Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239743906
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo
sapiens]
(217 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749631 PREDICTED: hypothetical protein [Homo sapiens] 454 e-128
gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo ... 454 e-128
gi|239755142 PREDICTED: hypothetical protein [Homo sapiens] 324 3e-89
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 46 2e-05
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 46 2e-05
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 46 2e-05
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 46 3e-05
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 44 1e-04
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 44 1e-04
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 44 1e-04
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|153792074 proline rich 12 [Homo sapiens] 44 1e-04
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens] 42 5e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 41 7e-04
gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo ... 40 0.001
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 40 0.002
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 40 0.002
gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] 40 0.002
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.003
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 39 0.003
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.003
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.003
>gi|239749631 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 454 bits (1167), Expect = e-128
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE
Sbjct: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
Query: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR
Sbjct: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
Query: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALRL 180
LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALRL
Sbjct: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALRL 180
Query: 181 LLPPAPRRRARSWACGPGWEVRGKGWWEALQSGCGGP 217
LLPPAPRRRARSWACGPGWEVRGKGWWEALQSGCGGP
Sbjct: 181 LLPPAPRRRARSWACGPGWEVRGKGWWEALQSGCGGP 217
>gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo
sapiens]
Length = 217
Score = 454 bits (1167), Expect = e-128
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE
Sbjct: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
Query: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR
Sbjct: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
Query: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALRL 180
LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALRL
Sbjct: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALRL 180
Query: 181 LLPPAPRRRARSWACGPGWEVRGKGWWEALQSGCGGP 217
LLPPAPRRRARSWACGPGWEVRGKGWWEALQSGCGGP
Sbjct: 181 LLPPAPRRRARSWACGPGWEVRGKGWWEALQSGCGGP 217
>gi|239755142 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 324 bits (831), Expect = 3e-89
Identities = 165/179 (92%), Positives = 165/179 (92%)
Query: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE
Sbjct: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
Query: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR
Sbjct: 61 PSYSRERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPR 120
Query: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALR 179
LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAAD S PR AA R
Sbjct: 121 LHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADR 179
Score = 30.4 bits (67), Expect = 1.2
Identities = 30/90 (33%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 110 PARRCSARRPRLHQGGAG-RLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGG 168
P R RR L AG + GG AG R P + S R W
Sbjct: 25 PGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSR----ERRETMEGKGGWSAA 80
Query: 169 LPR-PPAPAALRLLLPPAPRRRARSWACGP 197
L PP PAA L PA RR + S GP
Sbjct: 81 LGSLPPPPAAACTALKPATRRGSCSAPLGP 110
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 46.2 bits (108), Expect = 2e-05
Identities = 62/208 (29%), Positives = 76/208 (36%), Gaps = 31/208 (14%)
Query: 8 PLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRER 67
P +L RRG PG S R+GL A G R R P + +R+
Sbjct: 150 PRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQA 209
Query: 68 ------RETMEGKGGWSAALG--------SLPPPPAAACTALKPATR------RGSCSAP 107
R G SAA G S+ AA C L P R R S + P
Sbjct: 210 GPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARP 269
Query: 108 ---LGPARRC----SARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADV 160
PAR + RR R++ + R A+ A+ R P+R S L R A
Sbjct: 270 PLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGL----RARAAR 325
Query: 161 RPFSWVGGLPRPPAPAALRLLLPPAPRR 188
RP G P P PAALR P P R
Sbjct: 326 RPGLDPGPAPYPLTPAALRPGTSPHPGR 353
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 46.2 bits (108), Expect = 2e-05
Identities = 62/208 (29%), Positives = 76/208 (36%), Gaps = 31/208 (14%)
Query: 8 PLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRER 67
P +L RRG PG S R+GL A G R R P + +R+
Sbjct: 150 PRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQA 209
Query: 68 ------RETMEGKGGWSAALG--------SLPPPPAAACTALKPATR------RGSCSAP 107
R G SAA G S+ AA C L P R R S + P
Sbjct: 210 GPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARP 269
Query: 108 ---LGPARRC----SARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADV 160
PAR + RR R++ + R A+ A+ R P+R S L R A
Sbjct: 270 PLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGL----RARAAR 325
Query: 161 RPFSWVGGLPRPPAPAALRLLLPPAPRR 188
RP G P P PAALR P P R
Sbjct: 326 RPGLDPGPAPYPLTPAALRPGTSPHPGR 353
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 46.2 bits (108), Expect = 2e-05
Identities = 62/208 (29%), Positives = 76/208 (36%), Gaps = 31/208 (14%)
Query: 8 PLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRER 67
P +L RRG PG S R+GL A G R R P + +R+
Sbjct: 150 PRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQA 209
Query: 68 ------RETMEGKGGWSAALG--------SLPPPPAAACTALKPATR------RGSCSAP 107
R G SAA G S+ AA C L P R R S + P
Sbjct: 210 GPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARP 269
Query: 108 ---LGPARRC----SARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADV 160
PAR + RR R++ + R A+ A+ R P+R S L R A
Sbjct: 270 PLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGL----RARAAR 325
Query: 161 RPFSWVGGLPRPPAPAALRLLLPPAPRR 188
RP G P P PAALR P P R
Sbjct: 326 RPGLDPGPAPYPLTPAALRPGTSPHPGR 353
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 45.8 bits (107), Expect = 3e-05
Identities = 62/211 (29%), Positives = 78/211 (36%), Gaps = 23/211 (10%)
Query: 17 RGRRGERRPGLRSEGRRKG--------LLAAEAG--GAVLGGGR-RAGRRAEPPEPSYS- 64
R R G R PG + G R+G L A G G+VL R R G R P P+
Sbjct: 32 RERHGPRTPGGQLPGARRGPGPRRPAPLPARPPGALGSVLRPLRARPGCRPRRPHPAARC 91
Query: 65 ---RERRETMEGK--GGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRP 119
R R T + GG+ A GS P P A G + + A+R
Sbjct: 92 LPLRPHRPTRRHRRPGGFPLAWGSPQPAPRPAPGRSSALALAGGAAPGVARAQRPGGSGG 151
Query: 120 RLHQGGAGRLAAGGAEAGERRSP-----NRGATSSLSPIARGAADVRPFSWVGGLPRPPA 174
R H GG G GG R P R + + RGAA P + G +
Sbjct: 152 RSHPGGPGSPRGGGTVGPGDRGPAAADGGRPQRTVRAAETRGAAAAPPLTLEGPVQSHHG 211
Query: 175 PAALRLLLPPAPRRRARSWACGPGWEVRGKG 205
AL P +PR A+ AC +VR G
Sbjct: 212 TPAL-TQGPQSPRDGAQLGACTRPVDVRDSG 241
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 43.9 bits (102), Expect = 1e-04
Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Query: 78 SAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGG---- 133
S+A GS PPPPAAA L+P RG + S GG GR GG
Sbjct: 12 SSASGSFPPPPAAA--RLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPS 69
Query: 134 AEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAA 177
+ G R + + S P+ AA + P + VG P PAP A
Sbjct: 70 SSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGA-PAGPAPVA 112
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 43.9 bits (102), Expect = 1e-04
Identities = 72/243 (29%), Positives = 85/243 (34%), Gaps = 58/243 (23%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAV--------------LGGGRRAGRR--AEP 58
PRRG G G + GRR G +AA G V L A R A
Sbjct: 229 PRRGA-GRAGAGAAACGRR-GRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAAL 286
Query: 59 PEPSYSRERRETMEGKGGWSAALGSLPPPPA-----AACTALKPATRRGSCSAPLGPAR- 112
P +S R G+GG +A GS PA A TA +PA+ + P
Sbjct: 287 PRSGFSGRPR----GRGGAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTW 342
Query: 113 --RCSARRPRLHQGGAGRLAAG-GAEAGE----------RRSPNRGATSSLS-------- 151
R A+R HQ G R G G A E R+ P R +SL
Sbjct: 343 TSRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRPP 402
Query: 152 ---PIARGAADVRPFSWVGGLPRPP--APAALRLLLPPAPRRRARSWACGPGW---EVRG 203
P G A P +W GG P PP P R P P R R GW G
Sbjct: 403 CARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGP-RAPRGGPASSGWHAGSAAG 461
Query: 204 KGW 206
+GW
Sbjct: 462 RGW 464
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 43.9 bits (102), Expect = 1e-04
Identities = 72/243 (29%), Positives = 85/243 (34%), Gaps = 58/243 (23%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAV--------------LGGGRRAGRR--AEP 58
PRRG G G + GRR G +AA G V L A R A
Sbjct: 229 PRRGA-GRAGAGAAACGRR-GRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAAL 286
Query: 59 PEPSYSRERRETMEGKGGWSAALGSLPPPPA-----AACTALKPATRRGSCSAPLGPAR- 112
P +S R G+GG +A GS PA A TA +PA+ + P
Sbjct: 287 PRSGFSGRPR----GRGGAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTW 342
Query: 113 --RCSARRPRLHQGGAGRLAAG-GAEAGE----------RRSPNRGATSSLS-------- 151
R A+R HQ G R G G A E R+ P R +SL
Sbjct: 343 TSRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRPP 402
Query: 152 ---PIARGAADVRPFSWVGGLPRPP--APAALRLLLPPAPRRRARSWACGPGW---EVRG 203
P G A P +W GG P PP P R P P R R GW G
Sbjct: 403 CARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGP-RAPRGGPASSGWHAGSAAG 461
Query: 204 KGW 206
+GW
Sbjct: 462 RGW 464
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 43.5 bits (101), Expect = 1e-04
Identities = 52/161 (32%), Positives = 63/161 (39%), Gaps = 16/161 (9%)
Query: 35 GLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGWSAALGSLPPPPAAA--- 91
G+ AA G AV GGG AGRR + G A L + P PAAA
Sbjct: 4 GVQAARFGAAVRGGG--AGRRVRV---GVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPP 58
Query: 92 CTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLS 151
+PA R S A P RR P GG G +A+ A + R GA + +
Sbjct: 59 APRERPAAARLSALAAAQPRRRS----PGPQGGGGGDIASPLPPALQPR----GAPAVPA 110
Query: 152 PIARGAADVRPFSWVGGLPRPPAPAALRLLLPPAPRRRARS 192
+ G RP S P PP P A L P P + RS
Sbjct: 111 APSPGPLPARPSSPPPSPPSPPVPTAQSSLPAPWPPQGPRS 151
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 43.5 bits (101), Expect = 1e-04
Identities = 48/156 (30%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 29 SEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGWSAALG--SLPP 86
+ GR G AA GGA GGG G R P Y GKGG+ AA G + PP
Sbjct: 358 ASGRATGPEAAGGGGAGGGGG---GYRPIIQSPGYKT-------GKGGYGAAAGGATRPP 407
Query: 87 PPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGA 146
PP + T C + GPA + G+ + G G+ SP +
Sbjct: 408 PPRSTATP--------KCQSLGGPAAAYA----------TGKASGAGGAGGQAYSPGQ-P 448
Query: 147 TSSLSPIARG-------AADV-RPFSWVGGLPRPPA 174
L P A G A D+ + S+ GG P+PP+
Sbjct: 449 QGLLGPQAYGQGFGGGQAQDLSKAPSYSGGPPQPPS 484
Score = 28.1 bits (61), Expect = 6.0
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 57 EPPEPSYSRERRETMEGKGGWSAALGSLPP-PPAAACTALKPATRRG 102
EP PS E+++ G LG+L P PPA T + P G
Sbjct: 860 EPAAPSPRLRPEESLDPPGAMQELLGALEPLPPAPGDTGVGPPNSEG 906
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/94 (35%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGK 74
PR R G RRPG+R +G AA G RR PP P R +
Sbjct: 172 PRGTRGGARRPGVRGQG-----AAAVGPTGPRPTGAPPSRRTPPPGP---RRPLRSPHSG 223
Query: 75 GGWSAALGSLPPPPAAACTALKPATRRGSCSAPL 108
GW+ A P PPA A AL+P APL
Sbjct: 224 SGWTPA--RPPSPPAGAPEALRPPASTTRAPAPL 255
Score = 37.0 bits (84), Expect = 0.013
Identities = 34/102 (33%), Positives = 37/102 (36%), Gaps = 29/102 (28%)
Query: 101 RGSCSAPLGPA---RRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGA 157
RG S P + RR RRPR +GGA R G +GA
Sbjct: 151 RGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRG---------------------QGA 189
Query: 158 ADVRPFSWVGGLPRPPAPAALRLLLPPAPRRRARSWACGPGW 199
A V P PRP R PP PRR RS G GW
Sbjct: 190 AAVGPTG-----PRPTGAPPSRRTPPPGPRRPLRSPHSGSGW 226
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/94 (35%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGK 74
PR R G RRPG+R +G AA G RR PP P R +
Sbjct: 172 PRGTRGGARRPGVRGQG-----AAAVGPTGPRPTGAPPSRRTPPPGP---RRPLRSPHSG 223
Query: 75 GGWSAALGSLPPPPAAACTALKPATRRGSCSAPL 108
GW+ A P PPA A AL+P APL
Sbjct: 224 SGWTPA--RPPSPPAGAPEALRPPASTTRAPAPL 255
Score = 37.0 bits (84), Expect = 0.013
Identities = 34/102 (33%), Positives = 37/102 (36%), Gaps = 29/102 (28%)
Query: 101 RGSCSAPLGPA---RRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGA 157
RG S P + RR RRPR +GGA R G +GA
Sbjct: 151 RGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRG---------------------QGA 189
Query: 158 ADVRPFSWVGGLPRPPAPAALRLLLPPAPRRRARSWACGPGW 199
A V P PRP R PP PRR RS G GW
Sbjct: 190 AAVGPTG-----PRPTGAPPSRRTPPPGPRRPLRSPHSGSGW 226
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/94 (35%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGK 74
PR R G RRPG+R +G AA G RR PP P R +
Sbjct: 172 PRGTRGGARRPGVRGQG-----AAAVGPTGPRPTGAPPSRRTPPPGP---RRPLRSPHSG 223
Query: 75 GGWSAALGSLPPPPAAACTALKPATRRGSCSAPL 108
GW+ A P PPA A AL+P APL
Sbjct: 224 SGWTPA--RPPSPPAGAPEALRPPASTTRAPAPL 255
Score = 37.0 bits (84), Expect = 0.013
Identities = 34/102 (33%), Positives = 37/102 (36%), Gaps = 29/102 (28%)
Query: 101 RGSCSAPLGPA---RRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGA 157
RG S P + RR RRPR +GGA R G +GA
Sbjct: 151 RGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRG---------------------QGA 189
Query: 158 ADVRPFSWVGGLPRPPAPAALRLLLPPAPRRRARSWACGPGW 199
A V P PRP R PP PRR RS G GW
Sbjct: 190 AAVGPTG-----PRPTGAPPSRRTPPPGPRRPLRSPHSGSGW 226
>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
Length = 556
Score = 41.6 bits (96), Expect = 5e-04
Identities = 60/206 (29%), Positives = 72/206 (34%), Gaps = 39/206 (18%)
Query: 15 PRRGRRGERRPGLRS--EGRRKGLLAA----EAGGAVLGGGR------RAGRRAEPPEPS 62
P +G G RP LR G R G L GG V G+ R G R E PE
Sbjct: 362 PYQGTPGRDRP-LRDCYSGPRLGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEAPEQG 420
Query: 63 YSRERRETMEGKG-----GWSAALGSLPPPPAAACTALKPATRRGSCS-APLGPARRCSA 116
R + +G G + A LP PP L P RR C A GPA+
Sbjct: 421 KPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPPPPLPPPPRREPCHRAWPGPAQPLGN 480
Query: 117 RRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWV----GGLPRP 172
RP + Q A GG R+ G + S RG + R GG P
Sbjct: 481 LRPPVQQS-----APGG-----RKCVKEGEATGPSKETRGPKECRQVGEAVLGEGGAPMQ 530
Query: 173 PAPAALRLLLPPAPRRRARSWACGPG 198
+P PP + CGPG
Sbjct: 531 SSPG------PPNRCLQRLEMRCGPG 550
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 41.2 bits (95), Expect = 7e-04
Identities = 48/182 (26%), Positives = 64/182 (35%), Gaps = 6/182 (3%)
Query: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRA----GRRAEPPEPSYSRERRETM 71
+RGR R P R R + + A G R+ GR P P +SR R
Sbjct: 491 KRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR 550
Query: 72 EGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAA 131
G+ + S PA + R S PARR S R + R A
Sbjct: 551 RGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPA 610
Query: 132 GGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVG-GLPRPPAPAALRLLLPPAPRRRA 190
+ R+P R + + SP+ R + P G R PA PA R R+
Sbjct: 611 RRGRS-RSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRS 669
Query: 191 RS 192
RS
Sbjct: 670 RS 671
Score = 34.3 bits (77), Expect = 0.084
Identities = 42/161 (26%), Positives = 54/161 (33%), Gaps = 17/161 (10%)
Query: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKG 75
RRGR R P R GR + A G + R R+ P SR R G+
Sbjct: 558 RRGRSHSRSPATR--GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRS 615
Query: 76 G--WSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGG 133
A S P + + RR S PARR +R + G R
Sbjct: 616 RSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPA 675
Query: 134 AEAGERRS-------------PNRGATSSLSPIARGAADVR 161
+G RS P RG + S S + RG + R
Sbjct: 676 RRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSR 716
>gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo
sapiens]
Length = 209
Score = 40.4 bits (93), Expect = 0.001
Identities = 54/187 (28%), Positives = 71/187 (37%), Gaps = 38/187 (20%)
Query: 28 RSEGRRKGLLAAE-AGGAVLGGGRRAGRR----AEPPEPSYSRERRETMEGKGGWSAALG 82
R +G + E A G + G R A PP P R + G+ G
Sbjct: 50 RKSRLERGTFSPESAAGTEVSGAPHPDSRTRPAARPPHP-----RTRSPPGRSGSGTTFS 104
Query: 83 SLPPPPAA--ACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERR 140
++PP P+ + + L+PA AP GP CS+ R A +A R
Sbjct: 105 AVPPRPSQHQSGSRLRPA-------AP-GPRPGCSSAR--------ASPAPAAPQAAART 148
Query: 141 SPNRGATSSLSPIARGAAD----VRPFSWVGGLPRPPAPAALRLLLPPAPRRRARSWACG 196
+P R A+ P +RG RP S GG P P R APRR AR +
Sbjct: 149 APGRAASGGSGPGSRGQGSDQVGARP-SRAGGQPPPLTCRRCR----AAPRRSARPFR-R 202
Query: 197 PGWEVRG 203
PG RG
Sbjct: 203 PGLPCRG 209
Score = 28.1 bits (61), Expect = 6.0
Identities = 26/91 (28%), Positives = 33/91 (36%), Gaps = 13/91 (14%)
Query: 111 ARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLP 170
AR C RR A R + G R +R + SP + + V G P
Sbjct: 20 ARACGGRRANFSLSAAFRTCSSGTCRLTRSRKSRLERGTFSPESAAGTE------VSGAP 73
Query: 171 RPPA---PAALRLLLPPAPRRRARSWACGPG 198
P + PAA PP PR R+ G G
Sbjct: 74 HPDSRTRPAA----RPPHPRTRSPPGRSGSG 100
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 40.0 bits (92), Expect = 0.002
Identities = 55/194 (28%), Positives = 70/194 (36%), Gaps = 34/194 (17%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGK 74
PR GRRG G GR A A R EPPEP + + +
Sbjct: 48 PRNGRRGPLWKGRGPAGRAPAASAETA----------LPRPREPPEPGAGPSPKRSPPPR 97
Query: 75 GGWSAALGSLPPPPAAACTALKPATRRGSC-------------SAPLGPARRCSARRPRL 121
+++L + P P + R G C S GP R AR
Sbjct: 98 APRASSLAA--PEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPR---ARSCAP 152
Query: 122 HQGGAGRLAAGGAEAGERRSPNRGAT--SSLSPIARGAADVRPFSWVGGLPRPPAPAALR 179
H G G EAG R S RGA SS +P A+ RP + L PP PA+ R
Sbjct: 153 HPAREGMATTRGPEAGLRVS-GRGARAGSSTAPTRAQASPARP-GFPPCLRSPPCPASSR 210
Query: 180 LLLPPAPRRRARSW 193
+ RA++W
Sbjct: 211 AF--RSCLSRAKAW 222
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 39.7 bits (91), Expect = 0.002
Identities = 58/177 (32%), Positives = 70/177 (39%), Gaps = 40/177 (22%)
Query: 31 GRRKG--LLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGWSAALGSLPPPP 88
GR +G L A GG+ G GR G R RR + +A+L PP P
Sbjct: 612 GRHEGGPLGGAGGGGSGEGQGRGPGSRVSV--------RRSSRAPSSCRAASLA--PPRP 661
Query: 89 AAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATS 148
A+A +A GS ++P P S A L A G+RRS RG
Sbjct: 662 ASATSA-------GSPTSPAPPLHMVST-----DGCSAAFLVLDSARKGDRRSARRGGPR 709
Query: 149 SLSPIARGAADVRPFSWV-GGLPRPP---APAALRLLLPP----APRRRARSWACGP 197
S P AR SWV PR P +P A LP +P R ARS A GP
Sbjct: 710 SWRPSARA-------SWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLA-GP 758
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 39.7 bits (91), Expect = 0.002
Identities = 58/177 (32%), Positives = 70/177 (39%), Gaps = 40/177 (22%)
Query: 31 GRRKG--LLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGWSAALGSLPPPP 88
GR +G L A GG+ G GR G R RR + +A+L PP P
Sbjct: 612 GRHEGGPLGGAGGGGSGEGQGRGPGSRVSV--------RRSSRAPSSCRAASLA--PPRP 661
Query: 89 AAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATS 148
A+A +A GS ++P P S A L A G+RRS RG
Sbjct: 662 ASATSA-------GSPTSPAPPLHMVST-----DGCSAAFLVLDSARKGDRRSARRGGPR 709
Query: 149 SLSPIARGAADVRPFSWV-GGLPRPP---APAALRLLLPP----APRRRARSWACGP 197
S P AR SWV PR P +P A LP +P R ARS A GP
Sbjct: 710 SWRPSARA-------SWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLA-GP 758
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 39.7 bits (91), Expect = 0.002
Identities = 37/128 (28%), Positives = 48/128 (37%), Gaps = 8/128 (6%)
Query: 43 GAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGWSAALGSLP----PPPAAACTALKPA 98
G G R +G R+ P + G G S A G P PP +
Sbjct: 286 GRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRV 345
Query: 99 TRRGSCSAPLGPARRCSARRPR---LHQGGAGRLAAG-GAEAGERRSPNRGATSSLSPIA 154
+ + +AP PAR + PR QG GR A G G RR R +S+ +P
Sbjct: 346 RDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRR 405
Query: 155 RGAADVRP 162
RG RP
Sbjct: 406 RGRRRPRP 413
Score = 33.1 bits (74), Expect = 0.19
Identities = 42/142 (29%), Positives = 50/142 (35%), Gaps = 17/142 (11%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGK 74
P RG+ P RS +G AGGA G RR RR S S RR
Sbjct: 354 PTPPARGKESPSPRSAPSSQGRGGRAAGGA--GRRRRRRRRRRRSRSSASAPRRR----- 406
Query: 75 GGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGA 134
P PP + +L A R S + G P +G G G
Sbjct: 407 ----GRRRPRPAPPRGSSRSLSRA--RSSSDSGSGRGAPGPGPEPGSERGHGGH----GK 456
Query: 135 EAGERRSPNRGATSSLSPIARG 156
A ER R A++S SP A G
Sbjct: 457 RAKERPPRARPASTSPSPGAHG 478
Score = 32.3 bits (72), Expect = 0.32
Identities = 39/136 (28%), Positives = 46/136 (33%), Gaps = 18/136 (13%)
Query: 17 RGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGG 76
RG R G R RR+ + + A GRR R A P S S R + G
Sbjct: 375 RGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGS 434
Query: 77 WSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEA 136
A G P P GS G +R R PR A + GA
Sbjct: 435 GRGAPGPGPEP--------------GSERGHGGHGKRAKERPPRARP--ASTSPSPGAHG 478
Query: 137 GERRSPNRGATSSLSP 152
RR G +SS SP
Sbjct: 479 --RRGGPEGKSSSRSP 492
>gi|37537554 hypothetical protein FLJ37538 [Homo sapiens]
Length = 841
Score = 39.7 bits (91), Expect = 0.002
Identities = 39/109 (35%), Positives = 45/109 (41%), Gaps = 35/109 (32%)
Query: 85 PPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNR 144
PPPPAA L P+ R S S PL P QG G GER PN
Sbjct: 387 PPPPAANLLLLGPSGRARSHSTPLPP------------QG-------SGQPRGERELPN- 426
Query: 145 GATSSLSPIARGAADVRPFSWVGGLPRPPAPAALRLLLPPAPRRRARSW 193
+ S + P A GA PPAPAA LLP P+ +A S+
Sbjct: 427 -SHSMICPKAAGAP-----------AAPPAPAA---LLPGPPKDKAVSY 460
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 39.3 bits (90), Expect = 0.003
Identities = 67/229 (29%), Positives = 79/229 (34%), Gaps = 41/229 (17%)
Query: 5 PSSPLFKLNFPRRGR---RGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRR--AEPP 59
P+ P +L PR+ G+ PG G +G A GG + GGR A RR A
Sbjct: 4 PTQPARRLQ-PRKSSFPGDGDEAPG---PGGGEGAAAGGGGGGLGSGGRSAQRRAGAGAR 59
Query: 60 EPSYSRERRETMEGKGGWSAALGSLPPPPAAACTALK-----PATR------RGSCSAPL 108
P + GW G PP P K P R R C+
Sbjct: 60 RPIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTA 119
Query: 109 GPARRCSARRPR----LHQGGAGR----LAAGGAEAGE-RRSPNRGATSSLSPIARGAAD 159
RR A PR GAGR AGG A E P RG + L R A +
Sbjct: 120 VRRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRPAPLHLPEREATE 179
Query: 160 VRPFSWVGGLPRPPAPAALRLLLPPAPRRRARS----WACG-PGWEVRG 203
RP R A LR+L P P R R W G W + G
Sbjct: 180 ARP-------RRRRARRRLRVLEPHPPARLGRGIGRVWVKGITAWGLEG 221
Score = 31.6 bits (70), Expect = 0.54
Identities = 44/149 (29%), Positives = 51/149 (34%), Gaps = 44/149 (29%)
Query: 107 PLGPARRCSARR------------PRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIA 154
P PARR R+ P +G A GG +G R + R + PI
Sbjct: 4 PTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIG 63
Query: 155 RGAADVRPFSWVGGLPR-----PPAPAA------LRLLLPP---------------APRR 188
A V P + G R PP P LR LPP A RR
Sbjct: 64 -AAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRR 122
Query: 189 RARSWACGPGWEVRGKGWWEALQSGCGGP 217
R R A P RG GW E +G G P
Sbjct: 123 RRRR-APSP----RGAGWREGAGAGRGTP 146
Score = 28.1 bits (61), Expect = 6.0
Identities = 40/133 (30%), Positives = 48/133 (36%), Gaps = 25/133 (18%)
Query: 19 RRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEP--------PEPSYSRERRET 70
RR R P R G R+G A A + GG A AEP P P + E RE
Sbjct: 122 RRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWA---AEPLHLPQRGRPAPLHLPE-REA 177
Query: 71 MEGKGGWSAALGSL----PPPPAAACTALKPATRRGSC---------SAPLGPARRCSAR 117
E + A L P PPA + +G SAP A +AR
Sbjct: 178 TEARPRRRRARRRLRVLEPHPPARLGRGIGRVWVKGITAWGLEGHIFSAPRISATASTAR 237
Query: 118 RPRLHQGGAGRLA 130
RP + Q R A
Sbjct: 238 RPTVVQRWGARAA 250
>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 39.3 bits (90), Expect = 0.003
Identities = 67/229 (29%), Positives = 79/229 (34%), Gaps = 41/229 (17%)
Query: 5 PSSPLFKLNFPRRGR---RGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRR--AEPP 59
P+ P +L PR+ G+ PG G +G A GG + GGR A RR A
Sbjct: 4 PTQPARRLQ-PRKSSFPGDGDEAPG---PGGGEGAAAGGGGGGLGSGGRSAQRRAGAGAR 59
Query: 60 EPSYSRERRETMEGKGGWSAALGSLPPPPAAACTALK-----PATR------RGSCSAPL 108
P + GW G PP P K P R R C+
Sbjct: 60 RPIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTA 119
Query: 109 GPARRCSARRPR----LHQGGAGR----LAAGGAEAGE-RRSPNRGATSSLSPIARGAAD 159
RR A PR GAGR AGG A E P RG + L R A +
Sbjct: 120 VRRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRPAPLHLPEREATE 179
Query: 160 VRPFSWVGGLPRPPAPAALRLLLPPAPRRRARS----WACG-PGWEVRG 203
RP R A LR+L P P R R W G W + G
Sbjct: 180 ARP-------RRRRARRRLRVLEPHPPARLGRGIGRVWVKGITAWGLEG 221
Score = 31.6 bits (70), Expect = 0.54
Identities = 44/149 (29%), Positives = 51/149 (34%), Gaps = 44/149 (29%)
Query: 107 PLGPARRCSARR------------PRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIA 154
P PARR R+ P +G A GG +G R + R + PI
Sbjct: 4 PTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIG 63
Query: 155 RGAADVRPFSWVGGLPR-----PPAPAA------LRLLLPP---------------APRR 188
A V P + G R PP P LR LPP A RR
Sbjct: 64 -AAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRR 122
Query: 189 RARSWACGPGWEVRGKGWWEALQSGCGGP 217
R R A P RG GW E +G G P
Sbjct: 123 RRRR-APSP----RGAGWREGAGAGRGTP 146
Score = 28.1 bits (61), Expect = 6.0
Identities = 40/133 (30%), Positives = 48/133 (36%), Gaps = 25/133 (18%)
Query: 19 RRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEP--------PEPSYSRERRET 70
RR R P R G R+G A A + GG A AEP P P + E RE
Sbjct: 122 RRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWA---AEPLHLPQRGRPAPLHLPE-REA 177
Query: 71 MEGKGGWSAALGSL----PPPPAAACTALKPATRRGSC---------SAPLGPARRCSAR 117
E + A L P PPA + +G SAP A +AR
Sbjct: 178 TEARPRRRRARRRLRVLEPHPPARLGRGIGRVWVKGITAWGLEGHIFSAPRISATASTAR 237
Query: 118 RPRLHQGGAGRLA 130
RP + Q R A
Sbjct: 238 RPTVVQRWGARAA 250
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 38.9 bits (89), Expect = 0.003
Identities = 51/184 (27%), Positives = 67/184 (36%), Gaps = 19/184 (10%)
Query: 18 GRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRR--AGRRAEPPEPSYSRERRETMEGKG 75
G++G R + R K A + A+ G RR +G P P+ +R R G
Sbjct: 130 GQKGLRISAEETVARGKATEAPKRS-ALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 188
Query: 76 GWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAE 135
A + P PP + S + P ARR RP A GG +
Sbjct: 189 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR----RPS---------AGGGLQ 235
Query: 136 AGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALRLLLPP--APRRRARSW 193
RS + AT SP AR R P P P L+ L PP P R+ +
Sbjct: 236 RPASRSLSSSATPLSSP-ARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 294
Query: 194 ACGP 197
A GP
Sbjct: 295 ALGP 298
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 38.9 bits (89), Expect = 0.003
Identities = 55/191 (28%), Positives = 64/191 (33%), Gaps = 27/191 (14%)
Query: 5 PSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGR-RAGRRAEPPEPSY 63
P++P ++ P R R P LRS R A GA+ R RA R P
Sbjct: 213 PTAPPARVREPGRAEGASREPRLRSRAARPP--PAPGPGALSRASRSRAAGRPGPGFHGG 270
Query: 64 SRERRETMEGKGGW--SAALGSLPPPPAAACTA------LKPATRRGSCS--------AP 107
+ G GG ALG PP A A RRG C A
Sbjct: 271 EKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPAT 330
Query: 108 LGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVG 167
G RC R R +GG G A G P R + GAA +R S G
Sbjct: 331 SGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEV-----GAAVLRAGSGEG 385
Query: 168 ---GLPRPPAP 175
GL P P
Sbjct: 386 SRRGLQLTPPP 396
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 38.9 bits (89), Expect = 0.003
Identities = 58/209 (27%), Positives = 75/209 (35%), Gaps = 51/209 (24%)
Query: 28 RSEGRRKGLLAAE-AGGAVLGGGRRAGRR----AEPPEPSYSRERRETMEGKGGWSAALG 82
R +G + E A G + G R A PP P R + G+ G
Sbjct: 50 RKSRLERGTFSPESAAGTEVSGAPHPDSRTRPAARPPHP-----RTRSPPGRSGSGTTFS 104
Query: 83 SLPPPPAA--ACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERR 140
++PP P+ + + L+PA AP GP CS+ R A +A R
Sbjct: 105 AVPPRPSQHQSGSRLRPA-------AP-GPRPGCSSAR--------ASPAPAAPQAAART 148
Query: 141 SPNRGATSSLSPIARGAAD----VRPFSWVGGLPRPPAPAALRLLLPPAPRRRARSW--- 193
+P R A+ P +RG RP S GG P P R APRR AR +
Sbjct: 149 APGRAASGGSGPGSRGQGSDQVGARP-SRAGGQPPPLTCRRCR----AAPRRSARPFRRP 203
Query: 194 ------ACGPGWEVRGKGWWEALQSGCGG 216
G G R G W G GG
Sbjct: 204 GLPLKSRPGSGTGARSCGTW-----GSGG 227
Score = 30.0 bits (66), Expect = 1.6
Identities = 29/103 (28%), Positives = 36/103 (34%), Gaps = 12/103 (11%)
Query: 15 PRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRE----- 69
PRR R RRPGL + R A + G GG A P +S + +
Sbjct: 193 PRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIIIF 252
Query: 70 ----TMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPL 108
+ G GG + G P C L PA R PL
Sbjct: 253 GGALRVRGCGGRRRSNGQGTQP---GCRLLSPAPPRRRYRKPL 292
Score = 28.1 bits (61), Expect = 6.0
Identities = 26/91 (28%), Positives = 33/91 (36%), Gaps = 13/91 (14%)
Query: 111 ARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLP 170
AR C RR A R + G R +R + SP + + V G P
Sbjct: 20 ARACGGRRANFSLSAAFRTCSSGTCRLTRSRKSRLERGTFSPESAAGTE------VSGAP 73
Query: 171 RPPA---PAALRLLLPPAPRRRARSWACGPG 198
P + PAA PP PR R+ G G
Sbjct: 74 HPDSRTRPAA----RPPHPRTRSPPGRSGSG 100
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 38.9 bits (89), Expect = 0.003
Identities = 51/184 (27%), Positives = 67/184 (36%), Gaps = 19/184 (10%)
Query: 18 GRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRR--AGRRAEPPEPSYSRERRETMEGKG 75
G++G R + R K A + A+ G RR +G P P+ +R R G
Sbjct: 130 GQKGLRISAEETVARGKATEAPKRS-ALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 188
Query: 76 GWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAE 135
A + P PP + S + P ARR RP A GG +
Sbjct: 189 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR----RPS---------AGGGLQ 235
Query: 136 AGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALRLLLPP--APRRRARSW 193
RS + AT SP AR R P P P L+ L PP P R+ +
Sbjct: 236 RPASRSLSSSATPLSSP-ARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 294
Query: 194 ACGP 197
A GP
Sbjct: 295 ALGP 298
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 38.9 bits (89), Expect = 0.003
Identities = 51/184 (27%), Positives = 67/184 (36%), Gaps = 19/184 (10%)
Query: 18 GRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRR--AGRRAEPPEPSYSRERRETMEGKG 75
G++G R + R K A + A+ G RR +G P P+ +R R G
Sbjct: 121 GQKGLRISAEETVARGKATEAPKRS-ALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 179
Query: 76 GWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAE 135
A + P PP + S + P ARR RP A GG +
Sbjct: 180 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR----RPS---------AGGGLQ 226
Query: 136 AGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPPAPAALRLLLPP--APRRRARSW 193
RS + AT SP AR R P P P L+ L PP P R+ +
Sbjct: 227 RPASRSLSSSATPLSSP-ARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 285
Query: 194 ACGP 197
A GP
Sbjct: 286 ALGP 289
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,081,150
Number of Sequences: 37866
Number of extensions: 759165
Number of successful extensions: 5745
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 652
Number of HSP's that attempted gapping in prelim test: 4877
Number of HSP's gapped (non-prelim): 1376
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.