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Search of human proteins with 239745424
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745424 PREDICTED: hypothetical protein XP_002343463 [Homo
sapiens]
(154 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745424 PREDICTED: hypothetical protein XP_002343463 [Homo ... 338 8e-94
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 39 0.001
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 38 0.004
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 38 0.004
gi|50345881 cytoplasmic polyadenylation element binding protein ... 37 0.005
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ... 37 0.007
gi|239754911 PREDICTED: hypothetical protein [Homo sapiens] 36 0.011
gi|239749451 PREDICTED: hypothetical protein [Homo sapiens] 36 0.011
gi|239743581 PREDICTED: hypothetical protein [Homo sapiens] 36 0.011
gi|118498339 EMI domain containing 2 [Homo sapiens] 36 0.011
gi|239757467 PREDICTED: hypothetical protein [Homo sapiens] 35 0.019
gi|239751993 PREDICTED: hypothetical protein [Homo sapiens] 35 0.019
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens] 35 0.019
gi|239745104 PREDICTED: hypothetical protein XP_002343360 [Homo ... 35 0.019
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.025
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 34 0.043
gi|47132519 Ras association and pleckstrin homology domains 1 is... 34 0.043
gi|15718767 TRAAK [Homo sapiens] 34 0.043
gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo ... 34 0.057
gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo ... 34 0.057
gi|239508959 PREDICTED: hypothetical protein [Homo sapiens] 34 0.057
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 33 0.074
gi|239757729 PREDICTED: hypothetical protein [Homo sapiens] 33 0.074
gi|239752222 PREDICTED: hypothetical protein [Homo sapiens] 33 0.074
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 33 0.074
gi|169164936 PREDICTED: family with sequence similarity 132, mem... 33 0.074
gi|239746743 PREDICTED: hypothetical protein [Homo sapiens] 33 0.074
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 33 0.074
>gi|239745424 PREDICTED: hypothetical protein XP_002343463 [Homo
sapiens]
Length = 154
Score = 338 bits (868), Expect = 8e-94
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MVPRPRLHSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAGSAWTHA 60
MVPRPRLHSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAGSAWTHA
Sbjct: 1 MVPRPRLHSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAGSAWTHA 60
Query: 61 PCCAESPTAPYHTALAPRKRQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPHCSSAT 120
PCCAESPTAPYHTALAPRKRQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPHCSSAT
Sbjct: 61 PCCAESPTAPYHTALAPRKRQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPHCSSAT 120
Query: 121 SRRRKRNRAAPYSRPAPPSPPGPRWPPSPPKASH 154
SRRRKRNRAAPYSRPAPPSPPGPRWPPSPPKASH
Sbjct: 121 SRRRKRNRAAPYSRPAPPSPPGPRWPPSPPKASH 154
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 39.3 bits (90), Expect = 0.001
Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 32/169 (18%)
Query: 8 HSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAGSAW--------TH 59
+S S P+P + TSR PG +P P R W
Sbjct: 379 NSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH-----RGPAGNWGPPGDYPDRG 433
Query: 60 APCCAESPTAPYHTALAPRKRQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPHCSS- 118
P C P AP A R+R+ + + +++L V++ R R E +M ++ C+
Sbjct: 434 GPPC--KPPAPEDEDEAWRQRRKQSSSEISL--AVERARRRREEEERRMQEERRAACAEK 489
Query: 119 ---------ATSRRRKRNRAAPYSRPAPPSPPG--PR---WPPSPPKAS 153
A +R K AAP + P+ P+PP P+ PP+PP AS
Sbjct: 490 LKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPAS 538
Score = 29.6 bits (65), Expect = 1.1
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 114 PHCSSATSRRRKRNRAAPYSRPAPPS--PPGPRWPPSPPKAS 153
P + R KR+ +P +R PP PPG PP PP +S
Sbjct: 1419 PGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPPSSS 1460
Score = 27.7 bits (60), Expect = 4.1
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 6/24 (25%)
Query: 135 PAPPSP------PGPRWPPSPPKA 152
P+PP P P P+ PP PPKA
Sbjct: 679 PSPPQPVTLGAVPAPQAPPPPPKA 702
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.7 bits (86), Expect = 0.004
Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Query: 17 PSPPCSGTSRRERG-WPGRRDRQPRWTPGQQRLCRRSAGSAWTHAPCCAESPTAPYHTAL 75
PSPP SGT R + G W R P TP QRL R W H+P PT P +
Sbjct: 112 PSPPVSGTRRGKTGQWKEGRGSHP--TPEPQRLAAR----RWLHSP---REPTPPGRLSA 162
Query: 76 APR 78
PR
Sbjct: 163 PPR 165
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.7 bits (86), Expect = 0.004
Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Query: 17 PSPPCSGTSRRERG-WPGRRDRQPRWTPGQQRLCRRSAGSAWTHAPCCAESPTAPYHTAL 75
PSPP SGT R + G W R P TP QRL R W H+P PT P +
Sbjct: 112 PSPPVSGTRRGKTGQWKEGRGSHP--TPEPQRLAAR----RWLHSP---REPTPPGRLSA 162
Query: 76 APR 78
PR
Sbjct: 163 PPR 165
>gi|50345881 cytoplasmic polyadenylation element binding protein 3
[Homo sapiens]
Length = 698
Score = 37.4 bits (85), Expect = 0.005
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 8 HSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAGSAWTHAPCCAESP 67
H Q P P+P+P + ++ + P ++ R P +P Q +RSA +A+ H P P
Sbjct: 162 HHQQPPPPAPAPQPAQPAQPPQAQPPQQRRSPA-SPSQAPYAQRSAAAAYGHQPIMTSKP 220
Query: 68 TAPYHTALA 76
++ A A
Sbjct: 221 SSSSAVAAA 229
>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 37.0 bits (84), Expect = 0.007
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 35/159 (22%)
Query: 3 PRPRLHSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRR----------- 51
P PR S +P CS + R R RR R RW + R R
Sbjct: 20 PPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFSSGPSGPSG 79
Query: 52 -------SAGSAWTHAPCCAESPTAPYHTALAPRKRQMR---------RTQQVALWMRVK 95
S+G A + A SP P ++L R R+ R R++ ++L ++
Sbjct: 80 PSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRSRSLSLLRSLE 139
Query: 96 QLRGGRSHMESQMCLSKKPHCSSATSRRRKRNRAAPYSR 134
+LR S + ++ S++ R R+R+R+ SR
Sbjct: 140 RLRSSLSRLRERLRRSRE--------RERRRSRSLSRSR 170
Score = 28.5 bits (62), Expect = 2.4
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 101 RSHMESQMCLSKKPHCSSATSRRRKRN------RAAPYSRPAPPSPPGPRWPPSP 149
RS S S+ S + SRRR R+ R+ SRP P GP P SP
Sbjct: 29 RSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFSSGPSGPSGPSSP 83
Score = 26.9 bits (58), Expect = 6.9
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 133 SRPAPPSPPGP-RWPPSPPKAS 153
SR + P P P WPP PP+AS
Sbjct: 4 SRLSLPRPSSPLSWPPPPPRAS 25
>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 37.0 bits (84), Expect = 0.007
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 35/159 (22%)
Query: 3 PRPRLHSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRR----------- 51
P PR S +P CS + R R RR R RW + R R
Sbjct: 20 PPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFSSGPSGPSG 79
Query: 52 -------SAGSAWTHAPCCAESPTAPYHTALAPRKRQMR---------RTQQVALWMRVK 95
S+G A + A SP P ++L R R+ R R++ ++L ++
Sbjct: 80 PSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRSRSLSLLRSLE 139
Query: 96 QLRGGRSHMESQMCLSKKPHCSSATSRRRKRNRAAPYSR 134
+LR S + ++ S++ R R+R+R+ SR
Sbjct: 140 RLRSSLSRLRERLRRSRE--------RERRRSRSLSRSR 170
Score = 28.5 bits (62), Expect = 2.4
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 101 RSHMESQMCLSKKPHCSSATSRRRKRN------RAAPYSRPAPPSPPGPRWPPSP 149
RS S S+ S + SRRR R+ R+ SRP P GP P SP
Sbjct: 29 RSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFSSGPSGPSGPSSP 83
Score = 26.9 bits (58), Expect = 6.9
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 133 SRPAPPSPPGP-RWPPSPPKAS 153
SR + P P P WPP PP+AS
Sbjct: 4 SRLSLPRPSSPLSWPPPPPRAS 25
>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
sapiens]
Length = 231
Score = 37.0 bits (84), Expect = 0.007
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 35/159 (22%)
Query: 3 PRPRLHSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRR----------- 51
P PR S +P CS + R R RR R RW + R R
Sbjct: 20 PPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFSSGPSGPSG 79
Query: 52 -------SAGSAWTHAPCCAESPTAPYHTALAPRKRQMR---------RTQQVALWMRVK 95
S+G A + A SP P ++L R R+ R R++ ++L ++
Sbjct: 80 PSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRSRSLSLLRSLE 139
Query: 96 QLRGGRSHMESQMCLSKKPHCSSATSRRRKRNRAAPYSR 134
+LR S + ++ S++ R R+R+R+ SR
Sbjct: 140 RLRSSLSRLRERLRRSRE--------RERRRSRSLSRSR 170
Score = 28.5 bits (62), Expect = 2.4
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 101 RSHMESQMCLSKKPHCSSATSRRRKRN------RAAPYSRPAPPSPPGPRWPPSP 149
RS S S+ S + SRRR R+ R+ SRP P GP P SP
Sbjct: 29 RSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFSSGPSGPSGPSSP 83
Score = 26.9 bits (58), Expect = 6.9
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 133 SRPAPPSPPGP-RWPPSPPKAS 153
SR + P P P WPP PP+AS
Sbjct: 4 SRLSLPRPSSPLSWPPPPPRAS 25
>gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 36.2 bits (82), Expect = 0.011
Identities = 44/149 (29%), Positives = 57/149 (38%), Gaps = 23/149 (15%)
Query: 13 PVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSA---GSAWTHAPCCAESPTA 69
PVP P PP S +S+R P RR P +PG R+A GS + S +
Sbjct: 18 PVPEP-PPLSNSSQRAD--PARRPGAPWVSPGCSPESLRAAPLPGSLGARS----RSHSG 70
Query: 70 PYHTALAPRKR-----QMRRTQQVALWMRVKQLRGGRS-HMESQMCLSKKPH-------C 116
P TA A R + R+ A +R+ GG S H + L ++P C
Sbjct: 71 PPATAAAARASGHAHGRWPRSAATACTLRLSPWPGGASCHHRPRYHLRRRPQPHGAASSC 130
Query: 117 SSATSRRRKRNRAAPYSRPAPPSPPGPRW 145
S R A P R PP P W
Sbjct: 131 SLPRCRLCPERSAPPRRRGPPPLPTSCHW 159
>gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 36.2 bits (82), Expect = 0.011
Identities = 44/149 (29%), Positives = 57/149 (38%), Gaps = 23/149 (15%)
Query: 13 PVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSA---GSAWTHAPCCAESPTA 69
PVP P PP S +S+R P RR P +PG R+A GS + S +
Sbjct: 18 PVPEP-PPLSNSSQRAD--PARRPGAPWVSPGCSPESLRAAPLPGSLGARS----RSHSG 70
Query: 70 PYHTALAPRKR-----QMRRTQQVALWMRVKQLRGGRS-HMESQMCLSKKPH-------C 116
P TA A R + R+ A +R+ GG S H + L ++P C
Sbjct: 71 PPATAAAARASGHAHGRWPRSAATACTLRLSPWPGGASCHHRPRYHLRRRPQPHGAASSC 130
Query: 117 SSATSRRRKRNRAAPYSRPAPPSPPGPRW 145
S R A P R PP P W
Sbjct: 131 SLPRCRLCPERSAPPRRRGPPPLPTSCHW 159
>gi|239743581 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 36.2 bits (82), Expect = 0.011
Identities = 44/149 (29%), Positives = 57/149 (38%), Gaps = 23/149 (15%)
Query: 13 PVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSA---GSAWTHAPCCAESPTA 69
PVP P PP S +S+R P RR P +PG R+A GS + S +
Sbjct: 18 PVPEP-PPLSNSSQRAD--PARRPGAPWVSPGCSPESLRAAPLPGSLGARS----RSHSG 70
Query: 70 PYHTALAPRKR-----QMRRTQQVALWMRVKQLRGGRS-HMESQMCLSKKPH-------C 116
P TA A R + R+ A +R+ GG S H + L ++P C
Sbjct: 71 PPATAAAARASGHAHGRWPRSAATACTLRLSPWPGGASCHHRPRYHLRRRPQPHGAASSC 130
Query: 117 SSATSRRRKRNRAAPYSRPAPPSPPGPRW 145
S R A P R PP P W
Sbjct: 131 SLPRCRLCPERSAPPRRRGPPPLPTSCHW 159
>gi|118498339 EMI domain containing 2 [Homo sapiens]
Length = 439
Score = 36.2 bits (82), Expect = 0.011
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 131 PYSRPAPPSPPGPRWPPSPP 150
P P PP PPGPR PP PP
Sbjct: 304 PRGPPGPPGPPGPRGPPGPP 323
Score = 28.5 bits (62), Expect = 2.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 134 RPAPPSPPGPRWPPSP 149
RP PP PPGP P P
Sbjct: 249 RPGPPGPPGPAGNPGP 264
Score = 26.6 bits (57), Expect = 9.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Query: 131 PYSRPAPPSPPGPRWPPSPP 150
P P PP P GP PP P
Sbjct: 307 PPGPPGPPGPRGPPGPPGTP 326
>gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 35.4 bits (80), Expect = 0.019
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 112 KKPHCSSATSRRRKRNRAAPYSRPAPPSPPGPRWPPSPPK 151
+KP S + S RR+R R +P RP+P P P PSP +
Sbjct: 113 RKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPAR 152
>gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 35.4 bits (80), Expect = 0.019
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 112 KKPHCSSATSRRRKRNRAAPYSRPAPPSPPGPRWPPSPPK 151
+KP S + S RR+R R +P RP+P P P PSP +
Sbjct: 113 RKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPAR 152
>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 35.4 bits (80), Expect = 0.019
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 112 KKPHCSSATSRRRKRNRAAPYSRPAPPSPPGPRWPPSPPK 151
+KP S + S RR+R R +P RP+P P P PSP +
Sbjct: 113 RKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPAR 152
>gi|239745104 PREDICTED: hypothetical protein XP_002343360 [Homo
sapiens]
Length = 152
Score = 35.4 bits (80), Expect = 0.019
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 13 PVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAGSAWTHAPCCAESPTAPYH 72
P S P SG S+ G P G R+C+ ++G+ PC +P P+
Sbjct: 83 PATSGGPATSGRSKEPWGHISGCGDPPGAFRGSGRICQGTSGAR----PCFCRAPGYPWM 138
Query: 73 TALAPRKRQMRRT 85
AL PR+R R +
Sbjct: 139 AALCPRRRPGRHS 151
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 35.0 bits (79), Expect = 0.025
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Query: 22 SGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAGSAWTHAPCCAESPTAPYHTALAPRKRQ 81
S +RR RG G R P + RR G + T S + T+ AP KR
Sbjct: 1808 SRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRS---RTSPAPWKRS 1864
Query: 82 MRRTQQVA---LWMRVKQLRGGRSHMESQMCLSKKPHCSSATSRRRKRNRAAPYSR 134
R R + RS + ++ ++ +RRR R+RA+P SR
Sbjct: 1865 RSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSR 1920
Score = 31.2 bits (69), Expect = 0.37
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 11/145 (7%)
Query: 3 PRPRLHSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRS-AGSAWTHAP 61
PRPR S SP + C T +RER G + T + L +RS +GS+
Sbjct: 1493 PRPRSRSPSSP--ELNNKCL-TPQRERS--GSESSVDQKTVARTPLGQRSRSGSSQELDV 1547
Query: 62 CCAESPTAPYHTALAPRKRQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPHCSSATS 121
+ SP + +P + RT +R + G ++S+ LS + S ++
Sbjct: 1548 KPSASPQERSESDSSPDSKAKTRTP-----LRQRSRSGSSPEVDSKSRLSPRRSRSGSSP 1602
Query: 122 RRRKRNRAAPYSRPAPPSPPGPRWP 146
+ + RAAP ++ S P P+ P
Sbjct: 1603 EVKDKPRAAPRAQSGSDSSPEPKAP 1627
Score = 30.8 bits (68), Expect = 0.48
Identities = 42/167 (25%), Positives = 60/167 (35%), Gaps = 22/167 (13%)
Query: 3 PRPRLHSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAG-----SAW 57
P + HS SP P SGT R+ + + TP Q+R C S+ S
Sbjct: 830 PSRQSHSSSSPHPKVK---SGTPPRQGSITSPQANEQSVTP-QRRSCFESSPDPELKSRT 885
Query: 58 THAPCCAESPTAPYHTALAPRKRQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPHCS 117
C+ S ++ PR+ R + +VK + R S +
Sbjct: 886 PSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQP---KVKAIISPRQRSHSGSSSPSPSRVT 942
Query: 118 SATSRRRKRN---------RAAP-YSRPAPPSPPGPRWPPSPPKASH 154
S T+ RR R+ R P YS SP P +PP+ SH
Sbjct: 943 SRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSH 989
Score = 30.8 bits (68), Expect = 0.48
Identities = 45/159 (28%), Positives = 61/159 (38%), Gaps = 20/159 (12%)
Query: 5 PRLHSQYSPVPSPSPP-CSGTSRRERG-------WPGRRDRQPRWTP-GQQRLCRRSAGS 55
P H + V SP P S +SRR R RR R P P G QR RS
Sbjct: 1721 PPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRRE 1780
Query: 56 AWTHAPCCAESPTAPYHTALAPRKRQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPH 115
++ T + RR Q+ RV + R G S S+ +++
Sbjct: 1781 ---------KTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSP-ARQES 1830
Query: 116 CSSATSRRRKRNRAAPYSRPAPPSPPGPR-WPPSPPKAS 153
+++ RRR R+R P SR S P W S +AS
Sbjct: 1831 SRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRAS 1869
Score = 30.8 bits (68), Expect = 0.48
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 11 YSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAGSAWTHAPCCAESPT-- 68
+S P+ +SRR RG R R P ++R R++ + W + A T
Sbjct: 1821 HSRSPARQESSRTSSRRRRG----RSRTP--PTSRKRSRSRTSPAPWKRSRSRASPATHR 1874
Query: 69 -APYHTALAPRKRQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPHCSSATSRRRKRN 127
+ T L R+R RT V+ RS + + + +S SRRR R+
Sbjct: 1875 RSRSRTPLISRRRSRSRTSPVSR---------RRSRSRTSVTRRRSRSRASPVSRRRSRS 1925
Query: 128 RAAPYSR 134
R P +R
Sbjct: 1926 RTPPVTR 1932
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 34.3 bits (77), Expect = 0.043
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 127 NRAAPYSRPAPPSPPGPRWPPSPPKAS 153
++A P + PAPPS P P P+PP AS
Sbjct: 1042 SKAKPPTAPAPPSAPAPSAQPTPPSAS 1068
Score = 28.1 bits (61), Expect = 3.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 124 RKRNRAAPYSRPAPPSPPGPRWPPSPP 150
RK AP + P PPGP PP PP
Sbjct: 446 RKPFLGAPAATPHLSLPPGPSSPPPPP 472
Score = 26.9 bits (58), Expect = 6.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 135 PAPPSPPGPRWPPSPP 150
P PP PP P PP PP
Sbjct: 247 PPPPLPPPPPPPPPPP 262
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 34.3 bits (77), Expect = 0.043
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 91 WMRVKQLR-GGRSHMESQMCLSKKPHCSSATSRRRKRNRAAPY--SRPAPPSPPGPRWPP 147
W R QL ++ MES +P+ S + PY S+P+PP PP P PP
Sbjct: 581 WKRGTQLEESSKARMESM----NRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPPP 636
Query: 148 SPP 150
PP
Sbjct: 637 PPP 639
Score = 29.3 bits (64), Expect = 1.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 130 APYSRPAPPSPPGPRWPPSPPK 151
A Y P+PP+PP P PP+ PK
Sbjct: 821 ASYIPPSPPTPPVPVPPPTLPK 842
Score = 27.3 bits (59), Expect = 5.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 131 PYSRPAPPSPPGPRWPPSPPKA 152
P PAPP PP P P+P K+
Sbjct: 932 PSPVPAPPPPPPPTASPTPDKS 953
Score = 26.9 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 128 RAAPYSRPAPPSPPGPRWPPSPPK 151
+ AP + P PP P P P +PPK
Sbjct: 757 QVAPPTPPPPPPIPAPLPPQAPPK 780
Score = 26.6 bits (57), Expect = 9.1
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 104 MESQMCLSKKPHCSSATSRRRKRNRAAPYSRPAPPSPPGPRWPPSPPKAS 153
MESQ KP ++ + +A P +P+ P P +PP PP++S
Sbjct: 878 MESQPL---KPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESS 924
>gi|15718767 TRAAK [Homo sapiens]
Length = 393
Score = 34.3 bits (77), Expect = 0.043
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 129 AAPYSRPAPPSPPGPRWPPSPPKAS 153
A P RP PSPP PPSPP AS
Sbjct: 311 AQPLGRPRSPSPPEKAQPPSPPTAS 335
>gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo
sapiens]
Length = 528
Score = 33.9 bits (76), Expect = 0.057
Identities = 43/157 (27%), Positives = 56/157 (35%), Gaps = 29/157 (18%)
Query: 6 RLHSQYSPVPSPSP-PCSGTSRRERGWPGRR------DRQPRWTPGQQRLCRRSAGSAWT 58
RL S +P P+ P PC R G G R D + TPG+ R G++W+
Sbjct: 253 RLRSSRAPPPARRPLPCESL-RTPSGTAGPRSPASGPDARGAPTPGRAR----GGGASWS 307
Query: 59 HAPCCAESPTAPYHTALA-PRKRQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPHCS 117
P P P L PR + R + GRS S +P S
Sbjct: 308 ATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVV---------GRS--SSVTIDHSRPASS 356
Query: 118 SATSRRRKR-----NRAAPYSRPAPPSPPGPRWPPSP 149
RR R + PY+ P+P PR P P
Sbjct: 357 RGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP 393
>gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo
sapiens]
Length = 528
Score = 33.9 bits (76), Expect = 0.057
Identities = 43/157 (27%), Positives = 56/157 (35%), Gaps = 29/157 (18%)
Query: 6 RLHSQYSPVPSPSP-PCSGTSRRERGWPGRR------DRQPRWTPGQQRLCRRSAGSAWT 58
RL S +P P+ P PC R G G R D + TPG+ R G++W+
Sbjct: 253 RLRSSRAPPPARRPLPCESL-RTPSGTAGPRSPASGPDARGAPTPGRAR----GGGASWS 307
Query: 59 HAPCCAESPTAPYHTALA-PRKRQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPHCS 117
P P P L PR + R + GRS S +P S
Sbjct: 308 ATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVV---------GRS--SSVTIDHSRPASS 356
Query: 118 SATSRRRKR-----NRAAPYSRPAPPSPPGPRWPPSP 149
RR R + PY+ P+P PR P P
Sbjct: 357 RGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP 393
>gi|239508959 PREDICTED: hypothetical protein [Homo sapiens]
Length = 528
Score = 33.9 bits (76), Expect = 0.057
Identities = 43/157 (27%), Positives = 56/157 (35%), Gaps = 29/157 (18%)
Query: 6 RLHSQYSPVPSPSP-PCSGTSRRERGWPGRR------DRQPRWTPGQQRLCRRSAGSAWT 58
RL S +P P+ P PC R G G R D + TPG+ R G++W+
Sbjct: 253 RLRSSRAPPPARRPLPCESL-RTPSGTAGPRSPASGPDARGAPTPGRAR----GGGASWS 307
Query: 59 HAPCCAESPTAPYHTALA-PRKRQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPHCS 117
P P P L PR + R + GRS S +P S
Sbjct: 308 ATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVV---------GRS--SSVTIDHSRPASS 356
Query: 118 SATSRRRKR-----NRAAPYSRPAPPSPPGPRWPPSP 149
RR R + PY+ P+P PR P P
Sbjct: 357 RGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP 393
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 33.5 bits (75), Expect = 0.074
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 123 RRKRNRAAPYSRPA--PPSPPGPRWPPSPP 150
RR N P + PA PP PPGP PP PP
Sbjct: 154 RRVSNAGGPPAPPAGGPPPPPGPPPPPGPP 183
Score = 28.1 bits (61), Expect = 3.1
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 9/56 (16%)
Query: 95 KQLRGGRSHMESQMCLSKKPHCSSATSRRRKRNRAAPYSRPAPPSPPGPRWPPSPP 150
+Q G H+E ++ + P A P P PP PPGP PP P
Sbjct: 143 RQQPGPSEHIERRVSNAGGPPAPPA---------GGPPPPPGPPPPPGPPPPPGLP 189
>gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 33.5 bits (75), Expect = 0.074
Identities = 43/157 (27%), Positives = 58/157 (36%), Gaps = 8/157 (5%)
Query: 2 VPRPRLHSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAGSAWTHAP 61
+P R+ + Y P + +R+ G RDR P W + G+ +
Sbjct: 1 MPTERILNLYGKNYKPQDQSPPSPQRDSGLTPERDR-PDWPRSFKPPLSPEKGTKASGPQ 59
Query: 62 CCAESPTAP-YHTA-LAPRK-RQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPH--- 115
A SP P HT +PR+ R+ R TQ+V G +PH
Sbjct: 60 TSAPSPRDPGLHTPPCSPRRGRRGRPTQEVCPAPGPCAQPAGTCPPPPTGEKQPRPHGFR 119
Query: 116 CSSATSRRRKRNRAAPYSRPAPPSPPGPRWPPSPPKA 152
CS S+R AP RP P PRWP P A
Sbjct: 120 CSHG-SKRAPALLGAPARRPPAHIPAQPRWPRLQPVA 155
Score = 28.1 bits (61), Expect = 3.1
Identities = 43/158 (27%), Positives = 59/158 (37%), Gaps = 38/158 (24%)
Query: 21 CSGTSRRER---GWPGRRD-----RQPRWTPGQQRLCRRSAGSAWTHAPCCAESPTAPYH 72
CS S+R G P RR QPRW P Q + +R A P P AP
Sbjct: 120 CSHGSKRAPALLGAPARRPPAHIPAQPRW-PRLQPVAKRRA------RPVPPGLPGAPKQ 172
Query: 73 TALAPRKRQM---------RRTQQVALWMRVKQLRG-----GRSHMESQMC-------LS 111
AL P +R + R QQV + Q RG G + S +C
Sbjct: 173 AALTPGRRPLTPAAFAPKASRDQQVTDSTTICQ-RGLIEETGPARQISDLCEVSQGVGAF 231
Query: 112 KKPHCSSATSRRRKRNRAAPYSRPAPPSPPGPRWPPSP 149
+ C S+ + R++ +P+ P+P S W P
Sbjct: 232 RAGGCPSSLASSREQTH-SPHLYPSPSSSSPSSWEAPP 268
>gi|239752222 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 33.5 bits (75), Expect = 0.074
Identities = 43/157 (27%), Positives = 58/157 (36%), Gaps = 8/157 (5%)
Query: 2 VPRPRLHSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAGSAWTHAP 61
+P R+ + Y P + +R+ G RDR P W + G+ +
Sbjct: 1 MPTERILNLYGKNYKPQDQSPPSPQRDSGLTPERDR-PDWPRSFKPPLSPEKGTKASGPQ 59
Query: 62 CCAESPTAP-YHTA-LAPRK-RQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPH--- 115
A SP P HT +PR+ R+ R TQ+V G +PH
Sbjct: 60 TSAPSPRDPGLHTPPCSPRRGRRGRPTQEVCPAPGPCAQPAGTCPPPPTGEKQPRPHGFR 119
Query: 116 CSSATSRRRKRNRAAPYSRPAPPSPPGPRWPPSPPKA 152
CS S+R AP RP P PRWP P A
Sbjct: 120 CSHG-SKRAPALLGAPARRPPAHIPAQPRWPRLQPVA 155
Score = 28.1 bits (61), Expect = 3.1
Identities = 43/158 (27%), Positives = 59/158 (37%), Gaps = 38/158 (24%)
Query: 21 CSGTSRRER---GWPGRRD-----RQPRWTPGQQRLCRRSAGSAWTHAPCCAESPTAPYH 72
CS S+R G P RR QPRW P Q + +R A P P AP
Sbjct: 120 CSHGSKRAPALLGAPARRPPAHIPAQPRW-PRLQPVAKRRA------RPVPPGLPGAPKQ 172
Query: 73 TALAPRKRQM---------RRTQQVALWMRVKQLRG-----GRSHMESQMC-------LS 111
AL P +R + R QQV + Q RG G + S +C
Sbjct: 173 AALTPGRRPLTPAAFAPKASRDQQVTDSTTICQ-RGLIEETGPARQISDLCEVSQGVGAF 231
Query: 112 KKPHCSSATSRRRKRNRAAPYSRPAPPSPPGPRWPPSP 149
+ C S+ + R++ +P+ P+P S W P
Sbjct: 232 RAGGCPSSLASSREQTH-SPHLYPSPSSSSPSSWEAPP 268
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 33.5 bits (75), Expect = 0.074
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 11/104 (10%)
Query: 51 RSAGSAWTHAPCCAESPTAPYHTALAPRKRQMRRTQQVALWMRVKQLR----------GG 100
R A S H+P C S + +H R R+ AL + + G
Sbjct: 119 RGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGA 178
Query: 101 RSHMESQMCLSKKPHCSSATSRRRKRNRAAPYSRPAPPSPPGPR 144
R+ ++ CS+ T+ R +R RA+P P P PPG R
Sbjct: 179 RATAGLAAKRAQPQLCSAGTAARGRRTRASP-PTPPRPRPPGLR 221
>gi|169164936 PREDICTED: family with sequence similarity 132, member
B [Homo sapiens]
Length = 367
Score = 33.5 bits (75), Expect = 0.074
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 122 RRRKRNRAAPYSRPAPPSPPGPRWPPSP 149
R R + + + P PP PPGP+ PP P
Sbjct: 111 RSRGKAKKLKFGLPGPPGPPGPQGPPGP 138
Score = 26.6 bits (57), Expect = 9.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 135 PAPPSPPGPRWPPSPPKA 152
P PP P GP P PP+A
Sbjct: 127 PGPPGPQGPPGPIIPPEA 144
>gi|239746743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 33.5 bits (75), Expect = 0.074
Identities = 43/157 (27%), Positives = 58/157 (36%), Gaps = 8/157 (5%)
Query: 2 VPRPRLHSQYSPVPSPSPPCSGTSRRERGWPGRRDRQPRWTPGQQRLCRRSAGSAWTHAP 61
+P R+ + Y P + +R+ G RDR P W + G+ +
Sbjct: 1 MPTERILNLYGKNYKPQDQSPPSPQRDSGLTPERDR-PDWPRSFKPPLSPEKGTKASGPQ 59
Query: 62 CCAESPTAP-YHTA-LAPRK-RQMRRTQQVALWMRVKQLRGGRSHMESQMCLSKKPH--- 115
A SP P HT +PR+ R+ R TQ+V G +PH
Sbjct: 60 TSAPSPRDPGLHTPPCSPRRGRRGRPTQEVCPAPGPCAQPAGTCPPPPTGEKQPRPHGFR 119
Query: 116 CSSATSRRRKRNRAAPYSRPAPPSPPGPRWPPSPPKA 152
CS S+R AP RP P PRWP P A
Sbjct: 120 CSHG-SKRAPALLGAPARRPPAHIPAQPRWPRLQPVA 155
Score = 28.1 bits (61), Expect = 3.1
Identities = 43/158 (27%), Positives = 59/158 (37%), Gaps = 38/158 (24%)
Query: 21 CSGTSRRER---GWPGRRD-----RQPRWTPGQQRLCRRSAGSAWTHAPCCAESPTAPYH 72
CS S+R G P RR QPRW P Q + +R A P P AP
Sbjct: 120 CSHGSKRAPALLGAPARRPPAHIPAQPRW-PRLQPVAKRRA------RPVPPGLPGAPKQ 172
Query: 73 TALAPRKRQM---------RRTQQVALWMRVKQLRG-----GRSHMESQMC-------LS 111
AL P +R + R QQV + Q RG G + S +C
Sbjct: 173 AALTPGRRPLTPAAFAPKASRDQQVTDSTTICQ-RGLIEETGPARQISDLCEVSQGVGAF 231
Query: 112 KKPHCSSATSRRRKRNRAAPYSRPAPPSPPGPRWPPSP 149
+ C S+ + R++ +P+ P+P S W P
Sbjct: 232 RAGGCPSSLASSREQTH-SPHLYPSPSSSSPSSWEAPP 268
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 33.5 bits (75), Expect = 0.074
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 11/104 (10%)
Query: 51 RSAGSAWTHAPCCAESPTAPYHTALAPRKRQMRRTQQVALWMRVKQLR----------GG 100
R A S H+P C S + +H R R+ AL + + G
Sbjct: 119 RGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGA 178
Query: 101 RSHMESQMCLSKKPHCSSATSRRRKRNRAAPYSRPAPPSPPGPR 144
R+ ++ CS+ T+ R +R RA+P P P PPG R
Sbjct: 179 RATAGLAAKRAQPQLCSAGTAARGRRTRASP-PTPPRPRPPGLR 221
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.129 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,885,872
Number of Sequences: 37866
Number of extensions: 505999
Number of successful extensions: 10870
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 294
Number of HSP's that attempted gapping in prelim test: 6901
Number of HSP's gapped (non-prelim): 3673
length of query: 154
length of database: 18,247,518
effective HSP length: 93
effective length of query: 61
effective length of database: 14,725,980
effective search space: 898284780
effective search space used: 898284780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.