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Search of human proteins with 239742436
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742436 PREDICTED: hypothetical protein [Homo sapiens]
(196 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748472 PREDICTED: hypothetical protein [Homo sapiens] 400 e-112
gi|239742436 PREDICTED: hypothetical protein [Homo sapiens] 400 e-112
gi|239753930 PREDICTED: hypothetical protein [Homo sapiens] 399 e-111
gi|116686120 periaxin isoform 2 [Homo sapiens] 59 3e-09
gi|160707881 formin 2 [Homo sapiens] 55 3e-08
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 50 9e-07
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 50 9e-07
gi|117938310 sine oculis binding protein homolog [Homo sapiens] 42 4e-04
gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 41 7e-04
gi|110349719 titin isoform N2-A [Homo sapiens] 40 0.001
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 40 0.002
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 40 0.002
gi|21359951 RNA binding motif protein 42 [Homo sapiens] 39 0.002
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|210032580 SET domain containing 1B [Homo sapiens] 39 0.004
gi|146134388 YLP motif containing 1 [Homo sapiens] 39 0.004
gi|29826294 golgi reassembly stacking protein 2 [Homo sapiens] 37 0.011
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 37 0.014
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 37 0.014
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 37 0.014
gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens] 37 0.014
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 36 0.024
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 36 0.024
gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens] 36 0.024
gi|124378039 SEC16 homolog A [Homo sapiens] 35 0.041
gi|119120861 formin-like 3 isoform 2 [Homo sapiens] 35 0.053
gi|119120874 formin-like 3 isoform 1 [Homo sapiens] 35 0.053
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 34 0.070
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 34 0.070
gi|71040090 regulatory factor X, 5 [Homo sapiens] 34 0.091
>gi|239748472 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 400 bits (1028), Expect = e-112
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MPDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFS 60
MPDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFS
Sbjct: 1 MPDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFS 60
Query: 61 VWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCP 120
VWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCP
Sbjct: 61 VWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCP 120
Query: 121 ALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELP 180
ALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELP
Sbjct: 121 ALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELP 180
Query: 181 GVPASSTARVPGAFRL 196
GVPASSTARVPGAFRL
Sbjct: 181 GVPASSTARVPGAFRL 196
>gi|239742436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 400 bits (1028), Expect = e-112
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MPDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFS 60
MPDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFS
Sbjct: 1 MPDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFS 60
Query: 61 VWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCP 120
VWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCP
Sbjct: 61 VWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCP 120
Query: 121 ALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELP 180
ALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELP
Sbjct: 121 ALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELP 180
Query: 181 GVPASSTARVPGAFRL 196
GVPASSTARVPGAFRL
Sbjct: 181 GVPASSTARVPGAFRL 196
>gi|239753930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 399 bits (1024), Expect = e-111
Identities = 195/196 (99%), Positives = 195/196 (99%)
Query: 1 MPDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFS 60
MPDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFS
Sbjct: 1 MPDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFS 60
Query: 61 VWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCP 120
VWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCP
Sbjct: 61 VWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCP 120
Query: 121 ALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELP 180
ALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLP LPGPELPGFQVAVPPVPELP
Sbjct: 121 ALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPALPGPELPGFQVAVPPVPELP 180
Query: 181 GVPASSTARVPGAFRL 196
GVPASSTARVPGAFRL
Sbjct: 181 GVPASSTARVPGAFRL 196
>gi|116686120 periaxin isoform 2 [Homo sapiens]
Length = 1461
Score = 58.9 bits (141), Expect = 3e-09
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 36 VVLPEVTFSLPVLSSLSPLEVTSFSVWYSLLVPGLTFPDTSS-NVPQSGLLGLAFPEPGL 94
V LPEV LP +S + EV+ +V + +P + P VP+ L + PE L
Sbjct: 541 VRLPEV--QLPKVSEMKLPEVSEVAV-PEVRLPEVQLPKVPEMKVPEMKLPKV--PEMKL 595
Query: 95 SGLKLPDSEC-HCP--VLPDTELSEVQCPA-----LPRSELPGFQVPVLPGLGLPGFWFP 146
+KLP+ + P +PD L EVQ P LP +LP ++P +P + +P P
Sbjct: 596 PEMKLPEVQLPKVPEMAVPDVHLPEVQLPKVPEMKLPEMKLPEVKLPKVPEMAVPDVHLP 655
Query: 147 VLPVPELPEFQLPVLPGPELPGFQVAVPPVPELPGVPASSTARVP 191
+ +P++PE +LP +P +P +V +P V +LP V +VP
Sbjct: 656 EVQLPKVPEMKLPKMPEMAVP--EVRLPEV-QLPKVSEMKLPKVP 697
Score = 57.4 bits (137), Expect = 8e-09
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 49/194 (25%)
Query: 36 VVLPEVTFSLPVLSSLSPLEVTSFSVWYSLLVPGLTFPDTS---------SNVPQSGLLG 86
V LPEV LP +S + +V +V P + P+ VP+ +
Sbjct: 489 VRLPEV--ELPKVSEMKLPKVPEMAV------PEVRLPEVQLLKVSEMKLPKVPEMAVPE 540
Query: 87 LAFPE---PGLSGLKLPD-SECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPG 142
+ PE P +S +KLP+ SE +P+ L EVQ P +P ++P ++P +P + LP
Sbjct: 541 VRLPEVQLPKVSEMKLPEVSEV---AVPEVRLPEVQLPKVPEMKVPEMKLPKVPEMKLPE 597
Query: 143 FWFPVLPVPE----------LPEFQLPVLPGPELPGF---QVAVPPVPE----------- 178
P + +P+ LPE QLP +P +LP +V +P VPE
Sbjct: 598 MKLPEVQLPKVPEMAVPDVHLPEVQLPKVPEMKLPEMKLPEVKLPKVPEMAVPDVHLPEV 657
Query: 179 -LPGVPASSTARVP 191
LP VP ++P
Sbjct: 658 QLPKVPEMKLPKMP 671
Score = 55.8 bits (133), Expect = 2e-08
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Query: 10 VSLTNSPNIGPITVLVTVLEHERRVVVVLPEVT-FSLPVLSSLS-------PLEVTSFSV 61
V L +P + V L R V LP+V+ LP + ++ +E+ S
Sbjct: 442 VKLPKAPEVKLPKVPEAALPEVRLPEVELPKVSEMKLPKVPEMAVPEVRLPEVELPKVSE 501
Query: 62 WYSLLVPGLTFPDTSSNVPQSGLLGLA------FPEPGLSGLKLPDSECHCPVLPDTELS 115
VP + P+ +P+ LL ++ PE + ++LP E P + + +L
Sbjct: 502 MKLPKVPEMAVPEV--RLPEVQLLKVSEMKLPKVPEMAVPEVRLP--EVQLPKVSEMKLP 557
Query: 116 EVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVP- 174
EV A+P LP Q+P +P + +P P +P +LPE +LP + P++P ++AVP
Sbjct: 558 EVSEVAVPEVRLPEVQLPKVPEMKVPEMKLPKVPEMKLPEMKLPEVQLPKVP--EMAVPD 615
Query: 175 ---PVPELPGVP 183
P +LP VP
Sbjct: 616 VHLPEVQLPKVP 627
Score = 52.4 bits (124), Expect = 2e-07
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 65 LLVPGLTFPDTS-SNVPQSGLLGL---AFPEPGLSGLKLPD-SECHCP-----VLPDTEL 114
+ VP + P+ VP+ L + A PE L ++LP SE P +PD L
Sbjct: 647 MAVPDVHLPEVQLPKVPEMKLPKMPEMAVPEVRLPEVQLPKVSEMKLPKVPEMAVPDVHL 706
Query: 115 SEVQCPAL-----PRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGF 169
EVQ P + P +LP ++P +P + +P P + +P++ E +LP + P++P
Sbjct: 707 PEVQLPKVCEMKVPDMKLPEIKLPKVPEMAVPDVHLPEVQLPKVSEIRLPEMQVPKVPDV 766
Query: 170 QVAVPPVPELPGVP 183
+ P +LP P
Sbjct: 767 HLPKAPEVKLPRAP 780
Score = 42.7 bits (99), Expect = 2e-04
Identities = 47/162 (29%), Positives = 66/162 (40%), Gaps = 25/162 (15%)
Query: 31 ERRVVVVLPEVTFSLPVL-------SSLSPLEVTSFSVWYSLLVPGLTFPDTSSNVPQSG 83
E +V V PE P L S L P V L +P + P
Sbjct: 374 EAKVAKVSPEARVKGPRLRMPTFGLSLLEPRPAAPEVVESKLKLPTIKMPSLG------- 426
Query: 84 LLGLAFPEPGLSGLKLPDS-ECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPG 142
+G++ PE +K+P E P P+ +L +V ALP LP ++P + + LP
Sbjct: 427 -IGVSGPE-----VKVPKGPEVKLPKAPEVKLPKVPEAALPEVRLPEVELPKVSEMKLPK 480
Query: 143 FWFPVLPVPE--LPEFQLPVLPGPELPGFQVAVPPVPELPGV 182
P + VPE LPE +LP + +LP P LP V
Sbjct: 481 V--PEMAVPEVRLPEVELPKVSEMKLPKVPEMAVPEVRLPEV 520
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 55.5 bits (132), Expect = 3e-08
Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 68 PGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHC----PVLPDTELSEVQCPALP 123
P L ++SS++P G++ P P L G+ +P P L TE+ P LP
Sbjct: 859 PPLPCTESSSSMPGLGMVPP--PPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLP 916
Query: 124 RSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELPGVP 183
+ +P P LPG G +LP+P LP +P P P LPG A+PP P LPG
Sbjct: 917 GAGIP--PPPPLPGAG-------ILPLPPLPGAGIP--PPPPLPG--AAIPPPPPLPGAG 963
Query: 184 ASSTARVPGA 193
+PGA
Sbjct: 964 IPLPPPLPGA 973
Score = 50.4 bits (119), Expect = 9e-07
Identities = 45/127 (35%), Positives = 57/127 (44%), Gaps = 24/127 (18%)
Query: 67 VPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSE 126
+PG+ P +P +G+ P P L G +P P LP + P LPR
Sbjct: 1102 LPGVGIPPPPP-LPGAGIP----PPPPLPGAGIPPP----PPLPGAGIPPP--PPLPRVG 1150
Query: 127 LPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELPGVPASS 186
+P P LPG G+P P P LP +P P P LPG V +PP P LPGV
Sbjct: 1151 IP--PPPPLPGAGIP-------PPPPLPGAGIP--PPPPLPG--VGIPPPPPLPGVGIPP 1197
Query: 187 TARVPGA 193
+PGA
Sbjct: 1198 PPPLPGA 1204
Score = 49.7 bits (117), Expect = 2e-06
Identities = 50/147 (34%), Positives = 60/147 (40%), Gaps = 32/147 (21%)
Query: 67 VPGLTFPDTSSNV-----PQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCPA 121
+PG+T P S P G L P P L G +P P LP + + P
Sbjct: 883 LPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPP----PPLPGAGI--LPLPP 936
Query: 122 LPRS------ELPGFQVPV---LPGLG------LPGFWFPVLPVPELPEFQLPVLPGPEL 166
LP + LPG +P LPG G LPG P P P LP +P P P L
Sbjct: 937 LPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIP--PPPPLPGAGIP--PPPPL 992
Query: 167 PGFQVAVPPVPELPGVPASSTARVPGA 193
PG +PP P LPG +PGA
Sbjct: 993 PG--AGIPPPPPLPGAGIPPPPPLPGA 1017
Score = 47.0 bits (110), Expect = 1e-05
Identities = 38/104 (36%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 90 PEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLP 149
P P L G +P P LP + P LP + +P P LPG G+P P
Sbjct: 1032 PPPPLPGAGIPPP----PPLPGAGIPPP--PPLPGAGIP--PPPPLPGAGIP-------P 1076
Query: 150 VPELPEFQLPVLPGPELPGFQVAVPPVPELPGVPASSTARVPGA 193
P LP +P P P LPG +PP P LPGV +PGA
Sbjct: 1077 PPPLPGAGIP--PPPPLPG--AGIPPPPPLPGVGIPPPPPLPGA 1116
Score = 47.0 bits (110), Expect = 1e-05
Identities = 38/104 (36%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 90 PEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLP 149
P P L G +P P LP + P LP + +P P LPG G+P P
Sbjct: 1043 PPPPLPGAGIPPP----PPLPGAGIPPP--PPLPGAGIP--PPPPLPGAGIP-------P 1087
Query: 150 VPELPEFQLPVLPGPELPGFQVAVPPVPELPGVPASSTARVPGA 193
P LP +P P P LPG V +PP P LPG +PGA
Sbjct: 1088 PPPLPGAGIP--PPPPLPG--VGIPPPPPLPGAGIPPPPPLPGA 1127
Score = 46.2 bits (108), Expect = 2e-05
Identities = 44/133 (33%), Positives = 53/133 (39%), Gaps = 25/133 (18%)
Query: 67 VPGLTFPDTSSNVPQSGLLGLAFPEPGL---SGLKLPDSECHCPVLPDTELSEVQCPALP 123
+PG P P L G A P P +G+ LP + P L P P
Sbjct: 937 LPGAGIP------PPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIP--P 988
Query: 124 RSELPGFQVPV---LPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELP 180
LPG +P LPG G+P P P LP +P P P LPG +PP P LP
Sbjct: 989 PPPLPGAGIPPPPPLPGAGIP-------PPPPLPGAGIP--PPPPLPG--AGIPPPPPLP 1037
Query: 181 GVPASSTARVPGA 193
G +PGA
Sbjct: 1038 GAGIPPPPPLPGA 1050
Score = 43.1 bits (100), Expect = 2e-04
Identities = 33/94 (35%), Positives = 38/94 (40%), Gaps = 21/94 (22%)
Query: 90 PEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPV---LPGLGLPGFWFP 146
P P L G +P P L V P P LPG +P LPG G+P
Sbjct: 1164 PPPPLPGAGIP---------PPPPLPGVGIP--PPPPLPGVGIPPPPPLPGAGIP----- 1207
Query: 147 VLPVPELPEFQLPVLPGPELPGFQVAVPPVPELP 180
P P LP +P P P LP +PP P LP
Sbjct: 1208 --PPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLP 1239
Score = 42.4 bits (98), Expect = 3e-04
Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 20/99 (20%)
Query: 90 PEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLG------LPGF 143
P P L G +P P LP + P LP + +P P LPG G LPG
Sbjct: 1131 PPPPLPGAGIPPP----PPLPRVGIPPP--PPLPGAGIP--PPPPLPGAGIPPPPPLPGV 1182
Query: 144 WFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELPGV 182
P P P LP +P P P LPG +PP P LPG+
Sbjct: 1183 GIP--PPPPLPGVGIP--PPPPLPG--AGIPPPPPLPGM 1215
Score = 33.9 bits (76), Expect = 0.091
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 25/98 (25%)
Query: 90 PEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVL-------PGLGLPG 142
P P L G+ +P P LP + P LPG +P PG G+P
Sbjct: 1186 PPPPLPGVGIPPP----PPLPGAGIP-------PPPPLPGMGIPPAPAPPLPPPGTGIPP 1234
Query: 143 FWFPVLPV---PELPEFQLPVLPGPELPGFQVAVPPVP 177
P+LPV P LP+ LP P++ GF PP+P
Sbjct: 1235 --PPLLPVSGPPLLPQVGSSTLPTPQVCGF--LPPPLP 1268
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 50.4 bits (119), Expect = 9e-07
Identities = 52/164 (31%), Positives = 71/164 (43%), Gaps = 35/164 (21%)
Query: 46 PVLSSLSPLEVTSFSVWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPG-LSGLKLPDSEC 104
PV L P E ++ S P +P+ S++ FPE + L+LP+
Sbjct: 295 PVAKVLEPSE----TLVVSSETPTEVYPEPSTSTTMD------FPESSAIEALRLPEQPV 344
Query: 105 HCPV-LPDTELSEVQ-CPALPRS--------------ELPGFQVPVLPGLGLPGFWFPVL 148
P + D+ ++ Q P LP++ ELPG +P L P PV
Sbjct: 345 DVPSEIADSSMTRPQELPELPKTTALELQESSVASAMELPGPPATSMPELQGP----PVT 400
Query: 149 PVPELPEFQLPVLPGPELPGFQVAVPPVPELPGVPASSTARVPG 192
PV ELP P PELPG PVPELPG PA++ +PG
Sbjct: 401 PVLELPGPS--ATPVPELPG--PLSTPVPELPGPPATAVPELPG 440
Score = 46.2 bits (108), Expect = 2e-05
Identities = 59/171 (34%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 47 VLSSLSPLEV-------TSFSVWYSLLVPGLTFPDTSSNVPQ-----SGLLGLAFPE-PG 93
V+SS +P EV T+ S + L P+ +VP S PE P
Sbjct: 307 VVSSETPTEVYPEPSTSTTMDFPESSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366
Query: 94 LSGLKLPDSEC----HCPVLPDTELSEVQCPAL-PRSELPG---FQVPVLPG-LGLPGFW 144
+ L+L +S P P T + E+Q P + P ELPG VP LPG L P
Sbjct: 367 TTALELQESSVASAMELPGPPATSMPELQGPPVTPVLELPGPSATPVPELPGPLSTP--- 423
Query: 145 FPVLPVPELPEFQLPVLPGPELPGFQVAVPPVP----ELPGVPASSTARVP 191
P LP P P +P LPGP +V PVP ELPG+PA S P
Sbjct: 424 VPELPGP--PATAVPELPGP-------SVTPVPQLSQELPGLPAPSMGLEP 465
Score = 29.6 bits (65), Expect = 1.7
Identities = 41/136 (30%), Positives = 52/136 (38%), Gaps = 21/136 (15%)
Query: 67 VPGLTFPDTSSNVPQSGLLGLAFPEPG-----LSGLKLPDSECHCPVLPDT----ELSEV 117
+PGL P PQ PEP L GL L + P P EL+E
Sbjct: 453 LPGLPAPSMGLEPPQE------VPEPPVMAQELPGLPLVTAAVELPEQPAVTVAMELTEQ 506
Query: 118 QCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPE-FQLPVLP----GPELPGFQVA 172
+ G PG +L PE +LP P ELPG Q +
Sbjct: 507 PVTTTELEQPVGMTTVEHPGHPEVTTATGLLGQPEATMVLELPGQPVATTALELPG-QPS 565
Query: 173 VPPVPELPGVPASSTA 188
V VPELPG+P+++ A
Sbjct: 566 VTGVPELPGLPSATRA 581
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 50.4 bits (119), Expect = 9e-07
Identities = 52/164 (31%), Positives = 71/164 (43%), Gaps = 35/164 (21%)
Query: 46 PVLSSLSPLEVTSFSVWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPG-LSGLKLPDSEC 104
PV L P E ++ S P +P+ S++ FPE + L+LP+
Sbjct: 295 PVAKVLEPSE----TLVVSSETPTEVYPEPSTSTTMD------FPESSAIEALRLPEQPV 344
Query: 105 HCPV-LPDTELSEVQ-CPALPRS--------------ELPGFQVPVLPGLGLPGFWFPVL 148
P + D+ ++ Q P LP++ ELPG +P L P PV
Sbjct: 345 DVPSEIADSSMTRPQELPELPKTTALELQESSVASAMELPGPPATSMPELQGP----PVT 400
Query: 149 PVPELPEFQLPVLPGPELPGFQVAVPPVPELPGVPASSTARVPG 192
PV ELP P PELPG PVPELPG PA++ +PG
Sbjct: 401 PVLELPGPS--ATPVPELPG--PLSTPVPELPGPPATAVPELPG 440
Score = 46.2 bits (108), Expect = 2e-05
Identities = 59/171 (34%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 47 VLSSLSPLEV-------TSFSVWYSLLVPGLTFPDTSSNVPQ-----SGLLGLAFPE-PG 93
V+SS +P EV T+ S + L P+ +VP S PE P
Sbjct: 307 VVSSETPTEVYPEPSTSTTMDFPESSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366
Query: 94 LSGLKLPDSEC----HCPVLPDTELSEVQCPAL-PRSELPG---FQVPVLPG-LGLPGFW 144
+ L+L +S P P T + E+Q P + P ELPG VP LPG L P
Sbjct: 367 TTALELQESSVASAMELPGPPATSMPELQGPPVTPVLELPGPSATPVPELPGPLSTP--- 423
Query: 145 FPVLPVPELPEFQLPVLPGPELPGFQVAVPPVP----ELPGVPASSTARVP 191
P LP P P +P LPGP +V PVP ELPG+PA S P
Sbjct: 424 VPELPGP--PATAVPELPGP-------SVTPVPQLSQELPGLPAPSMGLEP 465
Score = 29.6 bits (65), Expect = 1.7
Identities = 41/136 (30%), Positives = 52/136 (38%), Gaps = 21/136 (15%)
Query: 67 VPGLTFPDTSSNVPQSGLLGLAFPEPG-----LSGLKLPDSECHCPVLPDT----ELSEV 117
+PGL P PQ PEP L GL L + P P EL+E
Sbjct: 453 LPGLPAPSMGLEPPQE------VPEPPVMAQELPGLPLVTAAVELPEQPAVTVAMELTEQ 506
Query: 118 QCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPE-FQLPVLP----GPELPGFQVA 172
+ G PG +L PE +LP P ELPG Q +
Sbjct: 507 PVTTTELEQPVGMTTVEHPGHPEVTTATGLLGQPEATMVLELPGQPVATTALELPG-QPS 565
Query: 173 VPPVPELPGVPASSTA 188
V VPELPG+P+++ A
Sbjct: 566 VTGVPELPGLPSATRA 581
>gi|117938310 sine oculis binding protein homolog [Homo sapiens]
Length = 873
Score = 41.6 bits (96), Expect = 4e-04
Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 32/211 (15%)
Query: 9 SVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLP-VLSSLSPLEVTSF---SVWYS 64
S+ ++ +PNI P++V + + L S P V+++ P+ + F +
Sbjct: 352 SIPISETPNIPPVSV-----QPPASIGPPLGVPPRSPPMVMTNRGPVPLPIFMEQQIMQQ 406
Query: 65 LLVPGLTFPDTSSNVPQSGLL-----GLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQC 119
+ P + P ++ P S L G+ P G L S H P+L +
Sbjct: 407 IRPPFIRGPPHHASNPNSPLSNPMLPGIGPPPGGPRNLGPTSSPMHRPML-SPHIHPPST 465
Query: 120 PALPRSELPGFQVPVLPGLGLPGFWFP--------VLPVPELPEFQLPVL-----PGPEL 166
P +P + PG P PG LP FP +PVP++ F LP L P L
Sbjct: 466 PTMPGNP-PGLLPPPPPGAPLPSLPFPPVSMMPNGPMPVPQMMNFGLPSLAPLVPPPTLL 524
Query: 167 PGFQVAVP---PVPELPGVPASSTARVPGAF 194
+ V VP P+P +P S ++ P F
Sbjct: 525 VPYPVIVPLPVPIPIPIPIPHVSDSKPPNGF 555
>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
Length = 1271
Score = 40.8 bits (94), Expect = 7e-04
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 82 SGLLGLAFPE----PGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSE-LPGFQVPV-- 134
SG+LG+ P GL G+ P+ + ++ L VQ P +P + L G Q P
Sbjct: 852 SGILGIQPPSVSNSSGLLGVLPPN------IPNNSGLVGVQPPNVPNTPGLLGTQPPAGP 905
Query: 135 --LPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELP 180
LP L +P P +P+ ++ +P PGP P Q +PP +P
Sbjct: 906 QNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIP 953
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 40.0 bits (92), Expect = 0.001
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 99 LPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQL 158
+P+ + V EL V+ P +P+ +P +VP++ V PE P ++
Sbjct: 10701 VPEKKAPAVVAKKPELPPVKVPEVPKEVVPEKKVPLV-----------VPKKPEAPPAKV 10749
Query: 159 PVLPGPELPGFQVAVPPVPELPGVPASSTARVP 191
P +P +P +VAVP PE+P + P
Sbjct: 10750 PEVPKEVVPEKKVAVPKKPEVPPAKVPEVPKKP 10782
Score = 35.8 bits (81), Expect = 0.024
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 15/87 (17%)
Query: 107 PVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPEL 166
P +P T++ EV P+ +P +VPV P PE P ++P P +
Sbjct: 10488 PRVPPTKVPEV---LPPKEVVPEKKVPVPPA-----------KKPEAPPPKVPEAPKEVV 10533
Query: 167 PGFQVAVPPVPELPGVPASSTARVPGA 193
P +V VPP P+ P VP + VP A
Sbjct: 10534 PEKKVPVPP-PKKPEVPPTKVPEVPKA 10559
Score = 32.0 bits (71), Expect = 0.35
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 99 LPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLG--LPGFWFPVLPVPELPEF 156
+P+ + P E + P P+ +P +VPV P +P P +P +PE
Sbjct: 10505 VPEKKVPVPPAKKPEAPPPKVPEAPKEVVPEKKVPVPPPKKPEVPPTKVPEVPKAAVPEK 10564
Query: 157 QLPVL-------PGPELPGFQVAVPPVPELPGVPASSTARVP 191
++P P PE+P V P ++P P P
Sbjct: 10565 KVPEAIPPKPESPPPEVPEAPKEVVPEKKVPAAPPKKPEVTP 10606
Score = 31.2 bits (69), Expect = 0.59
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 98 KLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQ 157
K+P P +P T++ EV A+P ++P P P P PE+PE
Sbjct: 10537 KVPVPPPKKPEVPPTKVPEVPKAAVPEKKVPEAIPPK-----------PESPPPEVPEAP 10585
Query: 158 LPVLPGPELPGFQVAVPPVPELPGV 182
V+P ++P A P PE+ V
Sbjct: 10586 KEVVPEKKVP---AAPPKKPEVTPV 10607
Score = 30.8 bits (68), Expect = 0.77
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 110 PDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGF 169
P ++ EV +P ++P VPV + P P +P +PE ++PV P P+
Sbjct: 10000 PPAKVPEVPKKPVPEEKVP---VPVPKKVEAPPAKVPEVPKKPVPEKKVPV-PAPK---- 10051
Query: 170 QVAVPP--VPELP 180
+V PP VPE+P
Sbjct: 10052 KVEAPPAKVPEVP 10064
Score = 30.8 bits (68), Expect = 0.77
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 19/126 (15%)
Query: 68 PGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCPAL--PRS 125
P +T P VP+ + +P L +K+P+ +P + E + P + +
Sbjct: 10691 PQVTVPPKKP-VPEKKAPAVVAKKPELPPVKVPE-------VPKEVVPEKKVPLVVPKKP 10742
Query: 126 ELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELPGVPAS 185
E P +VP +P +P V PE+P ++P +P P + E P VP
Sbjct: 10743 EAPPAKVPEVPKEVVPEKKVAVPKKPEVPPAKVPEVP---------KKPVLEEKPAVPVP 10793
Query: 186 STARVP 191
A P
Sbjct: 10794 ERAESP 10799
Score = 30.4 bits (67), Expect = 1.0
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 79 VPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGL 138
VP+ + +P ++ +K+P++ V+P+ +V P + E+P +VP +P +
Sbjct: 10589 VPEKKVPAAPPKKPEVTPVKVPEAPKE--VVPE---KKVPVPPPKKPEVPPTKVPEVPKV 10643
Query: 139 GLPGFWFP--VLPVPELPE---FQLPVLPGPELPGFQVAVPPVPELP 180
+P P + P PE P F+ P E P +V P P P
Sbjct: 10644 AVPEKKVPEAIPPKPESPPPEVFEEPEEVALEEPPAEVVEEPEPAAP 10690
Score = 28.9 bits (63), Expect = 2.9
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 122 LPRSELPG-FQVPVLPGLGLPGFWFPVLPVP---ELPEFQLPVLPGPELPGFQVAVPPVP 177
+P+ E P +VP +P +P PV PVP E P ++P +P +P +V V P P
Sbjct: 9993 IPKKEKPPPAKVPEVPKKPVPEEKVPV-PVPKKVEAPPAKVPEVPKKPVPEKKVPV-PAP 10050
Query: 178 ELPGVPASSTARVP 191
+ P + VP
Sbjct: 10051 KKVEAPPAKVPEVP 10064
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 39.7 bits (91), Expect = 0.002
Identities = 49/178 (27%), Positives = 64/178 (35%), Gaps = 24/178 (13%)
Query: 19 GPITVLVTVLEHER----RVVVVLPEVTFSLPVLSSLSPLEVTSFSVWYSLLVPGLTFPD 74
GP+T TV E V V PE S P + +P E TS P P
Sbjct: 973 GPVTPATTVHAPEEPDTAAVRVSTPEEPAS-PAAAVPTPEEPTS---------PAAAVPT 1022
Query: 75 TSSNVPQSGLLGLAFPE-PGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVP 133
P S + PE P +P E P P + + P P + +P + P
Sbjct: 1023 PEE--PTSPAAAVPPPEEPTSPAAAVPTPEE--PTSPAAAVPTPEEPTSPAAAVPTPEEP 1078
Query: 134 VLPGLGLPGFWFPV-----LPVPELPEFQLPVLPGPELPGFQVAVPPVPELPGVPASS 186
P +P P +P PE P +P PE P A P PE P PA++
Sbjct: 1079 TSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAA 1136
Score = 38.1 bits (87), Expect = 0.005
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 107 PVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPV-----LPVPELPEFQLPVL 161
P P + + P P + +P + P P +P P +P PE P +
Sbjct: 1065 PTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAV 1124
Query: 162 PGPELPGFQVAVPPVPELPGVPA 184
P PE P A P PE P PA
Sbjct: 1125 PTPEEPASPAAAVPTPEEPAFPA 1147
Score = 37.0 bits (84), Expect = 0.011
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 107 PVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPV-----LPVPELPEFQLPVL 161
P P + + P P + +P + P P +P P +P PE P F P +
Sbjct: 1091 PTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAV 1150
Query: 162 PGPELPGFQVAVPPVPELPGVPASS 186
P PE P PE PA++
Sbjct: 1151 PTPEESASAAVAVPTPEESASPAAA 1175
Score = 34.7 bits (78), Expect = 0.053
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 8/90 (8%)
Query: 107 PVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPV-----LPVPELPEFQLPVL 161
P P + + P P + +P + P P +P P +P PE P +
Sbjct: 1078 PTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAV 1137
Query: 162 PGPELPGFQVAVPPVPELPGVPASSTARVP 191
P PE P F P PE AS+ VP
Sbjct: 1138 PTPEEPAFPAPAVPTPE---ESASAAVAVP 1164
Score = 33.1 bits (74), Expect = 0.16
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 90 PEPGLSGLKLPDSECHCPVLPDTELSEVQCPA--LPRSELPGFQVPVLPGLGLPGFWFPV 147
P + L+ P S + P+ E+ PA +P E P + L P
Sbjct: 1244 PAAAVPTLEEPTSSAAAVLTPE----ELSSPAASVPTPEEPASPAAAVSNLEEPASPAAA 1299
Query: 148 LPVPELPEFQLPVLPGPELPGF-QVAVPPVPELP--GVP 183
+P PE+ +P PE+P AVPP+ E+ GVP
Sbjct: 1300 VPTPEVAAIPAASVPTPEVPAIPAAAVPPMEEVSPIGVP 1338
Score = 32.7 bits (73), Expect = 0.20
Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 26/172 (15%)
Query: 34 VVVVLPEVTFSLPVLSSLSPLEVTSFSVWYSLLVPGLTFPDTSSNVPQSGLLGLA-FPEP 92
V V PE + S P + +P E SF+ + L T P S P + + L F P
Sbjct: 1161 VAVPTPEESAS-PAAAVPTPAESASFAAVVATLEEP-TSPAASVPTPAAMVATLEEFTSP 1218
Query: 93 GLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVL-------------PGLG 139
S +P SE P +S + P P + +P + P P
Sbjct: 1219 AAS---VPTSEE--PASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAAS 1273
Query: 140 LPGFWFPVLPVPELPEFQLPV-----LPGPELPGFQVAVPPVPELPGVPASS 186
+P P P + + P +P PE+ A P PE+P +PA++
Sbjct: 1274 VPTPEEPASPAAAVSNLEEPASPAAAVPTPEVAAIPAASVPTPEVPAIPAAA 1325
Score = 30.4 bits (67), Expect = 1.0
Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Query: 107 PVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLP-----GFWFPVLPVPELPEFQLPVL 161
P P + + PA P + +P + P P +P F P +P PE +
Sbjct: 1104 PTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAV 1163
Query: 162 PGPELPGFQVAVPPVP 177
P PE A P P
Sbjct: 1164 PTPEESASPAAAVPTP 1179
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 39.7 bits (91), Expect = 0.002
Identities = 37/115 (32%), Positives = 45/115 (39%), Gaps = 19/115 (16%)
Query: 82 SGLLGLAFPEPG------LSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGF----Q 131
S +LGL +PG L G+ LP + P LP L + P S LPGF
Sbjct: 3026 SDVLGLTVQQPGMMDSSSLHGISLPTAYPGLPGLPPVLLPGMNGP----SSLPGFPQNSN 3081
Query: 132 VPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELPGVPASS 186
PG G+ GF P L + P P Q PP P P P+SS
Sbjct: 3082 TLTPPGAGMLGF-----PTSATSSPALSLSSAPTKPLLQTPPPPPPPPPPPPSSS 3131
>gi|21359951 RNA binding motif protein 42 [Homo sapiens]
Length = 480
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 19/76 (25%)
Query: 136 PGLGLPGFWFPVLPVP------------------ELPEFQLPVLPGPELPGFQVAVPPVP 177
P GLPG PV+P P E+ F+ VL P +PG AVP VP
Sbjct: 6 PAPGLPGAGGPVVPGPGAGIPGKSGEERLKEMEAEMALFEQEVLGAP-VPGIPTAVPAVP 64
Query: 178 ELPGVPASSTARVPGA 193
+P VP +VP A
Sbjct: 65 TVPTVPTVEAMQVPAA 80
Score = 28.5 bits (62), Expect = 3.8
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 159 PVLPGPELPGFQVAVPPVPELPGVPASSTA 188
P LPGP PG + +PP+ PG P S A
Sbjct: 195 PPLPGP--PGPPMMLPPMARAPGPPLGSMA 222
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 38.5 bits (88), Expect = 0.004
Identities = 58/197 (29%), Positives = 83/197 (42%), Gaps = 33/197 (16%)
Query: 2 PDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLS---SLSPLEVTS 58
P +P+ V+ + P I P+T + V V P V +P L+ S+ P +T
Sbjct: 2708 PGDDPVVPVTPGDDPVI-PVTPA-----DDGPFVPVTPAVGPVVPDLTADDSVVPDSLTD 2761
Query: 59 FSVWYSLLVPGLTFPDT--SSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVL--PDTEL 114
V GL PDT S+ P+ + +P ++G + DS CPV+ P T+
Sbjct: 2762 DPVISVCPDDGLVVPDTVRDSDGPEVSV----YP---VTGPVVTDSAADCPVVSVPLTDG 2814
Query: 115 SEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVP 174
V CP E+P V GL +P PV + P F P + GP +P P
Sbjct: 2815 LVVLCPP---DEVPAVHDSVTNGLVVPD------PVIDGPVFSNPSVDGPIVPVASADNP 2865
Query: 175 PVPE----LPGVPASST 187
VP+ P VP ST
Sbjct: 2866 GVPDPIRAFPVVPKPST 2882
Score = 37.7 bits (86), Expect = 0.006
Identities = 60/218 (27%), Positives = 84/218 (38%), Gaps = 36/218 (16%)
Query: 2 PDSEPLDSVSLTNSPNIGPIT---VLVTVLEHERRVVVVL----PEVTFS------LPVL 48
PD P+ V +T+ P + +T ++V+V VV V P+VT + +P
Sbjct: 3160 PDEVPVVLVPITDGPVVPDLTTDGLVVSVTPAGAPVVPVFLTDCPDVTVTPADSPVVPDP 3219
Query: 49 SSLSPLEVTSFSVWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPV 108
SS P V + S+ LVP P S VP S GL P+P G PD PV
Sbjct: 3220 SSDGP--VVADSLDDDGLVP--VTPADDSVVPDSPANGLVVPDPTTDGPVAPDPSVDGPV 3275
Query: 109 LPDT-------ELSEVQCPALPRSELPGFQV-------PVLPGLGLPGFWFPVLPVPELP 154
+P T ++ CP + + G V PV+ GL PV+
Sbjct: 3276 VPVTPADAPTVSVTLADCPDVTVTPPDGLVVSDSKRGGPVVTGLSTND---PVITATPAD 3332
Query: 155 EFQLPVLPG--PELPGFQVAVPPVPELPGVPASSTARV 190
+ V P ++P P VP P P S V
Sbjct: 3333 FSDVTVTPADFEDVPVTPANCPDVPVNPESPVVSDLAV 3370
Score = 37.4 bits (85), Expect = 0.008
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 25/196 (12%)
Query: 2 PDSEPLDSVSLTNSPNIGPIT----VLVTVLEHERRVVVVLPEVTFSLPVLSSLSPL--- 54
P P+ SV+ +SP + P+T V+V V + V+ V P + ++PV + SP+
Sbjct: 2140 PADSPVISVASADSPVV-PVTPADTVVVPVTPADGPVIPVTPAESPAIPVTPADSPVVPV 2198
Query: 55 -----EVTSFSVWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVL 109
V + S +VP P + VP + P G +P + P++
Sbjct: 2199 TPADDPVVPVTPADSPIVP--VPPASDPVVPVTPADTPGSPVASADGPVVPVTSADSPLV 2256
Query: 110 PDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGF 169
P T P P PV P G PV PV + PV P + P F
Sbjct: 2257 PVTPGDSPVVPVTPADS------PVFPVTSADG---PVFPVTLADDPVFPVTPADD-PIF 2306
Query: 170 QVAVPPVPELPGVPAS 185
V+ P +P PA+
Sbjct: 2307 PVSPADSPVVPVTPAN 2322
Score = 33.9 bits (76), Expect = 0.091
Identities = 47/169 (27%), Positives = 63/169 (37%), Gaps = 31/169 (18%)
Query: 36 VVLPEVTFSLPVLSSLSPLEVTSFSVWYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLS 95
+V PE +PV+ P +T V + G D S + G+ P S
Sbjct: 3505 LVAPEPPDEVPVV----PDPITDSLVVSDPMTDGPVASDPSID-------GIVVPVVSPS 3553
Query: 96 GLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQV-------PVLPGLGLPGFWFPVL 148
GL + DS +LPDT P P + G V PV+P L GF L
Sbjct: 3554 GLLVLDSVADVSILPDT---SADVPVTPVTLADGSVVPDSAPDCPVVPVLPTDGFVVLDL 3610
Query: 149 PVPEL----PEFQLPVLPGPELPG------FQVAVPPVPELPGVPASST 187
V + P PV+P P G F + P P+ P VP + T
Sbjct: 3611 LVDGVVVPNPADVGPVVPDPTTDGPDSIKDFPLVPDPWPDCPVVPVTRT 3659
Score = 30.0 bits (66), Expect = 1.3
Identities = 41/145 (28%), Positives = 57/145 (39%), Gaps = 29/145 (20%)
Query: 23 VLVTVLEHERRVVVVLPEVTFSLPVLSSLSPL--------EVTSFSVWYSLLVPGLTFPD 74
V+V V + V +V P +P L++ P+ V S+ LLVP D
Sbjct: 3672 VVVPVTPGDDSVALVTPTDNLVVPDLTTDGPVVPDPSADGPVVLVSLADDLLVPNPPVKD 3731
Query: 75 TSSNVPQS---GLLGL-------AFPEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPR 124
T VP S + L PEP +GL + DS PV+PD + P +
Sbjct: 3732 TV--VPNSVADNPVALDPVTDCPLVPEPSANGLVVTDSLDEGPVVPDPSADD---PVVLN 3786
Query: 125 SELPGFQVPVLPGLGLPGFWFPVLP 149
E G VP + G PV+P
Sbjct: 3787 PETNGLVVPDISANG------PVVP 3805
Score = 29.6 bits (65), Expect = 1.7
Identities = 46/210 (21%), Positives = 77/210 (36%), Gaps = 33/210 (15%)
Query: 2 PDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFSV 61
P + P+ V+ + P + I V V+V+P ++ L+ V S ++
Sbjct: 1531 PANGPVIHVTSADCPFVPVIPADGLVALDSSTDVLVVPVSPTDGVLVPDLADDPVVSVTI 1590
Query: 62 WYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSE----- 116
S ++P P S+ VP + G P + +P + + PV P T + +
Sbjct: 1591 ADSPVIP--VTPADSTVVPVTLADGPVVPVTSVDIPVVPVTPANGPVAPVTPVDDPVVSV 1648
Query: 117 ------------VQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPV--PELPEFQLPVLP 162
CP +P + G VPV P P++PV + P +
Sbjct: 1649 NPADGSVVPVTSADCPVVPVTPADGLVVPVTPADS------PIVPVTPADSPVVLVTSAD 1702
Query: 163 GPELPGFQVAVPPVP------ELPGVPASS 186
P +P P VP + PG P +S
Sbjct: 1703 SPVIPVTPADSPVVPVTSADTDSPGSPVTS 1732
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 38.5 bits (88), Expect = 0.004
Identities = 28/92 (30%), Positives = 34/92 (36%), Gaps = 4/92 (4%)
Query: 101 DSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPV 160
D E +P ++ CP P PG P + P P+ P P P P
Sbjct: 638 DMEISDDEMPSAPITSADCPK-PMVVTPGAAAVAAPSVLAPTL--PLPPPPGFPPLPPPP 694
Query: 161 LPGPELPGFQVAVP-PVPELPGVPASSTARVP 191
P P PGF + P P P P PA VP
Sbjct: 695 PPPPPQPGFPMPPPLPPPPPPPPPAHPAVTVP 726
Score = 35.4 bits (80), Expect = 0.031
Identities = 27/75 (36%), Positives = 29/75 (38%), Gaps = 19/75 (25%)
Query: 117 VQCPALPRSELPGFQV--------PVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPG 168
V P LP PGF P PG +P P LP P P P P P
Sbjct: 674 VLAPTLPLPPPPGFPPLPPPPPPPPPQPGFPMP----PPLPPPPPP-------PPPAHPA 722
Query: 169 FQVAVPPVPELPGVP 183
V PP+P PGVP
Sbjct: 723 VTVPPPPLPAPPGVP 737
Score = 27.3 bits (59), Expect = 8.5
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 20/114 (17%)
Query: 73 PDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHC-PVLPDTELSEVQCPALPRSELPGFQ 131
P TS++ P+ ++ PG + + P P+ P + P P PGF
Sbjct: 650 PITSADCPKPMVV-----TPGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPPPPQPGFP 704
Query: 132 VP--VLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVPELPGVP 183
+P + P P P + VP P LP PG VPP P LP +P
Sbjct: 705 MPPPLPPPPPPPPPAHPAVTVPPPP---LPAPPG---------VPPPPILPPLP 746
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/101 (37%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 107 PVLPDTELSEVQCPALPRS-ELPGFQVPVLPGL--------GLPGFWFPVLPVPELPEFQ 157
PVLP + V PALP + PG PV+P G+P P P LP
Sbjct: 536 PVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPS 595
Query: 158 L------PVLPGPELPGFQVAVPPVPELPGVPASSTARVPG 192
L PVLP P L A PPV LP P SS PG
Sbjct: 596 LSSAGPPPVLPPPSLS--STAPPPVMPLP--PLSSATPPPG 632
Score = 32.0 bits (71), Expect = 0.35
Identities = 30/80 (37%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 107 PVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFP-VLPVPELPEFQLPVLPGPE 165
PV+P + + V P +P S PVLP L P VLP P L P P
Sbjct: 563 PVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPP--PVMP 620
Query: 166 LPGFQVAVPP--VPELPGVP 183
LP A PP +P PGVP
Sbjct: 621 LPPLSSATPPPGIP-PPGVP 639
Score = 30.4 bits (67), Expect = 1.0
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 120 PALPRSE----LPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPP 175
P +P S+ LP PVLP P P LP P P + P LP +VPP
Sbjct: 519 PFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLP---TSVPP 575
Query: 176 VPELPGVPASSTARVP 191
PG+P S ++ P
Sbjct: 576 ----PGMPPSLSSAGP 587
Score = 27.7 bits (60), Expect = 6.5
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 148 LPVPELPEFQLPVLPGPELPGFQVAVPPVPELPGVPASS 186
LP P LP PV+PG +Q PP+P PG PA S
Sbjct: 81 LPPPPLPP--PPVMPGGGYGDWQPPPPPMPPPPG-PALS 116
>gi|29826294 golgi reassembly stacking protein 2 [Homo sapiens]
Length = 452
Score = 37.0 bits (84), Expect = 0.011
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 21/98 (21%)
Query: 120 PALPRSELPGFQVPVLPGLGLPGFWFPVL-PVPELPEFQLP-----VLPGPELPGFQV-- 171
P LP L ++PG+GLP P L P+P +P LP LP LP F +
Sbjct: 313 PNLPNLNLNLPAPHIMPGVGLPELVNPGLPPLPSMPPRNLPGIAPLPLPSEFLPSFPLVP 372
Query: 172 -------------AVPPVPELPGVPASSTARVPGAFRL 196
++PP P PA++TA+ A L
Sbjct: 373 ESSSAASSGELLSSLPPTSNAPSDPATTTAKADAASSL 410
Score = 28.9 bits (63), Expect = 2.9
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 133 PVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPE-LPGFQVAVPPVPELPGVPASSTARVP 191
P+ P LPG +P LP L LP P +PG + P LP +P+ +P
Sbjct: 295 PMNPATTLPGLMPLPAGLPNLPNLNLN-LPAPHIMPGVGLPELVNPGLPPLPSMPPRNLP 353
Query: 192 G 192
G
Sbjct: 354 G 354
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 36.6 bits (83), Expect = 0.014
Identities = 35/99 (35%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 107 PVLPDTELSEVQCPALPRSELPGFQVPVLPGLG------------LPGFW-FPVLPVPEL 153
P P L V ALP + P P LPGLG LPG F P P L
Sbjct: 439 PPPPPPPLPSVGAKALPTAPPP----PPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPL 494
Query: 154 PEFQLPVLPGPELPGFQVAVPPVPELPGVPASSTARVPG 192
P P P P LPG PP P P +P + + V G
Sbjct: 495 PGLGCPPPPPPLLPGMGWGPPPPPP-PLLPCTCSPPVAG 532
Score = 30.8 bits (68), Expect = 0.77
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 90 PEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLP 149
P PGL + P P+ E P LP P P+LPG+G W P P
Sbjct: 462 PLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPLLPGMG----WGPPPP 517
Query: 150 VPELPEFQLPVLPGPELPG 168
P L LP P + G
Sbjct: 518 PPPL----LPCTCSPPVAG 532
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 36.6 bits (83), Expect = 0.014
Identities = 35/99 (35%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 107 PVLPDTELSEVQCPALPRSELPGFQVPVLPGLG------------LPGFW-FPVLPVPEL 153
P P L V ALP + P P LPGLG LPG F P P L
Sbjct: 439 PPPPPPPLPSVGAKALPTAPPP----PPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPL 494
Query: 154 PEFQLPVLPGPELPGFQVAVPPVPELPGVPASSTARVPG 192
P P P P LPG PP P P +P + + V G
Sbjct: 495 PGLGCPPPPPPLLPGMGWGPPPPPP-PLLPCTCSPPVAG 532
Score = 30.8 bits (68), Expect = 0.77
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 90 PEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLP 149
P PGL + P P+ E P LP P P+LPG+G W P P
Sbjct: 462 PLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPLLPGMG----WGPPPP 517
Query: 150 VPELPEFQLPVLPGPELPG 168
P L LP P + G
Sbjct: 518 PPPL----LPCTCSPPVAG 532
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 36.6 bits (83), Expect = 0.014
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Query: 107 PVLPDTELSEVQC-PALPRSELPGFQ--VPVLPGLGLPGFWFPVLPVPELPEFQLPVLPG 163
P+ P + LS+ P L LP +P+LP G PG P + Q P P
Sbjct: 236 PLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGL--KAEPASPAQDAQEPPAPP 293
Query: 164 PELPGFQVAVP----PVPELPGVPASSTARVP 191
P LP + P P P LPGV +SS P
Sbjct: 294 PPLPPYASCSPRASLPAPPLPGVNSSSETPPP 325
Score = 35.0 bits (79), Expect = 0.041
Identities = 37/129 (28%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 73 PDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPD-----------TELSEVQCPA 121
P T +P + +L +P L+ L LP P+LP + + Q P
Sbjct: 231 PPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDAQEPP 290
Query: 122 LPRSELPGF---------QVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVA 172
P LP + P LPG+ P LP P+ P FQ P P+ G Q A
Sbjct: 291 APPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLP-PKSPSFQAP----PQKAGAQ-A 344
Query: 173 VPPVPELPG 181
+P P PG
Sbjct: 345 LPAPPAPPG 353
>gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens]
Length = 511
Score = 36.6 bits (83), Expect = 0.014
Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 17/98 (17%)
Query: 107 PVLPDTELSEVQCPALPRSELPGFQVPVLP-GLGLPGFWFPVLPVPELPEFQLPVLPGPE 165
PV PD LS + P + + PG V + P LG PG P P P P P P
Sbjct: 307 PVQPDCILSGSRPPGV---KTPGPPVALFPFHLGAPG---PPAPPPSAPSGPAPAPPPAF 360
Query: 166 LPGFQVAVPPVPELPGVPASST----------ARVPGA 193
P Q P +L VPA S AR PGA
Sbjct: 361 YPTLQPEAAPSTQLGEVPAPSAAPTTAPSGTPARTPGA 398
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 35.8 bits (81), Expect = 0.024
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 115 SEVQCPALPRSELPGFQVPVLPGL-GLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAV 173
S V A P + +P +P +P + LP P+P +P +P P P LP V
Sbjct: 173 STVPSTASPMNTVPPPPIPPIPAMPSLP-------PMPSIPPIPVPP-PVPTLP----PV 220
Query: 174 PPVPELPGVPA 184
PPVP +P VP+
Sbjct: 221 PPVPPIPPVPS 231
Score = 28.1 bits (61), Expect = 5.0
Identities = 30/125 (24%), Positives = 43/125 (34%), Gaps = 23/125 (18%)
Query: 79 VPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGL 138
+P +GL G+ P GL G LP + LP S + LP + +P +P G
Sbjct: 652 MPNAGLPGVGLPSAGLPGAGLPSTG-----LPG---SAITSAGLPGAGMPSAGIPSAGGE 703
Query: 139 GLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVP-----------ELPGVPASST 187
P F P G PP+P PG+P+
Sbjct: 704 EHAFLTVGSKEANNGPPFNFP----GNFGGSNAFGPPIPPPGLGGGAFGDARPGMPSVGN 759
Query: 188 ARVPG 192
+ +PG
Sbjct: 760 SGLPG 764
Score = 27.3 bits (59), Expect = 8.5
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 136 PGLGLPGFWFPVLPVPELPEFQLPVLPGPELP--GFQVAVPPVPELPGVPASSTARVPGA 193
P G G PV P +P LPG LP G A P LPG A ++A +PGA
Sbjct: 632 PAQGKKGLKMPVPGNPAVPGMPNAGLPGVGLPSAGLPGAGLPSTGLPG-SAITSAGLPGA 690
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 35.8 bits (81), Expect = 0.024
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 115 SEVQCPALPRSELPGFQVPVLPGL-GLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAV 173
S V A P + +P +P +P + LP P+P +P +P P P LP V
Sbjct: 173 STVPSTASPMNTVPPPPIPPIPAMPSLP-------PMPSIPPIPVPP-PVPTLP----PV 220
Query: 174 PPVPELPGVPA 184
PPVP +P VP+
Sbjct: 221 PPVPPIPPVPS 231
Score = 28.1 bits (61), Expect = 5.0
Identities = 30/125 (24%), Positives = 43/125 (34%), Gaps = 23/125 (18%)
Query: 79 VPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGL 138
+P +GL G+ P GL G LP + LP S + LP + +P +P G
Sbjct: 652 MPNAGLPGVGLPSAGLPGAGLPSTG-----LPG---SAITSAGLPGAGMPSAGIPSAGGE 703
Query: 139 GLPGFWFPVLPVPELPEFQLPVLPGPELPGFQVAVPPVP-----------ELPGVPASST 187
P F P G PP+P PG+P+
Sbjct: 704 EHAFLTVGSKEANNGPPFNFP----GNFGGSNAFGPPIPPPGLGGGAFGDARPGMPSVGN 759
Query: 188 ARVPG 192
+ +PG
Sbjct: 760 SGLPG 764
Score = 27.3 bits (59), Expect = 8.5
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 136 PGLGLPGFWFPVLPVPELPEFQLPVLPGPELP--GFQVAVPPVPELPGVPASSTARVPGA 193
P G G PV P +P LPG LP G A P LPG A ++A +PGA
Sbjct: 632 PAQGKKGLKMPVPGNPAVPGMPNAGLPGVGLPSAGLPGAGLPSTGLPG-SAITSAGLPGA 690
>gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens]
Length = 1796
Score = 35.8 bits (81), Expect = 0.024
Identities = 49/178 (27%), Positives = 69/178 (38%), Gaps = 23/178 (12%)
Query: 7 LDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFSVWYSLL 66
LDS + I P T + +V + R +VV E T SL V +S +V F V Y
Sbjct: 713 LDSFWTEPATTIVPTTSVTSVFQTGIRNLVVGDETTSSLRVKWDISDSDVQQFRVTYM-- 770
Query: 67 VPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSE 126
T+ P+ ++G + L L P+LPDTE P E
Sbjct: 771 --------TAQGDPEEEVIGTVMVPGSQNNLLLK------PLLPDTEYKVTVTPIYTDGE 816
Query: 127 LPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVL---PGPELPGFQVAVPPVPELPG 181
G V PG LP L V E +L + P + G+++ PV +PG
Sbjct: 817 --GVSVSA-PGKTLPSSGPQNLRVSEEWYNRLRITWDPPSSPVKGYRIVYKPV-SVPG 870
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 35.0 bits (79), Expect = 0.041
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 118 QCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLPVLPGPELPGFQV-AVPPV 176
QCP P SE+ P L G G P+L VP P PE V +P
Sbjct: 1903 QCPGTPSSEMEQLDRPGLSQPGALGIANPLLAVP---------APSPEHSSPSVRLLPSA 1953
Query: 177 PE-LPGVPASSTARVP 191
P+ LP P +S ARVP
Sbjct: 1954 PQTLPDGPLASPARVP 1969
Score = 28.9 bits (63), Expect = 2.9
Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 18/104 (17%)
Query: 106 CPVLPDTELSEVQCPALPRSELPGFQVPVL------PGLGLPGFWF-----------PVL 148
CP P +E+ ++ P L + G P+L P P P+
Sbjct: 1904 CPGTPSSEMEQLDRPGLSQPGALGIANPLLAVPAPSPEHSSPSVRLLPSAPQTLPDGPLA 1963
Query: 149 PVPELPEFQLPVLPGPELPGFQVAVPPVPELPGVPASSTARVPG 192
+P F +P+ PGP PG V P P L + S PG
Sbjct: 1964 SPARVPMFPVPLPPGPLEPG-PGCVTPGPALGFLEPSGPGLPPG 2006
>gi|119120861 formin-like 3 isoform 2 [Homo sapiens]
Length = 976
Score = 34.7 bits (78), Expect = 0.053
Identities = 35/95 (36%), Positives = 39/95 (41%), Gaps = 17/95 (17%)
Query: 91 EPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPV 150
EP + GL+ DSE V P ELSE +P S+L P LP P P
Sbjct: 421 EPNVRGLESVDSEALARVGP-AELSE----GMPPSDLDLLAPAPPPEEVLP---LPPPPA 472
Query: 151 PELPEFQLPVLPGPELPGFQVAVPPVPELPGVPAS 185
P LP P P LP PP P LPG S
Sbjct: 473 PPLPP------PPPPLPD---KCPPAPPLPGAAPS 498
>gi|119120874 formin-like 3 isoform 1 [Homo sapiens]
Length = 1027
Score = 34.7 bits (78), Expect = 0.053
Identities = 35/95 (36%), Positives = 39/95 (41%), Gaps = 17/95 (17%)
Query: 91 EPGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPV 150
EP + GL+ DSE V P ELSE +P S+L P LP P P
Sbjct: 472 EPNVRGLESVDSEALARVGP-AELSE----GMPPSDLDLLAPAPPPEEVLP---LPPPPA 523
Query: 151 PELPEFQLPVLPGPELPGFQVAVPPVPELPGVPAS 185
P LP P P LP PP P LPG S
Sbjct: 524 PPLPP------PPPPLPD---KCPPAPPLPGAAPS 549
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 34.3 bits (77), Expect = 0.070
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 98 KLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPV-LPGLGLPGFWFPVLPVPELPEF 156
++P E P + V PA+P +P GLG+P P LP P L
Sbjct: 846 QVPSQEMPLLARPSPPVQSVS-PAVPTPPSMSAALPFPAGGLGMP----PSLPPPPLQPP 900
Query: 157 QLPVLPGPELPGFQVAVPPVPELPGVPASSTARVP 191
LP+ GP LP P+P P P S + P
Sbjct: 901 SLPLSMGPVLPDPFTHYAPLPSWPCYPHVSPSGYP 935
Score = 30.0 bits (66), Expect = 1.3
Identities = 55/198 (27%), Positives = 74/198 (37%), Gaps = 22/198 (11%)
Query: 2 PDSEPLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFSV 61
P EP S + +SP + + +L V + + P +S+ P +
Sbjct: 829 PSPEPPVSKPVASSPTEQVPSQEMPLLARPSPPVQSVSPAVPTPPSMSAALPFPAGGLGM 888
Query: 62 WYSLLVPGLTFPDTSSNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEVQCPA 121
SL P L P ++P S +G P+P LP C+ V P P
Sbjct: 889 PPSLPPPPLQPP----SLPLS--MGPVLPDPFTHYAPLPSWPCYPHVSPSGYPCLPPPPT 942
Query: 122 LPR-SELPG-FQVPVLPGLGLPGFWFPVLPVPELPEFQLPVL------PGPELPGFQVAV 173
+P S PG + VP P +P W P P P P PGP+ F V
Sbjct: 943 VPLVSGTPGAYAVP--PTCSVP--WAPP-PAPVSPYSSTCTYGPLGWGPGPQHAPFWSTV 997
Query: 174 PPVPELPGVPASSTARVP 191
PP P LP PAS VP
Sbjct: 998 PP-PPLP--PASIGRAVP 1012
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 34.3 bits (77), Expect = 0.070
Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 120 PALPRSELPGFQVPVLPGLGLPGFWFPVLPVPELPEFQLP---VLPGPELPGFQVAVPP- 175
PA P + PG PV G PG W P P P P P + P P P FQV P
Sbjct: 175 PAPPPPQAPGAAPPVPWGTVPPGAWGPPAPYP-APTGSYPTPGLYPTPSNP-FQVPSGPS 232
Query: 176 -VPELPGVPAS 185
P +PG P S
Sbjct: 233 GAPPMPGGPHS 243
>gi|71040090 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 33.9 bits (76), Expect = 0.091
Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 12/100 (12%)
Query: 92 PGLSGLKLPDSECHCPVLPDTELSEVQCPALPRSELPGFQVPVLPGLGLPGFWFPVLPVP 151
PG + L++ P+L P PRS +P +PV P + P L V
Sbjct: 315 PGANNLQVNALVARLPLL---------LPRAPRSLIP--PIPVSPPILAPRLSSGALKVA 363
Query: 152 ELPEFQLPVLPGPELPGFQVAVPPVPELPGVPASSTARVP 191
LP P +P + +P VP LPG P R P
Sbjct: 364 TLPLSSRAGAPPAAVPIINMILPTVPALPG-PGPGPGRAP 402
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.141 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,998,000
Number of Sequences: 37866
Number of extensions: 623641
Number of successful extensions: 3141
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 2375
Number of HSP's gapped (non-prelim): 662
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.