Guide to the Human Genome
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Search of human proteins with 239744595

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239744595 PREDICTED: hypothetical protein XP_002343205 [Homo
sapiens]
         (221 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750286 PREDICTED: hypothetical protein XP_002347353 [Homo ...   456   e-129
gi|239744595 PREDICTED: hypothetical protein XP_002343205 [Homo ...   456   e-129
gi|239755784 PREDICTED: hypothetical protein [Homo sapiens]           453   e-128
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         45   5e-05
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ...    40   0.002
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ...    40   0.002
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            38   0.006
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            38   0.006
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ...    38   0.008
gi|239754508 PREDICTED: hypothetical protein [Homo sapiens]            37   0.010
gi|239508747 PREDICTED: hypothetical protein [Homo sapiens]            37   0.010
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]              37   0.017
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]            37   0.017
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]            37   0.017
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ...    37   0.017
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             37   0.017
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        37   0.017
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            35   0.051
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]            35   0.051
gi|239756892 PREDICTED: hypothetical protein [Homo sapiens]            35   0.066
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]            35   0.066
gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo ...    35   0.066
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]            35   0.066
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    35   0.066
gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo ...    35   0.066
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ...    35   0.066
gi|54873613 agrin [Homo sapiens]                                       34   0.086
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]            34   0.086
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ...    34   0.086
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ...    34   0.086

>gi|239750286 PREDICTED: hypothetical protein XP_002347353 [Homo
           sapiens]
          Length = 221

 Score =  456 bits (1173), Expect = e-129
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60
           MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV
Sbjct: 1   MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60

Query: 61  SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120
           SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS
Sbjct: 61  SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120

Query: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180
           AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA
Sbjct: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180

Query: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221
           AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC
Sbjct: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221


>gi|239744595 PREDICTED: hypothetical protein XP_002343205 [Homo
           sapiens]
          Length = 221

 Score =  456 bits (1173), Expect = e-129
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60
           MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV
Sbjct: 1   MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60

Query: 61  SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120
           SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS
Sbjct: 61  SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120

Query: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180
           AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA
Sbjct: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180

Query: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221
           AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC
Sbjct: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221


>gi|239755784 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 221

 Score =  453 bits (1165), Expect = e-128
 Identities = 220/221 (99%), Positives = 220/221 (99%)

Query: 1   MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60
           MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV
Sbjct: 1   MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60

Query: 61  SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120
           SP VALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS
Sbjct: 61  SPCVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120

Query: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180
           AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA
Sbjct: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180

Query: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221
           AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC
Sbjct: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 36/111 (32%), Positives = 44/111 (39%), Gaps = 3/111 (2%)

Query: 3   QSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSP 62
           Q  T  R R R  PS P    R     P+ A P  R  +  PP  RR       R   SP
Sbjct: 537 QKETSPRGRRRRSPSPPPTRRRRS---PSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSP 593

Query: 63  RVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
           R    P+QR    + P   +TA+   PP+   S    P+ R S  P P  R
Sbjct: 594 RRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQR 644



 Score = 33.9 bits (76), Expect = 0.11
 Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 17/117 (14%)

Query: 4   SATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPR 63
           S   +RR   + P   R +   K   P+ +S   +GSS   PS   R  R       SP+
Sbjct: 628 SPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSS---PSRSTREAR-------SPQ 677

Query: 64  VALGPLQRSAPAANPRLSQTAAQAHPPR--GSTSVYLRPRSRRSVRP-RPHSRFPGP 117
               P +R +P+  PR  QT++   P R   S+S   R     S RP R  SR P P
Sbjct: 678 ----PNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEP 730



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 38/141 (26%), Positives = 52/141 (36%), Gaps = 30/141 (21%)

Query: 6   TERRRRPRAGPSLPRG-----AARGKGALPAAASP-------------TSRGSSNFPPSA 47
           TE+R  P   P  PR      +   KG   AAA               +S  S +   S 
Sbjct: 445 TEKRESPSPAPK-PRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSE 503

Query: 48  RRRTGRARFRNF-VSPRVALGPLQRSAPAANPRLSQTAAQAH-------PP---RGSTSV 96
             R  R+  +N  V  R    P + ++P+   R  +T+ +         PP   R S S 
Sbjct: 504 DERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSP 563

Query: 97  YLRPRSRRSVRPRPHSRFPGP 117
              PR RR+  P P  R P P
Sbjct: 564 APPPRRRRTPTPPPRRRTPSP 584


>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
           sapiens]
          Length = 459

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 43/137 (31%), Positives = 55/137 (40%), Gaps = 23/137 (16%)

Query: 11  RPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQ 70
           R R   + P  AA   G  P+ A P S  S+   P ARR + RA     + PR       
Sbjct: 149 RTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRA-----LQPR------- 196

Query: 71  RSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAKFPNMDSF 130
            +AP A    S++ +QA PP         P SRR   PR  SR        +  P+    
Sbjct: 197 HAAPDAPGAPSRSTSQATPPPAPRF----PASRRPGAPRLLSRTRQRELGGSAAPS---- 248

Query: 131 VRFVVFTGCVAEDNERG 147
              V F+G V    ERG
Sbjct: 249 ---VAFSGDVTLSLERG 262


>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
           sapiens]
          Length = 459

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 43/137 (31%), Positives = 55/137 (40%), Gaps = 23/137 (16%)

Query: 11  RPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQ 70
           R R   + P  AA   G  P+ A P S  S+   P ARR + RA     + PR       
Sbjct: 149 RTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRA-----LQPR------- 196

Query: 71  RSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAKFPNMDSF 130
            +AP A    S++ +QA PP         P SRR   PR  SR        +  P+    
Sbjct: 197 HAAPDAPGAPSRSTSQATPPPAPRF----PASRRPGAPRLLSRTRQRELGGSAAPS---- 248

Query: 131 VRFVVFTGCVAEDNERG 147
              V F+G V    ERG
Sbjct: 249 ---VAFSGDVTLSLERG 262


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 34/101 (33%), Positives = 41/101 (40%), Gaps = 12/101 (11%)

Query: 10  RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVAL-GP 68
           R PR  P     AA G      A  P +RGS+  PP AR           ++  V+L   
Sbjct: 223 RAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARL---------LLASAVSLAAS 273

Query: 69  LQRSAPAANPRLSQTAAQ--AHPPRGSTSVYLRPRSRRSVR 107
           L RS P   PRL   +    A P  GS +  L P  RR  R
Sbjct: 274 LARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRR 314


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 34/101 (33%), Positives = 41/101 (40%), Gaps = 12/101 (11%)

Query: 10  RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVAL-GP 68
           R PR  P     AA G      A  P +RGS+  PP AR           ++  V+L   
Sbjct: 223 RAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARL---------LLASAVSLAAS 273

Query: 69  LQRSAPAANPRLSQTAAQ--AHPPRGSTSVYLRPRSRRSVR 107
           L RS P   PRL   +    A P  GS +  L P  RR  R
Sbjct: 274 LARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRR 314


>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
           sapiens]
          Length = 278

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 55/204 (26%), Positives = 72/204 (35%), Gaps = 34/204 (16%)

Query: 2   GQSATERRRRPRAGPS-LPRGAARG---KGALPAAASPTSRGSSNFPPSARRRTGRARFR 57
           G +  +   RPR  P+ LPR   RG   KG  PA  +P +   +  P            R
Sbjct: 30  GGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALP------------R 77

Query: 58  NFVSPRVALGPL-QRSAPAANPRLSQTAAQAHPPRGSTSVYLR------PRSRRSVRPRP 110
               P    GP  +RS P   PR S  AA        TS   R      P +RR +    
Sbjct: 78  PREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLS 137

Query: 111 HSRFPGP--SHSAAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATL 168
            SR  GP  + S A  P  +                E G + +G+            A  
Sbjct: 138 VSRSSGPPRARSCAPHPAREGMA--------TTRGPEAGLRVSGRGARAGSSTAPTRAQA 189

Query: 169 TPARDEFPPHFAAAPPTDRFTAAF 192
           +PAR  FPP    +PP    + AF
Sbjct: 190 SPARPGFPP-CLRSPPCPASSRAF 212


>gi|239754508 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 31/128 (24%)

Query: 15  GPSLPRGAA-----RGKGALPAAASPTSRGSSNFPPSARRRTGRARFRN----------F 59
           GP+ PRG A     +G  A PAAA+P +   S      RRR G  R R           F
Sbjct: 125 GPAFPRGRAVHYVGQGASAPPAAAAPGASACS------RRRNGGRRLRQASYLHSPAVIF 178

Query: 60  V---------SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRP 110
           +         +P VA   +Q + PA  P  ++ + +    R  T+  L P + R+    P
Sbjct: 179 ICGGNEVVSGAPSVAEPDIQIALPAP-PAPARWSREPQAARARTASPLCPATARASSSSP 237

Query: 111 HSRFPGPS 118
              FP PS
Sbjct: 238 APLFPSPS 245


>gi|239508747 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 31/128 (24%)

Query: 15  GPSLPRGAA-----RGKGALPAAASPTSRGSSNFPPSARRRTGRARFRN----------F 59
           GP+ PRG A     +G  A PAAA+P +   S      RRR G  R R           F
Sbjct: 125 GPAFPRGRAVHYVGQGASAPPAAAAPGASACS------RRRNGGRRLRQASYLHSPAVIF 178

Query: 60  V---------SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRP 110
           +         +P VA   +Q + PA  P  ++ + +    R  T+  L P + R+    P
Sbjct: 179 ICGGNEVVSGAPSVAEPDIQIALPAP-PAPARWSREPQAARARTASPLCPATARASSSSP 237

Query: 111 HSRFPGPS 118
              FP PS
Sbjct: 238 APLFPSPS 245


>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
          Length = 727

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 16/120 (13%)

Query: 16  PSLPRGAARGKGALPAAASPT----------SRGSSNFPPSARRRTGRARFRNFVSPRVA 65
           P LP  A     A P+AASP           +  S+  P S+   + R +  ++ SP VA
Sbjct: 315 PLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAPASSPADSPRPQASSY-SPAVA 373

Query: 66  LGPLQRSAPAANPRLSQ-TAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAKF 124
                 SAPA +   S+  AA A  PR  T+  +RP   + V    +S  PG ++S   +
Sbjct: 374 AS----SAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGANYSPTPY 429


>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 11/116 (9%)

Query: 9   RRRP-RAGPSLPRGAARGKGALPAAASPTSRGSSNFPP-----SARRRTGRAR-----FR 57
           R RP  +GPS P G +   G     ASP S GS+  PP     S R R+ RAR      R
Sbjct: 66  RSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLR 125

Query: 58  NFVSPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
            F S  ++L        ++  RL +   ++       S  L     RS+R R  SR
Sbjct: 126 RFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRSRSLSRSRLRSLRSRSRSR 181



 Score = 34.3 bits (77), Expect = 0.086
 Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 16/118 (13%)

Query: 1   MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRT--------- 51
           M + +  R   P + P  P  A+    +LP +    SR  S     +RRR+         
Sbjct: 3   MSRLSLPRPSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRR 62

Query: 52  GRARFRNFVS-PRVALGPLQRSAPA---ANPRLSQTAAQAHPPRGSTSVYLRPRSRRS 105
            R+R R F S P    GP     P+   A+P    +A    PPR S+   LR RSRR+
Sbjct: 63  SRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSS---LRSRSRRA 117


>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 11/116 (9%)

Query: 9   RRRP-RAGPSLPRGAARGKGALPAAASPTSRGSSNFPP-----SARRRTGRAR-----FR 57
           R RP  +GPS P G +   G     ASP S GS+  PP     S R R+ RAR      R
Sbjct: 66  RSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLR 125

Query: 58  NFVSPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
            F S  ++L        ++  RL +   ++       S  L     RS+R R  SR
Sbjct: 126 RFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRSRSLSRSRLRSLRSRSRSR 181



 Score = 34.3 bits (77), Expect = 0.086
 Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 16/118 (13%)

Query: 1   MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRT--------- 51
           M + +  R   P + P  P  A+    +LP +    SR  S     +RRR+         
Sbjct: 3   MSRLSLPRPSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRR 62

Query: 52  GRARFRNFVS-PRVALGPLQRSAPA---ANPRLSQTAAQAHPPRGSTSVYLRPRSRRS 105
            R+R R F S P    GP     P+   A+P    +A    PPR S+   LR RSRR+
Sbjct: 63  SRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSS---LRSRSRRA 117


>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
           sapiens]
          Length = 231

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 11/116 (9%)

Query: 9   RRRP-RAGPSLPRGAARGKGALPAAASPTSRGSSNFPP-----SARRRTGRAR-----FR 57
           R RP  +GPS P G +   G     ASP S GS+  PP     S R R+ RAR      R
Sbjct: 66  RSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLR 125

Query: 58  NFVSPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
            F S  ++L        ++  RL +   ++       S  L     RS+R R  SR
Sbjct: 126 RFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRSRSLSRSRLRSLRSRSRSR 181



 Score = 34.3 bits (77), Expect = 0.086
 Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 16/118 (13%)

Query: 1   MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRT--------- 51
           M + +  R   P + P  P  A+    +LP +    SR  S     +RRR+         
Sbjct: 3   MSRLSLPRPSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRR 62

Query: 52  GRARFRNFVS-PRVALGPLQRSAPA---ANPRLSQTAAQAHPPRGSTSVYLRPRSRRS 105
            R+R R F S P    GP     P+   A+P    +A    PPR S+   LR RSRR+
Sbjct: 63  SRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSS---LRSRSRRA 117


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 13/116 (11%)

Query: 4   SATERRRRPRAGPSLPRGAARGKGALPAAASPTS--RGSSNFPPSARRRTGRARFRNFVS 61
           S+   R R +A  + P   ARGK +    ++P+S  RG      + RRR  R R R    
Sbjct: 339 SSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRR--- 395

Query: 62  PRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGP 117
                    RS+ +A  R  +   +  PPRGS+    R RS         +  PGP
Sbjct: 396 --------SRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGP 443



 Score = 36.6 bits (83), Expect = 0.017
 Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 26/133 (19%)

Query: 4   SATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPR 63
           SA  RR R R  P+ PRG++R   +L  A S +  GS    P      G  R       R
Sbjct: 401 SAPRRRGRRRPRPAPPRGSSR---SLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKR 457

Query: 64  VALGPLQRSAPAANPRLSQTAAQAHPPRG-------STSVYLRPRS-----------RRS 105
               P     P A P  +  +  AH  RG       S S    PRS            RS
Sbjct: 458 AKERP-----PRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRS 512

Query: 106 VRPRPHSRFPGPS 118
              RPHS    PS
Sbjct: 513 AEKRPHSPSRSPS 525



 Score = 32.3 bits (72), Expect = 0.33
 Identities = 34/128 (26%), Positives = 47/128 (36%), Gaps = 24/128 (18%)

Query: 3   QSATERRRRPRAGPSLPRGAARGKGA------LPAAASPTSRGSSNFPPSARRRTGRARF 56
           +SA +R   P   PS  +  +R K          A A+   R S ++ P  +RR      
Sbjct: 511 RSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSP-- 568

Query: 57  RNFVSPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPG 116
            +F+ PR      +R  P   P           P  S+S      S RS     HSR P 
Sbjct: 569 -SFMEPRRITSARKRPIPYYRPS----------PSSSSSCLSSDYSTRS-----HSRSPS 612

Query: 117 PSHSAAKF 124
           P HS   +
Sbjct: 613 PGHSHGSY 620


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 2/106 (1%)

Query: 10   RRPRAGPSLPRGAARGKGALPAAASPTSR--GSSNFPPSARRRTGRARFRNFVSPRVALG 67
            RR R+    PRG  R +       + T+R    S    S  RR  R+R R+ V+ R   G
Sbjct: 1758 RRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGG 1817

Query: 68   PLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
                S   A    S+T+++    R  T    R RSR    P P  R
Sbjct: 1818 SGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKR 1863



 Score = 35.8 bits (81), Expect = 0.030
 Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 8/109 (7%)

Query: 12   PRAGPSLPRGAARGKGALPA-AASPTSRGSSNFPPSARRRTGRARFRNFVSPRV-ALGPL 69
            PRA P   R  +  KG  P+   S ++  S   PP  + RT R   R+   P+  +  P 
Sbjct: 1629 PRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPP--KSRTARRGSRSSPEPKTKSRTPP 1686

Query: 70   QRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPS 118
            +R +  ++P L++ A  +   R ++S    P +R    PR H R P  S
Sbjct: 1687 RRRSSRSSPELTRKARLSRRSRSASS---SPETRSRTPPR-HRRSPSVS 1731



 Score = 34.7 bits (78), Expect = 0.066
 Identities = 36/107 (33%), Positives = 44/107 (41%), Gaps = 12/107 (11%)

Query: 9   RRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGP 68
           R   R G S  R A RG+     + SP +RG S     ARR  GR+R R     R     
Sbjct: 546 RNTQRRGRS--RSARRGRSH---SRSPATRGRSRSRTPARR--GRSRSRTPARRR----- 593

Query: 69  LQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFP 115
            +   P      S+T A+    R  T    R R+R  VR R  SR P
Sbjct: 594 SRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSP 640



 Score = 34.7 bits (78), Expect = 0.066
 Identities = 34/106 (32%), Positives = 43/106 (40%), Gaps = 24/106 (22%)

Query: 8    RRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALG 67
            RRR  R+ P L R A   + +  A++SP +R  S  PP  RR           SP V+  
Sbjct: 1687 RRRSSRSSPELTRKARLSRRSRSASSSPETR--SRTPPRHRR-----------SPSVS-- 1731

Query: 68   PLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
                  PA   R S+    A  PR  T+      SRR   P P  R
Sbjct: 1732 ---SPEPAEKSRSSRRRRSASSPRTKTT------SRRGRSPSPKPR 1768



 Score = 32.7 bits (73), Expect = 0.25
 Identities = 35/123 (28%), Positives = 45/123 (36%), Gaps = 17/123 (13%)

Query: 6    TERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTG-------RARFRN 58
            T RR R R     P    R +   P      SR  S  PP  RRR+        R R R+
Sbjct: 1931 TRRRSRSRT----PTTRRRSRSRTPPVTRRRSR--SRTPPVTRRRSRSRTSPITRRRSRS 1984

Query: 59   FVSPRVALGPLQRSAPA----ANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRF 114
              SP        R++P     +  R S    +    R   ++  R RSR  + PR  SR 
Sbjct: 1985 RTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRS 2044

Query: 115  PGP 117
              P
Sbjct: 2045 RSP 2047



 Score = 32.3 bits (72), Expect = 0.33
 Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 24/116 (20%)

Query: 3    QSATERRRRPRAGPSLPRGAARGKG---ALPA------AASPTSRGSSNFPPSARRRTGR 53
            QS + RR+R R+   + R    G G     PA       +S   RG S  PP++R+R+  
Sbjct: 1795 QSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRS-- 1852

Query: 54   ARFRNFVSPRVALGPLQRSAPAANPRLSQTAAQAHP------PRGSTSVYLRPRSR 103
               R+  SP     P +RS   A+P   + +    P       R  TS   R RSR
Sbjct: 1853 ---RSRTSP----APWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSR 1901



 Score = 32.3 bits (72), Expect = 0.33
 Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 6/114 (5%)

Query: 5    ATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRV 64
            A  RR R R  P LPR  +R +  L        R  S  P +AR +    R    +  R 
Sbjct: 2025 AIRRRSRSRT-PLLPRKRSRSRSPLAIRR----RSRSRTPRTARGKRSLTRSPPAIRRRS 2079

Query: 65   ALGPLQ-RSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGP 117
            A G    RS  A  P     +    PP    S  +   SR S+ P P  R   P
Sbjct: 2080 ASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSP 2133



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 30/122 (24%), Positives = 44/122 (36%), Gaps = 19/122 (15%)

Query: 2    GQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSN--FPPSARRRTGRARFRNF 59
            G+S  +    P+A P  PR         P + SP+S   +N    P   R    +     
Sbjct: 1476 GRSECDSSPEPKALPQTPR---------PRSRSPSSPELNNKCLTPQRERSGSESSVDQK 1526

Query: 60   VSPRVALGPLQRSA--------PAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPH 111
               R  LG   RS         P+A+P+    +  +   +  T   LR RSR    P   
Sbjct: 1527 TVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVD 1586

Query: 112  SR 113
            S+
Sbjct: 1587 SK 1588



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 12/91 (13%)

Query: 31   AAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRSAPAANPRLSQTAAQAHPP 90
            AA +P S  S+   P+           N  SPRV L   +R +   +P L   A    PP
Sbjct: 2359 AALAPASLTSARMAPALSGA-------NLTSPRVPLSAYERVSGRTSPPLLDRARSRTPP 2411

Query: 91   RGSTSVYLRPRSRRSVRPRPHSRF-PGPSHS 120
              S     R  S R+  P P SR    PS S
Sbjct: 2412 --SAPSQSRMTSERA--PSPSSRMGQAPSQS 2438



 Score = 27.7 bits (60), Expect = 8.1
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 22/111 (19%)

Query: 6   TERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNF-PPSARRRTGRARFRNFVSPRV 64
           + R  R R+  +  RG +R +       +PT RG S    P  RR     R+    SP  
Sbjct: 478 SRRMGRSRSPATAKRGRSRSR-------TPTKRGHSRSRSPQWRRSRSAQRWGRSRSP-- 528

Query: 65  ALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFP 115
                QR   + +P+    +   +  R       R RSR + R R HSR P
Sbjct: 529 -----QRRGRSRSPQRPGWSRSRNTQR-------RGRSRSARRGRSHSRSP 567


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 44/171 (25%), Positives = 58/171 (33%), Gaps = 35/171 (20%)

Query: 13  RAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRS 72
           RAGP+ P   A G+G   A     + G++   P+   R G A                 +
Sbjct: 97  RAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGA----------------TA 140

Query: 73  APAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAKFPNMDSFVR 132
           A +A  R S  A +  PP G TS+    R+ R        R P  S   A  P   +   
Sbjct: 141 ASSAGTR-SVPARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGA--- 196

Query: 133 FVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFAAAP 183
                         G  GT   GF     P   A++ P     PP  A AP
Sbjct: 197 -----------PRPGAPGTWPVGFAVAAPPAAAASVAPP----PPAVAGAP 232


>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 350

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 40/139 (28%), Positives = 54/139 (38%), Gaps = 26/139 (18%)

Query: 3   QSATERRRRPRA---GPSLPRGAAR-GKGALP---AAASPTSRGSSNFPPS------ARR 49
           + ATE    P      P+ PR   + G  A P   +A+S  +  SS+FPP       + R
Sbjct: 4   EKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSR 63

Query: 50  RTGRARFRNFVS------PRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSR 103
               +R R   +      PRV  G   R+   A  RL   AA AH    +     R R R
Sbjct: 64  AAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRR 123

Query: 104 RSVRP-------RPHSRFP 115
               P        PH+R+P
Sbjct: 124 PGPSPPLQPRSRHPHTRYP 142



 Score = 32.3 bits (72), Expect = 0.33
 Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 8/108 (7%)

Query: 12  PRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQR 71
           PR  P +  GA    GAL A +   +  ++     A   TGR R+R    P   L P  R
Sbjct: 78  PRLLPRVLAGAPARTGAL-AGSRLRAAAAAAHDQEAAAPTGR-RWRRRPGPSPPLQPRSR 135

Query: 72  SAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRP---HSRFPG 116
                 PR    A    PP G+     R +SR   R  P    SR PG
Sbjct: 136 HPHTRYPRAVPEATPLRPPPGTRP---RAKSRPGCRSSPFPARSRTPG 180



 Score = 31.2 bits (69), Expect = 0.73
 Identities = 36/108 (33%), Positives = 40/108 (37%), Gaps = 22/108 (20%)

Query: 6   TERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVA 65
           T RR R R GPS P               P SR      P A       R      PR  
Sbjct: 116 TGRRWRRRPGPSPP-------------LQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAK 162

Query: 66  LGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
             P  RS+P   P  S+T  +A PPRG      RP   R+ RP  H R
Sbjct: 163 SRPGCRSSPF--PARSRTPGEAGPPRGDP----RP---RAPRPGDHPR 201


>gi|239756892 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 576

 Score = 34.7 bits (78), Expect = 0.066
 Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 24/112 (21%)

Query: 31  AAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRSAPAANP------------ 78
           AA      G++  P S RRR G  R   +  P     P +R+AP A P            
Sbjct: 261 AALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARPDAAGEQCPRPAG 320

Query: 79  -RLSQTAAQAHPPRGSTSV---------YLRPRSRRSVRPRPHSRFPGPSHS 120
            R  Q   +  P  GS S          Y RP+S  S  P   SR P  S++
Sbjct: 321 ARPRQAEIETDPETGSDSFSTWTSYEFNYARPKSHSS--PLSTSRDPKSSYT 370


>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 344

 Score = 34.7 bits (78), Expect = 0.066
 Identities = 44/128 (34%), Positives = 53/128 (41%), Gaps = 19/128 (14%)

Query: 10  RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFP-PSARRRTGRARFRNFVSPRVALGP 68
           RR    P    G  RG+G    AA+ + R S   P PS R     AR R  +  R   G 
Sbjct: 172 RRSDVQPQERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGR---SAARRRRRLRRRRRRG- 227

Query: 69  LQRSAPAANPRLS------QTAAQ--AHPPRGSTSVYLRPR-----SRRSVRPRPHSRFP 115
            +R+A AA   L       Q AAQ  A P   + +   RPR     SR   RPRPH   P
Sbjct: 228 -ERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASP 286

Query: 116 GPSHSAAK 123
            P   A +
Sbjct: 287 APGDGALR 294


>gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo
           sapiens]
          Length = 404

 Score = 34.7 bits (78), Expect = 0.066
 Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 24/112 (21%)

Query: 31  AAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRSAPAANP------------ 78
           AA      G++  P S RRR G  R   +  P     P +R+AP A P            
Sbjct: 261 AALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARPDAAGEQCPRPAG 320

Query: 79  -RLSQTAAQAHPPRGSTSV---------YLRPRSRRSVRPRPHSRFPGPSHS 120
            R  Q   +  P  GS S          Y RP+S  S  P   SR P  S++
Sbjct: 321 ARPRQAEIETDPETGSDSFSTWTSYEFNYARPKSHSS--PLSTSRDPKSSYT 370


>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 344

 Score = 34.7 bits (78), Expect = 0.066
 Identities = 44/128 (34%), Positives = 53/128 (41%), Gaps = 19/128 (14%)

Query: 10  RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFP-PSARRRTGRARFRNFVSPRVALGP 68
           RR    P    G  RG+G    AA+ + R S   P PS R     AR R  +  R   G 
Sbjct: 172 RRSDVQPQERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGR---SAARRRRRLRRRRRRG- 227

Query: 69  LQRSAPAANPRLS------QTAAQ--AHPPRGSTSVYLRPR-----SRRSVRPRPHSRFP 115
            +R+A AA   L       Q AAQ  A P   + +   RPR     SR   RPRPH   P
Sbjct: 228 -ERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASP 286

Query: 116 GPSHSAAK 123
            P   A +
Sbjct: 287 APGDGALR 294


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 34.7 bits (78), Expect = 0.066
 Identities = 42/136 (30%), Positives = 53/136 (38%), Gaps = 18/136 (13%)

Query: 5   ATERRRRPRAGPS-LPRGAARGKGALPAAASPTSRGSSNFPPSARRRT-----GRARFRN 58
           AT     PRAGP+   R  A G+G     A  TS G  + P  A   T     G+   R 
Sbjct: 68  ATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRI 127

Query: 59  FVSPRVALGPL----QRSAPAANPRLSQTA--------AQAHPPRGSTSVYLRPRSRRSV 106
                VA G      +RSA +A  R   +         A A   R + +    PR   S 
Sbjct: 128 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 187

Query: 107 RPRPHSRFPGPSHSAA 122
           RPRP +  P  S S+A
Sbjct: 188 RPRPPTEGPRKSVSSA 203


>gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo
           sapiens]
          Length = 404

 Score = 34.7 bits (78), Expect = 0.066
 Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 24/112 (21%)

Query: 31  AAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRSAPAANP------------ 78
           AA      G++  P S RRR G  R   +  P     P +R+AP A P            
Sbjct: 261 AALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARPDAAGEQCPRPAG 320

Query: 79  -RLSQTAAQAHPPRGSTSV---------YLRPRSRRSVRPRPHSRFPGPSHS 120
            R  Q   +  P  GS S          Y RP+S  S  P   SR P  S++
Sbjct: 321 ARPRQAEIETDPETGSDSFSTWTSYEFNYARPKSHSS--PLSTSRDPKSSYT 370


>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
           sapiens]
          Length = 344

 Score = 34.7 bits (78), Expect = 0.066
 Identities = 44/128 (34%), Positives = 53/128 (41%), Gaps = 19/128 (14%)

Query: 10  RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFP-PSARRRTGRARFRNFVSPRVALGP 68
           RR    P    G  RG+G    AA+ + R S   P PS R     AR R  +  R   G 
Sbjct: 172 RRSDVQPQERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGR---SAARRRRRLRRRRRRG- 227

Query: 69  LQRSAPAANPRLS------QTAAQ--AHPPRGSTSVYLRPR-----SRRSVRPRPHSRFP 115
            +R+A AA   L       Q AAQ  A P   + +   RPR     SR   RPRPH   P
Sbjct: 228 -ERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASP 286

Query: 116 GPSHSAAK 123
            P   A +
Sbjct: 287 APGDGALR 294


>gi|54873613 agrin [Homo sapiens]
          Length = 2045

 Score = 34.3 bits (77), Expect = 0.086
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 27   GALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRSAPAANPRLSQTAAQ 86
            GALP A S T+   +  PPS+R RT  +  R  V P + + P   +AP+  P L    A 
Sbjct: 1002 GALPLAPSSTAHSQTTPPPSSRPRTTASVPRTTVWPVLTVPP---TAPSPAPSL---VAS 1055

Query: 87   AHPPRGST 94
            A    GST
Sbjct: 1056 AFGESGST 1063


>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 316

 Score = 34.3 bits (77), Expect = 0.086
 Identities = 34/119 (28%), Positives = 44/119 (36%), Gaps = 20/119 (16%)

Query: 13  RAGPSLPRGA--------ARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRV 64
           RAG   PRGA        A G+G         +RG   FP +     G AR R   SP  
Sbjct: 73  RAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG-ARSRGCHSPSC 131

Query: 65  ALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAK 123
                 RS+  A  R  Q   +   PR S ++ +       + PRP    P   H  A+
Sbjct: 132 C-----RSSSCAWHRWPQLRGREADPRASPALLI------CIAPRPRPALPAALHIGAR 179


>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 34.3 bits (77), Expect = 0.086
 Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 23/117 (19%)

Query: 10  RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPL 69
           RRP   P  P+GAA G  + P AA+P +      PP+ R             P   L   
Sbjct: 103 RRPGKPPRRPKGAA-GHPSAPPAAAPAAPAQ---PPAPR-------------PESQLSDR 145

Query: 70  QRS---APAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAK 123
            +S    P    R +++A  A PP G  +   + R  R  RPR  +   G +H  ++
Sbjct: 146 PQSWEQKPRGPGRSARSAGAAAPPAGGLA---QARQARRRRPRAAAALTGRTHQRSR 199


>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
           sapiens]
          Length = 304

 Score = 34.3 bits (77), Expect = 0.086
 Identities = 34/119 (28%), Positives = 44/119 (36%), Gaps = 20/119 (16%)

Query: 13  RAGPSLPRGA--------ARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRV 64
           RAG   PRGA        A G+G         +RG   FP +     G AR R   SP  
Sbjct: 73  RAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG-ARSRGCHSPSC 131

Query: 65  ALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAK 123
                 RS+  A  R  Q   +   PR S ++ +       + PRP    P   H  A+
Sbjct: 132 C-----RSSSCAWHRWPQLRGREAEPRASPALLI------CIAPRPRPALPAALHIGAR 179


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.134    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,525,217
Number of Sequences: 37866
Number of extensions: 574649
Number of successful extensions: 3389
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 295
Number of HSP's that attempted gapping in prelim test: 3127
Number of HSP's gapped (non-prelim): 532
length of query: 221
length of database: 18,247,518
effective HSP length: 98
effective length of query: 123
effective length of database: 14,536,650
effective search space: 1788007950
effective search space used: 1788007950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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