Guide to the Human Genome
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Name: GARS Sequence: fasta or formatted (739aa) NCBI GI: 116805340
Description:

glycyl-tRNA synthetase

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         59           3
 C cysteine            1.8         13           1
 D aspartate           5.7         42           2
 E glutamate           7.7         57           2
 F phenylalanine       5.1         38           2
 G glycine             6.0         44           2
 H histidine           2.0         15           1
 I isoleucine          4.9         36           2
 K lysine              7.0         52           2
 L leucine             9.6         71           5
 M methionine          2.7         20           1
 N asparagine          3.4         25           2
 P proline             5.3         39           2
 Q glutamine           4.1         30           2
 R arginine            6.0         44           2
 S serine              5.8         43           2
 T threonine           4.5         33           1
 V valine              7.2         53           2
 W tryptophan          0.5          4           1
 Y tyrosine            2.8         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycyl-tRNA synthetase 
PARS2                 0.010   prolyl-tRNA synthetase (mitochondrial)(putative) [Ho...
EPRS                  0.008   glutamyl-prolyl tRNA synthetase 
MYH10                 0.007   myosin, heavy polypeptide 10, non-muscle 
TARS2                 0.007   threonyl-tRNA synthetase 2, mitochondrial 
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
ZNF318                0.006   zinc finger protein 318 
MYH14                 0.006   myosin, heavy chain 14 isoform 1 
MYH14                 0.006   myosin, heavy chain 14 isoform 2 
MYH14                 0.006   myosin, heavy chain 14 isoform 3 
DDX60L                0.006   DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like [Hom...
RGPD8                 0.006   PREDICTED: RANBP2-like and GRIP domain containing 8...
AKAP9                 0.006   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.006   A-kinase anchor protein 9 isoform 3 
MYH9                  0.005   myosin, heavy polypeptide 9, non-muscle 
RANBP2                0.005   RAN binding protein 2 
SPEF2                 0.005   KPL2 protein isoform 1 
RAPH1                 0.005   Ras association and pleckstrin homology domains 1 is...
RGPD5                 0.005   RANBP2-like and GRIP domain containing 5 isoform 1 [...
RGPD5                 0.005   RANBP2-like and GRIP domain containing 5 isoform 2 [...
RGPD7                 0.005   RANBP2-like and GRIP domain containing 7 
RGPD6                 0.005   RANBP2-like and GRIP domain containing 6 
ANKLE2                0.005   ankyrin repeat and LEM domain containing 2 
NEK1                  0.004   NIMA-related kinase 1 
FBXO41                0.004   F-box protein 41 
CXorf58               0.004   hypothetical protein LOC254158 
DSP                   0.004   desmoplakin isoform I 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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