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Search of human proteins with 239743781
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
sapiens]
(228 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ... 485 e-137
gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 63 2e-10
gi|169184221 PREDICTED: family with sequence similarity 27, memb... 58 8e-09
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 57 1e-08
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 57 1e-08
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 57 1e-08
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 57 1e-08
gi|169211171 PREDICTED: hypothetical protein [Homo sapiens] 55 4e-08
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 55 4e-08
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 55 6e-08
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 54 1e-07
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 54 1e-07
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 54 1e-07
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 54 1e-07
gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 53 2e-07
gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo ... 53 2e-07
gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo ... 53 2e-07
gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 53 2e-07
gi|239752497 PREDICTED: similar to family with sequence similari... 52 5e-07
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ... 51 7e-07
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ... 51 9e-07
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 50 2e-06
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ... 47 1e-05
gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 45 4e-05
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ... 45 4e-05
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ... 45 4e-05
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 44 1e-04
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 44 1e-04
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 42 4e-04
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 42 4e-04
>gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
sapiens]
Length = 228
Score = 485 bits (1249), Expect = e-137
Identities = 228/228 (100%), Positives = 228/228 (100%)
Query: 1 MPTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHT 60
MPTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHT
Sbjct: 1 MPTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHT 60
Query: 61 QTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPITDTD 120
QTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPITDTD
Sbjct: 61 QTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPITDTD 120
Query: 121 IQQVTPTPRQPLKLPGSSLRDYEPPVRQQPTGTQGDLSLTSQGRHFWGDSPAHRPRTPEA 180
IQQVTPTPRQPLKLPGSSLRDYEPPVRQQPTGTQGDLSLTSQGRHFWGDSPAHRPRTPEA
Sbjct: 121 IQQVTPTPRQPLKLPGSSLRDYEPPVRQQPTGTQGDLSLTSQGRHFWGDSPAHRPRTPEA 180
Query: 181 GIPRCLPGDLSEVSSSWGFFLLVDPPRIPASGDRPGNCPGQGWSQPRL 228
GIPRCLPGDLSEVSSSWGFFLLVDPPRIPASGDRPGNCPGQGWSQPRL
Sbjct: 181 GIPRCLPGDLSEVSSSWGFFLLVDPPRIPASGDRPGNCPGQGWSQPRL 228
>gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 134
Score = 63.2 bits (152), Expect = 2e-10
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 10 TPKPEPPGKR-LPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRKR 68
TPK P +R L TG TQAET+ EA Q++ R A G P T+ QTDR+R+R
Sbjct: 22 TPKAGPRRRRRLTTGCTTQAETQKEAHQRQADM-REIALWRTGRIRPE-TYMQTDRERER 79
Query: 69 GRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPITDTDIQQVTP 126
++ R+ +ER+ R T T T +HTHT TH THT + + TP
Sbjct: 80 NTQRPRD-------KERKENGRHTHTHTLTHTHSHTHTHTHTQTHTQDHRAEALKHTP 130
>gi|169184221 PREDICTED: family with sequence similarity 27, member
E3 [Homo sapiens]
Length = 113
Score = 57.8 bits (138), Expect = 8e-09
Identities = 44/112 (39%), Positives = 54/112 (48%), Gaps = 30/112 (26%)
Query: 10 TPKPEPPGKR-LPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR-----THTQTD 63
TPK EP ++ L TG TQAE + +A Q++ R A G PR THTQTD
Sbjct: 21 TPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAM-RETALWCTGHIRPRTHTHTGTHTQTD 79
Query: 64 RDRKRG--RRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTH 113
R+R+R R ++RE RE R HTHT THRHTH
Sbjct: 80 RERERNTQRLRDRERRENGR---------------------HTHTYTHRHTH 110
Score = 28.5 bits (62), Expect = 5.0
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 59 HTQTDRDRKRGRRKEREGREGERERE---RERLKRETVVGTQTRARAHTHTQTHRHTHT 114
HT R+R + ER+++ R+ RET + R THT T HT T
Sbjct: 20 HTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQT 78
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 57.0 bits (136), Expect = 1e-08
Identities = 63/239 (26%), Positives = 86/239 (35%), Gaps = 27/239 (11%)
Query: 3 TLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHT-- 60
TL P +P PP K NT+A + + R R+ S PR+ T
Sbjct: 452 TLQPPPPVSEPAPPKKDGAISDNTKAALKAALLKSLRSRLRDGPSAPLEAPEPRKPVTAQ 511
Query: 61 --QTDRDRKRGRRKEREGREGERERERERLKRET--------------VVGTQTRARAHT 104
Q +R+ KR RR+ER +R +ERER +R V+ R+
Sbjct: 512 ERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSDNDRSLLER 571
Query: 105 HTQTHRHTHTPITD----TDIQQVTPTPRQPLKLPGSSLRDYEPPVRQQPTGTQGDLSLT 160
T+ R +T TPTP QP P + P Q T G +
Sbjct: 572 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 631
Query: 161 SQGRHFWGDSPAHRPRTPEAGIPRCLPGDLSEVSSSWGFFLLVDPPRIPASGDRPGNCP 219
+ PA P P IP P ++ +S LV PP +P S PG P
Sbjct: 632 ACP----PPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGS-STPGVLP 685
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 57.0 bits (136), Expect = 1e-08
Identities = 63/239 (26%), Positives = 86/239 (35%), Gaps = 27/239 (11%)
Query: 3 TLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHT-- 60
TL P +P PP K NT+A + + R R+ S PR+ T
Sbjct: 452 TLQPPPPVSEPAPPKKDGAISDNTKAALKAALLKSLRSRLRDGPSAPLEAPEPRKPVTAQ 511
Query: 61 --QTDRDRKRGRRKEREGREGERERERERLKRET--------------VVGTQTRARAHT 104
Q +R+ KR RR+ER +R +ERER +R V+ R+
Sbjct: 512 ERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSDNDRSLLER 571
Query: 105 HTQTHRHTHTPITD----TDIQQVTPTPRQPLKLPGSSLRDYEPPVRQQPTGTQGDLSLT 160
T+ R +T TPTP QP P + P Q T G +
Sbjct: 572 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 631
Query: 161 SQGRHFWGDSPAHRPRTPEAGIPRCLPGDLSEVSSSWGFFLLVDPPRIPASGDRPGNCP 219
+ PA P P IP P ++ +S LV PP +P S PG P
Sbjct: 632 ACP----PPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGS-STPGVLP 685
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 57.0 bits (136), Expect = 1e-08
Identities = 63/239 (26%), Positives = 86/239 (35%), Gaps = 27/239 (11%)
Query: 3 TLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHT-- 60
TL P +P PP K NT+A + + R R+ S PR+ T
Sbjct: 452 TLQPPPPVSEPAPPKKDGAISDNTKAALKAALLKSLRSRLRDGPSAPLEAPEPRKPVTAQ 511
Query: 61 --QTDRDRKRGRRKEREGREGERERERERLKRET--------------VVGTQTRARAHT 104
Q +R+ KR RR+ER +R +ERER +R V+ R+
Sbjct: 512 ERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSDNDRSLLER 571
Query: 105 HTQTHRHTHTPITD----TDIQQVTPTPRQPLKLPGSSLRDYEPPVRQQPTGTQGDLSLT 160
T+ R +T TPTP QP P + P Q T G +
Sbjct: 572 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 631
Query: 161 SQGRHFWGDSPAHRPRTPEAGIPRCLPGDLSEVSSSWGFFLLVDPPRIPASGDRPGNCP 219
+ PA P P IP P ++ +S LV PP +P S PG P
Sbjct: 632 ACP----PPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGS-STPGVLP 685
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 57.0 bits (136), Expect = 1e-08
Identities = 63/239 (26%), Positives = 86/239 (35%), Gaps = 27/239 (11%)
Query: 3 TLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHT-- 60
TL P +P PP K NT+A + + R R+ S PR+ T
Sbjct: 313 TLQPPPPVSEPAPPKKDGAISDNTKAALKAALLKSLRSRLRDGPSAPLEAPEPRKPVTAQ 372
Query: 61 --QTDRDRKRGRRKEREGREGERERERERLKRET--------------VVGTQTRARAHT 104
Q +R+ KR RR+ER +R +ERER +R V+ R+
Sbjct: 373 ERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSDNDRSLLER 432
Query: 105 HTQTHRHTHTPITD----TDIQQVTPTPRQPLKLPGSSLRDYEPPVRQQPTGTQGDLSLT 160
T+ R +T TPTP QP P + P Q T G +
Sbjct: 433 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 492
Query: 161 SQGRHFWGDSPAHRPRTPEAGIPRCLPGDLSEVSSSWGFFLLVDPPRIPASGDRPGNCP 219
+ PA P P IP P ++ +S LV PP +P S PG P
Sbjct: 493 ACP----PPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGS-STPGVLP 546
>gi|169211171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 55.5 bits (132), Expect = 4e-08
Identities = 26/44 (59%), Positives = 28/44 (63%)
Query: 154 QGDLSLTSQGRHFWGDSPAHRPRTPEAGIPRCLPGDLSEVSSSW 197
Q D SL S+G FWGDSP HRP PEAG+P P VSSSW
Sbjct: 2 QADRSLRSRGHDFWGDSPEHRPGRPEAGMPCRFPRTSPVVSSSW 45
>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 55.5 bits (132), Expect = 4e-08
Identities = 45/113 (39%), Positives = 55/113 (48%), Gaps = 17/113 (15%)
Query: 9 QTPKPEPPG-KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRK 67
Q PK +PP KRL G TQ ET+ EA Q++ R A G P+ THT T +
Sbjct: 21 QAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAM-RQTALWRTGHIRPK-THTHTGIHTQ 78
Query: 68 RGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHT-----HTP 115
R +ER +R R+R +RE T T HTHT T RHT HTP
Sbjct: 79 THRERERN-----TQRLRDRERRENGRHTHT----HTHTHTQRHTAEALKHTP 122
>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 113
Score = 54.7 bits (130), Expect = 6e-08
Identities = 43/112 (38%), Positives = 53/112 (47%), Gaps = 30/112 (26%)
Query: 10 TPKPEPPGKR-LPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR-----THTQTD 63
TPK E ++ L TG TQAE + +A Q++ R A G PR THTQTD
Sbjct: 21 TPKAETRRRKGLTTGLMTQAERQKQAHQRQAAM-RETALWCTGHIRPRTHTHTGTHTQTD 79
Query: 64 RDRKRG--RRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTH 113
R+R+R R ++RE RE R HTHT THRHTH
Sbjct: 80 RERERNTQRLRDRERRENGR---------------------HTHTYTHRHTH 110
Score = 28.5 bits (62), Expect = 5.0
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 59 HTQTDRDRKRGRRKEREGREGERERE---RERLKRETVVGTQTRARAHTHTQTHRHTHT 114
HT R+R + ER+++ R+ RET + R THT T HT T
Sbjct: 20 HTPKAETRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQT 78
>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 53.9 bits (128), Expect = 1e-07
Identities = 43/122 (35%), Positives = 57/122 (46%), Gaps = 25/122 (20%)
Query: 2 PTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR---- 57
P L +P P+ P L GH TQAET+ A Q++ R A G P+
Sbjct: 18 PGLHKPKVEPRQRKP---LTAGHRTQAETQKGAHQRQAAM-REIALCCTGHIRPKTHLHT 73
Query: 58 -THTQTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTH---RHTH 113
THTQTDR+R+R +R R+RER + G T+ +THTQ+H H
Sbjct: 74 GTHTQTDRERERNT---------QRLRDRERREN----GRHTQTYTYTHTQSHTAVAQKH 120
Query: 114 TP 115
TP
Sbjct: 121 TP 122
>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 53.9 bits (128), Expect = 1e-07
Identities = 43/122 (35%), Positives = 57/122 (46%), Gaps = 25/122 (20%)
Query: 2 PTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR---- 57
P L +P P+ P L GH TQAET+ A Q++ R A G P+
Sbjct: 18 PGLHKPKVEPRQRKP---LTAGHRTQAETQKGAHQRQAAM-REIALCCTGHIRPKTHLHT 73
Query: 58 -THTQTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTH---RHTH 113
THTQTDR+R+R +R R+RER + G T+ +THTQ+H H
Sbjct: 74 GTHTQTDRERERNT---------QRLRDRERREN----GRHTQTYTYTHTQSHTAVAQKH 120
Query: 114 TP 115
TP
Sbjct: 121 TP 122
>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 53.9 bits (128), Expect = 1e-07
Identities = 43/122 (35%), Positives = 57/122 (46%), Gaps = 25/122 (20%)
Query: 2 PTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR---- 57
P L +P P+ P L GH TQAET+ A Q++ R A G P+
Sbjct: 18 PGLHKPKVEPRQRKP---LTAGHRTQAETQKGAHQRQAAM-REIALCCTGHIRPKTHLHT 73
Query: 58 -THTQTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTH---RHTH 113
THTQTDR+R+R +R R+RER + G T+ +THTQ+H H
Sbjct: 74 GTHTQTDRERERNT---------QRLRDRERREN----GRHTQTYTYTHTQSHTAVAQKH 120
Query: 114 TP 115
TP
Sbjct: 121 TP 122
>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 53.9 bits (128), Expect = 1e-07
Identities = 43/107 (40%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 9 QTPKPEPPG-KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRK 67
Q PK +PP KRL G TQ ET+ EA Q++ R A G P+ THT T +
Sbjct: 21 QAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAM-RQTALWRTGHIRPK-THTHTGIHTQ 78
Query: 68 RGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHT 114
R +ER +R R+R +RET G T H HTQTH HT
Sbjct: 79 THRERERN-----TQRLRDRERRET--GRHT----HRHTQTHTQRHT 114
>gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 131
Score = 53.1 bits (126), Expect = 2e-07
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 18 KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPR-RTHTQTDRDRKRGRRKEREG 76
K+L TG TQAET+ EA Q R+A P + T R +THT + R++ER
Sbjct: 31 KQLTTGLMTQAETQKEAHQ---RQAAMPETVLWCTGHIRPKTHTHKGTHAQTHRKRERN- 86
Query: 77 REGERERERERLKRETVVGTQTRARAHTHTQTHRHTHT 114
+R R+R +RE T T HTHT TH+HT +
Sbjct: 87 ----TQRLRDRERRENGRHTHTHTDTHTHTHTHKHTES 120
>gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo
sapiens]
Length = 131
Score = 53.1 bits (126), Expect = 2e-07
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 18 KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPR-RTHTQTDRDRKRGRRKEREG 76
K+L TG TQAET+ EA Q R+A P + T R +THT + R++ER
Sbjct: 31 KQLTTGLMTQAETQKEAHQ---RQAAMPETVLWCTGHIRPKTHTHKGTHAQTHRKRERN- 86
Query: 77 REGERERERERLKRETVVGTQTRARAHTHTQTHRHTHT 114
+R R+R +RE T T HTHT TH+HT +
Sbjct: 87 ----TQRLRDRERRENGRHTHTHTDTHTHTHTHKHTES 120
>gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo
sapiens]
Length = 174
Score = 53.1 bits (126), Expect = 2e-07
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 18 KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPR-RTHTQTDRDRKRGRRKEREG 76
K+L TG TQAET+ EA Q R+A P + T R +THT + R++ER
Sbjct: 31 KQLTTGLMTQAETQKEAHQ---RQAAMPETVLWCTGHIRPKTHTHKGTHAQTHRKRERN- 86
Query: 77 REGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPI 116
+R R+R +RE T T HTHT TH+HT +
Sbjct: 87 ----TQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEKEV 122
>gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 174
Score = 53.1 bits (126), Expect = 2e-07
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 18 KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPR-RTHTQTDRDRKRGRRKEREG 76
K+L TG TQAET+ EA Q R+A P + T R +THT + R++ER
Sbjct: 31 KQLTTGLMTQAETQKEAHQ---RQAAMPETVLWCTGHIRPKTHTHKGTHAQTHRKRERN- 86
Query: 77 REGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPI 116
+R R+R +RE T T HTHT TH+HT +
Sbjct: 87 ----TQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEKEV 122
>gi|239752497 PREDICTED: similar to family with sequence similarity
27, member D1, partial [Homo sapiens]
Length = 122
Score = 51.6 bits (122), Expect = 5e-07
Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 10 TPKPE-PPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRKR 68
TPK + P KRL G TQAE EA Q++ R A G P+ THT T +
Sbjct: 22 TPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAM-RQTALWRTGHIWPK-THTHTGIHTQT 79
Query: 69 GRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHT 114
R +ER + R+RER +R T HTHT+TH +HT
Sbjct: 80 HRERERNTQR-LRDRERREWERHT--------HTHTHTETHTQSHT 116
>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
sapiens]
Length = 122
Score = 51.2 bits (121), Expect = 7e-07
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 2 PTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQ 61
P L R P+ + KRL TG TQAET+ EA Q++ R A G P+ THT
Sbjct: 18 PGLHRAKADPQQQ---KRLTTGLMTQAETQKEAQQRQAAM-RKTALWHTGHLQPK-THTH 72
Query: 62 TDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHT 114
T + R +ER +R R+R +RE HTHT+TH HT
Sbjct: 73 TGMHTQTHRERERN-----TQRLRDRERREN----------HTHTETHTQRHT 110
>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
sapiens]
Length = 124
Score = 50.8 bits (120), Expect = 9e-07
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 2 PTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQ 61
P L R P+ + KRL TG TQAET+ EA Q++ R A G P +THT
Sbjct: 18 PGLHRAKADPQQQ---KRLTTGLMTQAETQKEAQQRQA-AMRKTALWHTGHLQP-KTHTH 72
Query: 62 TDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHT 114
T + R +ER +R R+R +RE HTHT+TH HT
Sbjct: 73 TGMHTQTHRERER-----NTQRLRDRERREN--------GRHTHTETHTQRHT 112
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 49.7 bits (117), Expect = 2e-06
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Query: 27 QAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRKRGRRKEREGREGERERERE 86
Q ++ +KKG R +P + + + + + R K R+G++ R+ ER+
Sbjct: 248 QRNSKTNQSKKKGPRTPSPPPPIPEDIALGKKYKEKYKVKDRIEEKTRDGKDRGRDFERQ 307
Query: 87 RLKRETVVGTQTRARAHTHTQTHRHTHTPITDTDIQQVTPTPRQPLKLPGSSLRDYEPPV 146
R KR+ T + H+ + H+ + + + IQ+ +P+PR+ S R PP+
Sbjct: 308 REKRDKPRSTSPAGQHHSPISSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQRTLTPPL 367
Query: 147 RQQPTGTQGDLSLTSQGRHFWGDSPAHRPRTPEAG 181
R+ + SL+S R P HR E G
Sbjct: 368 RRSASPYPSH-SLSSPQRK--QSPPRHRSPMREKG 399
Score = 39.7 bits (91), Expect = 0.002
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 56 RRTHTQTDRDRKRGRRKEREGREGERERERER 87
R + +RDR++ R +ERE RE ERERERER
Sbjct: 735 RERERERERDREKEREREREERERERERERER 766
Score = 38.5 bits (88), Expect = 0.005
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 56 RRTHTQTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRAR 101
RR +RDR+R R +ERE RE ERER+RER K + + R R
Sbjct: 671 RRDERARERDRERERDRERE-RERERERDREREKERELERERARER 715
Score = 37.0 bits (84), Expect = 0.014
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 61 QTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARA 102
+ +R+R+R R KERE ERERERER + + R RA
Sbjct: 736 ERERERERDREKEREREREERERERERERERERERERERERA 777
Score = 35.8 bits (81), Expect = 0.031
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 12/105 (11%)
Query: 6 RPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRD 65
RPS + + L + D ++ RAR R + DR+
Sbjct: 640 RPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARE-----------RDRERERDRE 688
Query: 66 RKRGRRKEREG-REGERERERERLKRETVVGTQTRARAHTHTQTH 109
R+R R +ER+ RE ERE ERER + + R R + H
Sbjct: 689 RERERERERDREREKERELERERAREREREREKERDRERDRDRDH 733
Score = 35.8 bits (81), Expect = 0.031
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 56 RRTHTQTDRDRKRGRRKEREGREGERERERERLKRE 91
R D DR+R R +ER+ RE ERERERE +RE
Sbjct: 725 RERDRDRDHDRERERERERD-REKEREREREERERE 759
Score = 35.8 bits (81), Expect = 0.031
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 56 RRTHTQTDRDRKRGRRKEREGREGERERERER 87
R + DR+++R R +E RE ERERERER
Sbjct: 737 RERERERDREKEREREREERERERERERERER 768
Score = 35.8 bits (81), Expect = 0.031
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 61 QTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRAR 101
+ +R+R R + +ERE E ERERERER + + RAR
Sbjct: 738 ERERERDREKEREREREERERERERERERERERERERERAR 778
Score = 33.5 bits (75), Expect = 0.15
Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 20/147 (13%)
Query: 5 PRPSQTPKPE------PPGKRLPT---GHNTQAETRGEAD-------QKKGRRARNPASG 48
PR +TP P PP +R + H+ + R ++ ++KGR S
Sbjct: 349 PRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRHRSPMREKGRHDHERTSQ 408
Query: 49 AQGTCVPRRTHTQTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQT 108
+ RR T+ RDR++ R+ERE + + R RE G R T +
Sbjct: 409 SHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRR 468
Query: 109 HRHTHTPITDT----DIQQVTPTPRQP 131
+ D+ D + T R P
Sbjct: 469 ELRDSRDMRDSREMRDYSRDTKESRDP 495
Score = 32.0 bits (71), Expect = 0.45
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 33 EADQKKGRRARNPASGAQGTCVPRRTHTQTDR--DRKRGRRKEREGREGERERERER 87
E DQ+ R+ + RR + DR DR+ R +ER+ RE ER+RERER
Sbjct: 636 ERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERD-RERERDRERER 691
Score = 31.6 bits (70), Expect = 0.59
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 13/121 (10%)
Query: 27 QAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRKRGRRKEREGREGERERERE 86
Q R E D+++ R R+ R+ D D+ R ++R+ R ERERERE
Sbjct: 1300 QERDRYEHDRERERERRDT----------RQREWDRDADKDWPRNRDRD-RLRERERERE 1348
Query: 87 RLKRETVVGTQTRARAHTHTQTHRHTHTPITDTDIQQVTPTPRQPLKLPGSSLRDYEPPV 146
R KR + + R R + + + Q+ R KL G RD E
Sbjct: 1349 RDKRRDL--DRERERLISDSVERDRDRDRDRTFESSQIESVKRCEAKLEGEHERDLESTS 1406
Query: 147 R 147
R
Sbjct: 1407 R 1407
Score = 30.8 bits (68), Expect = 1.00
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 29 ETRGEADQ-KKGRRARNPASGAQGTCV----------PRRTHTQTDRDRKRGRRKEREGR 77
E + DQ K+G +R+ +S Q + R+ H+++ R R +ER+
Sbjct: 1246 ERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRY 1305
Query: 78 EGERERERER 87
E +RERERER
Sbjct: 1306 EHDRERERER 1315
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 56 RRTHTQTDRDRKRGRRKEREGREGERERERER 87
R + +R+++R R ++R+ R+ +RERERER
Sbjct: 711 RAREREREREKERDRERDRD-RDHDRERERER 741
Score = 28.5 bits (62), Expect = 5.0
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 24 HNTQAETRGEADQKKGR-RARNPASGAQGTCVPRRTHTQTDRDRKRG----RRKEREGRE 78
H+ + E E D++K R R R + R + +R+R R R ++R+ +
Sbjct: 733 HDRERERERERDREKEREREREERERERERERERERERERERERARERDKERERQRDWED 792
Query: 79 GERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPITDTDIQQVTPTPRQPLK 133
++ R+ R KRE + + H ++ + + +P+PRQ K
Sbjct: 793 KDKGRDDRREKREEIREDRNPRDGHDERKSKKRYR--------NEGSPSPRQSPK 839
>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
sapiens]
Length = 125
Score = 47.0 bits (110), Expect = 1e-05
Identities = 44/117 (37%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 2 PTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQ 61
P L R P+ + KRL TG TQAET+ EA Q++ R A G P +THT
Sbjct: 18 PGLHRAKADPQQQ---KRLTTGLMTQAETQKEAQQRQA-AMRKTALWHTGHLQP-KTHTH 72
Query: 62 TDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRH---THTP 115
T + R +ER +R R+R +RE G T R THTQ H HTP
Sbjct: 73 TGMHTQTHRERER-----NTQRLRDRERREN--GRHTH-RHTTHTQRHTEEALKHTP 121
>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 122
Score = 45.4 bits (106), Expect = 4e-05
Identities = 42/117 (35%), Positives = 52/117 (44%), Gaps = 35/117 (29%)
Query: 12 KPEPPG-KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR-----THTQTDRD 65
K +P G KRL TG TQAET+ E Q++ + A G P+ THTQT R+
Sbjct: 24 KADPRGRKRLTTGLMTQAETQKEVQQRQA-AMQETALWFTGHIQPKTHKHTGTHTQTHRE 82
Query: 66 RKRG--RRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHT-----HTP 115
+R R ++RE RE R HTHTQT HT HTP
Sbjct: 83 WERNTQRLRDRERRENGR---------------------HTHTQTKGHTAEALKHTP 118
>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
sapiens]
Length = 122
Score = 45.4 bits (106), Expect = 4e-05
Identities = 42/117 (35%), Positives = 52/117 (44%), Gaps = 35/117 (29%)
Query: 12 KPEPPG-KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR-----THTQTDRD 65
K +P G KRL TG TQAET+ E Q++ + A G P+ THTQT R+
Sbjct: 24 KADPRGRKRLTTGLMTQAETQKEVQQRQA-AMQETALWFTGHIQPKTHKHTGTHTQTHRE 82
Query: 66 RKRG--RRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHT-----HTP 115
+R R ++RE RE R HTHTQT HT HTP
Sbjct: 83 WERNTQRLRDRERRENGR---------------------HTHTQTKGHTAEALKHTP 118
>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
sapiens]
Length = 122
Score = 45.4 bits (106), Expect = 4e-05
Identities = 42/117 (35%), Positives = 52/117 (44%), Gaps = 35/117 (29%)
Query: 12 KPEPPG-KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR-----THTQTDRD 65
K +P G KRL TG TQAET+ E Q++ + A G P+ THTQT R+
Sbjct: 24 KADPRGRKRLTTGLMTQAETQKEVQQRQA-AMQETALWFTGHIQPKTHKHTGTHTQTHRE 82
Query: 66 RKRG--RRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHT-----HTP 115
+R R ++RE RE R HTHTQT HT HTP
Sbjct: 83 WERNTQRLRDRERRENGR---------------------HTHTQTKGHTAEALKHTP 118
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 43.9 bits (102), Expect = 1e-04
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 29/183 (15%)
Query: 6 RPSQTPKPEPPGK--RLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTD 63
R S++P E + R P ++++R +++++ R++R+P+ +
Sbjct: 522 RRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSK---------------E 566
Query: 64 RDRKRGR-----RKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPITD 118
RDR+R R R+ R+ R ER+ R + +R RA + + H + TP +
Sbjct: 567 RDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKE 626
Query: 119 TDIQQVTPTPRQPLKLPGSSLRDYEPPVRQQPTGTQGDLSLTSQGRHFWGDSPAHRPRTP 178
+ Q + ++ P S P ++ PT T S SQ R + +H P T
Sbjct: 627 GNHSQSRTSSKE--SDPSQSTVPRSPDWKRSPTRT----SSLSQNR-TPSKTSSHSPSTF 679
Query: 179 EAG 181
+G
Sbjct: 680 PSG 682
Score = 32.0 bits (71), Expect = 0.45
Identities = 20/102 (19%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 19 RLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRKRGRRKEREGRE 78
R P+ ++ + ++ RR+R+P+ Q C R+ ++ R R R
Sbjct: 477 RSPSKERDHSQLGSPSKERDHRRSRSPSKERQ--CRQSRSSSK--------ERDHRRSRS 526
Query: 79 GERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPITDTD 120
+ER+R + + ++++R+ + + HR + +P + D
Sbjct: 527 PSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERD 568
Score = 29.6 bits (65), Expect = 2.2
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 5 PRPSQTPKPEPPGKRLPTGHN-----TQAETRGEADQKKGRRARNPASGAQGTCVPRRTH 59
P PS + K + G+ + T+ +R ++ + R+R P S +Q PRR+
Sbjct: 234 PSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSR-PQSHSQSRS-PRRSR 291
Query: 60 TQTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTP 115
+ + + R R R R R R + +G +++R+H+ ++ + TP
Sbjct: 292 SGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTP 347
Score = 29.3 bits (64), Expect = 2.9
Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Query: 8 SQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRT-HTQTDRDR 66
S +P + R + + + +R + K R+R+ + C R+ + DR R
Sbjct: 392 SGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSR 451
Query: 67 KRGRRKERE---GREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPITDTDIQQ 123
R K R+ R + R+R R + + ++ + + + HR + +P + +Q
Sbjct: 452 SRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQ 511
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 43.5 bits (101), Expect = 1e-04
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 23 GHNTQAETRGEADQKKGRRA--RNPASGAQGTCVPRRTHTQTDRDRKRGRRKERE----- 75
G +T ET Q++ RR R + R + RDR+R R ++R+
Sbjct: 7 GRHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREK 66
Query: 76 --GREGERERERER---LKRETVVGTQTRARAHTHTQTHRHTHTPITDTDIQQVTPTPRQ 130
REGER+RERER +RET HT+T R + ++++V R+
Sbjct: 67 QTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQ-KEREMERVRDRERE 125
Query: 131 PLKLPG 136
K G
Sbjct: 126 KQKEMG 131
Score = 40.0 bits (92), Expect = 0.002
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 56 RRTHTQTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHT 114
R Q +R+R+ GR ++ E R ERERER+R +RE T+ R R HT + R T
Sbjct: 142 RERERQAERERETGRERKTEDRHRERERERKR-ERERKRETKERER-HTDMERERQRET 198
Score = 36.6 bits (83), Expect = 0.018
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 27 QAETRGEADQKKGRRA-RNPASGAQGTCVPRRTHTQTDRDRKRGRRKEREGREGER---- 81
+ +T E D+++ R+A R +G + R H + +R+RKR R ++RE +E ER
Sbjct: 133 ERQTDRETDRERERQAERERETGRERKTEDR--HRERERERKRERERKRETKERERHTDM 190
Query: 82 ERERER 87
ERER+R
Sbjct: 191 ERERQR 196
Score = 34.3 bits (77), Expect = 0.090
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 27 QAETRGEADQKKGRRARNPASGAQGTCVPRRT--HTQTDRDRKRGRRKEREG-REGERER 83
Q + GE +++ R + R T HT+TDR+R++ + +E E R+ ERE+
Sbjct: 67 QTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDREREK 126
Query: 84 ERERLKRETVVGTQTRARAHTHTQTHRHT 112
++E + RE +T + R T
Sbjct: 127 QKE-MGRERQTDRETDRERERQAERERET 154
Score = 28.1 bits (61), Expect = 6.5
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 22 TGHNTQAETRG---EADQKKGR-RARNPASGAQGTCVPRRTHTQTDRDRKRGRRKERE 75
TG + E R E ++K+ R R R + T + R +TDR R R R ERE
Sbjct: 154 TGRERKTEDRHRERERERKRERERKRETKERERHTDMERERQRETDRKRDRQRESERE 211
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 42.0 bits (97), Expect = 4e-04
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 19/113 (16%)
Query: 31 RGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDR----KRGRRKERE---GREGERER 83
RG Q G+R R A+ + QTDR+R +R R+KERE R+ RER
Sbjct: 137 RGRDRQTDGQRERERQRDAE-----KERERQTDRERQRQTERNRQKEREREKNRQERRER 191
Query: 84 ERERLK------RETVVGTQTRARAHTHTQTHRHTHTPITDTDIQQVTPTPRQ 130
ER+R K R + G + T T+T R T + D Q+ T R+
Sbjct: 192 ERQREKENKTEDRHSERGRERERERETETETERKRQTD-RERDRQRKTERERE 243
Score = 40.8 bits (94), Expect = 0.001
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 27 QAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRKRGRRKEREGREGERERERE 86
Q E + D+K+ RR + R + +R+R+R R++ERE RE ERERER+
Sbjct: 276 QKERERQTDRKRQRRTERDRETER----KRERQRERERERERNRKRERE-RERERERERQ 330
Query: 87 R-LKRETVVGTQTRARAHTHTQTHRHTHT 114
R +R+ + + + T R+ T
Sbjct: 331 RETERDREKERERKRKRQTEMDRERNRQT 359
Score = 40.8 bits (94), Expect = 0.001
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 26 TQAETRGEADQKKGR-----RARNPASGAQGTCVPRRTHTQTDRDRKRGRRKEREGREGE 80
T+ + E ++K+ R R RN +G +G R+ + +R+R+R R+ RE E E
Sbjct: 333 TERDREKERERKRKRQTEMDRERNRQTGREGR---RQAERERERERERDRQSAREREERE 389
Query: 81 RERERERLK-RETVVGTQTRARAHTHTQTHR 110
R+R+R+R K RE + T Q R
Sbjct: 390 RDRDRDRQKERERQTEKDRDGQRETEKQRER 420
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 56 RRTHTQTDRDRKRGRRKEREG-REGERERERERLK-RETVVGTQTRARAHTHTQTHRHTH 113
R+ QT+ DR+R R+ REG R+ ERERERER + R++ + R R +
Sbjct: 343 RKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERER 402
Query: 114 TPITDTDIQQVTPTPRQ 130
D D Q+ T R+
Sbjct: 403 QTEKDRDGQRETEKQRE 419
Score = 38.1 bits (87), Expect = 0.006
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 26 TQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRKRGRRKEREGREGERERER 85
T+ E + + D+++ R+ + + R + +T+RD++R R ++R+ R++ER
Sbjct: 220 TETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKER 279
Query: 86 ERLKRETVVGTQTRARAHTHTQTHRHT 112
ER QT + T+ R T
Sbjct: 280 ER---------QTDRKRQRRTERDRET 297
Score = 37.7 bits (86), Expect = 0.008
Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 20/156 (12%)
Query: 27 QAETRGEADQKKGRRARNPASGAQGTCVPR-----RTHTQTDRDRKRGRRKERE-----G 76
Q E E +++ GR R A + R R + +RDR R R+KERE
Sbjct: 348 QTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKD 407
Query: 77 REGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPITDTDIQQVTPTPRQPLKLPG 136
R+G+RE E++R + + + R R + TD Q R L +
Sbjct: 408 RDGQRETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYV-- 465
Query: 137 SSLRDYEPPVRQQPTG-TQGDLSLTSQGRHFWGDSP 171
PP R +G Q D + ++G W SP
Sbjct: 466 ------NPPPRTARSGVVQSDPNRPTRGIR-WKSSP 494
Score = 37.0 bits (84), Expect = 0.014
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 6 RPSQTPKPEPPGKRLPTGH-NTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDR 64
RP P G L H + + R QK+ R R + T R + DR
Sbjct: 30 RPGSQESPRRRG--LGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDR 87
Query: 65 DRKRGRRKERE-GREGERERERER 87
RKR R +ER+ RE ERER+ +R
Sbjct: 88 HRKRDRHRERQRDREKERERQTDR 111
Score = 36.6 bits (83), Expect = 0.018
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 13/111 (11%)
Query: 29 ETRGEADQKKGRRARNPASGAQGTCVPRRT------HTQTDRDRKRGRRKER---EGREG 79
+T E D+K+ RR + R+ QTDR+R R R KER + RE
Sbjct: 70 QTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERER 129
Query: 80 ERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPITDTDIQQVTPTPRQ 130
E ERE ER + G + R R + TD + Q+ T RQ
Sbjct: 130 ETEREGERGRDRQTDGQRERERQRDAEKERERQ----TDRERQRQTERNRQ 176
Score = 36.2 bits (82), Expect = 0.024
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Query: 3 TLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQT 62
T R S+ + + T + +T E D+++ + R T
Sbjct: 201 TEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDK 260
Query: 63 DRDRKRGRRKEREGREGERERERERLK-RETVVGTQTRARAHTHTQTHR 110
+R+R+R R ++R+ R+ ERER+ +R + R T +T + + R
Sbjct: 261 ERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERER 309
Score = 34.7 bits (78), Expect = 0.069
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 41 RARNPASGAQGTCVPRRTHTQTDRDRKRGRRKER-----EGREGERERERERLKRETVVG 95
R RN + R+T +TDR R+R R K+R RE +R+RE+ER +R+T
Sbjct: 54 RERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKER-ERQTDRE 112
Query: 96 TQTRARAHTHTQTHRHTHT 114
+ + Q R T
Sbjct: 113 RDRQREKERNRQKERERET 131
Score = 33.1 bits (74), Expect = 0.20
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 56 RRTHTQTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTP 115
R+ + DRKR RR ER+ RE ER+RER+R + + R R +
Sbjct: 275 RQKERERQTDRKRQRRTERD-RETERKRERQRERERERERNRKRERERERERERERQRET 333
Query: 116 ITDTDIQQVTPTPRQ 130
D + ++ RQ
Sbjct: 334 ERDREKERERKRKRQ 348
Score = 32.7 bits (73), Expect = 0.26
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 22 TGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRKRGRRKEREGREGER 81
T Q T + + ++ R + + R + +R+R+R R ER+ RE ER
Sbjct: 283 TDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERD-REKER 341
Query: 82 ERERER-----LKRETVVGTQTRARAHTHTQTHR 110
ER+R+R +R G + R +A + R
Sbjct: 342 ERKRKRQTEMDRERNRQTGREGRRQAERERERER 375
Score = 32.3 bits (72), Expect = 0.34
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 65 DRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRH 111
DR+R R+KERE R RE+ + +RET + R H + RH
Sbjct: 53 DRERNRQKERE-----RRREKRQTERETDRKRERRREKDRHRKRDRH 94
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 25 NTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRKRGRRKERE-----GREG 79
N Q E ++K + + S +G R T+T+ +RKR +ER+ RE
Sbjct: 184 NRQERRERERQREKENKTEDRHS-ERGRERERERETETETERKRQTDRERDRQRKTERER 242
Query: 80 ERERERERL-KRET 92
E++ ERER +RET
Sbjct: 243 EKQAERERASERET 256
Score = 29.6 bits (65), Expect = 2.2
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 61 QTDRDRKRGRRKEREG-REGERERERERLKRETVVGTQTRARAHTHTQTHR 110
+T+R+ +RGR ++ +G RE ER+R+ E+ +RE + + + + Q R
Sbjct: 130 ETEREGERGRDRQTDGQRERERQRDAEK-ERERQTDRERQRQTERNRQKER 179
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 57 RTHTQTDRDRKRGRRKEREGREGERERERE-----RLKRETVVGTQTRARAHTHTQTHRH 111
R + Q +R+R+R R +ERE R+ ERERERE +R + RA+ + HR
Sbjct: 410 RENRQRERERERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEKDRQHRD 469
Query: 112 THTPITDTDIQQVTPTPRQPLKLPGSSLRDYEPPVRQQPT 151
+ + ++ P PR P P S R EPP ++ T
Sbjct: 470 RDRE-KEREKEKGKPKPRSP--QPPS--RQAEPPKKEAAT 504
Score = 36.6 bits (83), Expect = 0.018
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 55 PRRTHTQTDRDRKRGRRKEREGREGERERERERLKRE 91
P + + +R+R+R R+ RE ER+RERER +RE
Sbjct: 397 PYHNYRERERERERENRQRERERERERDRERERRQRE 433
Score = 33.5 bits (75), Expect = 0.15
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 27 QAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRKRGRRKEREGREGERERERE 86
+ E E D+++ RR R + R + + +R+R +R E++ + +R+RE+E
Sbjct: 416 ERERERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEKDRQHRDRDREKE 475
Query: 87 RLKRE 91
R K +
Sbjct: 476 REKEK 480
Score = 32.7 bits (73), Expect = 0.26
Identities = 44/202 (21%), Positives = 65/202 (32%), Gaps = 28/202 (13%)
Query: 5 PRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQT-D 63
P PS TP P P R A G+A +K ++ P + Q T T
Sbjct: 606 PSPSPTPSPHRPSIRT---KGEPAPPPGKAGEKSVKKPAPPPAPPQATKTTAPVPEPTKP 662
Query: 64 RDRKRGRRKEREGREGERER-----------------ERERLKRETVV-----GTQTRAR 101
D + RRKER R R R R R + V T + +
Sbjct: 663 GDPREARRKERPARTPPRRRTLSGSGSGSGSSYSGSSSRSRSLSVSSVSSVSSATSSSSS 722
Query: 102 AHTHTQTHRHTHTPITDTDIQQVTPTPRQPLKLPGSSLRDYEPPVRQQPTGTQGDLSLTS 161
AH+ + + +P P Q K G S + E V+++
Sbjct: 723 AHSVDSEDMYADLASPVSSASSRSPAPAQTRKEKGKSKK--EDGVKEEKRKRDSSTQPPK 780
Query: 162 QGRHFWGDSPAHRPRTPEAGIP 183
+ G + +P TP+ P
Sbjct: 781 SAKPPAGGKSSQQPSTPQQAPP 802
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,573,956
Number of Sequences: 37866
Number of extensions: 742946
Number of successful extensions: 7068
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 269
Number of HSP's that attempted gapping in prelim test: 4213
Number of HSP's gapped (non-prelim): 1656
length of query: 228
length of database: 18,247,518
effective HSP length: 99
effective length of query: 129
effective length of database: 14,498,784
effective search space: 1870343136
effective search space used: 1870343136
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.