Search of human proteins with 239743007

Search of human proteins with 239743007

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239743007 PREDICTED: hypothetical protein XP_002342717 [Homo
sapiens]
         (123 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239748987 PREDICTED: hypothetical protein [Homo sapiens]           261   1e-70
gi|239743007 PREDICTED: hypothetical protein XP_002342717 [Homo ...   261   1e-70
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso...    38   0.002
gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isof...    38   0.002
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    37   0.003
gi|33286446 opioid growth factor receptor [Homo sapiens]               37   0.004
gi|71043876 undifferentiated embryonic cell transcription factor...    37   0.005
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     37   0.005
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]            36   0.006
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]            36   0.006
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]         36   0.008
gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4 ...    35   0.011
gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2 ...    35   0.011
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    35   0.011
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    35   0.011
gi|169211642 PREDICTED: hypothetical protein [Homo sapiens]            35   0.011
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    35   0.011
gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo s...    35   0.011
gi|24308075 RAB11 family interacting protein 5 (class I) [Homo s...    35   0.014
gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]            35   0.014
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]            35   0.014
gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]            35   0.014
gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens]           35   0.014
gi|239750099 PREDICTED: hypothetical protein XP_002347292 [Homo ...    35   0.014
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]            35   0.014
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]            35   0.014
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]            35   0.014
gi|154355000 KH-type splicing regulatory protein [Homo sapiens]        35   0.014
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]            35   0.019
gi|239754611 PREDICTED: hypothetical protein [Homo sapiens]            35   0.019

>gi|239748987 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 123

 Score =  261 bits (666), Expect = 1e-70
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MLGPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGA 60
           MLGPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGA
Sbjct: 1   MLGPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGA 60

Query: 61  TLSEPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASPS 120
           TLSEPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASPS
Sbjct: 61  TLSEPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASPS 120

Query: 121 GSS 123
           GSS
Sbjct: 121 GSS 123


>gi|239743007 PREDICTED: hypothetical protein XP_002342717 [Homo
           sapiens]
          Length = 123

 Score =  261 bits (666), Expect = 1e-70
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MLGPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGA 60
           MLGPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGA
Sbjct: 1   MLGPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGA 60

Query: 61  TLSEPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASPS 120
           TLSEPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASPS
Sbjct: 61  TLSEPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASPS 120

Query: 121 GSS 123
           GSS
Sbjct: 121 GSS 123


>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
           isoform B' [Homo sapiens]
          Length = 240

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 34/114 (29%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 3   GPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATL 62
           G P P + PA L    RG GG + + +   G    +AA A + +S         +AGA  
Sbjct: 117 GVPMP-QAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATAS---------IAGAPT 166

Query: 63  SEPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRP 116
             P G G  G    + R   P    G  P   P   P    PP  GT   +P P
Sbjct: 167 QYPPGRG--GPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPP 218


>gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isoform
           B [Homo sapiens]
          Length = 231

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 34/114 (29%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 3   GPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATL 62
           G P P + PA L    RG GG + + +   G    +AA A + +S         +AGA  
Sbjct: 117 GVPMP-QAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATAS---------IAGAPT 166

Query: 63  SEPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRP 116
             P G G  G    + R   P    G  P   P   P    PP  GT   +P P
Sbjct: 167 QYPPGRG--GPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPP 218


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 9/122 (7%)

Query: 6    RPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEP 65
            R  + P     K  G+    G   P P  + P++ + P   +  + +    +    +  P
Sbjct: 1104 RGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQPPPAVAAPSEKNSIPIPTIIIKAP 1163

Query: 66   H--GSGRDGEASTLSRWQSPREDE----GGTPCSSPHQAPHFLAPPVSGTACPLPRPASP 119
                SGR  + S+    + P + E    GG   SSP  AP     PV  +  P+P PASP
Sbjct: 1164 STSSSGRSSQGSSTEA-EPPTQPEPTGGGGGGGSSPSPAPAM--SPVPPSPSPVPTPASP 1220

Query: 120  SG 121
            SG
Sbjct: 1221 SG 1222



 Score = 35.4 bits (80), Expect = 0.011
 Identities = 33/121 (27%), Positives = 46/121 (38%), Gaps = 10/121 (8%)

Query: 4    PPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRAR--RMGGVLAGAT 61
            PPR A  P    R  RG G       P P H G +     S   P  R  ++    A A 
Sbjct: 1036 PPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALRYFQLPPRAASAA 1095

Query: 62   LSEPHGSGRDGEASTLSRWQ---SPREDEGGTPCSSP-----HQAPHFLAPPVSGTACPL 113
            +  P  SGR  +   + + +    P++  G  P  SP      Q P  +A P    + P+
Sbjct: 1096 MYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQPPPAVAAPSEKNSIPI 1155

Query: 114  P 114
            P
Sbjct: 1156 P 1156


>gi|33286446 opioid growth factor receptor [Homo sapiens]
          Length = 677

 Score = 37.0 bits (84), Expect = 0.004
 Identities = 35/131 (26%), Positives = 46/131 (35%), Gaps = 10/131 (7%)

Query: 1   MLGPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSG-PSAARAPSRSSPRARRMGGVLAG 59
           + G P P+  P A   +   +    G+  P  G  G PS    PS + P         + 
Sbjct: 481 LAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSE 540

Query: 60  ATLSEPHGSGRDGEASTLSRWQSPRE--DEGGTPCSSPHQAPHFLA-------PPVSGTA 110
                P G   D  A + S    PR     G  P  SP + P           P  S + 
Sbjct: 541 TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSE 600

Query: 111 CPLPRPASPSG 121
            P PRPA P+G
Sbjct: 601 TPGPRPAGPAG 611



 Score = 31.2 bits (69), Expect = 0.21
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 12/93 (12%)

Query: 35  SGPSAARAPSRSSPRARRMGGVLAGATLSEPH---GSGRDGEASTLSRWQSPREDEGGTP 91
           +G SAA A   +   A      LAG+     H   G   +G          P+E   G+P
Sbjct: 465 AGDSAAVASGGAQTLA------LAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSP 518

Query: 92  CSSPHQAPHFLA---PPVSGTACPLPRPASPSG 121
             +P  +P   A   P  S +  P PRPA P+G
Sbjct: 519 SETPGPSPAGPAGDEPAESPSETPGPRPAGPAG 551


>gi|71043876 undifferentiated embryonic cell transcription factor 1
           [Homo sapiens]
          Length = 341

 Score = 36.6 bits (83), Expect = 0.005
 Identities = 41/124 (33%), Positives = 49/124 (39%), Gaps = 17/124 (13%)

Query: 4   PPRPAEKPAALDRKRRGQGGDNGKPLP---DPGHSGPSAARAPSRSSPRARRMGGVLAGA 60
           PP P ++     RK  G  GDNG+  P    PG   P  AR P    P A         A
Sbjct: 132 PPGPFDEQI---RKLMGLLGDNGRKRPRRRSPGSGRPQRARRP---VPNAHAPAPSEPDA 185

Query: 61  TLSEPHGSGRDGEAS---TLSRWQSPRE--DEGGTPCSSPHQAPHFLAPPVSGTACPLPR 115
           T   P  + RD +A    TL    SP +  D    P S P  AP  LA  +     P+  
Sbjct: 186 T---PLPTARDRDADPTWTLRFSPSPPKSADASPAPGSPPAPAPTALATCIPEDRAPVRG 242

Query: 116 PASP 119
           P SP
Sbjct: 243 PGSP 246


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 36.6 bits (83), Expect = 0.005
 Identities = 37/123 (30%), Positives = 45/123 (36%), Gaps = 13/123 (10%)

Query: 4   PPRPAEKPAALDRKRRGQGGDNGKPLPDPGHS-----GPSAARAPSRSSPRARRMGGVLA 58
           PPR    P A  R  RG         P P  +      P AA AP+R +PRA       A
Sbjct: 101 PPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPAR-APRA-----AAA 154

Query: 59  GATLSEPHGSGRDG-EASTLSRWQSPREDEGGTPCSSPHQAPHFLAPP-VSGTACPLPRP 116
            AT     G  + G  A   +   +P       P  +P   P    PP V+    PLP P
Sbjct: 155 AATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPP 214

Query: 117 ASP 119
             P
Sbjct: 215 PQP 217



 Score = 28.9 bits (63), Expect = 1.0
 Identities = 31/116 (26%), Positives = 37/116 (31%), Gaps = 17/116 (14%)

Query: 4   PPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLS 63
           PP P    A     R         P P P   GP A RA    +P A       A   ++
Sbjct: 136 PPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRA----APLAAPPPAPAAPPAVA 191

Query: 64  EPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASP 119
            P G  R    +  +R           P   P Q P   APP      P P+P  P
Sbjct: 192 PPAGPRRAPPPAVAAR---------EPPLPPPPQPP---APPQQQQP-PPPQPQPP 234


>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 564

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 10/118 (8%)

Query: 7   PAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPH 66
           PA+      R  R  G    + LP P  + P    AP  S+P AR  GG   G+ L++  
Sbjct: 359 PAQGSELWARAERHGGSSGARTLPTPSRARPGKP-APRGSAPPARLRGGG-GGSGLTQLV 416

Query: 67  GSGRDGEASTLS----RWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASPS 120
           GSGR G   T S       + R      P       PHF   P+S  A P   P SPS
Sbjct: 417 GSGR-GSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHF--RPLSSPA-PQSPPRSPS 470



 Score = 30.4 bits (67), Expect = 0.35
 Identities = 43/127 (33%), Positives = 50/127 (39%), Gaps = 15/127 (11%)

Query: 4   PPRPAEKPAALDRKRRGQGGDNG-KPLPDPG------HSGPSAARAPSRSSPRARRMGGV 56
           P +PA + +A   + RG GG +G   L   G      HS  + A A  R S RA R  GV
Sbjct: 389 PGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGS-RAPRPVGV 447

Query: 57  LAGATLSEPHGS--GRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLP 114
           L G     P  S   +    S   R   PR   G   C    QAP   A P  G A   P
Sbjct: 448 LRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCP---QAPRAAALP--GIAVLAP 502

Query: 115 RPASPSG 121
            PA   G
Sbjct: 503 SPAHDWG 509


>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 564

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 10/118 (8%)

Query: 7   PAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPH 66
           PA+      R  R  G    + LP P  + P    AP  S+P AR  GG   G+ L++  
Sbjct: 359 PAQGSELWARAERHGGSSGARTLPTPSRARPGKP-APRGSAPPARLRGGG-GGSGLTQLV 416

Query: 67  GSGRDGEASTLS----RWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASPS 120
           GSGR G   T S       + R      P       PHF   P+S  A P   P SPS
Sbjct: 417 GSGR-GSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHF--RPLSSPA-PQSPPRSPS 470



 Score = 30.4 bits (67), Expect = 0.35
 Identities = 43/127 (33%), Positives = 50/127 (39%), Gaps = 15/127 (11%)

Query: 4   PPRPAEKPAALDRKRRGQGGDNG-KPLPDPG------HSGPSAARAPSRSSPRARRMGGV 56
           P +PA + +A   + RG GG +G   L   G      HS  + A A  R S RA R  GV
Sbjct: 389 PGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGS-RAPRPVGV 447

Query: 57  LAGATLSEPHGS--GRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLP 114
           L G     P  S   +    S   R   PR   G   C    QAP   A P  G A   P
Sbjct: 448 LRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCP---QAPRAAALP--GIAVLAP 502

Query: 115 RPASPSG 121
            PA   G
Sbjct: 503 SPAHDWG 509


>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
          Length = 948

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 8/86 (9%)

Query: 33  GHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSGRDGEASTLSRWQSPREDEGGTPC 92
           G   PSA++ P+R +P +     + A A  + PH  G     S+ S+  S        P 
Sbjct: 829 GPRKPSASQRPTRQTPSS---AALTAAAVAAPPHCPGGSASPSS-SKASSSSSSSSSPPA 884

Query: 93  SSPHQAPHF----LAPPVSGTACPLP 114
           S  H+AP      LA   S   C LP
Sbjct: 885 SLDHEAPSLQEAALAAACSNRLCKLP 910


>gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4
           [Homo sapiens]
          Length = 809

 Score = 35.4 bits (80), Expect = 0.011
 Identities = 36/110 (32%), Positives = 44/110 (40%), Gaps = 24/110 (21%)

Query: 29  LPDPGHSGPSAARAPSRSSPRARRMGGVLA--GATLSEPHGSGRDGEASTLSRWQS---- 82
           LP+PG   P+ A     S   A  + G L   G  +    GS RD   +T    Q+    
Sbjct: 36  LPEPGSETPTVA-----SEALAELLHGALLRRGPEMGYLPGSDRDPTLATPPAGQTLAVP 90

Query: 83  --PREDEGGT----PCSSPH-------QAPHFLAPPVSGTACPLPRPASP 119
             PR  E GT       +P+        AP  L PP   TA P P PASP
Sbjct: 91  SLPRATEPGTGPLTTAVTPNGVRGAGPTAPELLTPPPGTTAPPPPSPASP 140


>gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2
           [Homo sapiens]
          Length = 910

 Score = 35.4 bits (80), Expect = 0.011
 Identities = 36/110 (32%), Positives = 44/110 (40%), Gaps = 24/110 (21%)

Query: 29  LPDPGHSGPSAARAPSRSSPRARRMGGVLA--GATLSEPHGSGRDGEASTLSRWQS---- 82
           LP+PG   P+ A     S   A  + G L   G  +    GS RD   +T    Q+    
Sbjct: 36  LPEPGSETPTVA-----SEALAELLHGALLRRGPEMGYLPGSDRDPTLATPPAGQTLAVP 90

Query: 83  --PREDEGGT----PCSSPH-------QAPHFLAPPVSGTACPLPRPASP 119
             PR  E GT       +P+        AP  L PP   TA P P PASP
Sbjct: 91  SLPRATEPGTGPLTTAVTPNGVRGAGPTAPELLTPPPGTTAPPPPSPASP 140


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 35.4 bits (80), Expect = 0.011
 Identities = 31/115 (26%), Positives = 37/115 (32%), Gaps = 9/115 (7%)

Query: 5   PRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSE 64
           P P     A+ R+ R  G + G P P      PSA   P    PR           T   
Sbjct: 167 PTPGTPSPAMARRSRAAGTEVGLPRP-----APSARPRPPTEGPRKSVSSASEHSTTEPS 221

Query: 65  PHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASP 119
           P    R      L R  S       TP SSP ++     P   GT      P+ P
Sbjct: 222 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARS----GPSARGTPRAPAHPSQP 272



 Score = 31.6 bits (70), Expect = 0.16
 Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 9/117 (7%)

Query: 10  KPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSG 69
           +P+   R+R   GG   +P      S  +   +P+RS P AR  G   A A  S+P   G
Sbjct: 219 EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR--GTPRAPAHPSQPKPKG 276

Query: 70  RDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSG---TACPLPRPASPSGSS 123
              +A    +   PR+D    P   P  +     P  S    +  P   PA+P  SS
Sbjct: 277 L--QALRPPQVTPPRKD--AAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSS 329


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 35.4 bits (80), Expect = 0.011
 Identities = 31/115 (26%), Positives = 37/115 (32%), Gaps = 9/115 (7%)

Query: 5   PRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSE 64
           P P     A+ R+ R  G + G P P      PSA   P    PR           T   
Sbjct: 167 PTPGTPSPAMARRSRAAGTEVGLPRP-----APSARPRPPTEGPRKSVSSASEHSTTEPS 221

Query: 65  PHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASP 119
           P    R      L R  S       TP SSP ++     P   GT      P+ P
Sbjct: 222 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARS----GPSARGTPRAPAHPSQP 272



 Score = 34.3 bits (77), Expect = 0.024
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 7/108 (6%)

Query: 10  KPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSG 69
           +P+   R+R   GG   +P      S  +   +P+RS P AR  G   A A  S+P   G
Sbjct: 219 EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR--GTPRAPAHPSQPKPKG 276

Query: 70  RDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGT-ACPLPRP 116
              +A    +   PR+D    P   P  +     P  SGT A P+P P
Sbjct: 277 L--QALRPPQVTPPRKD--AAPALGPLSSSPLATPSPSGTKARPVPPP 320


>gi|169211642 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 378

 Score = 35.4 bits (80), Expect = 0.011
 Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 17/99 (17%)

Query: 28  PLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSGRDGEASTLSRW-QSPRED 86
           P   PG  GPS   A ++ + RAR  G    GA L+     GR G A   +R  Q+    
Sbjct: 253 PAASPGAPGPSRPAARAQPAQRARGPG---VGARLAGVTRDGRGGPARDAARSPQAGPGS 309

Query: 87  EGGTPCS------------SPHQAPHFLAPPVSGTACPL 113
           EG  P S            SP++ P F+ P VS  + PL
Sbjct: 310 EGSRPSSRKRGEAAPAPPKSPNRQP-FVLPDVSKASSPL 347


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 35.4 bits (80), Expect = 0.011
 Identities = 31/115 (26%), Positives = 37/115 (32%), Gaps = 9/115 (7%)

Query: 5   PRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSE 64
           P P     A+ R+ R  G + G P P      PSA   P    PR           T   
Sbjct: 158 PTPGTPSPAMARRSRAAGTEVGLPRP-----APSARPRPPTEGPRKSVSSASEHSTTEPS 212

Query: 65  PHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRPASP 119
           P    R      L R  S       TP SSP ++     P   GT      P+ P
Sbjct: 213 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARS----GPSARGTPRAPAHPSQP 263



 Score = 32.3 bits (72), Expect = 0.093
 Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 12/114 (10%)

Query: 10  KPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSG 69
           +P+   R+R   GG   +P      S  +   +P+RS P AR  G   A A  S+P   G
Sbjct: 210 EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR--GTPRAPAHPSQPKPKG 267

Query: 70  RDGEASTLSRWQSPREDEG---GTPCSSPHQAPHFLAPPVSGTACP----LPRP 116
              +A    +   PR+D     G   SSP   P   APP S +A P    LP P
Sbjct: 268 L--QALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPP-SPSAPPSLQTLPSP 318


>gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo
           sapiens]
          Length = 378

 Score = 35.4 bits (80), Expect = 0.011
 Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 17/99 (17%)

Query: 28  PLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSGRDGEASTLSRW-QSPRED 86
           P   PG  GPS   A ++ + RAR  G    GA L+     GR G A   +R  Q+    
Sbjct: 253 PAASPGAPGPSRPAARAQPAQRARGPG---VGARLAGVTRDGRGGPARDAARSPQAGPGS 309

Query: 87  EGGTPCS------------SPHQAPHFLAPPVSGTACPL 113
           EG  P S            SP++ P F+ P VS  + PL
Sbjct: 310 EGSRPSSRKRGEAAPAPPKSPNRQP-FVLPDVSKASSPL 347


>gi|24308075 RAB11 family interacting protein 5 (class I) [Homo
           sapiens]
          Length = 653

 Score = 35.0 bits (79), Expect = 0.014
 Identities = 34/102 (33%), Positives = 43/102 (42%), Gaps = 11/102 (10%)

Query: 8   AEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHG 67
           AEK  A   +R+ + G     L    H G S +    RSS   +  GG + GA+   PH 
Sbjct: 448 AEKEGARKEERKPRMG-----LFHHHHQGLSRSELGRRSSLGEK--GGPILGAS---PHH 497

Query: 68  SGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGT 109
           S   GE    S W   RE +  T   SPH      A PV G+
Sbjct: 498 SS-SGEEKAKSSWFGLREAKDPTQKPSPHPVKPLSAAPVEGS 538


>gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 35.0 bits (79), Expect = 0.014
 Identities = 30/108 (27%), Positives = 38/108 (35%), Gaps = 11/108 (10%)

Query: 2   LGPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGAT 61
           L  P P+  P+   R+ R   G    P P P    PS + +P+R        GG      
Sbjct: 112 LRKPSPSPSPSLRRRRARNSPGIRPSPSPSP---SPSPSPSPAR--------GGRWTTCA 160

Query: 62  LSEPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGT 109
            S P   G DG    +S    P         SSPH       PP  G+
Sbjct: 161 SSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGS 208



 Score = 26.9 bits (58), Expect = 3.9
 Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 5/111 (4%)

Query: 14  LDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSGRDGE 73
           L+   R   G   +P P+     PS      R   R+ R GGV A A      GSGR   
Sbjct: 42  LEALGRDWRGTVAEPRPEAQGRVPSFRSNARRV--RSVRGGGVTAPAPPDAEVGSGRPAG 99

Query: 74  ASTLSRWQSPREDEGGTPCSSP--HQAPHFLAPPVSGTACPLPRPASPSGS 122
            +  +   +PR     +P  SP   +     +P +  +  P P P SPS S
Sbjct: 100 LAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSP-SPSPS 149


>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 35.0 bits (79), Expect = 0.014
 Identities = 36/115 (31%), Positives = 39/115 (33%), Gaps = 23/115 (20%)

Query: 21  QGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSGRDGEASTLSR- 79
           +GG  G P P    SGP+   A  R  P  RR  G   GA      G G      T  R 
Sbjct: 142 KGGGPGLP-PRGKASGPARDSAQQRRRP-TRRPRGTRGGARRPGVRGQGAAAVGPTGPRP 199

Query: 80  -----------------WQSPREDEGGTPC---SSPHQAPHFLAPPVSGTACPLP 114
                             +SP    G TP    S P  AP  L PP S T  P P
Sbjct: 200 TGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEALRPPASTTRAPAP 254


>gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 35.0 bits (79), Expect = 0.014
 Identities = 30/108 (27%), Positives = 38/108 (35%), Gaps = 11/108 (10%)

Query: 2   LGPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGAT 61
           L  P P+  P+   R+ R   G    P P P    PS + +P+R        GG      
Sbjct: 112 LRKPSPSPSPSLRRRRARNSPGIRPSPSPSP---SPSPSPSPAR--------GGRWTTCA 160

Query: 62  LSEPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGT 109
            S P   G DG    +S    P         SSPH       PP  G+
Sbjct: 161 SSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGS 208



 Score = 26.9 bits (58), Expect = 3.9
 Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 5/111 (4%)

Query: 14  LDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSGRDGE 73
           L+   R   G   +P P+     PS      R   R+ R GGV A A      GSGR   
Sbjct: 42  LEALGRDWRGTVAEPRPEAQGRVPSFRSNARRV--RSVRGGGVTAPAPPDAEVGSGRPAG 99

Query: 74  ASTLSRWQSPREDEGGTPCSSP--HQAPHFLAPPVSGTACPLPRPASPSGS 122
            +  +   +PR     +P  SP   +     +P +  +  P P P SPS S
Sbjct: 100 LAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSP-SPSPS 149


>gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens]
          Length = 196

 Score = 35.0 bits (79), Expect = 0.014
 Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 8/117 (6%)

Query: 5   PRPAEKPA--ALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATL 62
           P  A +P   ++D    G+G  +      PG SGPS + A   +  R    G +  G   
Sbjct: 70  PAAARRPQVQSIDTTPSGEGAPSFSRAQRPGRSGPSPSLASDPAPGRGAAWGSLRPGKR- 128

Query: 63  SEPHGSGRDGEASTLSRWQSPRE--DEGGTPCSSPHQAPHFLAPPVSGTACPLPRPA 117
            +   S   G AS  +R    RE    GG+ C        +L PP +G++  L  P+
Sbjct: 129 QQALESEAGGRASREARAAEVRERIPGGGSWCPGRRD---WLTPPCAGSSSQLTEPS 182


>gi|239750099 PREDICTED: hypothetical protein XP_002347292 [Homo
           sapiens]
          Length = 106

 Score = 35.0 bits (79), Expect = 0.014
 Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 7/67 (10%)

Query: 4   PPR-PAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATL 62
           PPR PA +PAA     RG+ G  G   P P H     A  P R   R     G + G + 
Sbjct: 44  PPRSPALRPAA---GLRGRSGAQGPQRPRPAHYNSQEASRPDR---RGATREGCVCGESR 97

Query: 63  SEPHGSG 69
              HGSG
Sbjct: 98  RPAHGSG 104


>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 35.0 bits (79), Expect = 0.014
 Identities = 36/115 (31%), Positives = 39/115 (33%), Gaps = 23/115 (20%)

Query: 21  QGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSGRDGEASTLSR- 79
           +GG  G P P    SGP+   A  R  P  RR  G   GA      G G      T  R 
Sbjct: 142 KGGGPGLP-PRGKASGPARDSAQQRRRP-TRRPRGTRGGARRPGVRGQGAAAVGPTGPRP 199

Query: 80  -----------------WQSPREDEGGTPC---SSPHQAPHFLAPPVSGTACPLP 114
                             +SP    G TP    S P  AP  L PP S T  P P
Sbjct: 200 TGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEALRPPASTTRAPAP 254


>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 35.0 bits (79), Expect = 0.014
 Identities = 30/108 (27%), Positives = 38/108 (35%), Gaps = 11/108 (10%)

Query: 2   LGPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGAT 61
           L  P P+  P+   R+ R   G    P P P    PS + +P+R        GG      
Sbjct: 112 LRKPSPSPSPSLRRRRARNSPGIRPSPSPSP---SPSPSPSPAR--------GGRWTTCA 160

Query: 62  LSEPHGSGRDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGT 109
            S P   G DG    +S    P         SSPH       PP  G+
Sbjct: 161 SSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGS 208



 Score = 26.9 bits (58), Expect = 3.9
 Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 5/111 (4%)

Query: 14  LDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSGRDGE 73
           L+   R   G   +P P+     PS      R   R+ R GGV A A      GSGR   
Sbjct: 42  LEALGRDWRGTVAEPRPEAQGRVPSFRSNARRV--RSVRGGGVTAPAPPDAEVGSGRPAG 99

Query: 74  ASTLSRWQSPREDEGGTPCSSP--HQAPHFLAPPVSGTACPLPRPASPSGS 122
            +  +   +PR     +P  SP   +     +P +  +  P P P SPS S
Sbjct: 100 LAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSP-SPSPS 149


>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 35.0 bits (79), Expect = 0.014
 Identities = 36/115 (31%), Positives = 39/115 (33%), Gaps = 23/115 (20%)

Query: 21  QGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSGRDGEASTLSR- 79
           +GG  G P P    SGP+   A  R  P  RR  G   GA      G G      T  R 
Sbjct: 142 KGGGPGLP-PRGKASGPARDSAQQRRRP-TRRPRGTRGGARRPGVRGQGAAAVGPTGPRP 199

Query: 80  -----------------WQSPREDEGGTPC---SSPHQAPHFLAPPVSGTACPLP 114
                             +SP    G TP    S P  AP  L PP S T  P P
Sbjct: 200 TGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEALRPPASTTRAPAP 254


>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
          Length = 711

 Score = 35.0 bits (79), Expect = 0.014
 Identities = 25/98 (25%), Positives = 34/98 (34%), Gaps = 8/98 (8%)

Query: 30  PDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHGSGRDGEASTLSRWQSPR---ED 86
           P PG  GP+    P    P  +   G    A    PH     G  +T  +WQ P      
Sbjct: 504 PGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPS 563

Query: 87  EGGTPCSSPHQA-----PHFLAPPVSGTACPLPRPASP 119
           +     + P+ A      H+   P      P P PA+P
Sbjct: 564 KAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAP 601



 Score = 30.4 bits (67), Expect = 0.35
 Identities = 27/91 (29%), Positives = 31/91 (34%), Gaps = 16/91 (17%)

Query: 3  GPPRPAEKPAALDRKRRGQGGDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLAGATL 62
          GPP PA           G GG  G P P P  +G      P    P     GG  AG   
Sbjct: 12 GPPPPAGGGG-------GAGGAGGGPPPGPPGAGDRGGGGPGGGGP-----GGGSAGGPS 59

Query: 63 SEPHGSG----RDGEASTLSRWQSPREDEGG 89
            P G G    +D  A  + R +      GG
Sbjct: 60 QPPGGGGPGIRKDAFADAVQRARQIAAKIGG 90


>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 34.7 bits (78), Expect = 0.019
 Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 4   PPRPAEKPAALDRKRRGQGGDNGKPLPDPGHS-GPSAARAPSRSSP------RARRMGGV 56
           PPRPA +  A +  R   GG  G   P  G + G S  R   R+SP       A   G  
Sbjct: 149 PPRPAHQSPAEEGPRGAAGG--GPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGPA 206

Query: 57  LAGATLSEPHGS 68
             GAT SEPH +
Sbjct: 207 RDGATRSEPHAT 218



 Score = 29.3 bits (64), Expect = 0.79
 Identities = 33/125 (26%), Positives = 40/125 (32%), Gaps = 33/125 (26%)

Query: 23  GDNGKPLPDPGHSGPSAARAP------------------SRSSPRARR----MGGVLAGA 60
           G   + LP P   GPS  RAP                  +  SP  RR    +G   A  
Sbjct: 31  GSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATR 90

Query: 61  TLSEPHGSG------RDGEASTLSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLP 114
           + + PH         R GE S       P  D    P  + +      A P      PL 
Sbjct: 91  SAASPHSKMWLGSHLRGGEMS-----GDPHTDLPAHPAQTTNPELELPADPAQPDPAPLS 145

Query: 115 RPASP 119
           RPA P
Sbjct: 146 RPAPP 150



 Score = 26.2 bits (56), Expect = 6.7
 Identities = 25/100 (25%), Positives = 32/100 (32%), Gaps = 15/100 (15%)

Query: 30  PDPGHSGPSAARAPSRSSPRARRMGGVLAGATLSEPHG--SGRDG-----------EAST 76
           PDP      A   P+  SP      G   G   + P G   G+ G            A  
Sbjct: 139 PDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPA 198

Query: 77  LSRWQSPREDEGGTPCSSPHQAPHFLAPPVSGTACPLPRP 116
           ++  + P  D  G   S PH        P S  +C L  P
Sbjct: 199 MASVRGPARD--GATRSEPHATEIRTLEPQSARSCCLAAP 236


>gi|239754611 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 178

 Score = 34.7 bits (78), Expect = 0.019
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 23  GDNGKPLPDPGHSGPSAARAPSRSSPRARRMGGVLA---GATLSEPHGSGRDGEASTLSR 79
           G +G+P    GH  P+ AR P+  +P A  + G  A   GA    P G  R G  +    
Sbjct: 80  GLHGRPAACRGHPRPTPARPPT-GAPEAPALSGRAARLHGAQRGAPAGQARHGAGNRHPP 138

Query: 80  WQSPREDEGG 89
            Q   ED GG
Sbjct: 139 RQGQEEDGGG 148


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.131    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,993,193
Number of Sequences: 37866
Number of extensions: 540023
Number of successful extensions: 3371
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 555
Number of HSP's that attempted gapping in prelim test: 2822
Number of HSP's gapped (non-prelim): 1062
length of query: 123
length of database: 18,247,518
effective HSP length: 89
effective length of query: 34
effective length of database: 14,877,444
effective search space: 505833096
effective search space used: 505833096
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.