Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: C19orf67 Sequence: fasta or formatted (368aa) NCBI GI: 89052437
Description:

PREDICTED: chromosome 19 open reading frame 67

Not currently referenced in the text

Other entries for this name:
alt mRNA {368aa} PREDICTED: chromosome 19 open reading frame 67
alt mRNA {368aa} PREDICTED: chromosome 19 open reading frame 67
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         24           3
 C cysteine            2.2          8           1
 D aspartate           5.2         19           2
 E glutamate           6.5         24           2
 F phenylalanine       3.8         14           2
 G glycine             7.6         28           2
 H histidine           0.5          2           1
 I isoleucine          3.8         14           1
 K lysine              2.7         10           2
 L leucine            13.0         48           2
 M methionine          1.6          6           1
 N asparagine          0.8          3           1
 P proline            11.4         42           3
 Q glutamine           6.0         22           2
 R arginine            6.2         23           2
 S serine              7.3         27           2
 T threonine           5.4         20           1
 V valine              2.7         10           1
 W tryptophan          1.9          7           1
 Y tyrosine            4.6         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: chromosome 19 open reading frame 67 [Homo... 
C19orf67              1.000   PREDICTED: chromosome 19 open reading frame 67 [Hom...
C19orf67              1.000   PREDICTED: chromosome 19 open reading frame 67 [Homo...
SMARCA4               0.034   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.034   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.034   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.034   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.034   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.034   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.034   SWI/SNF-related matrix-associated actin-dependent re...
WBP11                 0.028   WW domain binding protein 11 
SPEG                  0.024   SPEG complex locus 
PRB3                  0.024   proline-rich protein BstNI subfamily 3 precursor [H...
SF3B4                 0.024   splicing factor 3b, subunit 4 
PCLO                  0.023   piccolo isoform 2 
PCLO                  0.023   piccolo isoform 1 
MLL2                  0.022   myeloid/lymphoid or mixed-lineage leukemia 2 
FMNL1                 0.022   formin-like 1 
WIPF1                 0.020   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.020   WAS/WASL interacting protein family, member 1 
MAPK7                 0.020   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.020   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.020   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.020   mitogen-activated protein kinase 7 isoform 2 
ZNF219                0.020   zinc finger protein 219 
ZNF219                0.020   zinc finger protein 219 
ZNF219                0.020   zinc finger protein 219 
DCAF10                0.020   WD repeat domain 32 
CPSF6                 0.020   cleavage and polyadenylation specific factor 6, 68 ...
COL4A4                0.019   alpha 4 type IV collagen precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press