AA +QP LC
Sbjct: 72 GP----------GRGYESAAGNSL---------PSVPGG---GGRDPGGGAA--SQPGLC 107
Query: 195 S-AGTAARGRRTRASPPT-PPRPRPPGLRSGDVPRGGARVERPTGRRGAGG-RGG 246
AGT + + R T P+ R P LR+ PR + RP AGG RGG
Sbjct: 108 GRAGTGEKRKWERPGKETWKPKTRRPRLRA---PRAALLLPRPRTHGPAGGTRGG 159
Score = 35.8 bits (81), Expect = 0.048
Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 13/137 (9%)
Query: 46 RAPLRAKRTVLSSPSLGGG----PAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGG 101
+ P A+R S GG P A + RA S + RGA A G RGG G G
Sbjct: 20 KPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC--RGGPGRGY 77
Query: 102 RCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREA------EPRAS 155
G G GGR P C + R + G+E PR
Sbjct: 78 ESAA-GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
Query: 156 PALLICIAPRPRPALPA 172
+ PRPR PA
Sbjct: 137 APRAALLLPRPRTHGPA 153
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 45.4 bits (106), Expect = 6e-05
Identities = 49/165 (29%), Positives = 57/165 (34%), Gaps = 16/165 (9%)
Query: 94 RGGAGGGGRCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPR 153
+GG GGGG+ R R P + ARS P C + A P
Sbjct: 9 QGGGGGGGQGRHRHSSRAPGTRTPATPARSP---RPPLCAPRPAPGRAQSPVPAAGAVP- 64
Query: 154 ASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCS----AGTAARGRRTRASP 209
+ PA P R PA G T G +P L G RGR + P
Sbjct: 65 SPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPP 124
Query: 210 PTPPRPRPPGLRSGDVPRGGARVERPTGRRG--AGGRGGAQRIPP 252
P P R PP P GG R G AGG G +R PP
Sbjct: 125 PNPSRRLPP------APPGGRRTWLSALATGPAAGGAGRRRRSPP 163
Score = 44.7 bits (104), Expect = 1e-04
Identities = 57/156 (36%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 115 GSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPA----- 169
G GG G + R HS R P R A P SP +C APRP P
Sbjct: 10 GGGGGGGQGRHRHSS-----------RAPGTR-TPATPARSPRPPLC-APRPAPGRAQSP 56
Query: 170 LPAALHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASP--PTPPRPRPPGLRSGDVPR 227
+PAA GA + AA A+P L T A GRR RA+ P RPP S R
Sbjct: 57 VPAA---GAVPSPPAAAHPARPAL-RGETPAPGRRGRATTRGEVQPSVRPP--LSHRPLR 110
Query: 228 GGARVERPTGRRGAGGRGGAQRIPPRPLRRLVPIHP 263
GG RG G+G PP P RRL P P
Sbjct: 111 GGGM------GRGRPGKGP----PPNPSRRLPPAPP 136
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 45.4 bits (106), Expect = 6e-05
Identities = 60/186 (32%), Positives = 73/186 (39%), Gaps = 19/186 (10%)
Query: 55 VLSSPSLGGGPAAGSAILRAG-SRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPC 113
+LS PS P G+A+ R+G S PRG G AAG + G A G G RG P
Sbjct: 271 LLSMPSAAARPC-GAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVG--LARGTAPQP- 326
Query: 114 AGSGGRGARSR--GCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALP 171
A + AR R G + CA H+ Q R R+ + +P PR P
Sbjct: 327 ASTWALAARPRAGGTWTSRFEAQRGCA-HQDGQRRTRDGAGNHASEPARVWSPPPRRQRP 385
Query: 172 AALHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASP---PTPPRPRPPGLRSGD---- 224
L RA+ KR P +G A P PTPP RP G R
Sbjct: 386 RRL---PRASLQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGP 442
Query: 225 -VPRGG 229
PRGG
Sbjct: 443 RAPRGG 448
Score = 36.2 bits (82), Expect = 0.037
Identities = 81/316 (25%), Positives = 105/316 (33%), Gaps = 61/316 (19%)
Query: 25 GCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSP-SLGG--GPAAGSAI----LRAGSR 77
G ++RA + F + AP + P +L G GPAA LR
Sbjct: 152 GGRRRRAADTLFQLGPAWPALPAPAAGRALGTDEPLALRGQCGPAARRGCAQEQLRNAPW 211
Query: 78 SPRGAGPGA-------AGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARSRGCHSPS 130
+PR P A R AGR GAG C RGR P +G + + R + P
Sbjct: 212 APRAHSPAGRLALGLIAPRRGAGRAGAGAAA-CGRRGRIAAPLSGVVQKASYLRPKNLPR 270
Query: 131 CCRSSSCA------------WHRWPQLRGREAEPRAS----PALLICIA--PRPRPALPA 172
S A + P+ RG A R S PA + +A P+PA
Sbjct: 271 LLSMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVGLARGTAPQPASTW 330
Query: 173 ALHIGARATAGLAAKRAQPQLCSAGTAARGRR----------TRASPPTPPRPRP---PG 219
AL RA ++ + C+ R R R P P R RP P
Sbjct: 331 ALAARPRAGGTWTSRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQRPRRLPR 390
Query: 220 LRSGDVPRGGARVERPTG----RRGAGGRGGAQRIPP--RPLRRLVPIHPHP-------- 265
+ P+ RP+G R G G PP RP R P P
Sbjct: 391 ASLQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPA 450
Query: 266 -SHWSFCTRLLEGWAP 280
S W + GW P
Sbjct: 451 SSGWHAGSAAGRGWDP 466
Score = 34.3 bits (77), Expect = 0.14
Identities = 34/100 (34%), Positives = 40/100 (40%), Gaps = 12/100 (12%)
Query: 52 KRTVLSSPSLGGGPAA-GSAILRAGSRSPRGAGPGAA------GPRAAGRGGAGGGGRC- 103
+R + PS G GPA G A G+ +P A P GPRA G A G
Sbjct: 399 RRPPCARPS-GAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAG 457
Query: 104 CTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWP 143
GRG P GG AR R C RS+ + H P
Sbjct: 458 SAAGRGWDP---GGGSRARRRAARGRGCLRSARSSPHARP 494
Score = 32.7 bits (73), Expect = 0.41
Identities = 31/82 (37%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 75 GSRSPRGAGPGAAG---PRAAGRG-GAGGGGRC---CTRGRGRFPCAGSGGRGARSRGCH 127
G R+PRG GP ++G AAGRG GGG R RGRG C S +R
Sbjct: 441 GPRAPRG-GPASSGWHAGSAAGRGWDPGGGSRARRRAARGRG---CLRSARSSPHARPLG 496
Query: 128 SPSCCRSSSCAWHRWPQLRGRE 149
S R A + P L RE
Sbjct: 497 SSRSVRLLRSAAGKGPSLDSRE 518
Score = 30.8 bits (68), Expect = 1.6
Identities = 60/212 (28%), Positives = 73/212 (34%), Gaps = 42/212 (19%)
Query: 88 GPRAAGRGGAGGGGRCCTRGRGRF------PCAGSGGRGARSRGCHSPSCCRSSSCAWHR 141
G R+ GR G G GGR F P + G R+ G P R C
Sbjct: 140 GRRSCGREGQGRGGRRRRAADTLFQLGPAWPALPAPAAG-RALGTDEPLALR-GQCG--- 194
Query: 142 WPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAAR 201
P R A+ + R P P A R GL A R AG AA
Sbjct: 195 -PAARRGCAQEQL----------RNAPWAPRAHSPAGRLALGLIAPRRGAGRAGAGAAAC 243
Query: 202 GRRTR-ASPPTPPRPRPPGLRSGDVPR-----------GGARVE------RPTGRRG-AG 242
GRR R A+P + + LR ++PR GA + RP GR G A
Sbjct: 244 GRRGRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRGGAAA 303
Query: 243 GRGGAQRIPPRPLRRLVPIHPHP-SHWSFCTR 273
GRG P + P P S W+ R
Sbjct: 304 GRGSRGEHPACGVGLARGTAPQPASTWALAAR 335
>gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 45.4 bits (106), Expect = 6e-05
Identities = 59/175 (33%), Positives = 69/175 (39%), Gaps = 38/175 (21%)
Query: 81 GAGPGAAGPRAA-----GRGGAGGGGRCCTRGRGRFPCA-GSGGRGARSRGCHSPSCCRS 134
GA P PRAA R G GG G R +G A S RGAR R CR
Sbjct: 14 GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRA--PGRTCRG 71
Query: 135 SSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLC 194
GR E A +L P++P G R G AA +QP LC
Sbjct: 72 GP----------GRGYESAAGNSL---------PSVPGG---GGRDPGGGAA--SQPGLC 107
Query: 195 S-AGTAARGRRTRASPPT-PPRPRPPGLRSGDVPRGGARVERPTGRRGAGG-RGG 246
AGT + + R T P+ R P LR+ PR + RP AGG RGG
Sbjct: 108 GRAGTGEKRKWERPGKETWKPKTRRPRLRA---PRAALLLPRPRTHGPAGGTRGG 159
Score = 35.8 bits (81), Expect = 0.048
Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 13/137 (9%)
Query: 46 RAPLRAKRTVLSSPSLGGG----PAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGG 101
+ P A+R S GG P A + RA S + RGA A G RGG G G
Sbjct: 20 KPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC--RGGPGRGY 77
Query: 102 RCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREA------EPRAS 155
G G GGR P C + R + G+E PR
Sbjct: 78 ESAA-GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
Query: 156 PALLICIAPRPRPALPA 172
+ PRPR PA
Sbjct: 137 APRAALLLPRPRTHGPA 153
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 45.4 bits (106), Expect = 6e-05
Identities = 51/162 (31%), Positives = 60/162 (37%), Gaps = 18/162 (11%)
Query: 56 LSSPSLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAG 115
+SSPSL AG A AG G GP G G G GG G G P G
Sbjct: 120 ISSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGG-----GGGGGPGGG 174
Query: 116 SGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPAL-PAAL 174
GG G G S H G + P A+ A+ + + P P L AA
Sbjct: 175 GGGPGGGLLG---------GSAHPHPHMHSLGHLSHPAAAAAMNM-PSGLPHPGLVAAAA 224
Query: 175 HIGARATAGLAA--KRAQPQLCSAGTAARGRRTRASPPTPPR 214
H GA A A AA + A +A A G + T PR
Sbjct: 225 HHGAAAAAAAAAAGQVAAASAAAAVVGAAGLASICDSDTDPR 266
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 45.1 bits (105), Expect = 8e-05
Identities = 54/161 (33%), Positives = 65/161 (40%), Gaps = 41/161 (25%)
Query: 74 AGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAG---SGGRGARSRGCHSPS 130
A R+P A + AGR A G + +RGRG P AG SGGR RG +P
Sbjct: 425 ARRRNPGAAARAKLAGQRAGRARARTGSQVGSRGRGWGPGAGRVPSGGR----RGVGNP- 479
Query: 131 CCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQ 190
RW G A PR S LL P LPA AR T R +
Sbjct: 480 ---------ERW---GGEAAAPRPSRVLL--------PELPAV--DPARDT------RRE 511
Query: 191 PQLCSAGTAARGR--RTRASPPTP---PRPRPPGLRSGDVP 226
P + T GR + +PP+ PRPRP L G+ P
Sbjct: 512 PDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDSLSPGEPP 552
Score = 30.0 bits (66), Expect = 2.6
Identities = 57/220 (25%), Positives = 69/220 (31%), Gaps = 45/220 (20%)
Query: 72 LRAGSRSPRGAGPGAAGPRAAGR-----GGAGGGGRCCT----RGRGRFPCAGSGGRGAR 122
LR ++PR A PR GG G G R R FP + + G G
Sbjct: 298 LRLAGQAPRTQPACPAAPRMQQTEREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVS 357
Query: 123 SRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATA 182
+ R + R R EA R A A R A +G R
Sbjct: 358 PQAGARVGEAREAVTTHERAHLDREGEARARLGQAA----AQMRREGWGARAKLGGRGVC 413
Query: 183 GLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAG 242
G C G R R +P R + G R+G R AR G RG G
Sbjct: 414 GK---------CGPGPWDDPARRR-NPGAAARAKLAGQRAG---RARARTGSQVGSRGRG 460
Query: 243 GRGGAQRIP-------------------PRPLRRLVPIHP 263
GA R+P PRP R L+P P
Sbjct: 461 WGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELP 500
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 45.1 bits (105), Expect = 8e-05
Identities = 59/180 (32%), Positives = 74/180 (41%), Gaps = 28/180 (15%)
Query: 78 SPRGAGPGAAGPRAA--GRGGAGGGGRCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSS 135
SPR PG+A P +A GRGGAG R C G G+ A +G G R P+ S
Sbjct: 52 SPRA--PGSAQPISAPEGRGGAGSRSRYC-HGDGKLAAAAAGTVGPR----WLPAGQCLS 104
Query: 136 SCAWHRWPQLRGREAEP-RASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLC 194
R P+ G + P ASPA RP + P A A A P+
Sbjct: 105 EAERPRRPEPGGARSRPVAASPAASSRARSRPESS-PGAPGSSVPALLPSLPPLAAPRPL 163
Query: 195 SAGTAARGRRTRASPPTPPRPRPPGLRSGDVPR----GGARVERPTGR-RGAGGRGGAQR 249
SA R PP+P+P L G+ PR GG+R +P G RG R +R
Sbjct: 164 SARPRLR----------PPQPQPLALTVGNGPRAPPAGGSR--QPRGSVRGPRARAAEER 211
Score = 30.8 bits (68), Expect = 1.6
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 8/56 (14%)
Query: 197 GTAARGRRTRASPPTPPRPRPPG--------LRSGDVPRGGARVERPTGRRGAGGR 244
G A R +SPP+ P P+ P L S P + P GR GAG R
Sbjct: 19 GAALSCTRVGSSPPSAPLPQTPPTKRPERFRLHSPRAPGSAQPISAPEGRGGAGSR 74
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 45.1 bits (105), Expect = 8e-05
Identities = 54/161 (33%), Positives = 65/161 (40%), Gaps = 41/161 (25%)
Query: 74 AGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAG---SGGRGARSRGCHSPS 130
A R+P A + AGR A G + +RGRG P AG SGGR RG +P
Sbjct: 425 ARRRNPGAAARAKLAGQRAGRARARTGSQVGSRGRGWGPGAGRVPSGGR----RGVGNP- 479
Query: 131 CCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQ 190
RW G A PR S LL P LPA AR T R +
Sbjct: 480 ---------ERW---GGEAAAPRPSRVLL--------PELPAV--DPARDT------RRE 511
Query: 191 PQLCSAGTAARGR--RTRASPPTP---PRPRPPGLRSGDVP 226
P + T GR + +PP+ PRPRP L G+ P
Sbjct: 512 PDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDSLSPGEPP 552
Score = 30.0 bits (66), Expect = 2.6
Identities = 57/220 (25%), Positives = 69/220 (31%), Gaps = 45/220 (20%)
Query: 72 LRAGSRSPRGAGPGAAGPRAAGR-----GGAGGGGRCCT----RGRGRFPCAGSGGRGAR 122
LR ++PR A PR GG G G R R FP + + G G
Sbjct: 298 LRLAGQAPRTQPACPAAPRMQQTEREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVS 357
Query: 123 SRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATA 182
+ R + R R EA R A A R A +G R
Sbjct: 358 PQAGARVGEAREAVTTHERAHLDREGEARARLGQAA----AQMRREGWGARAKLGGRGVC 413
Query: 183 GLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAG 242
G C G R R +P R + G R+G R AR G RG G
Sbjct: 414 GK---------CGPGPWDDPARRR-NPGAAARAKLAGQRAG---RARARTGSQVGSRGRG 460
Query: 243 GRGGAQRIP-------------------PRPLRRLVPIHP 263
GA R+P PRP R L+P P
Sbjct: 461 WGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELP 500
>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
Length = 224
Score = 45.1 bits (105), Expect = 8e-05
Identities = 59/188 (31%), Positives = 71/188 (37%), Gaps = 52/188 (27%)
Query: 68 GSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARSRGCH 127
G A L+A P G G GP+ A RGG GRG GG GAR
Sbjct: 36 GGARLQATRTWPAGILEG--GPQVAARGG----------GRGW----EGGGLGAR----R 75
Query: 128 SPSCCRSSSCAWHRWPQLRGRE-AEPRASPALLICIAPRPRPALPAALHIGARATAGLAA 186
+ + R W R + R A PR S A P PA+ + G RA +
Sbjct: 76 AVTAARRGE--WGRARESRSAALASPRVSNA----------PTTPASRNPGLRAQERQSG 123
Query: 187 KRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGG 246
+RA A G RA PP P RP G G+ R A GAG R
Sbjct: 124 RRA----------AGGGGARAEPPRVPPCRPAGCSGGNRSRRAA---------GAGPRTT 164
Query: 247 AQRIPPRP 254
++ PPRP
Sbjct: 165 RRKPPPRP 172
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,467,454
Number of Sequences: 37866
Number of extensions: 1154293
Number of successful extensions: 18571
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 1172
Number of HSP's that attempted gapping in prelim test: 11020
Number of HSP's gapped (non-prelim): 6022
length of query: 304
length of database: 18,247,518
effective HSP length: 102
effective length of query: 202
effective length of database: 14,385,186
effective search space: 2905807572
effective search space used: 2905807572
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.