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Search of human proteins with 239745420
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745420 PREDICTED: hypothetical protein XP_002343461 [Homo
sapiens]
(144 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745437 PREDICTED: hypothetical protein XP_002343466 [Homo ... 297 2e-81
gi|239745420 PREDICTED: hypothetical protein XP_002343461 [Homo ... 297 2e-81
gi|239756491 PREDICTED: hypothetical protein [Homo sapiens] 295 9e-81
gi|239745428 PREDICTED: hypothetical protein XP_002343462 [Homo ... 295 9e-81
gi|239745440 PREDICTED: hypothetical protein XP_002343467 [Homo ... 293 3e-80
gi|239756435 PREDICTED: hypothetical protein [Homo sapiens] 282 6e-77
gi|239750968 PREDICTED: hypothetical protein XP_002347619 [Homo ... 282 6e-77
gi|239745374 PREDICTED: hypothetical protein XP_002343449 [Homo ... 282 6e-77
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 33 0.083
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 32 0.18
gi|83367077 mucin 16 [Homo sapiens] 31 0.41
gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens] 30 0.70
gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens] 30 0.70
gi|55743092 aristaless-like homeobox 4 [Homo sapiens] 30 0.91
gi|222418633 family with sequence similarity 71, member B [Homo ... 29 1.2
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 29 1.2
gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens] 28 2.0
gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens] 28 2.0
gi|148539844 deleted in malignant brain tumors 1 isoform c precu... 28 2.0
gi|148539842 deleted in malignant brain tumors 1 isoform b precu... 28 2.0
gi|148539840 deleted in malignant brain tumors 1 isoform a precu... 28 2.0
gi|4503357 docking protein 1 [Homo sapiens] 28 2.7
gi|116284382 G protein-coupled bile acid receptor 1 [Homo sapiens] 28 2.7
gi|116284384 G protein-coupled bile acid receptor 1 [Homo sapiens] 28 2.7
gi|24850109 G protein-coupled bile acid receptor 1 [Homo sapiens] 28 2.7
gi|161019170 mucin 5AC [Homo sapiens] 28 3.5
gi|239755513 PREDICTED: hypothetical protein [Homo sapiens] 28 3.5
gi|239750015 PREDICTED: hypothetical protein XP_002347237 [Homo ... 28 3.5
gi|239744328 PREDICTED: hypothetical protein XP_002343098 [Homo ... 28 3.5
gi|88758613 CD93 antigen precursor [Homo sapiens] 28 3.5
>gi|239745437 PREDICTED: hypothetical protein XP_002343466 [Homo
sapiens]
Length = 144
Score = 297 bits (760), Expect = 2e-81
Identities = 144/144 (100%), Positives = 144/144 (100%)
Query: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP
Sbjct: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
Query: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
>gi|239745420 PREDICTED: hypothetical protein XP_002343461 [Homo
sapiens]
Length = 144
Score = 297 bits (760), Expect = 2e-81
Identities = 144/144 (100%), Positives = 144/144 (100%)
Query: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP
Sbjct: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
Query: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
>gi|239756491 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 295 bits (755), Expect = 9e-81
Identities = 143/144 (99%), Positives = 143/144 (99%)
Query: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSF TVTRASEYSMTCWGSACRSSP
Sbjct: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFRTVTRASEYSMTCWGSACRSSP 60
Query: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
>gi|239745428 PREDICTED: hypothetical protein XP_002343462 [Homo
sapiens]
Length = 144
Score = 295 bits (755), Expect = 9e-81
Identities = 143/144 (99%), Positives = 143/144 (99%)
Query: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSF TVTRASEYSMTCWGSACRSSP
Sbjct: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFRTVTRASEYSMTCWGSACRSSP 60
Query: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
>gi|239745440 PREDICTED: hypothetical protein XP_002343467 [Homo
sapiens]
Length = 144
Score = 293 bits (751), Expect = 3e-80
Identities = 143/144 (99%), Positives = 143/144 (99%)
Query: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP
Sbjct: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
Query: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
GSTLAVS CSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61 GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
>gi|239756435 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 282 bits (722), Expect = 6e-77
Identities = 138/144 (95%), Positives = 141/144 (97%)
Query: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP
Sbjct: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60
Query: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
GSTLAVSPCSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
>gi|239750968 PREDICTED: hypothetical protein XP_002347619 [Homo
sapiens]
Length = 144
Score = 282 bits (722), Expect = 6e-77
Identities = 138/144 (95%), Positives = 141/144 (97%)
Query: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP
Sbjct: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60
Query: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
GSTLAVSPCSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
>gi|239745374 PREDICTED: hypothetical protein XP_002343449 [Homo
sapiens]
Length = 144
Score = 282 bits (722), Expect = 6e-77
Identities = 138/144 (95%), Positives = 141/144 (97%)
Query: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP
Sbjct: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60
Query: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
GSTLAVSPCSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 33.1 bits (74), Expect = 0.083
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 30 QNRAALTSFSTVTRASEYSMTCWGSACRSSPGSTLAVSPCSQTVSPIALPL-----GSGR 84
Q ++LTS T + + M A +SP SP + T PIA + G
Sbjct: 2231 QQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSTAPPIATGVSSSASGPST 2290
Query: 85 VMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTSKCGLKP 138
+ + S P+ L+ TT++ S TTT+ P + C +KP
Sbjct: 2291 ANYNSFSSASMPQIPVASVTPTASLSGAGTYTTSSLSTKSTTTSDPPNICKVKP 2344
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 32.0 bits (71), Expect = 0.18
Identities = 31/69 (44%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 37 SFSTVTRASEYSMTCWGSACRSSPGSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGG 96
S S + +S S T S+ SSPGS+LA SP + VS A PLG G A G G
Sbjct: 123 SGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTA-PLGPG--------AAGPG 173
Query: 97 EQV-AVSGA 104
V AVSGA
Sbjct: 174 TGVPAVSGA 182
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 30.8 bits (68), Expect = 0.41
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 88 RDLRAEGGGEQVAVSGAPSHGLAHLLRATTA----APSWSCTTTARPTSK 133
R+LR G S +HG + +LRATT+ A SW+ +TA+ S+
Sbjct: 481 RELRTTGSTSGRQSSSTAAHGSSDILRATTSSTSKASSWTSESTAQQFSE 530
>gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens]
Length = 296
Score = 30.0 bits (66), Expect = 0.70
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 29 GQNRAALTSFSTVTRASEYSMTCWGSACRSSPGSTLAVSPCSQTVSPIALPLGSGRVMAR 88
G + ++ S + RA E + G+ G T S T+SP P G G
Sbjct: 26 GASSSSHCSGESQCRAGELGLGGAGTRLNGLGGLTGGGSGSGCTLSP---PQGCG----- 77
Query: 89 DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTS 132
GGG +A+S PS G+ LL AA S S ++++ +S
Sbjct: 78 -----GGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASS 116
>gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens]
Length = 333
Score = 30.0 bits (66), Expect = 0.70
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 29 GQNRAALTSFSTVTRASEYSMTCWGSACRSSPGSTLAVSPCSQTVSPIALPLGSGRVMAR 88
G + ++ S + RA E + G+ G T S T+SP P G G
Sbjct: 26 GASSSSHCSGESQCRAGELGLGGAGTRLNGLGGLTGGGSGSGCTLSP---PQGCG----- 77
Query: 89 DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTS 132
GGG +A+S PS G+ LL AA S S ++++ +S
Sbjct: 78 -----GGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASS 116
>gi|55743092 aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 29.6 bits (65), Expect = 0.91
Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 21/97 (21%)
Query: 29 GQNRAALTSFST------VTRASEYSMT---CW---GSACRSSPGSTLAVSPCSQTVSPI 76
GQ + T FST +TRA Y+ W A P + P +SP
Sbjct: 276 GQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPACMSPH 335
Query: 77 ALPLGSGRVMARDLRAEGGGEQVAVSGAPSH-GLAHL 112
A P GSG D ++VSGA SH G H+
Sbjct: 336 AHPPGSGASSVTDF--------LSVSGAGSHVGQTHM 364
>gi|222418633 family with sequence similarity 71, member B [Homo
sapiens]
Length = 605
Score = 29.3 bits (64), Expect = 1.2
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 29 GQNRAALTSFSTVTRASEYSMTCWGSACRSSPGSTLAVSPCSQTVSPIALPLGSGRVMAR 88
G+N++A ++ + +AS+ S + R++PGS V+ + V +A + + A+
Sbjct: 516 GKNQSASSTGALQKKASKISSFL--RSLRATPGSKTRVTSHDREVDIVAKMVEKQNIEAK 573
Query: 89 DLRAEGGGEQVAVSG 103
+A+GG E +SG
Sbjct: 574 VEKAQGGQELEMISG 588
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 29.3 bits (64), Expect = 1.2
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 64 LAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWS 123
+A P + V+P+ L L S + L + G + ++ P +HL +T
Sbjct: 910 IAAKPYEEQVNPVLLTL-SPQTGTLALSVQPSGGDIRMNQGPEESESHLCSDSTPKMEG- 967
Query: 124 CTTTARPTSKCGLKPGGSTAP 144
P CGLK G T P
Sbjct: 968 ------PQGACGLKLAGDTKP 982
>gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]
Length = 1662
Score = 28.5 bits (62), Expect = 2.0
Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)
Query: 52 WGSACRSSPGSTLAVSPCSQTVSPIALPL--------GSGRVMARDLRAEGGGEQV---A 100
WG+ C S + A C Q A+ GSG ++ D+R G +
Sbjct: 910 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 969
Query: 101 VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
G +H H + AT T W + TTTARP+S CG
Sbjct: 970 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1016
>gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]
Length = 1788
Score = 28.5 bits (62), Expect = 2.0
Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)
Query: 52 WGSACRSSPGSTLAVSPCSQTVSPIALPL--------GSGRVMARDLRAEGGGEQV---A 100
WG+ C S + A C Q A+ GSG ++ D+R G +
Sbjct: 1036 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1095
Query: 101 VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
G +H H + AT T W + TTTARP+S CG
Sbjct: 1096 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1142
>gi|148539844 deleted in malignant brain tumors 1 isoform c precursor
[Homo sapiens]
Length = 2403
Score = 28.5 bits (62), Expect = 2.0
Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)
Query: 52 WGSACRSSPGSTLAVSPCSQTVSPIALPL--------GSGRVMARDLRAEGGGEQV---A 100
WG+ C S + A C Q A+ GSG ++ D+R G +
Sbjct: 1651 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1710
Query: 101 VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
G +H H + AT T W + TTTARP+S CG
Sbjct: 1711 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1757
>gi|148539842 deleted in malignant brain tumors 1 isoform b precursor
[Homo sapiens]
Length = 2413
Score = 28.5 bits (62), Expect = 2.0
Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)
Query: 52 WGSACRSSPGSTLAVSPCSQTVSPIALPL--------GSGRVMARDLRAEGGGEQV---A 100
WG+ C S + A C Q A+ GSG ++ D+R G +
Sbjct: 1661 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1720
Query: 101 VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
G +H H + AT T W + TTTARP+S CG
Sbjct: 1721 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1767
>gi|148539840 deleted in malignant brain tumors 1 isoform a precursor
[Homo sapiens]
Length = 1785
Score = 28.5 bits (62), Expect = 2.0
Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)
Query: 52 WGSACRSSPGSTLAVSPCSQTVSPIALPL--------GSGRVMARDLRAEGGGEQV---A 100
WG+ C S + A C Q A+ GSG ++ D+R G +
Sbjct: 1033 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1092
Query: 101 VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
G +H H + AT T W + TTTARP+S CG
Sbjct: 1093 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1139
>gi|4503357 docking protein 1 [Homo sapiens]
Length = 481
Score = 28.1 bits (61), Expect = 2.7
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 9/77 (11%)
Query: 68 PCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLA--HLLRATTAAPSWSCT 125
P ++ P+ P G A G SG SH A ++ + A+ SW C
Sbjct: 412 PPPRSTKPLLAPKPQGPAFPEPGTATG-------SGIKSHNSALYSQVQKSGASGSWDCG 464
Query: 126 TTARPTSKCGLKPGGST 142
+ T K G+K GST
Sbjct: 465 LSRVGTDKTGVKSEGST 481
>gi|116284382 G protein-coupled bile acid receptor 1 [Homo sapiens]
Length = 330
Score = 28.1 bits (61), Expect = 2.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 52 WGSACRSSPGSTLAVSPCSQT 72
WG A R SPG ++A P SQ+
Sbjct: 303 WGRASRDSPGPSIAYHPSSQS 323
>gi|116284384 G protein-coupled bile acid receptor 1 [Homo sapiens]
Length = 330
Score = 28.1 bits (61), Expect = 2.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 52 WGSACRSSPGSTLAVSPCSQT 72
WG A R SPG ++A P SQ+
Sbjct: 303 WGRASRDSPGPSIAYHPSSQS 323
>gi|24850109 G protein-coupled bile acid receptor 1 [Homo sapiens]
Length = 330
Score = 28.1 bits (61), Expect = 2.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 52 WGSACRSSPGSTLAVSPCSQT 72
WG A R SPG ++A P SQ+
Sbjct: 303 WGRASRDSPGPSIAYHPSSQS 323
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 27.7 bits (60), Expect = 3.5
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 31 NRAALTSFSTVTRASEYSM-TCWGSACRSSPGSTLAVSPCSQTVSPIALPLGSGRVMARD 89
N A T +++ +S +++ T W SA + G+T P + T A G+ +
Sbjct: 4479 NTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPA 4538
Query: 90 LRAEGGGEQVAVSG------APSHGLAHLLRATTAAPSWSCTTTARPTS 132
L + + S P H A TA PS + T+T P+S
Sbjct: 4539 LSSPHPSSRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSS 4587
Score = 27.3 bits (59), Expect = 4.5
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 31 NRAALTSFSTVTRASEYSM-TCWGSACRSSPGSTLAVSPCSQTVSPIALPLGSGRVMARD 89
N A T ++ +S +++ T W SA G+T P + T +A G+ +
Sbjct: 2830 NTMATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTLAATTGTTQHSTPA 2889
Query: 90 LRAEGGGEQVAVSG------APSHGLAHLLRATTAAPSWSCTTTARPTS 132
L + + S P H A TA PS + T+T P+S
Sbjct: 2890 LSSPHPSSRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSS 2938
Score = 27.3 bits (59), Expect = 4.5
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 31 NRAALTSFSTVTRASEYSM-TCWGSACRSSPGSTLAVSPCSQTVSPIALPLGSGRVMARD 89
N A T +++ +S +++ T W SA + G+T P + T A G+ +
Sbjct: 3332 NTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPA 3391
Query: 90 LRAEGGGEQVAVSG------APSHGLAHLLRATTAAPSWSCTTTARPTS 132
L + + S P H A TA PS + T+T P+S
Sbjct: 3392 LSSPHPSSRTTESPPSPGTTTPGHTRATSRTTATATPSKTRTSTLLPSS 3440
>gi|239755513 PREDICTED: hypothetical protein [Homo sapiens]
Length = 146
Score = 27.7 bits (60), Expect = 3.5
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 53 GSACRSSPGSTLAVSPCSQTVSPIALPLGSGRVMA---RDLRAEGGGEQVAVSGAPS--H 107
GS C P A P+ L G+ ++ R + E G + PS H
Sbjct: 15 GSKCPFGPQKQKAGLERGSMQLPLLHHLVPGQALSPTSRRKKTERGNCEQMGFWVPSGLH 74
Query: 108 GLAHLLRATTAAPSWSCTTTARPTSKCGLKPGGSTAP 144
+ +L A T+AP+W ARP G KP +P
Sbjct: 75 KPSVMLPACTSAPAWPPDIPARPGLGAGDKPREGPSP 111
>gi|239750015 PREDICTED: hypothetical protein XP_002347237 [Homo
sapiens]
Length = 146
Score = 27.7 bits (60), Expect = 3.5
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 53 GSACRSSPGSTLAVSPCSQTVSPIALPLGSGRVMA---RDLRAEGGGEQVAVSGAPS--H 107
GS C P A P+ L G+ ++ R + E G + PS H
Sbjct: 15 GSKCPFGPQKQKAGLERGSMQLPLLHHLVPGQALSPTSRRKKTERGNCEQMGFWVPSGLH 74
Query: 108 GLAHLLRATTAAPSWSCTTTARPTSKCGLKPGGSTAP 144
+ +L A T+AP+W ARP G KP +P
Sbjct: 75 KPSVMLPACTSAPAWPPDIPARPGLGAGDKPREGPSP 111
>gi|239744328 PREDICTED: hypothetical protein XP_002343098 [Homo
sapiens]
Length = 146
Score = 27.7 bits (60), Expect = 3.5
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 53 GSACRSSPGSTLAVSPCSQTVSPIALPLGSGRVMA---RDLRAEGGGEQVAVSGAPS--H 107
GS C P A P+ L G+ ++ R + E G + PS H
Sbjct: 15 GSKCPFGPQKQKAGLERGSMQLPLLHHLVPGQALSPTSRRKKTERGNCEQMGFWVPSGLH 74
Query: 108 GLAHLLRATTAAPSWSCTTTARPTSKCGLKPGGSTAP 144
+ +L A T+AP+W ARP G KP +P
Sbjct: 75 KPSVMLPACTSAPAWPPDIPARPGLGAGDKPREGPSP 111
>gi|88758613 CD93 antigen precursor [Homo sapiens]
Length = 652
Score = 27.7 bits (60), Expect = 3.5
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 56 CRSSPGSTLAVSPCSQTVSPIALPLGSGRVMARDL-RAEGGGEQVAVSGAPSHGLAHLLR 114
C PG LA + S T+ P++L SG D EG A + +P+ G +
Sbjct: 452 CGCLPGWVLAPNGVSCTMGPVSLGPPSGPPDEEDKGEKEGSTVPRAATASPTRGPEGTPK 511
Query: 115 A--TTAAPSWSCTTTARPTSKCGLKPGGS 141
A TT+ PS S L P GS
Sbjct: 512 ATPTTSRPSLSSDAPITSAPLKMLAPSGS 540
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.126 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,269,167
Number of Sequences: 37866
Number of extensions: 267533
Number of successful extensions: 971
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 935
Number of HSP's gapped (non-prelim): 65
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.