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Search of human proteins with 239744595
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744595 PREDICTED: hypothetical protein XP_002343205 [Homo
sapiens]
(221 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750286 PREDICTED: hypothetical protein XP_002347353 [Homo ... 456 e-129
gi|239744595 PREDICTED: hypothetical protein XP_002343205 [Homo ... 456 e-129
gi|239755784 PREDICTED: hypothetical protein [Homo sapiens] 453 e-128
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 45 5e-05
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 40 0.002
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 40 0.002
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 38 0.006
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 38 0.006
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 38 0.008
gi|239754508 PREDICTED: hypothetical protein [Homo sapiens] 37 0.010
gi|239508747 PREDICTED: hypothetical protein [Homo sapiens] 37 0.010
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 37 0.017
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens] 37 0.017
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens] 37 0.017
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ... 37 0.017
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 37 0.017
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 37 0.017
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 35 0.051
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 35 0.051
gi|239756892 PREDICTED: hypothetical protein [Homo sapiens] 35 0.066
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 35 0.066
gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo ... 35 0.066
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 35 0.066
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 35 0.066
gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo ... 35 0.066
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 35 0.066
gi|54873613 agrin [Homo sapiens] 34 0.086
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 34 0.086
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 34 0.086
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 34 0.086
>gi|239750286 PREDICTED: hypothetical protein XP_002347353 [Homo
sapiens]
Length = 221
Score = 456 bits (1173), Expect = e-129
Identities = 221/221 (100%), Positives = 221/221 (100%)
Query: 1 MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60
MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV
Sbjct: 1 MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60
Query: 61 SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120
SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS
Sbjct: 61 SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120
Query: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180
AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA
Sbjct: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180
Query: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221
AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC
Sbjct: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221
>gi|239744595 PREDICTED: hypothetical protein XP_002343205 [Homo
sapiens]
Length = 221
Score = 456 bits (1173), Expect = e-129
Identities = 221/221 (100%), Positives = 221/221 (100%)
Query: 1 MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60
MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV
Sbjct: 1 MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60
Query: 61 SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120
SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS
Sbjct: 61 SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120
Query: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180
AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA
Sbjct: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180
Query: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221
AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC
Sbjct: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221
>gi|239755784 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 453 bits (1165), Expect = e-128
Identities = 220/221 (99%), Positives = 220/221 (99%)
Query: 1 MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60
MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV
Sbjct: 1 MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFV 60
Query: 61 SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120
SP VALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS
Sbjct: 61 SPCVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHS 120
Query: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180
AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA
Sbjct: 121 AAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFA 180
Query: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221
AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC
Sbjct: 181 AAPPTDRFTAAFLHSRRLRCGVPCSRPEDVAFLALSSYAFC 221
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 45.1 bits (105), Expect = 5e-05
Identities = 36/111 (32%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Query: 3 QSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSP 62
Q T R R R PS P R P+ A P R + PP RR R SP
Sbjct: 537 QKETSPRGRRRRSPSPPPTRRRRS---PSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSP 593
Query: 63 RVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
R P+QR + P +TA+ PP+ S P+ R S P P R
Sbjct: 594 RRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQR 644
Score = 33.9 bits (76), Expect = 0.11
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 4 SATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPR 63
S +RR + P R + K P+ +S +GSS PS R R SP+
Sbjct: 628 SPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSS---PSRSTREAR-------SPQ 677
Query: 64 VALGPLQRSAPAANPRLSQTAAQAHPPR--GSTSVYLRPRSRRSVRP-RPHSRFPGP 117
P +R +P+ PR QT++ P R S+S R S RP R SR P P
Sbjct: 678 ----PNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEP 730
Score = 28.5 bits (62), Expect = 4.7
Identities = 38/141 (26%), Positives = 52/141 (36%), Gaps = 30/141 (21%)
Query: 6 TERRRRPRAGPSLPRG-----AARGKGALPAAASP-------------TSRGSSNFPPSA 47
TE+R P P PR + KG AAA +S S + S
Sbjct: 445 TEKRESPSPAPK-PRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSE 503
Query: 48 RRRTGRARFRNF-VSPRVALGPLQRSAPAANPRLSQTAAQAH-------PP---RGSTSV 96
R R+ +N V R P + ++P+ R +T+ + PP R S S
Sbjct: 504 DERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSP 563
Query: 97 YLRPRSRRSVRPRPHSRFPGP 117
PR RR+ P P R P P
Sbjct: 564 APPPRRRRTPTPPPRRRTPSP 584
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 40.0 bits (92), Expect = 0.002
Identities = 43/137 (31%), Positives = 55/137 (40%), Gaps = 23/137 (16%)
Query: 11 RPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQ 70
R R + P AA G P+ A P S S+ P ARR + RA + PR
Sbjct: 149 RTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRA-----LQPR------- 196
Query: 71 RSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAKFPNMDSF 130
+AP A S++ +QA PP P SRR PR SR + P+
Sbjct: 197 HAAPDAPGAPSRSTSQATPPPAPRF----PASRRPGAPRLLSRTRQRELGGSAAPS---- 248
Query: 131 VRFVVFTGCVAEDNERG 147
V F+G V ERG
Sbjct: 249 ---VAFSGDVTLSLERG 262
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 40.0 bits (92), Expect = 0.002
Identities = 43/137 (31%), Positives = 55/137 (40%), Gaps = 23/137 (16%)
Query: 11 RPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQ 70
R R + P AA G P+ A P S S+ P ARR + RA + PR
Sbjct: 149 RTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRA-----LQPR------- 196
Query: 71 RSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAKFPNMDSF 130
+AP A S++ +QA PP P SRR PR SR + P+
Sbjct: 197 HAAPDAPGAPSRSTSQATPPPAPRF----PASRRPGAPRLLSRTRQRELGGSAAPS---- 248
Query: 131 VRFVVFTGCVAEDNERG 147
V F+G V ERG
Sbjct: 249 ---VAFSGDVTLSLERG 262
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 38.1 bits (87), Expect = 0.006
Identities = 34/101 (33%), Positives = 41/101 (40%), Gaps = 12/101 (11%)
Query: 10 RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVAL-GP 68
R PR P AA G A P +RGS+ PP AR ++ V+L
Sbjct: 223 RAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARL---------LLASAVSLAAS 273
Query: 69 LQRSAPAANPRLSQTAAQ--AHPPRGSTSVYLRPRSRRSVR 107
L RS P PRL + A P GS + L P RR R
Sbjct: 274 LARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRR 314
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 38.1 bits (87), Expect = 0.006
Identities = 34/101 (33%), Positives = 41/101 (40%), Gaps = 12/101 (11%)
Query: 10 RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVAL-GP 68
R PR P AA G A P +RGS+ PP AR ++ V+L
Sbjct: 223 RAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARL---------LLASAVSLAAS 273
Query: 69 LQRSAPAANPRLSQTAAQ--AHPPRGSTSVYLRPRSRRSVR 107
L RS P PRL + A P GS + L P RR R
Sbjct: 274 LARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRR 314
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 37.7 bits (86), Expect = 0.008
Identities = 55/204 (26%), Positives = 72/204 (35%), Gaps = 34/204 (16%)
Query: 2 GQSATERRRRPRAGPS-LPRGAARG---KGALPAAASPTSRGSSNFPPSARRRTGRARFR 57
G + + RPR P+ LPR RG KG PA +P + + P R
Sbjct: 30 GGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALP------------R 77
Query: 58 NFVSPRVALGPL-QRSAPAANPRLSQTAAQAHPPRGSTSVYLR------PRSRRSVRPRP 110
P GP +RS P PR S AA TS R P +RR +
Sbjct: 78 PREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLS 137
Query: 111 HSRFPGP--SHSAAKFPNMDSFVRFVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATL 168
SR GP + S A P + E G + +G+ A
Sbjct: 138 VSRSSGPPRARSCAPHPAREGMA--------TTRGPEAGLRVSGRGARAGSSTAPTRAQA 189
Query: 169 TPARDEFPPHFAAAPPTDRFTAAF 192
+PAR FPP +PP + AF
Sbjct: 190 SPARPGFPP-CLRSPPCPASSRAF 212
>gi|239754508 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 37.4 bits (85), Expect = 0.010
Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 31/128 (24%)
Query: 15 GPSLPRGAA-----RGKGALPAAASPTSRGSSNFPPSARRRTGRARFRN----------F 59
GP+ PRG A +G A PAAA+P + S RRR G R R F
Sbjct: 125 GPAFPRGRAVHYVGQGASAPPAAAAPGASACS------RRRNGGRRLRQASYLHSPAVIF 178
Query: 60 V---------SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRP 110
+ +P VA +Q + PA P ++ + + R T+ L P + R+ P
Sbjct: 179 ICGGNEVVSGAPSVAEPDIQIALPAP-PAPARWSREPQAARARTASPLCPATARASSSSP 237
Query: 111 HSRFPGPS 118
FP PS
Sbjct: 238 APLFPSPS 245
>gi|239508747 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 37.4 bits (85), Expect = 0.010
Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 31/128 (24%)
Query: 15 GPSLPRGAA-----RGKGALPAAASPTSRGSSNFPPSARRRTGRARFRN----------F 59
GP+ PRG A +G A PAAA+P + S RRR G R R F
Sbjct: 125 GPAFPRGRAVHYVGQGASAPPAAAAPGASACS------RRRNGGRRLRQASYLHSPAVIF 178
Query: 60 V---------SPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRP 110
+ +P VA +Q + PA P ++ + + R T+ L P + R+ P
Sbjct: 179 ICGGNEVVSGAPSVAEPDIQIALPAP-PAPARWSREPQAARARTASPLCPATARASSSSP 237
Query: 111 HSRFPGPS 118
FP PS
Sbjct: 238 APLFPSPS 245
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 36.6 bits (83), Expect = 0.017
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 16 PSLPRGAARGKGALPAAASPT----------SRGSSNFPPSARRRTGRARFRNFVSPRVA 65
P LP A A P+AASP + S+ P S+ + R + ++ SP VA
Sbjct: 315 PLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAPASSPADSPRPQASSY-SPAVA 373
Query: 66 LGPLQRSAPAANPRLSQ-TAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAKF 124
SAPA + S+ AA A PR T+ +RP + V +S PG ++S +
Sbjct: 374 AS----SAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGANYSPTPY 429
>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 36.6 bits (83), Expect = 0.017
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 9 RRRP-RAGPSLPRGAARGKGALPAAASPTSRGSSNFPP-----SARRRTGRAR-----FR 57
R RP +GPS P G + G ASP S GS+ PP S R R+ RAR R
Sbjct: 66 RSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLR 125
Query: 58 NFVSPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
F S ++L ++ RL + ++ S L RS+R R SR
Sbjct: 126 RFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRSRSLSRSRLRSLRSRSRSR 181
Score = 34.3 bits (77), Expect = 0.086
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 1 MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRT--------- 51
M + + R P + P P A+ +LP + SR S +RRR+
Sbjct: 3 MSRLSLPRPSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRR 62
Query: 52 GRARFRNFVS-PRVALGPLQRSAPA---ANPRLSQTAAQAHPPRGSTSVYLRPRSRRS 105
R+R R F S P GP P+ A+P +A PPR S+ LR RSRR+
Sbjct: 63 SRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSS---LRSRSRRA 117
>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 36.6 bits (83), Expect = 0.017
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 9 RRRP-RAGPSLPRGAARGKGALPAAASPTSRGSSNFPP-----SARRRTGRAR-----FR 57
R RP +GPS P G + G ASP S GS+ PP S R R+ RAR R
Sbjct: 66 RSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLR 125
Query: 58 NFVSPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
F S ++L ++ RL + ++ S L RS+R R SR
Sbjct: 126 RFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRSRSLSRSRLRSLRSRSRSR 181
Score = 34.3 bits (77), Expect = 0.086
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 1 MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRT--------- 51
M + + R P + P P A+ +LP + SR S +RRR+
Sbjct: 3 MSRLSLPRPSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRR 62
Query: 52 GRARFRNFVS-PRVALGPLQRSAPA---ANPRLSQTAAQAHPPRGSTSVYLRPRSRRS 105
R+R R F S P GP P+ A+P +A PPR S+ LR RSRR+
Sbjct: 63 SRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSS---LRSRSRRA 117
>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
sapiens]
Length = 231
Score = 36.6 bits (83), Expect = 0.017
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 9 RRRP-RAGPSLPRGAARGKGALPAAASPTSRGSSNFPP-----SARRRTGRAR-----FR 57
R RP +GPS P G + G ASP S GS+ PP S R R+ RAR R
Sbjct: 66 RSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLR 125
Query: 58 NFVSPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
F S ++L ++ RL + ++ S L RS+R R SR
Sbjct: 126 RFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRSRSLSRSRLRSLRSRSRSR 181
Score = 34.3 bits (77), Expect = 0.086
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 1 MGQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRT--------- 51
M + + R P + P P A+ +LP + SR S +RRR+
Sbjct: 3 MSRLSLPRPSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRR 62
Query: 52 GRARFRNFVS-PRVALGPLQRSAPA---ANPRLSQTAAQAHPPRGSTSVYLRPRSRRS 105
R+R R F S P GP P+ A+P +A PPR S+ LR RSRR+
Sbjct: 63 SRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSS---LRSRSRRA 117
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 36.6 bits (83), Expect = 0.017
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 4 SATERRRRPRAGPSLPRGAARGKGALPAAASPTS--RGSSNFPPSARRRTGRARFRNFVS 61
S+ R R +A + P ARGK + ++P+S RG + RRR R R R
Sbjct: 339 SSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRR--- 395
Query: 62 PRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGP 117
RS+ +A R + + PPRGS+ R RS + PGP
Sbjct: 396 --------SRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGP 443
Score = 36.6 bits (83), Expect = 0.017
Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 26/133 (19%)
Query: 4 SATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPR 63
SA RR R R P+ PRG++R +L A S + GS P G R R
Sbjct: 401 SAPRRRGRRRPRPAPPRGSSR---SLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKR 457
Query: 64 VALGPLQRSAPAANPRLSQTAAQAHPPRG-------STSVYLRPRS-----------RRS 105
P P A P + + AH RG S S PRS RS
Sbjct: 458 AKERP-----PRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRS 512
Query: 106 VRPRPHSRFPGPS 118
RPHS PS
Sbjct: 513 AEKRPHSPSRSPS 525
Score = 32.3 bits (72), Expect = 0.33
Identities = 34/128 (26%), Positives = 47/128 (36%), Gaps = 24/128 (18%)
Query: 3 QSATERRRRPRAGPSLPRGAARGKGA------LPAAASPTSRGSSNFPPSARRRTGRARF 56
+SA +R P PS + +R K A A+ R S ++ P +RR
Sbjct: 511 RSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSP-- 568
Query: 57 RNFVSPRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPG 116
+F+ PR +R P P P S+S S RS HSR P
Sbjct: 569 -SFMEPRRITSARKRPIPYYRPS----------PSSSSSCLSSDYSTRS-----HSRSPS 612
Query: 117 PSHSAAKF 124
P HS +
Sbjct: 613 PGHSHGSY 620
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 36.6 bits (83), Expect = 0.017
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Query: 10 RRPRAGPSLPRGAARGKGALPAAASPTSR--GSSNFPPSARRRTGRARFRNFVSPRVALG 67
RR R+ PRG R + + T+R S S RR R+R R+ V+ R G
Sbjct: 1758 RRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGG 1817
Query: 68 PLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
S A S+T+++ R T R RSR P P R
Sbjct: 1818 SGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKR 1863
Score = 35.8 bits (81), Expect = 0.030
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 12 PRAGPSLPRGAARGKGALPA-AASPTSRGSSNFPPSARRRTGRARFRNFVSPRV-ALGPL 69
PRA P R + KG P+ S ++ S PP + RT R R+ P+ + P
Sbjct: 1629 PRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPP--KSRTARRGSRSSPEPKTKSRTPP 1686
Query: 70 QRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPS 118
+R + ++P L++ A + R ++S P +R PR H R P S
Sbjct: 1687 RRRSSRSSPELTRKARLSRRSRSASS---SPETRSRTPPR-HRRSPSVS 1731
Score = 34.7 bits (78), Expect = 0.066
Identities = 36/107 (33%), Positives = 44/107 (41%), Gaps = 12/107 (11%)
Query: 9 RRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGP 68
R R G S R A RG+ + SP +RG S ARR GR+R R R
Sbjct: 546 RNTQRRGRS--RSARRGRSH---SRSPATRGRSRSRTPARR--GRSRSRTPARRR----- 593
Query: 69 LQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFP 115
+ P S+T A+ R T R R+R VR R SR P
Sbjct: 594 SRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSP 640
Score = 34.7 bits (78), Expect = 0.066
Identities = 34/106 (32%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 8 RRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALG 67
RRR R+ P L R A + + A++SP +R S PP RR SP V+
Sbjct: 1687 RRRSSRSSPELTRKARLSRRSRSASSSPETR--SRTPPRHRR-----------SPSVS-- 1731
Query: 68 PLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
PA R S+ A PR T+ SRR P P R
Sbjct: 1732 ---SPEPAEKSRSSRRRRSASSPRTKTT------SRRGRSPSPKPR 1768
Score = 32.7 bits (73), Expect = 0.25
Identities = 35/123 (28%), Positives = 45/123 (36%), Gaps = 17/123 (13%)
Query: 6 TERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTG-------RARFRN 58
T RR R R P R + P SR S PP RRR+ R R R+
Sbjct: 1931 TRRRSRSRT----PTTRRRSRSRTPPVTRRRSR--SRTPPVTRRRSRSRTSPITRRRSRS 1984
Query: 59 FVSPRVALGPLQRSAPA----ANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRF 114
SP R++P + R S + R ++ R RSR + PR SR
Sbjct: 1985 RTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRS 2044
Query: 115 PGP 117
P
Sbjct: 2045 RSP 2047
Score = 32.3 bits (72), Expect = 0.33
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 24/116 (20%)
Query: 3 QSATERRRRPRAGPSLPRGAARGKG---ALPA------AASPTSRGSSNFPPSARRRTGR 53
QS + RR+R R+ + R G G PA +S RG S PP++R+R+
Sbjct: 1795 QSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRS-- 1852
Query: 54 ARFRNFVSPRVALGPLQRSAPAANPRLSQTAAQAHP------PRGSTSVYLRPRSR 103
R+ SP P +RS A+P + + P R TS R RSR
Sbjct: 1853 ---RSRTSP----APWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSR 1901
Score = 32.3 bits (72), Expect = 0.33
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 6/114 (5%)
Query: 5 ATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRV 64
A RR R R P LPR +R + L R S P +AR + R + R
Sbjct: 2025 AIRRRSRSRT-PLLPRKRSRSRSPLAIRR----RSRSRTPRTARGKRSLTRSPPAIRRRS 2079
Query: 65 ALGPLQ-RSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGP 117
A G RS A P + PP S + SR S+ P P R P
Sbjct: 2080 ASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSP 2133
Score = 30.0 bits (66), Expect = 1.6
Identities = 30/122 (24%), Positives = 44/122 (36%), Gaps = 19/122 (15%)
Query: 2 GQSATERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSN--FPPSARRRTGRARFRNF 59
G+S + P+A P PR P + SP+S +N P R +
Sbjct: 1476 GRSECDSSPEPKALPQTPR---------PRSRSPSSPELNNKCLTPQRERSGSESSVDQK 1526
Query: 60 VSPRVALGPLQRSA--------PAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPH 111
R LG RS P+A+P+ + + + T LR RSR P
Sbjct: 1527 TVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVD 1586
Query: 112 SR 113
S+
Sbjct: 1587 SK 1588
Score = 28.5 bits (62), Expect = 4.7
Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
Query: 31 AAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRSAPAANPRLSQTAAQAHPP 90
AA +P S S+ P+ N SPRV L +R + +P L A PP
Sbjct: 2359 AALAPASLTSARMAPALSGA-------NLTSPRVPLSAYERVSGRTSPPLLDRARSRTPP 2411
Query: 91 RGSTSVYLRPRSRRSVRPRPHSRF-PGPSHS 120
S R S R+ P P SR PS S
Sbjct: 2412 --SAPSQSRMTSERA--PSPSSRMGQAPSQS 2438
Score = 27.7 bits (60), Expect = 8.1
Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 6 TERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNF-PPSARRRTGRARFRNFVSPRV 64
+ R R R+ + RG +R + +PT RG S P RR R+ SP
Sbjct: 478 SRRMGRSRSPATAKRGRSRSR-------TPTKRGHSRSRSPQWRRSRSAQRWGRSRSP-- 528
Query: 65 ALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFP 115
QR + +P+ + + R R RSR + R R HSR P
Sbjct: 529 -----QRRGRSRSPQRPGWSRSRNTQR-------RGRSRSARRGRSHSRSP 567
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 35.0 bits (79), Expect = 0.051
Identities = 44/171 (25%), Positives = 58/171 (33%), Gaps = 35/171 (20%)
Query: 13 RAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRS 72
RAGP+ P A G+G A + G++ P+ R G A +
Sbjct: 97 RAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGA----------------TA 140
Query: 73 APAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAKFPNMDSFVR 132
A +A R S A + PP G TS+ R+ R R P S A P +
Sbjct: 141 ASSAGTR-SVPARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGA--- 196
Query: 133 FVVFTGCVAEDNERGFKGTGQEGFCAGCAPYLYATLTPARDEFPPHFAAAP 183
G GT GF P A++ P PP A AP
Sbjct: 197 -----------PRPGAPGTWPVGFAVAAPPAAAASVAPP----PPAVAGAP 232
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 35.0 bits (79), Expect = 0.051
Identities = 40/139 (28%), Positives = 54/139 (38%), Gaps = 26/139 (18%)
Query: 3 QSATERRRRPRA---GPSLPRGAAR-GKGALP---AAASPTSRGSSNFPPS------ARR 49
+ ATE P P+ PR + G A P +A+S + SS+FPP + R
Sbjct: 4 EKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSR 63
Query: 50 RTGRARFRNFVS------PRVALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSR 103
+R R + PRV G R+ A RL AA AH + R R R
Sbjct: 64 AAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRR 123
Query: 104 RSVRP-------RPHSRFP 115
P PH+R+P
Sbjct: 124 PGPSPPLQPRSRHPHTRYP 142
Score = 32.3 bits (72), Expect = 0.33
Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 8/108 (7%)
Query: 12 PRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQR 71
PR P + GA GAL A + + ++ A TGR R+R P L P R
Sbjct: 78 PRLLPRVLAGAPARTGAL-AGSRLRAAAAAAHDQEAAAPTGR-RWRRRPGPSPPLQPRSR 135
Query: 72 SAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRP---HSRFPG 116
PR A PP G+ R +SR R P SR PG
Sbjct: 136 HPHTRYPRAVPEATPLRPPPGTRP---RAKSRPGCRSSPFPARSRTPG 180
Score = 31.2 bits (69), Expect = 0.73
Identities = 36/108 (33%), Positives = 40/108 (37%), Gaps = 22/108 (20%)
Query: 6 TERRRRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVA 65
T RR R R GPS P P SR P A R PR
Sbjct: 116 TGRRWRRRPGPSPP-------------LQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAK 162
Query: 66 LGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSR 113
P RS+P P S+T +A PPRG RP R+ RP H R
Sbjct: 163 SRPGCRSSPF--PARSRTPGEAGPPRGDP----RP---RAPRPGDHPR 201
>gi|239756892 PREDICTED: hypothetical protein [Homo sapiens]
Length = 576
Score = 34.7 bits (78), Expect = 0.066
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 24/112 (21%)
Query: 31 AAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRSAPAANP------------ 78
AA G++ P S RRR G R + P P +R+AP A P
Sbjct: 261 AALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARPDAAGEQCPRPAG 320
Query: 79 -RLSQTAAQAHPPRGSTSV---------YLRPRSRRSVRPRPHSRFPGPSHS 120
R Q + P GS S Y RP+S S P SR P S++
Sbjct: 321 ARPRQAEIETDPETGSDSFSTWTSYEFNYARPKSHSS--PLSTSRDPKSSYT 370
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 34.7 bits (78), Expect = 0.066
Identities = 44/128 (34%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 10 RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFP-PSARRRTGRARFRNFVSPRVALGP 68
RR P G RG+G AA+ + R S P PS R AR R + R G
Sbjct: 172 RRSDVQPQERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGR---SAARRRRRLRRRRRRG- 227
Query: 69 LQRSAPAANPRLS------QTAAQ--AHPPRGSTSVYLRPR-----SRRSVRPRPHSRFP 115
+R+A AA L Q AAQ A P + + RPR SR RPRPH P
Sbjct: 228 -ERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASP 286
Query: 116 GPSHSAAK 123
P A +
Sbjct: 287 APGDGALR 294
>gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo
sapiens]
Length = 404
Score = 34.7 bits (78), Expect = 0.066
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 24/112 (21%)
Query: 31 AAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRSAPAANP------------ 78
AA G++ P S RRR G R + P P +R+AP A P
Sbjct: 261 AALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARPDAAGEQCPRPAG 320
Query: 79 -RLSQTAAQAHPPRGSTSV---------YLRPRSRRSVRPRPHSRFPGPSHS 120
R Q + P GS S Y RP+S S P SR P S++
Sbjct: 321 ARPRQAEIETDPETGSDSFSTWTSYEFNYARPKSHSS--PLSTSRDPKSSYT 370
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 34.7 bits (78), Expect = 0.066
Identities = 44/128 (34%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 10 RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFP-PSARRRTGRARFRNFVSPRVALGP 68
RR P G RG+G AA+ + R S P PS R AR R + R G
Sbjct: 172 RRSDVQPQERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGR---SAARRRRRLRRRRRRG- 227
Query: 69 LQRSAPAANPRLS------QTAAQ--AHPPRGSTSVYLRPR-----SRRSVRPRPHSRFP 115
+R+A AA L Q AAQ A P + + RPR SR RPRPH P
Sbjct: 228 -ERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASP 286
Query: 116 GPSHSAAK 123
P A +
Sbjct: 287 APGDGALR 294
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 34.7 bits (78), Expect = 0.066
Identities = 42/136 (30%), Positives = 53/136 (38%), Gaps = 18/136 (13%)
Query: 5 ATERRRRPRAGPS-LPRGAARGKGALPAAASPTSRGSSNFPPSARRRT-----GRARFRN 58
AT PRAGP+ R A G+G A TS G + P A T G+ R
Sbjct: 68 ATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRI 127
Query: 59 FVSPRVALGPL----QRSAPAANPRLSQTA--------AQAHPPRGSTSVYLRPRSRRSV 106
VA G +RSA +A R + A A R + + PR S
Sbjct: 128 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 187
Query: 107 RPRPHSRFPGPSHSAA 122
RPRP + P S S+A
Sbjct: 188 RPRPPTEGPRKSVSSA 203
>gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo
sapiens]
Length = 404
Score = 34.7 bits (78), Expect = 0.066
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 24/112 (21%)
Query: 31 AAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRSAPAANP------------ 78
AA G++ P S RRR G R + P P +R+AP A P
Sbjct: 261 AALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARPDAAGEQCPRPAG 320
Query: 79 -RLSQTAAQAHPPRGSTSV---------YLRPRSRRSVRPRPHSRFPGPSHS 120
R Q + P GS S Y RP+S S P SR P S++
Sbjct: 321 ARPRQAEIETDPETGSDSFSTWTSYEFNYARPKSHSS--PLSTSRDPKSSYT 370
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 34.7 bits (78), Expect = 0.066
Identities = 44/128 (34%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 10 RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFP-PSARRRTGRARFRNFVSPRVALGP 68
RR P G RG+G AA+ + R S P PS R AR R + R G
Sbjct: 172 RRSDVQPQERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGR---SAARRRRRLRRRRRRG- 227
Query: 69 LQRSAPAANPRLS------QTAAQ--AHPPRGSTSVYLRPR-----SRRSVRPRPHSRFP 115
+R+A AA L Q AAQ A P + + RPR SR RPRPH P
Sbjct: 228 -ERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASP 286
Query: 116 GPSHSAAK 123
P A +
Sbjct: 287 APGDGALR 294
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 34.3 bits (77), Expect = 0.086
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 27 GALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPLQRSAPAANPRLSQTAAQ 86
GALP A S T+ + PPS+R RT + R V P + + P +AP+ P L A
Sbjct: 1002 GALPLAPSSTAHSQTTPPPSSRPRTTASVPRTTVWPVLTVPP---TAPSPAPSL---VAS 1055
Query: 87 AHPPRGST 94
A GST
Sbjct: 1056 AFGESGST 1063
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 34.3 bits (77), Expect = 0.086
Identities = 34/119 (28%), Positives = 44/119 (36%), Gaps = 20/119 (16%)
Query: 13 RAGPSLPRGA--------ARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRV 64
RAG PRGA A G+G +RG FP + G AR R SP
Sbjct: 73 RAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG-ARSRGCHSPSC 131
Query: 65 ALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAK 123
RS+ A R Q + PR S ++ + + PRP P H A+
Sbjct: 132 C-----RSSSCAWHRWPQLRGREADPRASPALLI------CIAPRPRPALPAALHIGAR 179
>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 34.3 bits (77), Expect = 0.086
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 23/117 (19%)
Query: 10 RRPRAGPSLPRGAARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRVALGPL 69
RRP P P+GAA G + P AA+P + PP+ R P L
Sbjct: 103 RRPGKPPRRPKGAA-GHPSAPPAAAPAAPAQ---PPAPR-------------PESQLSDR 145
Query: 70 QRS---APAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAK 123
+S P R +++A A PP G + + R R RPR + G +H ++
Sbjct: 146 PQSWEQKPRGPGRSARSAGAAAPPAGGLA---QARQARRRRPRAAAALTGRTHQRSR 199
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 34.3 bits (77), Expect = 0.086
Identities = 34/119 (28%), Positives = 44/119 (36%), Gaps = 20/119 (16%)
Query: 13 RAGPSLPRGA--------ARGKGALPAAASPTSRGSSNFPPSARRRTGRARFRNFVSPRV 64
RAG PRGA A G+G +RG FP + G AR R SP
Sbjct: 73 RAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRG-ARSRGCHSPSC 131
Query: 65 ALGPLQRSAPAANPRLSQTAAQAHPPRGSTSVYLRPRSRRSVRPRPHSRFPGPSHSAAK 123
RS+ A R Q + PR S ++ + + PRP P H A+
Sbjct: 132 C-----RSSSCAWHRWPQLRGREAEPRASPALLI------CIAPRPRPALPAALHIGAR 179
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.134 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,525,217
Number of Sequences: 37866
Number of extensions: 574649
Number of successful extensions: 3389
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 295
Number of HSP's that attempted gapping in prelim test: 3127
Number of HSP's gapped (non-prelim): 532
length of query: 221
length of database: 18,247,518
effective HSP length: 98
effective length of query: 123
effective length of database: 14,536,650
effective search space: 1788007950
effective search space used: 1788007950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.