Search of human proteins with 116812567

Search of human proteins with 116812567

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|116812567 RAB25 [Homo sapiens]
         (213 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|116812567 RAB25 [Homo sapiens]                                     417   e-117
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                 255   2e-68
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        247   5e-66
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           174   7e-44
gi|19923483 GTPase Rab14 [Homo sapiens]                               172   1e-43
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]         171   6e-43
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    168   4e-42
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]          166   1e-41
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           165   2e-41
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          164   7e-41
gi|16933567 mel transforming oncogene [Homo sapiens]                  162   2e-40
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]         161   3e-40
gi|50234889 RAB43 protein [Homo sapiens]                              159   1e-39
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          159   1e-39
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa...   157   8e-39
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa...   157   8e-39
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           157   8e-39
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   155   2e-38
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   155   2e-38
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            155   2e-38
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            155   2e-38
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      155   3e-38
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]          154   7e-38
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           153   9e-38
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]           153   9e-38
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]           152   3e-37
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]          151   5e-37
gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]          149   2e-36
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]          148   3e-36
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...   148   4e-36

>gi|116812567 RAB25 [Homo sapiens]
          Length = 213

 Score =  417 bits (1073), Expect = e-117
 Identities = 213/213 (100%), Positives = 213/213 (100%)

Query: 1   MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
           MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA
Sbjct: 1   MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60

Query: 61  VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
           VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV
Sbjct: 61  VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120

Query: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
           MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180

Query: 181 RQNSIRTNAITLGSAQAGQEPGPGEKRACCISL 213
           RQNSIRTNAITLGSAQAGQEPGPGEKRACCISL
Sbjct: 181 RQNSIRTNAITLGSAQAGQEPGPGEKRACCISL 213


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score =  255 bits (652), Expect = 2e-68
 Identities = 127/186 (68%), Positives = 156/186 (83%), Gaps = 1/186 (0%)

Query: 4   GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
           GT +D Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +    +K
Sbjct: 2   GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61

Query: 63  AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
           AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY  VERWLKEL DHA++ IV+ML
Sbjct: 62  AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121

Query: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQ 182
           VGNKSDL   R VPT+EAR FAE NGL F+ETSALDSTNVE AF+T+L EI+  VS+++ 
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181

Query: 183 NSIRTN 188
           +  R N
Sbjct: 182 SDRREN 187


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  247 bits (631), Expect = 5e-66
 Identities = 133/220 (60%), Positives = 165/220 (75%), Gaps = 13/220 (5%)

Query: 4   GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
           GT +D Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +    +K
Sbjct: 2   GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61

Query: 63  AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
           AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY  VERWLKEL DHA++ IV+ML
Sbjct: 62  AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121

Query: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR- 181
           VGNKSDL   R VPT+EAR FAE N L F+ETSALDSTNVE AF+ +L EI+  VS+++ 
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181

Query: 182 ------QNSIRTNA--ITLGSAQAGQEPGPGEKRACCISL 213
                   S   N   I++     GQ+P    K  CC +L
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKP---NKLQCCQNL 218


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  174 bits (440), Expect = 7e-44
 Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 18/215 (8%)

Query: 9   YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 68
           Y ++FK ++IG++GVGK+ LL +FT   F      TIGVEF  R + +    +K QIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62

Query: 69  AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 128
           AG E +R+IT +YYRGA GALLV+D+T+  T+  +  WL++   H+ + +V+ML+GNKSD
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122

Query: 129 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSK------QRQ 182
           L   REV  EE   FA  +GL+F+ETSA  ++NVE AF    KEI+ K+ +         
Sbjct: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182

Query: 183 NSIR-------TNAITLGSAQAGQEPGPGEKRACC 210
           N I+       TNA   G+ Q GQ+ G G    CC
Sbjct: 183 NGIKIGPQHAATNATHAGN-QGGQQAGGG----CC 212


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  172 bits (437), Expect = 1e-43
 Identities = 87/196 (44%), Positives = 126/196 (64%), Gaps = 8/196 (4%)

Query: 8   DYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD 67
           +Y+++FK ++IG+ GVGK+ LL +FT  +F  D   TIGVEF TR + +    +K QIWD
Sbjct: 7   NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66

Query: 68  TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKS 127
           TAG ER+RA+T +YYRGA GAL+V+D+T+  TY  +  WL +  +      V++L+GNK+
Sbjct: 67  TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126

Query: 128 DLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRT 187
           DL   R+V  EEA+ FAE NGLLFLE SA    NVE AF    K+I+         +I+ 
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIY--------QNIQD 178

Query: 188 NAITLGSAQAGQEPGP 203
            ++ L +A++G +  P
Sbjct: 179 GSLDLNAAESGVQHKP 194


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score =  171 bits (432), Expect = 6e-43
 Identities = 95/203 (46%), Positives = 122/203 (60%), Gaps = 1/203 (0%)

Query: 7   EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 66
           E Y+F+FK ++IG +G GK+ LL +F  N+F  DS  TIGVEF +R V +G   VK QIW
Sbjct: 3   ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62

Query: 67  DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 126
           DTAG ER+R++T +YYRGA GALLV+D+T  +TY  +  WL +    A   IVV+L GNK
Sbjct: 63  DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122

Query: 127 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIR 186
            DL   REV   EA  FA+ N L+FLETSAL   NVE AF    + I  K+     +  R
Sbjct: 123 KDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPER 182

Query: 187 T-NAITLGSAQAGQEPGPGEKRA 208
             + I  G A   Q   P   +A
Sbjct: 183 MGSGIQYGDASLRQLRQPRSAQA 205


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  168 bits (425), Expect = 4e-42
 Identities = 81/171 (47%), Positives = 115/171 (67%)

Query: 9   YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 68
           Y ++FK ++IG++GVGK+ LL +FT   F      TIGVEF  R V +    +K QIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62

Query: 69  AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 128
           AG E +R+IT +YYRGA GALLV+D+T+ +T+  +  WL++   H+ + +V+ML+GNKSD
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122

Query: 129 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSK 179
           L   R+V  EE   FA  +GL+F+ETSA  + NVE AF    KEI+ K+ +
Sbjct: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 173


>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  166 bits (421), Expect = 1e-41
 Identities = 91/203 (44%), Positives = 122/203 (60%), Gaps = 1/203 (0%)

Query: 7   EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 66
           E Y+F+FK ++IG +G GK+ LL +F   +F  DS  TIGVEF ++ + +G   VK QIW
Sbjct: 8   ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIW 67

Query: 67  DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 126
           DTAG ER+R++T +YYRGA GALLV+D+T  +TY  +  WL +    A   IV++L GNK
Sbjct: 68  DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNK 127

Query: 127 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIR 186
            DL   REV   EA  FA+ N L+FLETSAL   NVE AF    ++I  K+     +  R
Sbjct: 128 KDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPER 187

Query: 187 T-NAITLGSAQAGQEPGPGEKRA 208
             + I  G A   Q   P   +A
Sbjct: 188 MGSGIQYGDAALRQLRSPRRAQA 210


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  165 bits (418), Expect = 2e-41
 Identities = 77/176 (43%), Positives = 123/176 (69%)

Query: 9   YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 68
           Y+++FK++LIG+SGVGKT LL RF+ + F+    +TIG++F  RT+ L    +K QIWDT
Sbjct: 5   YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64

Query: 69  AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 128
           AG ER+R IT+AYYRGA+G +LV+D+T  +++  ++ W++ + +HA + +  M++GNK D
Sbjct: 65  AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124

Query: 129 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNS 184
           ++  R+V  E     A + G+ FLETSA  S NVE AF T+ ++I  K++++  +S
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDS 180


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  164 bits (414), Expect = 7e-41
 Identities = 87/194 (44%), Positives = 129/194 (66%), Gaps = 13/194 (6%)

Query: 8   DYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD 67
           +Y+++FK++LIG+SGVGK+ LL RF  + ++    +TIGV+F  RT+ L    +K QIWD
Sbjct: 4   EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63

Query: 68  TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKS 127
           TAG ER+R ITS+YYRGA G ++V+D+T  ++YA V++WL+E+  +A   +  +LVGNKS
Sbjct: 64  TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123

Query: 128 DLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRT 187
           DL+  + V    A+ FA++ G+ FLETSA ++TNVE AF T+  EI     K+R      
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGP--- 175

Query: 188 NAITLGSAQAGQEP 201
                G+A  G+ P
Sbjct: 176 -----GAASGGERP 184


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  162 bits (410), Expect = 2e-40
 Identities = 76/176 (43%), Positives = 122/176 (69%)

Query: 9   YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 68
           Y+++FK++LIG+SGVGKT +L RF+ + F+    +TIG++F  RT+ L    +K QIWDT
Sbjct: 5   YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64

Query: 69  AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 128
           AG ER+R IT+AYYRGA+G +LV+D+T  +++  +  W++ + +HA A +  M++GNK D
Sbjct: 65  AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124

Query: 129 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNS 184
           ++  R+V  E     A + G+ F+ETSA  + NVE AF T+ ++I AK+ K+ + +
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180


>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  161 bits (408), Expect = 3e-40
 Identities = 81/205 (39%), Positives = 124/205 (60%), Gaps = 1/205 (0%)

Query: 6   EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
           +E+++++FK++LIG+S VGKT ++  F    ++   + TIGV+F+ R++ +    VK Q+
Sbjct: 11  DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70

Query: 66  WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
           WDTAG ER+R IT +YYR A  A++ +DLT+  T+  +  W+ E+  +  A +V+ML+GN
Sbjct: 71  WDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGN 130

Query: 126 KSDLSQAREVPTEEARMFAENNGLL-FLETSALDSTNVELAFETVLKEIFAKVSKQRQNS 184
           K DL + R V  E+A   AE  GLL  LETSA +S N+E  F  + KE+ A+ S      
Sbjct: 131 KCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGE 190

Query: 185 IRTNAITLGSAQAGQEPGPGEKRAC 209
              N + L S+      GP EK  C
Sbjct: 191 SALNGLPLDSSPVLMAQGPSEKTHC 215


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  159 bits (403), Expect = 1e-39
 Identities = 86/200 (43%), Positives = 127/200 (63%), Gaps = 1/200 (0%)

Query: 6   EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
           +E Y+F+FK+VL+G++ VGKT ++ RF    FS    +TIGV+F+ +T+ +    VK QI
Sbjct: 12  DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQI 71

Query: 66  WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
           WDTAG ER+R IT +YYR A GA+L +D+TK  ++  V  W++++  +A + IV +L+GN
Sbjct: 72  WDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGN 131

Query: 126 KSDLSQAREVPTEEARMFAENNGLL-FLETSALDSTNVELAFETVLKEIFAKVSKQRQNS 184
           KSDLS+ REV   EA+  AE+  +L  +ETSA DS+NVE AF  V  E+  +      + 
Sbjct: 132 KSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLFSE 191

Query: 185 IRTNAITLGSAQAGQEPGPG 204
              + I L S   G+  G G
Sbjct: 192 KSPDHIQLNSKDIGEGWGCG 211


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  159 bits (403), Expect = 1e-39
 Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 17/209 (8%)

Query: 7   EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 66
           EDY+F+FK+VLIG +GVGKT L+ RFT+  F      TIGV+F  +TV +    VK QIW
Sbjct: 4   EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63

Query: 67  DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 126
           DTAG ER+R+IT +YYR A   +L +D+T  +++  +  WL+E+  +A   ++ +LVGNK
Sbjct: 64  DTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNK 123

Query: 127 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIR 186
            DL++ REV  + A  F+E   + +LETSA +S NVE  F  +   +   +S+ RQN++ 
Sbjct: 124 IDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL---ISEARQNTLV 180

Query: 187 TNAITLGSAQAGQEPGPGEKRA-----CC 210
            N            P PGE ++     CC
Sbjct: 181 NNV---------SSPLPGEGKSISYLTCC 200


>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
           sapiens]
          Length = 216

 Score =  157 bits (396), Expect = 8e-39
 Identities = 84/201 (41%), Positives = 118/201 (58%), Gaps = 11/201 (5%)

Query: 13  FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 72
           FK+VL+GES VGK++L+ RF + +F     +TIG  F T+TV L    VK +IWDTAG E
Sbjct: 22  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81

Query: 73  RYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQA 132
           RY ++   YYRGA  A++V+D+T   T+A  + W+KEL   A   IV+ L GNK+DL+  
Sbjct: 82  RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141

Query: 133 REVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRTNAITL 192
           R V  +EA+ +A++N LLF+ETSA  + NV         EIF  ++K+   +   NA   
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNV--------NEIFMAIAKKLPKNEPQNATGA 193

Query: 193 GSAQAG---QEPGPGEKRACC 210
                G   QE  P  +  CC
Sbjct: 194 PGRNRGVDLQENNPASRSQCC 214


>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
           sapiens]
          Length = 216

 Score =  157 bits (396), Expect = 8e-39
 Identities = 84/201 (41%), Positives = 118/201 (58%), Gaps = 11/201 (5%)

Query: 13  FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 72
           FK+VL+GES VGK++L+ RF + +F     +TIG  F T+TV L    VK +IWDTAG E
Sbjct: 22  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81

Query: 73  RYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQA 132
           RY ++   YYRGA  A++V+D+T   T+A  + W+KEL   A   IV+ L GNK+DL+  
Sbjct: 82  RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141

Query: 133 REVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRTNAITL 192
           R V  +EA+ +A++N LLF+ETSA  + NV         EIF  ++K+   +   NA   
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNV--------NEIFMAIAKKLPKNEPQNATGA 193

Query: 193 GSAQAG---QEPGPGEKRACC 210
                G   QE  P  +  CC
Sbjct: 194 PGRNRGVDLQENNPASRSQCC 214


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  157 bits (396), Expect = 8e-39
 Identities = 73/176 (41%), Positives = 119/176 (67%)

Query: 9   YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 68
           Y+ +FK++LIG+SGVGKT L+ RF  + F++   +TIG++F  RTV +    +K Q+WDT
Sbjct: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64

Query: 69  AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 128
           AG ER++ IT+AYYRGA+G +LV+D+T  +++  ++ W+K + ++A A +  +L+GNK D
Sbjct: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124

Query: 129 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNS 184
           +   R+V  E+A   A  +G+ F ETSA  S NV+ AF ++ ++I  K   +R  +
Sbjct: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  155 bits (393), Expect = 2e-38
 Identities = 77/166 (46%), Positives = 118/166 (71%)

Query: 8   DYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD 67
           +Y+++FK++LIG+SGVGK+ LL RF  + ++    +TIGV+F  RT+ L    +K QIWD
Sbjct: 7   EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66

Query: 68  TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKS 127
           TAG ER+R ITS+YYRGA G ++V+D+T  +++  V++WL+E+  +A   +  +LVGNK 
Sbjct: 67  TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126

Query: 128 DLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
           DL+  + V    A+ FA++ G+ FLETSA ++TNVE +F T+  EI
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  155 bits (393), Expect = 2e-38
 Identities = 72/176 (40%), Positives = 118/176 (67%)

Query: 9   YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 68
           Y+ +FK++LIG+SGVGKT L+ RF  + F++   +TIG++F  RTV +    +K Q+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 69  AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 128
           AG ER++ IT+AYYRGA+G +L +D+T  +++  ++ W+K + ++A A +  +L+GNK D
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 129 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNS 184
           +   R+V  E+A   A  +G+ F ETSA  S NV+ AF ++ ++I  K   +R  +
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  155 bits (393), Expect = 2e-38
 Identities = 72/176 (40%), Positives = 118/176 (67%)

Query: 9   YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 68
           Y+ +FK++LIG+SGVGKT L+ RF  + F++   +TIG++F  RTV +    +K Q+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 69  AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 128
           AG ER++ IT+AYYRGA+G +L +D+T  +++  ++ W+K + ++A A +  +L+GNK D
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 129 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNS 184
           +   R+V  E+A   A  +G+ F ETSA  S NV+ AF ++ ++I  K   +R  +
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  155 bits (393), Expect = 2e-38
 Identities = 72/176 (40%), Positives = 118/176 (67%)

Query: 9   YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 68
           Y+ +FK++LIG+SGVGKT L+ RF  + F++   +TIG++F  RTV +    +K Q+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 69  AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 128
           AG ER++ IT+AYYRGA+G +L +D+T  +++  ++ W+K + ++A A +  +L+GNK D
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 129 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNS 184
           +   R+V  E+A   A  +G+ F ETSA  S NV+ AF ++ ++I  K   +R  +
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  155 bits (391), Expect = 3e-38
 Identities = 79/205 (38%), Positives = 124/205 (60%), Gaps = 7/205 (3%)

Query: 6   EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
           ++ Y+ +FK++LIG+SGVGKT +L RF+ + F+    +TIG++F  +TV L    +K QI
Sbjct: 3   KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62

Query: 66  WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
           WDTAG ER+  IT++YYRGA+G +LV+D+T  +++  + +WL+ + +HA   +  ML+GN
Sbjct: 63  WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122

Query: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSI 185
           K D+   R VP  +    A  +G+ F ETSA  + N+E AF T+ ++I  K   +  NS 
Sbjct: 123 KCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182

Query: 186 RTNAITLGSAQAGQEPGPGEKRACC 210
             +  + G          G K  CC
Sbjct: 183 NVDISSGGGV-------TGWKSKCC 200


>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score =  154 bits (388), Expect = 7e-38
 Identities = 84/200 (42%), Positives = 119/200 (59%), Gaps = 9/200 (4%)

Query: 13  FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 72
           FK+VL+GES VGK++L+ RF + +F     +TIG  F T+TV L    VK +IWDTAG E
Sbjct: 21  FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80

Query: 73  RYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQA 132
           RY ++   YYRGA  A++V+D+T  +++A  + W+KEL   A   IV+ L GNK+DL+  
Sbjct: 81  RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140

Query: 133 REVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR--QNSIRTNAI 190
           R V  +EA+ +A++N LLF+ETSA  S NV   F  + K++  K   Q    NS R   +
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL-PKNEPQNPGANSARGRGV 199

Query: 191 TLGSAQAGQEPGPGEKRACC 210
            L       EP    +  CC
Sbjct: 200 DL------TEPTQPTRNQCC 213


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  153 bits (387), Expect = 9e-38
 Identities = 82/185 (44%), Positives = 118/185 (63%), Gaps = 8/185 (4%)

Query: 8   DYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD 67
           DY+ +FK+++IG+SGVGK++LL RF  N FS    TTIGV+F  RTV +    VK QIWD
Sbjct: 4   DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63

Query: 68  TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKS 127
           TAG ER+R ITS YYRG  G ++V+D+T  +++  V+RWL E+  + +  +  +LVGNK+
Sbjct: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKN 122

Query: 128 DLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL-------KEIFAKVSKQ 180
           D  + + V TE+A  FA   G+   ETSA ++ NVE  F  +        K+  AK  +Q
Sbjct: 123 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQ 182

Query: 181 RQNSI 185
           +QN +
Sbjct: 183 QQNDV 187


>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  153 bits (387), Expect = 9e-38
 Identities = 77/208 (37%), Positives = 125/208 (60%), Gaps = 1/208 (0%)

Query: 3   NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
           +  +++++++FK++LIG S VGKT+ L R+  + F+    +T+G++F  +TV      +K
Sbjct: 13  DAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIK 72

Query: 63  AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
            QIWDTAG ERYR IT+AYYRGA+G LL++D+   +++A V+ W  ++  ++     V+L
Sbjct: 73  LQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVIL 132

Query: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQ 182
           VGNK DL   R VP E+ R  A++ G  F E SA ++ NV+  FE ++  I  K+++  +
Sbjct: 133 VGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESLE 192

Query: 183 NSIRTNAITLGSAQAGQEPGPGEKRACC 210
            S  + +   G A  G  P P      C
Sbjct: 193 PSSSSGSNGKGPA-VGDAPAPQPSSCSC 219


>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score =  152 bits (383), Expect = 3e-37
 Identities = 74/161 (45%), Positives = 108/161 (67%)

Query: 13  FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 72
           FK+VL+GES VGK++L+ RF + +F     +TIG  F T++V L    VK +IWDTAG E
Sbjct: 21  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80

Query: 73  RYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQA 132
           RY ++   YYRGA  A++V+D+T  +T+A  + W+KEL   A  +IV+ L GNK+DL+  
Sbjct: 81  RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140

Query: 133 REVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
           R V  EEA+ +A++N LLF+ETSA  + NV   F  + K++
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181


>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  151 bits (381), Expect = 5e-37
 Identities = 75/194 (38%), Positives = 127/194 (65%), Gaps = 4/194 (2%)

Query: 3   NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
           + ++++++++FK+++IG S VGKT+ L R+  + F+    +T+G++F  +TV      VK
Sbjct: 13  DASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVK 72

Query: 63  AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
            QIWDTAG ERYR IT+AYYRGA+G +L++D+T  +++  V+ W  ++  ++     V+L
Sbjct: 73  LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVIL 132

Query: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQ 182
           VGNK D+ + R VPTE+ ++ AE  G  F E SA ++ +V  AFE ++  I  K+S    
Sbjct: 133 VGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMS---- 188

Query: 183 NSIRTNAITLGSAQ 196
           +S+ T+   LGS++
Sbjct: 189 DSLDTDPSMLGSSK 202


>gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]
          Length = 195

 Score =  149 bits (376), Expect = 2e-36
 Identities = 67/160 (41%), Positives = 109/160 (68%)

Query: 14  KVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 73
           KV L+G++GVGK++++ RF ++ F H+   TIG  F T+TV  G    K  IWDTAG ER
Sbjct: 8   KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67

Query: 74  YRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAR 133
           + ++   YYRG+  A++V+D+TK  ++  +++W+KEL +H    IV+ + GNK DLS  R
Sbjct: 68  FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127

Query: 134 EVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
           EVP ++A+ +AE+ G + +ETSA ++ N+E  F+ + ++I
Sbjct: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167


>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
          Length = 227

 Score =  148 bits (374), Expect = 3e-36
 Identities = 73/207 (35%), Positives = 121/207 (58%)

Query: 3   NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
           + ++++++++FK+++IG S VGKT+ L R+  + F+    +T+G++F  +TV      +K
Sbjct: 21  DSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIK 80

Query: 63  AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
            QIWDTAG ERYR IT+AYYRGA+G +L++D+T  +++  V+ W  ++  ++     V+L
Sbjct: 81  LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVIL 140

Query: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQ 182
           VGNK D+   R + TE  +   E  G  F ETSA D+ NV+  FE ++  I  K+S+  +
Sbjct: 141 VGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLE 200

Query: 183 NSIRTNAITLGSAQAGQEPGPGEKRAC 209
                 A    +      P P    AC
Sbjct: 201 TDPAITAAKQNTRLKETPPPPQPNCAC 227


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score =  148 bits (373), Expect = 4e-36
 Identities = 73/180 (40%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 2   GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDS-RTTIGVEFSTRTVMLGTAA 60
           G G + + + + K +L+G+SGVGKT+LL +F + +F   S   T+G+ F+ + V +    
Sbjct: 12  GAGPDFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVR 71

Query: 61  VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
           VK QIWDTAG ER+R++T AYYR A   LL++D+T   ++  +  WL E++++A+  +V+
Sbjct: 72  VKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVI 131

Query: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
           ML+GNK+D+S  R + +E+    A   G+ FLETSA    NVELAF  + KE+  +   Q
Sbjct: 132 MLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQ 191


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.131    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,651,380
Number of Sequences: 37866
Number of extensions: 222991
Number of successful extensions: 1194
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 835
Number of HSP's gapped (non-prelim): 272
length of query: 213
length of database: 18,247,518
effective HSP length: 98
effective length of query: 115
effective length of database: 14,536,650
effective search space: 1671714750
effective search space used: 1671714750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.