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Search of human proteins with 116805340
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116805340 glycyl-tRNA synthetase [Homo sapiens]
(739 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116805340 glycyl-tRNA synthetase [Homo sapiens] 1477 0.0
gi|34303926 prolyl-tRNA synthetase (mitochondrial)(putative) [Ho... 40 0.010
gi|62241042 glutamyl-prolyl tRNA synthetase [Homo sapiens] 37 0.086
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 35 0.19
gi|20070344 threonyl-tRNA synthetase 2, mitochondrial [Homo sapi... 35 0.33
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 35 0.33
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 35 0.33
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 35 0.33
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 35 0.33
gi|120587019 zinc finger protein 318 [Homo sapiens] 34 0.56
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 33 0.73
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 33 0.73
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 33 0.73
gi|149274648 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like [Hom... 33 0.73
gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8... 33 1.2
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 33 1.2
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 33 1.2
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 32 1.6
gi|150418007 RAN binding protein 2 [Homo sapiens] 32 1.6
gi|145699133 KPL2 protein isoform 1 [Homo sapiens] 32 2.1
gi|47132519 Ras association and pleckstrin homology domains 1 is... 32 2.1
gi|83267877 RANBP2-like and GRIP domain containing 5 isoform 1 [... 32 2.8
gi|14149991 RANBP2-like and GRIP domain containing 5 isoform 2 [... 32 2.8
gi|118197270 RANBP2-like and GRIP domain containing 7 [Homo sapi... 32 2.8
gi|182765478 RANBP2-like and GRIP domain containing 6 [Homo sapi... 32 2.8
gi|148664230 ankyrin repeat and LEM domain containing 2 [Homo sa... 32 2.8
gi|41872673 NIMA-related kinase 1 [Homo sapiens] 31 3.6
gi|122937219 F-box protein 41 [Homo sapiens] 31 3.6
gi|22749497 hypothetical protein LOC254158 [Homo sapiens] 31 3.6
gi|58530840 desmoplakin isoform I [Homo sapiens] 31 4.7
>gi|116805340 glycyl-tRNA synthetase [Homo sapiens]
Length = 739
Score = 1477 bits (3823), Expect = 0.0
Identities = 739/739 (100%), Positives = 739/739 (100%)
Query: 1 MPSPRPVLLRGARAALLLLLPPRLLARPSLLLRRSLSAASCPPISLPAAASRSSMDGAGA 60
MPSPRPVLLRGARAALLLLLPPRLLARPSLLLRRSLSAASCPPISLPAAASRSSMDGAGA
Sbjct: 1 MPSPRPVLLRGARAALLLLLPPRLLARPSLLLRRSLSAASCPPISLPAAASRSSMDGAGA 60
Query: 61 EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIVD 120
EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIVD
Sbjct: 61 EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIVD 120
Query: 121 RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC 180
RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC
Sbjct: 121 RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC 180
Query: 181 TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEME 240
TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEME
Sbjct: 181 TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEME 240
Query: 241 SVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPET 300
SVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPET
Sbjct: 241 SVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPET 300
Query: 301 AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK 360
AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK
Sbjct: 301 AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK 360
Query: 361 DHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKV 420
DHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKV
Sbjct: 361 DHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKV 420
Query: 421 GISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPL 480
GISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPL
Sbjct: 421 GISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPL 480
Query: 481 VAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLLNEKGEF 540
VAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLLNEKGEF
Sbjct: 481 VAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLLNEKGEF 540
Query: 541 TIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDE 600
TIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDE
Sbjct: 541 TIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDE 600
Query: 601 QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYAR 660
QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYAR
Sbjct: 601 QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYAR 660
Query: 661 TDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNITWADVE 720
TDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNITWADVE
Sbjct: 661 TDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNITWADVE 720
Query: 721 ARYPLFEGQETGKKETIEE 739
ARYPLFEGQETGKKETIEE
Sbjct: 721 ARYPLFEGQETGKKETIEE 739
>gi|34303926 prolyl-tRNA synthetase (mitochondrial)(putative) [Homo
sapiens]
Length = 475
Score = 39.7 bits (91), Expect = 0.010
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 318 KLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYS 377
+LPF Q+ FR+E PR GL+R REF M ++ F E + V D + L++
Sbjct: 176 QLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFN 235
>gi|62241042 glutamyl-prolyl tRNA synthetase [Homo sapiens]
Length = 1512
Score = 36.6 bits (83), Expect = 0.086
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 42 PPISLPAAASRS-SMDGAGAEEVLAPLRL-AVRQQGDLVRKLKEDKAPQVDVDKAVAEL 98
PP+S + +S + + + AG E A + V QG++VRKLK +KAP+ VD AV EL
Sbjct: 877 PPLSQSSDSSPTRNSEPAGLETPEAKVLFDKVASQGEVVRKLKTEKAPKDQVDIAVQEL 935
Score = 36.2 bits (82), Expect = 0.11
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 71 VRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAK 108
V QGD+VR+LK KAP+ DVD AV +L + K + K
Sbjct: 757 VAVQGDVVRELKAKKAPKEDVDAAVKQLLSLKAEYKEK 794
Score = 31.6 bits (70), Expect = 2.8
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 71 VRQQGDLVRKLKEDKAPQVDVDKAV---AELKARKRVLEAKE 109
V QG++VRKLK +K+P+ +++AV LKA+ + KE
Sbjct: 830 VAAQGEVVRKLKAEKSPKAKINEAVECLLSLKAQYKEKTGKE 871
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 35.4 bits (80), Expect = 0.19
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 22/233 (9%)
Query: 33 RRSLSAASCPPISLPAAASRSSMDGAGA--EEVLAPLRLAVRQQGDLVRKLKEDKAPQVD 90
+R+L+ AS + + + ++ A +EV+ LR Q D R+L+E +A + +
Sbjct: 1611 QRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQMKDYQRELEEARASRDE 1670
Query: 91 VDKAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDF 150
+ E + + + LEA+ L LQ + +RA+ +R D+ G S L D
Sbjct: 1671 IFAQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEITNSASGKSALLD- 1729
Query: 151 GPVGCALKNNIIQTWRQHFIQEEQILEIDCTM-LTPEPVLKTSGHVDKF--------ADF 201
L+ I Q EE++ E M L + KT+ VD +
Sbjct: 1730 --EKRRLEARIAQL-------EEELEEEQSNMELLNDRFRKTTLQVDTLNAELAAERSAA 1780
Query: 202 MVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKK-SEMESVLAQLDNYGQQE 253
D + R + LKA LQ+L K + S +E+ + QL+ +QE
Sbjct: 1781 QKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQE 1833
>gi|20070344 threonyl-tRNA synthetase 2, mitochondrial [Homo
sapiens]
Length = 718
Score = 34.7 bits (78), Expect = 0.33
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 607 FPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSG-SIGRRYARTDEIG 665
+P ++PF+ V+P+ QE + KE ++L G+ +D SG ++ RR R
Sbjct: 607 WPLWLSPFQVVVIPVGSEQE--EYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAH 664
Query: 666 VAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNITWAD 718
F + +K T +R RD+ R ++ E + +L N + A+
Sbjct: 665 YNFQFVVGQKEQSK--RTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVPNAE 715
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 34.7 bits (78), Expect = 0.33
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 33 RRSLSAASCPPISLPAAASRSSMDGA--GAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVD 90
+R+L+AA+ + D A G EE + LR Q D R+L++ +A + +
Sbjct: 1611 QRALAAAAKKKLEGDLKDLELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARASRDE 1670
Query: 91 VDKAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYD 149
+ E + + + LEA + LQ +RA+ + L++ ++ + G + L D
Sbjct: 1671 IFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELASSLSGRNALQD 1729
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 34.7 bits (78), Expect = 0.33
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 33 RRSLSAASCPPISLPAAASRSSMDGA--GAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVD 90
+R+L+AA+ + D A G EE + LR Q D R+L++ +A + +
Sbjct: 1618 QRALAAAAKKKLEGDLKDLELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARASRDE 1677
Query: 91 VDKAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYD 149
+ E + + + LEA + LQ +RA+ + L++ ++ + G + L D
Sbjct: 1678 IFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELASSLSGRNALQD 1736
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 34.7 bits (78), Expect = 0.33
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 33 RRSLSAASCPPISLPAAASRSSMDGA--GAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVD 90
+R+L+AA+ + D A G EE + LR Q D R+L++ +A + +
Sbjct: 1618 QRALAAAAKKKLEGDLKDLELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARASRDE 1677
Query: 91 VDKAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYD 149
+ E + + + LEA + LQ +RA+ + L++ ++ + G + L D
Sbjct: 1678 IFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELASSLSGRNALQD 1736
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 34.7 bits (78), Expect = 0.33
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 33 RRSLSAASCPPISLPAAASRSSMDGA--GAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVD 90
+R+L+AA+ + D A G EE + LR Q D R+L++ +A + +
Sbjct: 1611 QRALAAAAKKKLEGDLKDLELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARASRDE 1670
Query: 91 VDKAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYD 149
+ E + + + LEA + LQ +RA+ + L++ ++ + G + L D
Sbjct: 1671 IFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELASSLSGRNALQD 1729
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 33.9 bits (76), Expect = 0.56
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 616 CSVLPLSQNQEFMPFVKELSEALTRHGVS-----HKVDDSSGSIGRRYARTDEI 664
C + N E VKELSE + GVS H +DDS+ + G RY E+
Sbjct: 1770 CRESEIETNTELKERVKELSEGIVDEGVSTSIGPHSIDDSNLNHGNRYMWEGEV 1823
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 33.5 bits (75), Expect = 0.73
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 57 GAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKD 116
G G EE + LR Q +L R+++E + + ++ E + R + LEA+ L LQ +
Sbjct: 1662 GQGKEEAVKQLRKMQAQMKELWREVEETRTSREEIFSQNRESEKRLKGLEAEVLRLQEEL 1721
Query: 117 DIVDRAKME 125
DRA+ +
Sbjct: 1722 AASDRARRQ 1730
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 33.5 bits (75), Expect = 0.73
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 57 GAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKD 116
G G EE + LR Q +L R+++E + + ++ E + R + LEA+ L LQ +
Sbjct: 1654 GQGKEEAVKQLRKMQAQMKELWREVEETRTSREEIFSQNRESEKRLKGLEAEVLRLQEEL 1713
Query: 117 DIVDRAKME 125
DRA+ +
Sbjct: 1714 AASDRARRQ 1722
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 33.5 bits (75), Expect = 0.73
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 57 GAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKD 116
G G EE + LR Q +L R+++E + + ++ E + R + LEA+ L LQ +
Sbjct: 1695 GQGKEEAVKQLRKMQAQMKELWREVEETRTSREEIFSQNRESEKRLKGLEAEVLRLQEEL 1754
Query: 117 DIVDRAKME 125
DRA+ +
Sbjct: 1755 AASDRARRQ 1763
>gi|149274648 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like [Homo
sapiens]
Length = 1706
Score = 33.5 bits (75), Expect = 0.73
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 18/100 (18%)
Query: 162 IQTWRQHFIQEEQ--ILEIDCTMLTPEPVLK-TSGHVDKFADFMVKDV---KNGE----- 210
++T R+HF+++E+ I EI + + TS +D+F M+KD+ K+ +
Sbjct: 415 LRTTRRHFLRQEKSVIQEISLEKMPSVGFIPMTSAVIDEFVGDMMKDLPILKSDDPVVPS 474
Query: 211 CFR---ADHLLKAHLQKLMSDK----KCSVEKKSEMESVL 243
F+ +D LL H Q+L+SD KC V+++S VL
Sbjct: 475 LFKQKTSDELLHWHAQRLLSDDYDRIKCHVDEQSRDPHVL 514
>gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8
[Homo sapiens]
Length = 1765
Score = 32.7 bits (73), Expect = 1.2
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 25/153 (16%)
Query: 138 FAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDK 197
FAI V+G + +++ W I + +I+ L+PE + ++ K
Sbjct: 654 FAILDAVNGNIEDAVTAFESIKSVVSYWNLALIFHRKAEDIENDALSPEEQEECRNYLTK 713
Query: 198 FADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSV---EKKSEMESVLAQLDNY----- 249
D+++K + +G+ L KK V K + SV+ +L++Y
Sbjct: 714 TRDYLIKIIDDGD------------SNLSVVKKLPVPLESVKQMLNSVMQELEDYSEGGP 761
Query: 250 ----GQQELADLFVNYNVKSPITGNDLSPPVSF 278
G AD + ++ SP T LSP S+
Sbjct: 762 LYKNGSLRNADSEIKHSTPSP-TKYSLSPSKSY 793
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 32.7 bits (73), Expect = 1.2
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 31/210 (14%)
Query: 59 GAEEVLAPLRLAVRQQGD---LVRKLKEDKAPQVDVDKAVAELKARKRVLEA--KELALQ 113
GA E L L V+ Q + + RK KE + +++ EL+ + ++ +L +Q
Sbjct: 2177 GAVEAKPELSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQ 2236
Query: 114 PKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALK-NNIIQTWRQH---- 168
K+ ++E + + F D D +G A+K ++ + T QH
Sbjct: 2237 KKESTTRLQELEQ--ENKLFKD-------------DMEKLGLAIKESDAMSTQDQHVLFG 2281
Query: 169 -FIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMS 227
F Q Q E++ L E V K + D V + KN E R L+ ++ LMS
Sbjct: 2282 KFAQIIQEKEVEIDQLN-EQVTKLQQQLKITTDNKVIEEKN-ELIRD---LETQIECLMS 2336
Query: 228 DKKCSVEKKSEMESVLAQLDNYGQQELADL 257
D++C + E L ++ QQELA++
Sbjct: 2337 DQECVKRNREEEIEQLNEVIEKLQQELANI 2366
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 32.7 bits (73), Expect = 1.2
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 31/210 (14%)
Query: 59 GAEEVLAPLRLAVRQQGD---LVRKLKEDKAPQVDVDKAVAELKARKRVLEA--KELALQ 113
GA E L L V+ Q + + RK KE + +++ EL+ + ++ +L +Q
Sbjct: 2169 GAVEAKPELSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQ 2228
Query: 114 PKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALK-NNIIQTWRQH---- 168
K+ ++E + + F D D +G A+K ++ + T QH
Sbjct: 2229 KKESTTRLQELEQ--ENKLFKD-------------DMEKLGLAIKESDAMSTQDQHVLFG 2273
Query: 169 -FIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMS 227
F Q Q E++ L E V K + D V + KN E R L+ ++ LMS
Sbjct: 2274 KFAQIIQEKEVEIDQLN-EQVTKLQQQLKITTDNKVIEEKN-ELIRD---LETQIECLMS 2328
Query: 228 DKKCSVEKKSEMESVLAQLDNYGQQELADL 257
D++C + E L ++ QQELA++
Sbjct: 2329 DQECVKRNREEEIEQLNEVIEKLQQELANI 2358
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 32.3 bits (72), Expect = 1.6
Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 33 RRSLSAASCPPISLPAAASRSSMDGAGA--EEVLAPLRLAVRQQGDLVRKLKEDKAPQVD 90
+RS++ A+ + + + +D A +E + LR Q D +R+L + +A + +
Sbjct: 1604 QRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIKQLRKLQAQMKDCMRELDDTRASREE 1663
Query: 91 VDKAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQ 136
+ E + + + +EA+ + LQ + +RAK + +R D+
Sbjct: 1664 ILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADE 1709
>gi|150418007 RAN binding protein 2 [Homo sapiens]
Length = 3224
Score = 32.3 bits (72), Expect = 1.6
Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 25/159 (15%)
Query: 138 FAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDK 197
FAI V+G + +++ W I + +I+ L+PE + ++ K
Sbjct: 654 FAILDAVNGNIEDAVTAFESIKSVVSYWNLALIFHRKAEDIENDALSPEEQEECKNYLRK 713
Query: 198 FADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEME---SVLAQLDNY----- 249
D+++K + + + L KK V +S E SV+ +L++Y
Sbjct: 714 TRDYLIKIIDDSD------------SNLSVVKKLPVPLESVKEMLNSVMQELEDYSEGGP 761
Query: 250 ----GQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKT 284
G AD + ++ SP T LSP S+ KT
Sbjct: 762 LYKNGSLRNADSEIKHSTPSP-TRYSLSPSKSYKYSPKT 799
>gi|145699133 KPL2 protein isoform 1 [Homo sapiens]
Length = 1822
Score = 32.0 bits (71), Expect = 2.1
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 45 SLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAE-LKARKR 103
S+P+A SS D AEE P A R++ RKLK+D + D+ + E K
Sbjct: 1664 SIPSAEKTSSTDAGPAEEFPEPEENAAREE----RKLKDDTEKREQKDEEIPENANNEKM 1719
Query: 104 VLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCA--LKNNI 161
+E + + D + LK Y + F G + P+ A LK+
Sbjct: 1720 SMETLLKVFKGGSEAQDSNRFASHLKIENIYAEGFIKTFQDLGAKNLEPIEVAVLLKHPF 1779
Query: 162 IQ 163
IQ
Sbjct: 1780 IQ 1781
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 32.0 bits (71), Expect = 2.1
Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 13/128 (10%)
Query: 50 ASRSSMDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKE 109
++ SSMD ++V P L + QG + + ++ A+LKA K + ++
Sbjct: 214 SAASSMDSLDIDKVTRPQELDLTHQGQPITE-----------EEQAAKLKAEKIRVALEK 262
Query: 110 LALQPKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHF 169
+ +V R M D + D+ + + L D G +L ++++T +
Sbjct: 263 IKEAQVKKLVIRVHMSDDSSKTMMVDERQTVRQVLDNLMDKSHCGYSLDWSLVETVSE-- 320
Query: 170 IQEEQILE 177
+Q E+I E
Sbjct: 321 LQMERIFE 328
>gi|83267877 RANBP2-like and GRIP domain containing 5 isoform 1
[Homo sapiens]
Length = 1765
Score = 31.6 bits (70), Expect = 2.8
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 25/153 (16%)
Query: 138 FAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDK 197
FA+ V+G + +++ W I + +I+ L+PE + ++ K
Sbjct: 654 FAMLDAVNGNIEDAVTAFESIKSVVSYWNLALIFHRKAEDIENDALSPEEQEECRNYLTK 713
Query: 198 FADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSV---EKKSEMESVLAQLDNY----- 249
D+++K + +G+ L KK V K + SV+ +L++Y
Sbjct: 714 TRDYLIKIIDDGD------------SNLSVVKKLPVPLESVKQMLNSVMQELEDYSEGGP 761
Query: 250 ----GQQELADLFVNYNVKSPITGNDLSPPVSF 278
G AD + ++ SP T LSP S+
Sbjct: 762 LYKNGSLRNADSEIKHSTPSP-TKYSLSPSKSY 793
>gi|14149991 RANBP2-like and GRIP domain containing 5 isoform 2
[Homo sapiens]
Length = 904
Score = 31.6 bits (70), Expect = 2.8
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 25/153 (16%)
Query: 138 FAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDK 197
FA+ V+G + +++ W I + +I+ L+PE + ++ K
Sbjct: 654 FAMLDAVNGNIEDAVTAFESIKSVVSYWNLALIFHRKAEDIENDALSPEEQEECRNYLTK 713
Query: 198 FADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSV---EKKSEMESVLAQLDNY----- 249
D+++K + +G+ L KK V K + SV+ +L++Y
Sbjct: 714 TRDYLIKIIDDGD------------SNLSVVKKLPVPLESVKQMLNSVMQELEDYSEGGP 761
Query: 250 ----GQQELADLFVNYNVKSPITGNDLSPPVSF 278
G AD + ++ SP T LSP S+
Sbjct: 762 LYKNGSLRNADSEIKHSTPSP-TKYSLSPSKSY 793
>gi|118197270 RANBP2-like and GRIP domain containing 7 [Homo
sapiens]
Length = 904
Score = 31.6 bits (70), Expect = 2.8
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 25/153 (16%)
Query: 138 FAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDK 197
FA+ V+G + +++ W I + +I+ L+PE + ++ K
Sbjct: 654 FAMLDAVNGNIEDAVTAFESIKSVVSYWNLALIFHRKAEDIENDALSPEEQEECRNYLTK 713
Query: 198 FADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSV---EKKSEMESVLAQLDNY----- 249
D+++K + +G+ L KK V K + SV+ +L++Y
Sbjct: 714 TRDYLIKIIDDGD------------SNLSVVKKLPVPLESVKQMLNSVMQELEDYSEGGP 761
Query: 250 ----GQQELADLFVNYNVKSPITGNDLSPPVSF 278
G AD + ++ SP T LSP S+
Sbjct: 762 LYKNGSLRNADSEIKHSTPSP-TKYSLSPSKSY 793
>gi|182765478 RANBP2-like and GRIP domain containing 6 [Homo
sapiens]
Length = 1765
Score = 31.6 bits (70), Expect = 2.8
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 25/153 (16%)
Query: 138 FAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDK 197
FA+ V+G + +++ W I + +I+ L+PE + ++ K
Sbjct: 654 FAMLDAVNGNIEDAVTAFESIKSVVSYWNLALIFHRKAEDIENDALSPEEQEECRNYLTK 713
Query: 198 FADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSV---EKKSEMESVLAQLDNY----- 249
D+++K + +G+ L KK V K + SV+ +L++Y
Sbjct: 714 TRDYLIKIIDDGD------------SNLSVVKKLPVPLESVKQMLNSVMQELEDYSEGGP 761
Query: 250 ----GQQELADLFVNYNVKSPITGNDLSPPVSF 278
G AD + ++ SP T LSP S+
Sbjct: 762 LYKNGSLRNADSEIKHSTPSP-TKYSLSPSKSY 793
>gi|148664230 ankyrin repeat and LEM domain containing 2 [Homo
sapiens]
Length = 938
Score = 31.6 bits (70), Expect = 2.8
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 608 PAVVAPF---KCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRR--YARTD 662
P V F +CS PL Q + + + +R+G+ H ++ S G+R R +
Sbjct: 663 PPTVGAFGHTRCSAFPLEQEADLIEAAEPGGPHSSRNGLCHPLNHSRTLAGKRPKAPRGE 722
Query: 663 E--IGVAFGVTIDFD---------TVNKTPHTAT-LRDRDSMRQIRAEISEL--PSIVQD 708
E + +T++FD +V+KTP +T +D+ +I A +L PS
Sbjct: 723 EAHLPPVSDLTVEFDKLNLQNIGRSVSKTPDESTKTKDQILTSRINAVERDLLEPSPADQ 782
Query: 709 LANGN 713
L NG+
Sbjct: 783 LGNGH 787
>gi|41872673 NIMA-related kinase 1 [Homo sapiens]
Length = 1258
Score = 31.2 bits (69), Expect = 3.6
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 2 PSPRPVLLRGARAALL-LLLPPRLLARPSLLLRRSLSAASCPPISLPAAASRSSMDGAGA 60
PS +L +G A + L P+L+A L S + P PA+ ++S+ A
Sbjct: 247 PSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASG-QNSISVMPA 305
Query: 61 EEVLAP-----LRLAVRQQGDLVRKLKEDK----------APQVDVD-----KAVAELKA 100
+++ P + LA ++ GD +KL E K P+ V+ + ++E A
Sbjct: 306 QKITKPAAKYGIPLAYKKYGD--KKLHEKKPLQKHKQAHQTPEKRVNTGEERRKISEEAA 363
Query: 101 RKRVLEAKELALQPKDDIVDRAKMEDTLKRR 131
RKR LE E + KD I+ K E +KR+
Sbjct: 364 RKRRLEFIEKEKKQKDQIISLMKAEQ-MKRQ 393
>gi|122937219 F-box protein 41 [Homo sapiens]
Length = 936
Score = 31.2 bits (69), Expect = 3.6
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 8 LLRGARAALLLLLPPRLLARPSLLLRRSLSAASCPPISLPAAASRSSMDGAGAEEVLA 65
LL+ A LL+L R+ P++L RSL ASC +L A RS+ D G E + A
Sbjct: 712 LLKAAGGNLLIL---RISHCPNILTDRSLWLASCYCRALQAVTYRSATDPVGHEVIWA 766
>gi|22749497 hypothetical protein LOC254158 [Homo sapiens]
Length = 332
Score = 31.2 bits (69), Expect = 3.6
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 90 DVDKAVAELKARKRVLEAKELALQPK-DDIVDRAKMEDTLKRRFFYDQAFAIYGG 143
D K + E K + ++E + + + K DI+D M+D ++ R F+D+A A GG
Sbjct: 145 DACKLMGERKFHRIIMEDERIFPKSKVTDIMDVVTMQDYVQYRSFFDEAPAFSGG 199
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 30.8 bits (68), Expect = 4.7
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 23/202 (11%)
Query: 61 EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDK---AVAELKARKRVLEAK--ELALQPK 115
E+ L LR+ D R +E D+ + ++ EL+ +K+ +E + L
Sbjct: 1532 EQELTRLRI------DYERVSQERTVKDQDITRFQNSLKELQLQKQKVEEELNRLKRTAS 1585
Query: 116 DDIVDRAKMEDTLK--RRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEE 173
+D R K+E+ L+ RR +QA I L V ++++ Q Q + +
Sbjct: 1586 EDSCKRKKLEEELEGMRRSLKEQAIKITNLTQQLEQASIVKKRSEDDLRQ---QRDVLDG 1642
Query: 174 QILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSV 233
+ E T E + + S V+ ++++ E + HL H QK + DK S+
Sbjct: 1643 HLRE---KQRTQEELRRLSSEVEALRRQLLQEQ---ESVKQAHLRNEHFQKAIEDKSRSL 1696
Query: 234 -EKKSEMESVLAQLDNYGQQEL 254
E K E+E + + +N ++ L
Sbjct: 1697 NESKIEIERLQSLTENLTKEHL 1718
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,116,793
Number of Sequences: 37866
Number of extensions: 1200471
Number of successful extensions: 3287
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3249
Number of HSP's gapped (non-prelim): 65
length of query: 739
length of database: 18,247,518
effective HSP length: 110
effective length of query: 629
effective length of database: 14,082,258
effective search space: 8857740282
effective search space used: 8857740282
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.