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Search of human proteins with 239741714
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo
sapiens]
(231 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo ... 468 e-132
gi|13162283 mal, T-cell differentiation protein-like [Homo sapiens] 239 1e-63
gi|169164947 PREDICTED: similar to mal, T-cell differentiation p... 170 1e-42
gi|169164253 PREDICTED: similar to mal, T-cell differentiation p... 170 1e-42
gi|169163277 PREDICTED: similar to mal, T-cell differentiation p... 170 1e-42
gi|4505091 T-lymphocyte maturation-associated protein isoform a ... 106 1e-23
gi|16418397 MAL2 proteolipid protein [Homo sapiens] 91 6e-19
gi|32130536 CKLF-like MARVEL transmembrane domain containing 8 [... 67 1e-11
gi|12408661 T-lymphocyte maturation-associated protein isoform b... 61 7e-10
gi|239741718 PREDICTED: hypothetical protein XP_002342296 [Homo ... 60 2e-09
gi|7705755 plasmolipin [Homo sapiens] 57 2e-08
gi|12408663 T-lymphocyte maturation-associated protein isoform c... 53 2e-07
gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [H... 41 0.001
gi|13489073 egl nine homolog 1 [Homo sapiens] 40 0.002
gi|123701326 zinc finger protein 831 [Homo sapiens] 40 0.002
gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens] 39 0.005
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 37 0.011
gi|239757439 PREDICTED: hypothetical protein [Homo sapiens] 37 0.014
gi|239751956 PREDICTED: hypothetical protein [Homo sapiens] 37 0.014
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 37 0.014
gi|239746439 PREDICTED: hypothetical protein XP_002344222 [Homo ... 37 0.014
gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens] 36 0.032
gi|153285461 fibroblast growth factor 2 [Homo sapiens] 35 0.042
gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo ... 35 0.071
gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo ... 35 0.071
gi|61966741 TMF regulated nuclear protein [Homo sapiens] 35 0.071
gi|58218966 hypothetical protein LOC339201 [Homo sapiens] 35 0.071
gi|5031805 insulin receptor substrate 1 [Homo sapiens] 34 0.092
gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo ... 34 0.092
gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo sap... 34 0.12
>gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo
sapiens]
Length = 231
Score = 468 bits (1205), Expect = e-132
Identities = 231/231 (100%), Positives = 231/231 (100%)
Query: 1 MQFSLQASLQLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSREGPSAARPGGA 60
MQFSLQASLQLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSREGPSAARPGGA
Sbjct: 1 MQFSLQASLQLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSREGPSAARPGGA 60
Query: 61 SGLHEEGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGEEPQTHEIFGFLVW 120
SGLHEEGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGEEPQTHEIFGFLVW
Sbjct: 61 SGLHEEGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGEEPQTHEIFGFLVW 120
Query: 121 TMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGIL 180
TMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGIL
Sbjct: 121 TMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGIL 180
Query: 181 YMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH 231
YMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH
Sbjct: 181 YMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH 231
>gi|13162283 mal, T-cell differentiation protein-like [Homo sapiens]
Length = 153
Score = 239 bits (610), Expect = 1e-63
Identities = 118/118 (100%), Positives = 118/118 (100%)
Query: 114 IFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLY 173
IFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLY
Sbjct: 36 IFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLY 95
Query: 174 HGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH 231
HGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH
Sbjct: 96 HGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH 153
>gi|169164947 PREDICTED: similar to mal, T-cell differentiation
protein-like [Homo sapiens]
Length = 130
Score = 170 bits (430), Expect = 1e-42
Identities = 90/119 (75%), Positives = 96/119 (80%), Gaps = 5/119 (4%)
Query: 113 EIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSL 172
EIFGF VW +VA T + PLLQGWVMYVSLT FLISL+FLLS LFG FESWRVLDSL
Sbjct: 17 EIFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSLFG----FESWRVLDSL 72
Query: 173 YHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH 231
YHGTTGILYMSAAVLQVH I+SE D R Y IN+AA FFAF+ LLYILHAFSIYYH
Sbjct: 73 YHGTTGILYMSAAVLQVHVMIMSE-AQDLRNYCINTAALFFAFVTMLLYILHAFSIYYH 130
>gi|169164253 PREDICTED: similar to mal, T-cell differentiation
protein-like [Homo sapiens]
Length = 130
Score = 170 bits (430), Expect = 1e-42
Identities = 90/119 (75%), Positives = 96/119 (80%), Gaps = 5/119 (4%)
Query: 113 EIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSL 172
EIFGF VW +VA T + PLLQGWVMYVSLT FLISL+FLLS LFG FESWRVLDSL
Sbjct: 17 EIFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSLFG----FESWRVLDSL 72
Query: 173 YHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH 231
YHGTTGILYMSAAVLQVH I+SE D R Y IN+AA FFAF+ LLYILHAFSIYYH
Sbjct: 73 YHGTTGILYMSAAVLQVHVMIMSE-AQDLRNYCINTAALFFAFVTMLLYILHAFSIYYH 130
>gi|169163277 PREDICTED: similar to mal, T-cell differentiation
protein-like [Homo sapiens]
Length = 130
Score = 170 bits (430), Expect = 1e-42
Identities = 90/119 (75%), Positives = 96/119 (80%), Gaps = 5/119 (4%)
Query: 113 EIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSL 172
EIFGF VW +VA T + PLLQGWVMYVSLT FLISL+FLLS LFG FESWRVLDSL
Sbjct: 17 EIFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSLFG----FESWRVLDSL 72
Query: 173 YHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH 231
YHGTTGILYMSAAVLQVH I+SE D R Y IN+AA FFAF+ LLYILHAFSIYYH
Sbjct: 73 YHGTTGILYMSAAVLQVHVMIMSE-AQDLRNYCINTAALFFAFVTMLLYILHAFSIYYH 130
>gi|4505091 T-lymphocyte maturation-associated protein isoform a
[Homo sapiens]
Length = 153
Score = 106 bits (265), Expect = 1e-23
Identities = 58/142 (40%), Positives = 85/142 (59%)
Query: 84 APAAAMSGAGLAAVVSCLRPQPGEEPQTHEIFGFLVWTMVAATHIVYPLLQGWVMYVSLT 143
APAAA G+ L + S P IFG LVW +VA++ + +PL+QGWVM+VS+
Sbjct: 2 APAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVF 61
Query: 144 SFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRI 203
F+ + ++ Y+ G + SW LD+ YH T + Y+SA+VL+ ATI + R
Sbjct: 62 CFVATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRH 121
Query: 204 YYINSAASFFAFIATLLYILHA 225
Y+ N AA F++IATLLY++HA
Sbjct: 122 YHENIAAVVFSYIATLLYVVHA 143
>gi|16418397 MAL2 proteolipid protein [Homo sapiens]
Length = 176
Score = 91.3 bits (225), Expect = 6e-19
Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 11/119 (9%)
Query: 114 IFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFE-SWRVLDSL 172
+FG LVW +VA++++ PLLQGWVM+VS+T+F SL+FL +L G + + +W LD
Sbjct: 45 LFGGLVWILVASSNVPLPLLQGWVMFVSVTAFFFSLLFLGMFLSGMVAQIDANWNFLDFA 104
Query: 173 YHGTTGILYMSAAVLQVHA----------TIVSEKLLDPRIYYINSAASFFAFIATLLY 221
YH T + Y A +L+ A TI + LL Y IN AAS FAF+ T Y
Sbjct: 105 YHFTVFVFYFGAFLLEAAATSLHDLHCNTTITGQPLLSDNQYNINVAASIFAFMTTACY 163
>gi|32130536 CKLF-like MARVEL transmembrane domain containing 8
[Homo sapiens]
Length = 173
Score = 67.4 bits (163), Expect = 1e-11
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 101 LRPQPGEEPQTHEIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFY 160
LR PG + G LVWT++A T GWVM+V++ +++++ FL+ Y+ Y
Sbjct: 37 LRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTY 96
Query: 161 KRFES--WRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIAT 218
R W + ++G+ +LY+SAAV V A+ VS + D + +A+SFFAF+ T
Sbjct: 97 TRIPQVPWTTVGLCFNGSAFVLYLSAAV--VDASSVSPE-RDSHNFNSWAASSFFAFLVT 153
Query: 219 LLY 221
+ Y
Sbjct: 154 ICY 156
>gi|12408661 T-lymphocyte maturation-associated protein isoform b
[Homo sapiens]
Length = 111
Score = 61.2 bits (147), Expect = 7e-10
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 84 APAAAMSGAGLAAVVSCLRPQPGEEPQTHEIFGFLVWTMVAATHIVYPLLQGWVMYVSLT 143
APAAA G+ L + S P IFG LVW +VA++ + +PL+QGWVM+VS+
Sbjct: 2 APAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVF 61
Query: 144 SFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQV 189
F+ + ++ Y+ G + SW L Y T +LY+ AV +
Sbjct: 62 CFVATTTLIILYIIGAHGGETSWVTLVFSYIAT--LLYVVHAVFSL 105
>gi|239741718 PREDICTED: hypothetical protein XP_002342296 [Homo
sapiens]
Length = 248
Score = 59.7 bits (143), Expect = 2e-09
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 89 MSGAGLAAVVSCLRPQPGEEPQTHEIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLIS 148
MSGAGLAAVVSCLRPQPGEEPQTHE F V + + P Q W + L L +
Sbjct: 1 MSGAGLAAVVSCLRPQPGEEPQTHETFCQKVGLLCTLQGKLQP--QDWTLLDELLQGLQT 58
Query: 149 LMFLL 153
L+ ++
Sbjct: 59 LLLMI 63
>gi|7705755 plasmolipin [Homo sapiens]
Length = 182
Score = 56.6 bits (135), Expect = 2e-08
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Query: 93 GLAAVVSCLRPQPGEEPQT-------HEIFGFLVWTMVAAT-HIVYPLLQGWVMYVSLTS 144
G A VS LRP G + G LVW ++A T + +YP GWVM+V++
Sbjct: 18 GAEASVSALRPDLGFVRSRLGALMLLQLVLGLLVWALIADTPYHLYPAY-GWVMFVAVFL 76
Query: 145 FLISLMFLLSYLFGFYKR--FESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPR 202
+L++++ YLF + + W ++ +++ + +LY++ A + A + L R
Sbjct: 77 WLVTIVLFNLYLFQLHMKLYMVPWPLVLMIFNISATVLYIT-AFIACSAAVDLTSLRGTR 135
Query: 203 IYYINSAASFFAFIATLLYILHAFSIY 229
Y +AASFFA + + Y + AF Y
Sbjct: 136 PYNQRAAASFFACLVMIAYGVSAFFSY 162
>gi|12408663 T-lymphocyte maturation-associated protein isoform c
[Homo sapiens]
Length = 97
Score = 53.1 bits (126), Expect = 2e-07
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 170 DSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHA 225
D+ YH T + Y+SA+VL+ ATI + R Y+ N AA F++IATLLY++HA
Sbjct: 32 DAAYHCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHA 87
>gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [Homo
sapiens]
Length = 183
Score = 40.8 bits (94), Expect = 0.001
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 139 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGT--TGILYMSAAVLQV--HATIV 194
+VS ++FL+SL+ L+ Y FY+R ++ +V S ++ T TG +++ A+++ V H
Sbjct: 73 FVSCSAFLLSLLILIVYCTPFYERVDTTKVKSSDFYITLGTGCVFLLASIIFVSTHDRTS 132
Query: 195 SEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYY 230
+E AA F FIA+ +++L ++ Y
Sbjct: 133 AE-----------IAAIVFGFIASFMFLLDFITMLY 157
>gi|13489073 egl nine homolog 1 [Homo sapiens]
Length = 426
Score = 40.0 bits (92), Expect = 0.002
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 32 PAPPSPVLRPQAHPQRSREGPSAARPGGASGLHEEGRVRCGCRPDARASPLAAPAAAMSG 91
PAPP+ V P+A + R+ +AAR ASG +G+V+ +P A + A+P A +G
Sbjct: 77 PAPPAAVPPPRAGAREPRK--AAARRDNASGDAAKGKVKA--KPPADPAAAASPCRAAAG 132
Query: 92 AGLAAVVSCLRPQPGEEPQTHEIF 115
+AV + P E P +F
Sbjct: 133 GQGSAVAAEAEPGKEEPPARSSLF 156
>gi|123701326 zinc finger protein 831 [Homo sapiens]
Length = 1677
Score = 39.7 bits (91), Expect = 0.002
Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 6/130 (4%)
Query: 14 NSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRS-REGPSAARP----GGASGLHEEGR 68
+SG +RA+ G+G P PSP P S E PS +RP GA ++G
Sbjct: 969 SSGWPEERASFVGSGLGTPLSPSPASGPSPGEADSILEDPSCSRPQDGRKGAQLGGDKGD 1028
Query: 69 VRCGCRPDARASPLAAPAAAMSGAGLAAVVSC-LRPQPGEEPQTHEIFGFLVWTMVAATH 127
RP AR P++AP A +C E +H I + + +A
Sbjct: 1029 RMATSRPAARELPISAPGAPREATSSPPTPTCEAHLVQDMEGDSHRIHRLCMGSTLARAR 1088
Query: 128 IVYPLLQGWV 137
+ +L WV
Sbjct: 1089 LSGDVLNPWV 1098
>gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens]
Length = 236
Score = 38.5 bits (88), Expect = 0.005
Identities = 34/99 (34%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 10 QLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSREGPSAARPGGASGLHEEGRV 69
Q G +G A G G EPAP A P+ + EG AA GG EGR+
Sbjct: 12 QTGAANGDRDVPQAEVGRGRREPAP--------AQPEEAGEGAMAAARGGPVPAAREGRM 63
Query: 70 RCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGEE 108
A+ AAPAAA GA +AA G E
Sbjct: 64 ---------AAARAAPAAAARGAPVAAAALARAAAAGRE 93
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 37.4 bits (85), Expect = 0.011
Identities = 34/107 (31%), Positives = 37/107 (34%), Gaps = 26/107 (24%)
Query: 23 AREGAGAWEP-APPSPVLRPQAHPQRSREGPSAAR-------------------PGGASG 62
AREG AW AP P RP Q GP A R PGG S
Sbjct: 412 AREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDPGGGSR 471
Query: 63 LHEEGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGEEP 109
GC AR+SP A P G + V LR G+ P
Sbjct: 472 ARRRAARGRGCLRSARSSPHARP------LGSSRSVRLLRSAAGKGP 512
>gi|239757439 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 37.0 bits (84), Expect = 0.014
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 15/110 (13%)
Query: 1 MQFSLQASLQLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSR---EGPSAARP 57
+ F LQ + G G + + +R GAG EPA P P RP+A + PSA R
Sbjct: 52 LSFHLQPETREGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVR- 110
Query: 58 GGASGLHEEGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGE 107
GR C L AG+AA SCL P PG+
Sbjct: 111 --------SGRSLAACARVESWHFLPQSWRTAPSAGIAA--SCL-PHPGQ 149
>gi|239751956 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 37.0 bits (84), Expect = 0.014
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 15/110 (13%)
Query: 1 MQFSLQASLQLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSR---EGPSAARP 57
+ F LQ + G G + + +R GAG EPA P P RP+A + PSA R
Sbjct: 52 LSFHLQPETREGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVR- 110
Query: 58 GGASGLHEEGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGE 107
GR C L AG+AA SCL P PG+
Sbjct: 111 --------SGRSLAACARVESWHFLPQSWRTAPSAGIAA--SCL-PHPGQ 149
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 37.0 bits (84), Expect = 0.014
Identities = 34/107 (31%), Positives = 36/107 (33%), Gaps = 26/107 (24%)
Query: 23 AREGAGAWEP-APPSPVLRPQAHPQRSREGPSAAR-------------------PGGASG 62
AREG AW AP P RP Q GP A R PGG S
Sbjct: 412 AREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDPGGGSR 471
Query: 63 LHEEGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGEEP 109
GC AR+SP A P G + V LR G P
Sbjct: 472 ARRRAARGRGCLRSARSSPHARP------LGSSRSVRLLRSAAGRGP 512
>gi|239746439 PREDICTED: hypothetical protein XP_002344222 [Homo
sapiens]
Length = 243
Score = 37.0 bits (84), Expect = 0.014
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 15/110 (13%)
Query: 1 MQFSLQASLQLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSR---EGPSAARP 57
+ F LQ + G G + + +R GAG EPA P P RP+A + PSA R
Sbjct: 52 LSFHLQPETREGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVR- 110
Query: 58 GGASGLHEEGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGE 107
GR C L AG+AA SCL P PG+
Sbjct: 111 --------SGRSLAACARVESWHFLPQSWRTAPSAGIAA--SCL-PHPGQ 149
>gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens]
Length = 602
Score = 35.8 bits (81), Expect = 0.032
Identities = 28/83 (33%), Positives = 31/83 (37%), Gaps = 11/83 (13%)
Query: 13 HNSGVAMQRAAREGAGAWEPAPPS---PVLRPQAHPQRSREGPSAARPGGASGLHEEGRV 69
H SG A A + +P PP P PQ HPQ G R GG G
Sbjct: 24 HPSGGADDVAKKPPPAPQQPPPPPAPHPQQHPQQHPQNQAHGKGGHRGGGGGGGKSSS-- 81
Query: 70 RCGCRPDARASPLAAPAAAMSGA 92
+ AS AA AAA S A
Sbjct: 82 ------SSSASAAAAAAAASSSA 98
Score = 33.5 bits (75), Expect = 0.16
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 20/101 (19%)
Query: 12 GHNSGVAMQRAAREGAGAWEPA----------PPSPVLRPQAHPQRSREGPSAARPGGAS 61
GH + ++ A GA + A PP P PQ HPQ+ + +
Sbjct: 12 GHGAASPSEKGAHPSGGADDVAKKPPPAPQQPPPPPAPHPQQHPQQHPQNQA-------- 63
Query: 62 GLHEEGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLR 102
H +G R G ++S ++ +AA + A ++ SC R
Sbjct: 64 --HGKGGHRGGGGGGGKSSSSSSASAAAAAAAASSSASCSR 102
>gi|153285461 fibroblast growth factor 2 [Homo sapiens]
Length = 288
Score = 35.4 bits (80), Expect = 0.042
Identities = 36/104 (34%), Positives = 43/104 (41%), Gaps = 32/104 (30%)
Query: 26 GAGAWEPAPPSPVLRPQAHP----------------QRSREGPSAAR----------PGG 59
GA AWE A P RP+ HP +R+ E PS +R PGG
Sbjct: 34 GAAAWEAALPRR--RPRRHPSVNPRSRAAGSPRTRGRRTEERPSGSRLGDRGRGRALPGG 91
Query: 60 ASGLHEEGRV--RCGCRPDAR--ASPLAAPAAAMSGAGLAAVVS 99
G GR R G R R A+P AAPAA S G A ++
Sbjct: 92 RLGGRGRGRAPERVGGRGRGRGTAAPRAAPAARGSRPGPAGTMA 135
>gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 34.7 bits (78), Expect = 0.071
Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 19/120 (15%)
Query: 6 QASLQLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSREGPSAARPGGASGLHE 65
+A L +G +SG ++ G G P L HPQ+ GP PGG
Sbjct: 103 EAPLTVGRDSG--LEAGVGVGCGLRTAQPAGFELLAWQHPQKPPGGPQRPSPGGLR---- 156
Query: 66 EGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGEEPQTHEIFGFLVWTMVAA 125
G R + +SP P ++ +GL C P P H G +WT A
Sbjct: 157 ------GPRSLSGSSPWRGPQGSLCKSGLC----CAHP---VRPAGHVACGAGIWTRAQA 203
>gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 34.7 bits (78), Expect = 0.071
Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 19/120 (15%)
Query: 6 QASLQLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSREGPSAARPGGASGLHE 65
+A L +G +SG ++ G G P L HPQ+ GP PGG
Sbjct: 103 EAPLTVGRDSG--LEAGVGVGCGLRTAQPAGFELLAWQHPQKPPGGPQRPSPGGLR---- 156
Query: 66 EGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGEEPQTHEIFGFLVWTMVAA 125
G R + +SP P ++ +GL C P P H G +WT A
Sbjct: 157 ------GPRSLSGSSPWRGPQGSLCKSGLC----CAHP---VRPAGHVACGAGIWTRAQA 203
>gi|61966741 TMF regulated nuclear protein [Homo sapiens]
Length = 227
Score = 34.7 bits (78), Expect = 0.071
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 12 GHNSGVAMQRAA---REGAGAWEPAPPSPVLRPQAHPQRSREGPSAARPGGASGLHEEGR 68
G G A QR+ R+ + +P PP+P L P P +S P AA G ++G E+
Sbjct: 12 GAQEGTAEQRSPPPPRDPMPSSQPPPPTPTLTPTPTPGQSPPLPDAA--GASAGAAEDQE 69
Query: 69 VRCGCRPDARASPLAAPAAAMSGAGLAA 96
++ R AS +A A G+G AA
Sbjct: 70 LQ---RWRQGASGIAGLAGPGGGSGAAA 94
>gi|58218966 hypothetical protein LOC339201 [Homo sapiens]
Length = 193
Score = 34.7 bits (78), Expect = 0.071
Identities = 27/80 (33%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 32 PAPPSPVLRPQAH--PQRSREGPSAARPGGASGLHEEGRVRCGCRPDARASPLAAPAAAM 89
PA SP H PQR +AARPG S H+ CG L P A
Sbjct: 36 PAAHSPWACGPPHWGPQRGPRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGA 95
Query: 90 SGAGLAAVVSCLRPQPGEEP 109
G+A S L P+P P
Sbjct: 96 PQPGVAC--SYLGPRPQRTP 113
>gi|5031805 insulin receptor substrate 1 [Homo sapiens]
Length = 1242
Score = 34.3 bits (77), Expect = 0.092
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 16 GVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSREGPSAARPGGASGLHEEGRVRCGCRP 75
GVA + R+G+G + P P V PQ R P P G + G GC P
Sbjct: 618 GVAPVPSGRKGSGDYMPMSPKSVSAPQQIINPIRRHPQRVDPNGYMMMSPSG----GCSP 673
Query: 76 DARASPLAAPAAA 88
D P ++ +++
Sbjct: 674 DIGGGPSSSSSSS 686
>gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 34.3 bits (77), Expect = 0.092
Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 19/120 (15%)
Query: 6 QASLQLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSREGPSAARPGGASGLHE 65
+A L +G +SG ++ G G P L HPQ+ GP PGG
Sbjct: 103 EAPLTVGRDSG--LEAGVGVGCGLRTAQPAGFELLAWQHPQKPPGGPQRPSPGGLR---- 156
Query: 66 EGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGEEPQTHEIFGFLVWTMVAA 125
G R + +SP P ++ +GL C P P H G +WT A
Sbjct: 157 ------GPRSLSGSSPWRGPQGSLCKSGLC----CAHP---VRPAGHLACGAGIWTRAQA 203
>gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 451
Score = 33.9 bits (76), Expect = 0.12
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 19 MQRAAREGAGAWEPAPPSPVLRPQAHPQRSREGPSAARPGGASGLHEEGRVRCGC----- 73
++ + GAG P P HP+ +R+ + RP SG HE+G V+
Sbjct: 95 LEEERKAGAGLSPTQRCGPRAIPGVHPRPARQEEAQRRPAPRSGSHEQGAVQARAAGRQQ 154
Query: 74 ----RPDARASPLAAPAAA 88
+P AR P+ AA
Sbjct: 155 LQHRQPPARGRPVRRRPAA 173
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.136 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,377,836
Number of Sequences: 37866
Number of extensions: 482533
Number of successful extensions: 4486
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 4231
Number of HSP's gapped (non-prelim): 449
length of query: 231
length of database: 18,247,518
effective HSP length: 99
effective length of query: 132
effective length of database: 14,498,784
effective search space: 1913839488
effective search space used: 1913839488
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.