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Search of human proteins with 239741616
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741616 PREDICTED: hypothetical protein XP_002342249 [Homo
sapiens]
(197 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753176 PREDICTED: similar to zinc finger protein 607 [Homo... 394 e-110
gi|239747750 PREDICTED: hypothetical protein XP_002348259 [Homo ... 394 e-110
gi|239741616 PREDICTED: hypothetical protein XP_002342249 [Homo ... 394 e-110
gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo ... 201 4e-52
gi|47271464 zinc finger protein 607 [Homo sapiens] 63 1e-10
gi|22749241 zinc finger protein 540 [Homo sapiens] 49 2e-06
gi|59850751 zinc finger protein 302 [Homo sapiens] 49 2e-06
gi|59850649 zinc finger protein 302 [Homo sapiens] 49 2e-06
gi|28274686 zinc finger protein 82 homolog [Homo sapiens] 49 3e-06
gi|21389599 zinc finger protein 570 [Homo sapiens] 48 5e-06
gi|239751742 PREDICTED: similar to zinc finger protein 181 [Homo... 48 6e-06
gi|55741876 zinc finger protein 484 isoform a [Homo sapiens] 48 6e-06
gi|46371195 gonadotropin inducible transcription repressor 1 [Ho... 48 6e-06
gi|226958478 zinc finger protein 727 [Homo sapiens] 47 8e-06
gi|22095393 zinc finger protein 420 [Homo sapiens] 47 8e-06
gi|239508879 PREDICTED: similar to zinc finger protein 208 [Homo... 47 8e-06
gi|239746243 PREDICTED: similar to zinc finger protein 181 [Homo... 47 1e-05
gi|224586807 zinc finger protein 181 isoform 2 [Homo sapiens] 47 1e-05
gi|89001105 zinc finger protein 571 [Homo sapiens] 47 1e-05
gi|55769561 zinc finger protein 21 isoform 2 [Homo sapiens] 47 1e-05
gi|55769559 zinc finger protein 21 isoform 1 [Homo sapiens] 47 1e-05
gi|155722996 zinc finger protein 544 [Homo sapiens] 47 1e-05
gi|55741659 zinc finger protein 14-like [Homo sapiens] 47 1e-05
gi|148727251 zinc finger protein 81 [Homo sapiens] 47 1e-05
gi|31377839 zinc finger protein 606 [Homo sapiens] 47 1e-05
gi|224549033 zinc finger protein 529 isoform b [Homo sapiens] 46 2e-05
gi|224549030 zinc finger protein 529 isoform a [Homo sapiens] 46 2e-05
gi|224549028 zinc finger protein 529 isoform a [Homo sapiens] 46 2e-05
gi|212549576 zinc finger protein LOC654254 [Homo sapiens] 46 2e-05
gi|209870092 hypothetical protein LOC345462 [Homo sapiens] 46 2e-05
>gi|239753176 PREDICTED: similar to zinc finger protein 607 [Homo
sapiens]
Length = 197
Score = 394 bits (1011), Expect = e-110
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL
Sbjct: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
Query: 61 LLILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGW 120
LLILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGW
Sbjct: 61 LLILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGW 120
Query: 121 SWLAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRT 180
SWLAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRT
Sbjct: 121 SWLAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRT 180
Query: 181 PQSPSSSPPAASGRAAL 197
PQSPSSSPPAASGRAAL
Sbjct: 181 PQSPSSSPPAASGRAAL 197
>gi|239747750 PREDICTED: hypothetical protein XP_002348259 [Homo
sapiens]
Length = 197
Score = 394 bits (1011), Expect = e-110
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL
Sbjct: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
Query: 61 LLILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGW 120
LLILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGW
Sbjct: 61 LLILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGW 120
Query: 121 SWLAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRT 180
SWLAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRT
Sbjct: 121 SWLAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRT 180
Query: 181 PQSPSSSPPAASGRAAL 197
PQSPSSSPPAASGRAAL
Sbjct: 181 PQSPSSSPPAASGRAAL 197
>gi|239741616 PREDICTED: hypothetical protein XP_002342249 [Homo
sapiens]
Length = 197
Score = 394 bits (1011), Expect = e-110
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL
Sbjct: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
Query: 61 LLILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGW 120
LLILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGW
Sbjct: 61 LLILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGW 120
Query: 121 SWLAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRT 180
SWLAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRT
Sbjct: 121 SWLAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRT 180
Query: 181 PQSPSSSPPAASGRAAL 197
PQSPSSSPPAASGRAAL
Sbjct: 181 PQSPSSSPPAASGRAAL 197
>gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo
sapiens]
Length = 159
Score = 201 bits (510), Expect = 4e-52
Identities = 104/128 (81%), Positives = 111/128 (86%)
Query: 63 ILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGWSW 122
+L+ +RVRVTVA GPAAPLALV AR VTE+VARRIVSSVRPPGRAP PGTL LLGKG
Sbjct: 1 MLLPVRVRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPR 60
Query: 123 LAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRTPQ 182
LAQHPAA+RSHGSRLP TSGSPE+GVS HG AAAASLPRAQVPTPPPSHAQPQPLQRT
Sbjct: 61 LAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLP 120
Query: 183 SPSSSPPA 190
P+S P A
Sbjct: 121 PPTSLPAA 128
>gi|47271464 zinc finger protein 607 [Homo sapiens]
Length = 696
Score = 63.2 bits (152), Expect = 1e-10
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
MA +TF D+A DFSHQEWEYL LVQKTLYQEV ++N+D L + V +P L+ L
Sbjct: 1 MAYGSITFGDVAIDFSHQEWEYLSLVQKTLYQEVMMENYDNLVS-LAGHSVSKPDLITLL 59
>gi|22749241 zinc finger protein 540 [Homo sapiens]
Length = 660
Score = 49.3 bits (116), Expect = 2e-06
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLV 58
MA VTFRD+A DFS +EWE LD Q+ LY++V ++N++ L + S + + L+
Sbjct: 1 MAHALVTFRDVAIDFSQKEWECLDTTQRKLYRDVMLENYNNLVSLGYSGSKPDVITLL 58
>gi|59850751 zinc finger protein 302 [Homo sapiens]
Length = 399
Score = 49.3 bits (116), Expect = 2e-06
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 6 VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
VTF D+A DFSH+EW LD Q+ LY++V V+N++ L + LS V +P +++ L
Sbjct: 4 VTFSDVAIDFSHEEWACLDSAQRDLYKDVMVQNYENLVSVGLS--VTKPYVIMLL 56
>gi|59850649 zinc finger protein 302 [Homo sapiens]
Length = 399
Score = 49.3 bits (116), Expect = 2e-06
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 6 VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
VTF D+A DFSH+EW LD Q+ LY++V V+N++ L + LS V +P +++ L
Sbjct: 4 VTFSDVAIDFSHEEWACLDSAQRDLYKDVMVQNYENLVSVGLS--VTKPYVIMLL 56
>gi|28274686 zinc finger protein 82 homolog [Homo sapiens]
Length = 532
Score = 48.9 bits (115), Expect = 3e-06
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNF--FLSR 49
MA V F D++ DFS +EWEYLDL QK LY++V ++N+ L + F+S+
Sbjct: 1 MALRSVMFSDVSIDFSPEEWEYLDLEQKDLYRDVMLENYSNLVSLGCFISK 51
>gi|21389599 zinc finger protein 570 [Homo sapiens]
Length = 536
Score = 48.1 bits (113), Expect = 5e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 4 EFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLV 58
E VTFRD+A DFS +EW+ LD Q+ LY V ++N+ +L + L +LL+
Sbjct: 12 ELVTFRDVAVDFSQEEWDCLDSSQRHLYSNVMLENYRILVSLGLCFSKPSVILLL 66
>gi|239751742 PREDICTED: similar to zinc finger protein 181 [Homo
sapiens]
Length = 452
Score = 47.8 bits (112), Expect = 6e-06
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 4 EFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVL 42
E VTF D+A DFSH+EW LD Q+ LY++V V+N++ L
Sbjct: 17 ENVTFSDVAIDFSHEEWACLDSAQRDLYKDVMVQNYENL 55
>gi|55741876 zinc finger protein 484 isoform a [Homo sapiens]
Length = 852
Score = 47.8 bits (112), Expect = 6e-06
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 4 EFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEP 54
E V+F+D+ DFS EW+ LDL QK+LY+EV ++N+ FN +S G + P
Sbjct: 6 ESVSFKDVTVDFSRDEWQQLDLAQKSLYREVMLENY---FN-LISVGCQVP 52
>gi|46371195 gonadotropin inducible transcription repressor 1
[Homo sapiens]
Length = 563
Score = 47.8 bits (112), Expect = 6e-06
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
MA E V FRD+A D S +EWE L+ Q+ LY+EV ++N+ L + LS V +P ++ L
Sbjct: 1 MAHELVMFRDVAIDVSQEEWECLNPAQRNLYKEVMLENYSNLVSLGLS--VSKPAVISSL 58
>gi|226958478 zinc finger protein 727 [Homo sapiens]
Length = 499
Score = 47.4 bits (111), Expect = 8e-06
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 6 VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPLLLILV 65
+TFRD+A +FS +EWE LD Q+ LY++V ++N+ LF+ L+ + + +
Sbjct: 4 LTFRDVAVEFSPEEWECLDSAQQRLYRDVMLENYGNLFSLGLAIFKPDLITYLEQRKEPW 63
Query: 66 RLRVRVTVAEGPAAPLALVA 85
R + TVA+ PA L A
Sbjct: 64 NARRQKTVAKHPAGSLHFTA 83
>gi|22095393 zinc finger protein 420 [Homo sapiens]
Length = 688
Score = 47.4 bits (111), Expect = 8e-06
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFL 47
MA + V FRD+A DFS +EWE LD Q+ LY++V ++N+ L + L
Sbjct: 1 MARKLVMFRDVAIDFSQEEWECLDSAQRDLYRDVMLENYSNLVSLDL 47
>gi|239508879 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1102
Score = 47.4 bits (111), Expect = 8e-06
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 6 VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPLLLILV 65
+TFRD+A +FS +EWE LD Q+ LY++V ++N+ LF+ L+ + + +
Sbjct: 443 LTFRDVAVEFSPEEWECLDSAQQRLYRDVMLENYGNLFSLGLAIFKPDLITYLEQRKEPW 502
Query: 66 RLRVRVTVAEGPAAPLALVA 85
R + TVA+ PA L A
Sbjct: 503 NARRQKTVAKHPAGSLHFTA 522
Score = 41.6 bits (96), Expect = 4e-04
Identities = 16/34 (47%), Positives = 27/34 (79%)
Query: 6 VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNH 39
+TFRD+A +FS +EW+ LD Q+ LY++V ++N+
Sbjct: 59 LTFRDIAIEFSLEEWQCLDCAQQNLYRDVMLENY 92
>gi|239746243 PREDICTED: similar to zinc finger protein 181 [Homo
sapiens]
Length = 442
Score = 47.0 bits (110), Expect = 1e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 6 VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVL 42
VTF D+A DFSH+EW LD Q+ LY++V V+N++ L
Sbjct: 9 VTFSDVAIDFSHEEWACLDSAQRDLYKDVMVQNYENL 45
>gi|224586807 zinc finger protein 181 isoform 2 [Homo sapiens]
Length = 570
Score = 47.0 bits (110), Expect = 1e-05
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 6 VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
VTF D+A DF+H+EW +L Q+ LY++V V+N++ L + LS V +P ++ L
Sbjct: 4 VTFNDVAIDFTHEEWGWLSSAQRDLYKDVMVQNYENLVSVGLS--VTKPYVITLL 56
>gi|89001105 zinc finger protein 571 [Homo sapiens]
Length = 609
Score = 47.0 bits (110), Expect = 1e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 6 VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFL 47
VTFRD+A DFS +EWE LD Q+ LY++V ++N+ L + L
Sbjct: 6 VTFRDVAIDFSQEEWECLDPAQRDLYRDVMLENYSNLISLDL 47
>gi|55769561 zinc finger protein 21 isoform 2 [Homo sapiens]
Length = 620
Score = 47.0 bits (110), Expect = 1e-05
Identities = 22/55 (40%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 6 VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
VTF D+A DF+ +EW+YL+ Q+TLY++V ++ + L F+ + V +P L++ L
Sbjct: 8 VTFEDVAVDFTQEEWQYLNPPQRTLYRDVMLETYSNL--VFVGQQVTKPNLILKL 60
>gi|55769559 zinc finger protein 21 isoform 1 [Homo sapiens]
Length = 639
Score = 47.0 bits (110), Expect = 1e-05
Identities = 22/55 (40%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 6 VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPL 60
VTF D+A DF+ +EW+YL+ Q+TLY++V ++ + L F+ + V +P L++ L
Sbjct: 27 VTFEDVAVDFTQEEWQYLNPPQRTLYRDVMLETYSNL--VFVGQQVTKPNLILKL 79
>gi|155722996 zinc finger protein 544 [Homo sapiens]
Length = 715
Score = 47.0 bits (110), Expect = 1e-05
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 6 VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVK--NHDVLFNFFLSR 49
V F D+A F+ +EWE LDL Q+TLY+EVT++ H V FLS+
Sbjct: 14 VCFEDVAMAFTQEEWEQLDLAQRTLYREVTLETWEHIVSLGLFLSK 59
>gi|55741659 zinc finger protein 14-like [Homo sapiens]
Length = 533
Score = 47.0 bits (110), Expect = 1e-05
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 1 MACEFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNH 39
MA VTFRD+A DFS +EWE+LD Q+ LY++V +N+
Sbjct: 1 MAHGSVTFRDVAIDFSQEEWEFLDPAQRDLYRDVMWENY 39
>gi|148727251 zinc finger protein 81 [Homo sapiens]
Length = 661
Score = 46.6 bits (109), Expect = 1e-05
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 2 ACEF-VTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEP 54
ACE V+F D+ DFS +EW+ LD Q+ LYQ+V ++N ++ LS G E P
Sbjct: 16 ACEVSVSFEDVTVDFSREEWQQLDSTQRRLYQDVMLEN----YSHLLSVGFEVP 65
>gi|31377839 zinc finger protein 606 [Homo sapiens]
Length = 792
Score = 46.6 bits (109), Expect = 1e-05
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 4 EFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFN 44
E VTF+D+A DF+ +EW LDLVQ+TLY++V ++ + L +
Sbjct: 60 EPVTFKDVAVDFTQEEWGQLDLVQRTLYRDVMLETYGHLLS 100
>gi|224549033 zinc finger protein 529 isoform b [Homo sapiens]
Length = 545
Score = 46.2 bits (108), Expect = 2e-05
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 4 EFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFL 47
E VT RD+ +FS +EWEYLD Q+ LY +V ++N+ L + L
Sbjct: 19 ELVTLRDVVINFSQEEWEYLDSAQRNLYWDVMMENYSNLLSLDL 62
>gi|224549030 zinc finger protein 529 isoform a [Homo sapiens]
Length = 563
Score = 46.2 bits (108), Expect = 2e-05
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 4 EFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFL 47
E VT RD+ +FS +EWEYLD Q+ LY +V ++N+ L + L
Sbjct: 37 ELVTLRDVVINFSQEEWEYLDSAQRNLYWDVMMENYSNLLSLDL 80
>gi|224549028 zinc finger protein 529 isoform a [Homo sapiens]
Length = 563
Score = 46.2 bits (108), Expect = 2e-05
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 4 EFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFL 47
E VT RD+ +FS +EWEYLD Q+ LY +V ++N+ L + L
Sbjct: 37 ELVTLRDVVINFSQEEWEYLDSAQRNLYWDVMMENYSNLLSLDL 80
>gi|212549576 zinc finger protein LOC654254 [Homo sapiens]
Length = 585
Score = 46.2 bits (108), Expect = 2e-05
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 4 EFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVLFNFFLSRGVEEPLLLVPLLLI 63
E +TFRD+A +FS +EW+ LD Q+ LY++V ++N+ L + ++ + ++ +
Sbjct: 2 ELLTFRDVAIEFSPEEWKCLDPAQQNLYRDVMLENYRNLISLGVAISNPDLVIYLEQRKE 61
Query: 64 LVRLRVRVTVAEGPA 78
++++ TVA+ PA
Sbjct: 62 PYKVKIHETVAKHPA 76
>gi|209870092 hypothetical protein LOC345462 [Homo sapiens]
Length = 563
Score = 46.2 bits (108), Expect = 2e-05
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 4 EFVTFRDMATDFSHQEWEYLDLVQKTLYQEVTVKNHDVL 42
E VTFRD+A FS EW +LD Q+ LY+EV ++N+ +L
Sbjct: 12 ESVTFRDVAVFFSQDEWLHLDSAQRALYREVMLENYSIL 50
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,389,598
Number of Sequences: 37866
Number of extensions: 543063
Number of successful extensions: 9206
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 618
Number of HSP's that attempted gapping in prelim test: 6259
Number of HSP's gapped (non-prelim): 3187
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.