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Search of human proteins with 239741018
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741018 PREDICTED: hypothetical protein XP_002342056 [Homo
sapiens]
(566 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741018 PREDICTED: hypothetical protein XP_002342056 [Homo ... 1108 0.0
gi|169161714 PREDICTED: tetratricopeptide repeat domain 34 [Homo... 449 e-126
gi|169162130 PREDICTED: tetratricopeptide repeat domain 34 [Homo... 449 e-126
gi|87080813 LON peptidase N-terminal domain and ring finger 1 [H... 42 0.002
gi|21361356 translocase of outer mitochondrial membrane 34 [Homo... 41 0.003
gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens] 41 0.003
gi|27262638 sperm associated antigen 1 [Homo sapiens] 39 0.010
gi|27262636 sperm associated antigen 1 [Homo sapiens] 39 0.010
gi|54607135 translocase of outer mitochondrial membrane 70 homol... 39 0.013
gi|116534937 interferon-induced protein with tetratricopeptide r... 39 0.017
gi|225735595 RNA polymerase II associated protein 3 isoform 3 [H... 37 0.037
gi|225735593 RNA polymerase II associated protein 3 isoform 2 [H... 37 0.037
gi|225735591 RNA polymerase II associated protein 3 isoform 1 [H... 37 0.037
gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 35 0.14
gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 35 0.14
gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Hom... 35 0.14
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 35 0.18
gi|110225358 tetratricopeptide repeat domain 7A [Homo sapiens] 35 0.24
gi|208609985 SH2 domain containing 3A [Homo sapiens] 34 0.31
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens] 34 0.41
gi|6912630 interferon-induced protein with tetratricopeptide rep... 33 0.53
gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens] 33 0.70
gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens] 33 0.70
gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo s... 33 0.70
gi|110611917 tetratricopeptide repeat domain 14 isoform b [Homo ... 33 0.70
gi|21450645 tetratricopeptide repeat domain 16 [Homo sapiens] 33 0.70
gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 33 0.91
gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sap... 32 1.2
gi|221316695 multimerin 2 precursor [Homo sapiens] 32 1.2
gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo ... 32 1.2
>gi|239741018 PREDICTED: hypothetical protein XP_002342056 [Homo
sapiens]
Length = 566
Score = 1108 bits (2865), Expect = 0.0
Identities = 566/566 (100%), Positives = 566/566 (100%)
Query: 1 MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL 60
MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL
Sbjct: 1 MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL 60
Query: 61 YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ 120
YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ
Sbjct: 61 YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ 120
Query: 121 PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES 180
PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES
Sbjct: 121 PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES 180
Query: 181 LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALK 240
LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALK
Sbjct: 181 LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALK 240
Query: 241 LGPGTVVPELRSLKPEAQALITQGLYSHCRALLSQLPDTGAPLEDKDTQGLLAVGEALIK 300
LGPGTVVPELRSLKPEAQALITQGLYSHCRALLSQLPDTGAPLEDKDTQGLLAVGEALIK
Sbjct: 241 LGPGTVVPELRSLKPEAQALITQGLYSHCRALLSQLPDTGAPLEDKDTQGLLAVGEALIK 300
Query: 301 IDSGQPHWHLLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAA 360
IDSGQPHWHLLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAA
Sbjct: 301 IDSGQPHWHLLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAA 360
Query: 361 RDLQSLAEVDAPDLSCLLHLLEASERQSLAQAAAQEAGTLLDAGQPRQALGYCSLSVLAS 420
RDLQSLAEVDAPDLSCLLHLLEASERQSLAQAAAQEAGTLLDAGQPRQALGYCSLSVLAS
Sbjct: 361 RDLQSLAEVDAPDLSCLLHLLEASERQSLAQAAAQEAGTLLDAGQPRQALGYCSLSVLAS 420
Query: 421 GSSACHLRLRATCLAELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDE 480
GSSACHLRLRATCLAELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDE
Sbjct: 421 GSSACHLRLRATCLAELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDE 480
Query: 481 AAAAGAFAQALKLAPSLAQNSLCRQPGRAPTARMFLLRGQCCLEEQRHAEAWTAVESGLL 540
AAAAGAFAQALKLAPSLAQNSLCRQPGRAPTARMFLLRGQCCLEEQRHAEAWTAVESGLL
Sbjct: 481 AAAAGAFAQALKLAPSLAQNSLCRQPGRAPTARMFLLRGQCCLEEQRHAEAWTAVESGLL 540
Query: 541 VDPDHRGLKRLKARIRREASSGCWLQ 566
VDPDHRGLKRLKARIRREASSGCWLQ
Sbjct: 541 VDPDHRGLKRLKARIRREASSGCWLQ 566
>gi|169161714 PREDICTED: tetratricopeptide repeat domain 34 [Homo
sapiens]
Length = 747
Score = 449 bits (1155), Expect = e-126
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL 60
MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL
Sbjct: 514 MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL 573
Query: 61 YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ 120
YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ
Sbjct: 574 YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ 633
Query: 121 PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES 180
PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES
Sbjct: 634 PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES 693
Query: 181 LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ 229
LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ
Sbjct: 694 LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ 742
Score = 84.7 bits (208), Expect = 2e-16
Identities = 145/552 (26%), Positives = 208/552 (37%), Gaps = 118/552 (21%)
Query: 2 LQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADALY 61
L P AG S Q ETGG LL LD S L+ +AL
Sbjct: 195 LSGHPEAGHSAGQ-----QETGGQR--------------LLAALDPRGTRSDTLSPEALL 235
Query: 62 RLGRLEETHKALLVALSRRPQAA-PVLARLALLQLRRG---FFYDANQL-----VKKLVQ 112
GR E+ A AL P + P R A L + R FF D +++ +
Sbjct: 236 HSGRFEDCLAACSRALEAHPTGSEPQGERRAALLVTRAASAFFLDGRAQDVFWNLQEAFR 295
Query: 113 SGDTACLQPTLDVFCHEDRQLLQGHCH--------------------------------A 140
+ + VF +D++ ++
Sbjct: 296 ESPSGARRQFQAVFSVQDQERVRAQAQEAADVGFARFQEAVRNHPELREDAGRELLAPVT 355
Query: 141 RALAIL-RARPGGADGRVHTKEAIAYLSLAIFAAGSQAS-ESLLARAR------------ 186
RAL +L R P GA + + A L LA AAG++A E LL AR
Sbjct: 356 RALRVLLRLAPAGARPALGARLAECLL-LAGDAAGARAMCERLLRPARPEDPAGDRAGDR 414
Query: 187 ---------CYGFLGQKKTAMFDFNTVLRA---EPGN-VQALCGRALVHLALDQLQEAVD 233
C G + AM DF TV+ PG V+ALCGR L+ +
Sbjct: 415 APLLALRGFCALHAGDSRRAMEDFQTVVEQGAPHPGGCVRALCGRGLLRVLAGSAFLGTL 474
Query: 234 DIVSALKLGPGTVVPELRSLKPEAQ-ALITQGLYSHCRALLSQLP--------------D 278
D V+A +L P + ++ P Q L+ L R +L + P +
Sbjct: 475 DYVTACRLRPEEALLAAKAYVPWNQRGLLLVVLREEARGMLQRSPRAGPSRAQGRREAAE 534
Query: 279 TGAPLEDKDTQ-GLLAVGEALIKIDSGQPHWHLLLADILMAQGSYEEAGTHLEKALHRAP 337
TG P + G+ + L+++DS LL AD L G EE L AL R P
Sbjct: 535 TGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADALYRLGRLEETHKALLVALSRRP 594
Query: 338 TSEAARARLGLLQLKKGDVPGAARDLQSLAEVDAPDLSCLLHLLEA---SERQSLAQAAA 394
+ ARL LLQL++G A + ++ L V + D +CL L+ +RQ L
Sbjct: 595 QAAPVLARLALLQLRRGFFYDANQLVKKL--VQSGDTACLQPTLDVFCHEDRQLLQGHCH 652
Query: 395 QEAGTLLDAG--------QPRQALGYCSLSVLASGSSACH-LRLRATCLAELQEFGRALR 445
A +L A ++A+ Y SL++ A+GS A L RA C L + A+
Sbjct: 653 ARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMF 712
Query: 446 DLDHVLQEALGD 457
D + VL+ G+
Sbjct: 713 DFNTVLRAEPGN 724
>gi|169162130 PREDICTED: tetratricopeptide repeat domain 34 [Homo
sapiens]
Length = 901
Score = 449 bits (1155), Expect = e-126
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL 60
MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL
Sbjct: 668 MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL 727
Query: 61 YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ 120
YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ
Sbjct: 728 YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ 787
Query: 121 PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES 180
PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES
Sbjct: 788 PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES 847
Query: 181 LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ 229
LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ
Sbjct: 848 LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ 896
Score = 84.7 bits (208), Expect = 2e-16
Identities = 145/552 (26%), Positives = 208/552 (37%), Gaps = 118/552 (21%)
Query: 2 LQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADALY 61
L P AG S Q ETGG LL LD S L+ +AL
Sbjct: 349 LSGHPEAGHSAGQ-----QETGGQR--------------LLAALDPRGTRSDTLSPEALL 389
Query: 62 RLGRLEETHKALLVALSRRPQAA-PVLARLALLQLRRG---FFYDANQL-----VKKLVQ 112
GR E+ A AL P + P R A L + R FF D +++ +
Sbjct: 390 HSGRFEDCLAACSRALEAHPTGSEPQGERRAALLVTRAASAFFLDGRAQDVFWNLQEAFR 449
Query: 113 SGDTACLQPTLDVFCHEDRQLLQGHCH--------------------------------A 140
+ + VF +D++ ++
Sbjct: 450 ESPSGARRQFQAVFSVQDQERVRAQAQEAADVGFARFQEAVRNHPELREDAGRELLAPVT 509
Query: 141 RALAIL-RARPGGADGRVHTKEAIAYLSLAIFAAGSQAS-ESLLARAR------------ 186
RAL +L R P GA + + A L LA AAG++A E LL AR
Sbjct: 510 RALRVLLRLAPAGARPALGARLAECLL-LAGDAAGARAMCERLLRPARPEDPAGDRAGDR 568
Query: 187 ---------CYGFLGQKKTAMFDFNTVLRA---EPGN-VQALCGRALVHLALDQLQEAVD 233
C G + AM DF TV+ PG V+ALCGR L+ +
Sbjct: 569 APLLALRGFCALHAGDSRRAMEDFQTVVEQGAPHPGGCVRALCGRGLLRVLAGSAFLGTL 628
Query: 234 DIVSALKLGPGTVVPELRSLKPEAQ-ALITQGLYSHCRALLSQLP--------------D 278
D V+A +L P + ++ P Q L+ L R +L + P +
Sbjct: 629 DYVTACRLRPEEALLAAKAYVPWNQRGLLLVVLREEARGMLQRSPRAGPSRAQGRREAAE 688
Query: 279 TGAPLEDKDTQ-GLLAVGEALIKIDSGQPHWHLLLADILMAQGSYEEAGTHLEKALHRAP 337
TG P + G+ + L+++DS LL AD L G EE L AL R P
Sbjct: 689 TGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADALYRLGRLEETHKALLVALSRRP 748
Query: 338 TSEAARARLGLLQLKKGDVPGAARDLQSLAEVDAPDLSCLLHLLEA---SERQSLAQAAA 394
+ ARL LLQL++G A + ++ L V + D +CL L+ +RQ L
Sbjct: 749 QAAPVLARLALLQLRRGFFYDANQLVKKL--VQSGDTACLQPTLDVFCHEDRQLLQGHCH 806
Query: 395 QEAGTLLDAG--------QPRQALGYCSLSVLASGSSACH-LRLRATCLAELQEFGRALR 445
A +L A ++A+ Y SL++ A+GS A L RA C L + A+
Sbjct: 807 ARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMF 866
Query: 446 DLDHVLQEALGD 457
D + VL+ G+
Sbjct: 867 DFNTVLRAEPGN 878
>gi|87080813 LON peptidase N-terminal domain and ring finger 1 [Homo
sapiens]
Length = 773
Score = 41.6 bits (96), Expect = 0.002
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 393 AAQEAGTLLDAGQPRQALGYCSLSVLASGSSACHLRLRATCLAELQEFGRALRDLDHVLQ 452
AA G LL G+ R+AL ++ A S RA A LQEF A+ DL+ VL
Sbjct: 214 AAGRLGELLHQGRYREALAAACEALRAEPSDLIVKIYRAESYAGLQEFKAAIEDLNAVLF 273
Query: 453 EALGDGDLPRRAEDFCRQGRLLLSLGDEAAAAGAFAQALKLAPSLAQNSL 502
+ LP E + R+G++L G A F Q L L A L
Sbjct: 274 Q------LPDWPEVYFRKGKVLCDAGFLGDALQLFLQCLALDEDFAPAKL 317
>gi|21361356 translocase of outer mitochondrial membrane 34 [Homo
sapiens]
Length = 309
Score = 41.2 bits (95), Expect = 0.003
Identities = 63/281 (22%), Positives = 111/281 (39%), Gaps = 48/281 (17%)
Query: 218 RALVHLALDQLQEAVDDIVSALKLGPGTVVPELRSLKPEAQALITQGLYSHCRALLSQLP 277
RA HL ++ + D SAL L P ++ P LR +A + L + A +
Sbjct: 57 RAACHLKDGNCRDCIKDCTSALALVPFSIKPLLR------RASAYEALEKYPMAYVDY-- 108
Query: 278 DTGAPLEDKDT---QGLLAVGEALIKIDSGQPHWHLLLADILMAQGSYEEAGTHLEKALH 334
T ++D T +G+ + AL +DS P W L L I + S ++ L H
Sbjct: 109 KTVLQIDDNVTSAVEGINRMTRAL--MDSLGPEWRLKLPSIPLVPVSAQKRWNSLPSENH 166
Query: 335 RAPTSEAARARLGLLQLKKGDVPGAARDLQSLAEVDAPDLSCLLHLLEASERQSLAQAAA 394
+ E A+++ K VP A D++ A+
Sbjct: 167 K----EMAKSKSKETTATKNRVPSAG-DVEK------------------------ARVLK 197
Query: 395 QEAGTLLDAGQPRQALGYCSLSVLASGSSACHLRLRATCLAELQEFGRALRDLDHVLQEA 454
+E L+ G ++A+ S S+L S + RA C L+++ A++D L+
Sbjct: 198 EEGNELVKKGNHKKAIEKYSESLLCSNLESATYSNRALCYLVLKQYTEAVKDCTEALKL- 256
Query: 455 LGDGDLPRRAEDFCRQGRLLLSLGDEAAAAGAFAQALKLAP 495
DG + + F R+ + +L D ++ + L++ P
Sbjct: 257 --DG---KNVKAFYRRAQAHKALKDYKSSFADISNLLQIEP 292
Score = 35.4 bits (80), Expect = 0.14
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 160 KEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRA 219
K+AI S ++ + + S + RA CY L Q A+ D L+ + NV+A RA
Sbjct: 210 KKAIEKYSESLLCSNLE-SATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRA 268
Query: 220 LVHLALDQLQEAVDDIVSALKLGP 243
H AL + + DI + L++ P
Sbjct: 269 QAHKALKDYKSSFADISNLLQIEP 292
>gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens]
Length = 349
Score = 40.8 bits (94), Expect = 0.003
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 8/136 (5%)
Query: 130 DRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLAR-ARCY 188
+++ L AR + RA G +G L L + G L A A C
Sbjct: 205 EKEALAREERARGTELFRA--GNPEGAARCYGRALRLLLTLPPPGPPERTVLHANLAACQ 262
Query: 189 GFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGPGTVVP 248
LGQ + A + VL EPG+++AL R + AL L++A D+ L + P
Sbjct: 263 LLLGQPQLAAQSCDRVLEREPGHLKALYRRGVAQAALGNLEKATADLKKVL-----AIDP 317
Query: 249 ELRSLKPEAQALITQG 264
+ R+ + E ++ QG
Sbjct: 318 KNRAAQEELGKVVIQG 333
>gi|27262638 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 39.3 bits (90), Expect = 0.010
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 160 KEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRA 219
+EA+ Y + +I A + + + A+A L +A D VL EPGNV+AL RA
Sbjct: 226 EEAVMYYTRSISALPTVVAYNNRAQAEIK--LQNWNSAFQDCEKVLELEPGNVKALLRRA 283
Query: 220 LVHLALDQLQEAVDDIVSALKLGP 243
+ ++L+EA +D+ L + P
Sbjct: 284 TTYKHQNKLREATEDLSKVLDVEP 307
Score = 37.4 bits (85), Expect = 0.037
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 184 RARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGP 243
RA CY L Q + A D + L+ GNV+A RAL H L Q+++ D+ + L P
Sbjct: 663 RALCYLKLCQFEEAKQDCDQALQLADGNVKAFYRRALAHKGLKNYQKSLIDLNKVILLDP 722
Query: 244 GTV 246
+
Sbjct: 723 SII 725
Score = 30.8 bits (68), Expect = 3.5
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 173 AGSQASESLLA----RARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQL 228
AGS+ ++ L RA CY G + D N L P +++ L RA+ + L+Q
Sbjct: 478 AGSEIADDLSILYSNRAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMAYETLEQY 537
Query: 229 QEAVDDIVSALKLGPG 244
+A D + L++ G
Sbjct: 538 GKAYVDYKTVLQIDCG 553
Score = 30.0 bits (66), Expect = 5.9
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 195 KTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGPGTVVPELRSLK 254
K A+ ++ L+ RAL +L L Q +EA D AL+L G V R
Sbjct: 640 KDALSKYSECLKINNKECAIYTNRALCYLKLCQFEEAKQDCDQALQLADGNVKAFYR--- 696
Query: 255 PEAQALITQGLYSHCRALL 273
+AL +GL ++ ++L+
Sbjct: 697 ---RALAHKGLKNYQKSLI 712
>gi|27262636 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 39.3 bits (90), Expect = 0.010
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 160 KEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRA 219
+EA+ Y + +I A + + + A+A L +A D VL EPGNV+AL RA
Sbjct: 226 EEAVMYYTRSISALPTVVAYNNRAQAEIK--LQNWNSAFQDCEKVLELEPGNVKALLRRA 283
Query: 220 LVHLALDQLQEAVDDIVSALKLGP 243
+ ++L+EA +D+ L + P
Sbjct: 284 TTYKHQNKLREATEDLSKVLDVEP 307
Score = 37.4 bits (85), Expect = 0.037
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 184 RARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGP 243
RA CY L Q + A D + L+ GNV+A RAL H L Q+++ D+ + L P
Sbjct: 663 RALCYLKLCQFEEAKQDCDQALQLADGNVKAFYRRALAHKGLKNYQKSLIDLNKVILLDP 722
Query: 244 GTV 246
+
Sbjct: 723 SII 725
Score = 30.8 bits (68), Expect = 3.5
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 173 AGSQASESLLA----RARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQL 228
AGS+ ++ L RA CY G + D N L P +++ L RA+ + L+Q
Sbjct: 478 AGSEIADDLSILYSNRAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMAYETLEQY 537
Query: 229 QEAVDDIVSALKLGPG 244
+A D + L++ G
Sbjct: 538 GKAYVDYKTVLQIDCG 553
Score = 30.0 bits (66), Expect = 5.9
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 195 KTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGPGTVVPELRSLK 254
K A+ ++ L+ RAL +L L Q +EA D AL+L G V R
Sbjct: 640 KDALSKYSECLKINNKECAIYTNRALCYLKLCQFEEAKQDCDQALQLADGNVKAFYR--- 696
Query: 255 PEAQALITQGLYSHCRALL 273
+AL +GL ++ ++L+
Sbjct: 697 ---RALAHKGLKNYQKSLI 712
>gi|54607135 translocase of outer mitochondrial membrane 70 homolog
A [Homo sapiens]
Length = 608
Score = 38.9 bits (89), Expect = 0.013
Identities = 48/194 (24%), Positives = 73/194 (37%), Gaps = 20/194 (10%)
Query: 178 SESLLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVS 237
+ +L+ R Y Q + DFN +P N R + + LDQ++EAV D
Sbjct: 367 ANALIKRGSMYMQQQQPLLSTQDFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDE 426
Query: 238 ALKLGPGTVVPELRSLKPEAQALITQGLYSHCRALLSQLPDTGAPLEDKDTQGLLAVGEA 297
++L P + + AQA C AL Q TG Q + E
Sbjct: 427 CIRLRPESAL---------AQA-------QKCFALYRQ-AYTGN--NSSQIQAAMKGFEE 467
Query: 298 LIKIDSGQPHWHLLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLK-KGDV 356
+IK + L A L Q + +A +K + P + GLLQL+ K D+
Sbjct: 468 VIKKFPRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDL 527
Query: 357 PGAARDLQSLAEVD 370
+ E+D
Sbjct: 528 DRGLELISKAIEID 541
>gi|116534937 interferon-induced protein with tetratricopeptide
repeats 1 isoform 2 [Homo sapiens]
Length = 478
Score = 38.5 bits (88), Expect = 0.017
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 201 FNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGPGTVVPELRSLKPEAQAL 260
F VL +P N ++ G A+ LD KL P SL P QA+
Sbjct: 164 FEKVLEVDPENPESSAGYAISAYRLD-----------GFKLATKNHKPF--SLLPLRQAV 210
Query: 261 ITQGLYSHCRALLS-QLPDTGAPLEDKDTQGLLAVGEALIKIDSGQPHWHLLLADILMAQ 319
+ + LL+ +L D G ++ +G + EAL + S Q + A +
Sbjct: 211 RLNPDNGYIKVLLALKLQDEG-----QEAEGEKYIEEALANMSS-QTYVFRYAAKFYRRK 264
Query: 320 GSYEEAGTHLEKALHRAPTSEAARARLGL------LQLKKGDVPGAARDLQSLAEVDAPD 373
GS ++A L+KAL PTS ++GL +Q+K+ G R Q+ ++D
Sbjct: 265 GSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQIKEA-TKGQPRG-QNREKLDKMI 322
Query: 374 LSCLLHLLEASERQSLAQAAAQE-AGTLLDAGQPRQA 409
S + H A E++ + A + A ++AG R+A
Sbjct: 323 RSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKA 359
>gi|225735595 RNA polymerase II associated protein 3 isoform 3 [Homo
sapiens]
Length = 506
Score = 37.4 bits (85), Expect = 0.037
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 18/90 (20%)
Query: 138 CHARALAILRARPGGADGRVHTKEAIAYLSL------------AIFAAGSQASESLLARA 185
C+ R +A GA+ + A+AYL + AI GS S++ R
Sbjct: 145 CYTRGIAA-----DGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSY-SKAFARRG 198
Query: 186 RCYGFLGQKKTAMFDFNTVLRAEPGNVQAL 215
FLG+ A DF TVL EPGN QA+
Sbjct: 199 TARTFLGKLNEAKQDFETVLLLEPGNKQAV 228
>gi|225735593 RNA polymerase II associated protein 3 isoform 2 [Homo
sapiens]
Length = 631
Score = 37.4 bits (85), Expect = 0.037
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 18/90 (20%)
Query: 138 CHARALAILRARPGGADGRVHTKEAIAYLSL------------AIFAAGSQASESLLARA 185
C+ R +A GA+ + A+AYL + AI GS S++ R
Sbjct: 304 CYTRGIAA-----DGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSY-SKAFARRG 357
Query: 186 RCYGFLGQKKTAMFDFNTVLRAEPGNVQAL 215
FLG+ A DF TVL EPGN QA+
Sbjct: 358 TARTFLGKLNEAKQDFETVLLLEPGNKQAV 387
>gi|225735591 RNA polymerase II associated protein 3 isoform 1 [Homo
sapiens]
Length = 665
Score = 37.4 bits (85), Expect = 0.037
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 18/90 (20%)
Query: 138 CHARALAILRARPGGADGRVHTKEAIAYLSL------------AIFAAGSQASESLLARA 185
C+ R +A GA+ + A+AYL + AI GS S++ R
Sbjct: 304 CYTRGIAA-----DGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSY-SKAFARRG 357
Query: 186 RCYGFLGQKKTAMFDFNTVLRAEPGNVQAL 215
FLG+ A DF TVL EPGN QA+
Sbjct: 358 TARTFLGKLNEAKQDFETVLLLEPGNKQAV 387
>gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 35.4 bits (80), Expect = 0.14
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 184 RARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDI 235
R Y LG+ ++AM D V+ EP + A R L++L D++ EA+DD+
Sbjct: 923 RGAIYRKLGKLQSAMNDLQRVILLEPLFLNAYWHRHLIYLFQDKINEALDDL 974
>gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 35.4 bits (80), Expect = 0.14
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 184 RARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDI 235
R Y LG+ ++AM D V+ EP + A R L++L D++ EA+DD+
Sbjct: 923 RGAIYRKLGKLQSAMNDLQRVILLEPLFLNAYWHRHLIYLFQDKINEALDDL 974
>gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Homo
sapiens]
Length = 1614
Score = 35.4 bits (80), Expect = 0.14
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 184 RARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDI 235
R Y LG+ ++AM D V+ EP + A R L++L D++ EA+DD+
Sbjct: 923 RGAIYRKLGKLQSAMNDLQRVILLEPLFLNAYWHRHLIYLFQDKINEALDDL 974
>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
[Homo sapiens]
Length = 494
Score = 35.0 bits (79), Expect = 0.18
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 16/142 (11%)
Query: 363 LQSLAEVDAPDLSCLLHLLEASERQSLAQAAAQEAGTLLDAGQPRQALGYCSLSVLASGS 422
+ + AE D + LL+ E + A+ ++ +A Y + ++
Sbjct: 1 MAAAAECDVVMAATEPELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPK 60
Query: 423 SACHLRLRATCLAELQEFGRALRDLDHVLQEALGDGDLPRRAED-----FCRQGRLLLSL 477
+A + RA L L F +EALGD R +D R+G+ LSL
Sbjct: 61 NASYYGNRAATLMMLGRF-----------REALGDAQQSVRLDDSFVRGHLREGKCHLSL 109
Query: 478 GDEAAAAGAFAQALKLAPSLAQ 499
G+ AA +F +AL+L AQ
Sbjct: 110 GNAMAACRSFQRALELDHKNAQ 131
Score = 32.7 bits (73), Expect = 0.91
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 182 LARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKL 241
+ +A C LG+ A + +LR + N AL R L D +++AV V AL++
Sbjct: 180 ILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRM 239
Query: 242 GP 243
P
Sbjct: 240 AP 241
>gi|110225358 tetratricopeptide repeat domain 7A [Homo sapiens]
Length = 858
Score = 34.7 bits (78), Expect = 0.24
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 19/133 (14%)
Query: 310 LLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAARDLQSLAEV 369
L A++ M Q +EAG +++A PTS + G L KG++ A+ L A
Sbjct: 715 LQAAELFMEQQHLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGNLE-EAKQLYKEALT 773
Query: 370 DAPDLSCLLH------------------LLEASERQSLAQAAAQEAGTLLDAGQPRQALG 411
PD ++H L +A ERQS A Q G +L A +A
Sbjct: 774 VNPDGVRIMHSLGLMLSRLGHKSLAQKVLRDAVERQSTCHEAWQGLGEVLQAQGQNEAAV 833
Query: 412 YCSLSVLASGSSA 424
C L+ L +S+
Sbjct: 834 DCFLTALELEASS 846
>gi|208609985 SH2 domain containing 3A [Homo sapiens]
Length = 576
Score = 34.3 bits (77), Expect = 0.31
Identities = 45/159 (28%), Positives = 59/159 (37%), Gaps = 13/159 (8%)
Query: 248 PELRSLKPEAQALITQGLYSH------CRALLSQLPDTGAPLEDKDTQGLLAVGEALIKI 301
P+ R L+P+ + H LL TG +D +G + V L +
Sbjct: 292 PQNRPLEPQVLHTLRGLFLEHHPGSTALHLLLVDCQATGLLGVTRDQRGNMGVSSGLELL 351
Query: 302 DSGQPHWHLLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAAR 361
PH H L ++L + AG L P E A A GL++L PGAA
Sbjct: 352 TL--PHGHHLRLELLERHQTLALAGA-LAVLGCSGPLEERAAALRGLVELALALRPGAAG 408
Query: 362 DLQSLAEVDA----PDLSCLLHLLEASERQSLAQAAAQE 396
DL LA V P +S L H R A A E
Sbjct: 409 DLPGLAAVMGALLMPQVSRLEHTWRQLRRSHTEAALAFE 447
>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
Length = 2481
Score = 33.9 bits (76), Expect = 0.41
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Query: 192 GQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGPGTVVPELR 251
G TA+ +N L +P N R+ ++ + Q +A+DD + A L P R
Sbjct: 72 GDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARLLNPKWPKAYFR 131
Query: 252 SLKPEAQALITQGLYSHCRALLSQLPDTGAPLEDKDTQGLLAVGEALIKI---DSGQPHW 308
Q + Q L H AL + +G + K Q L+ + EA +K DS +P +
Sbjct: 132 ------QGVALQYLGRHADALAAFA--SGLAQDPKSLQLLVGMVEAAMKSPMRDSLEPTY 183
Query: 309 HLL 311
L
Sbjct: 184 QQL 186
>gi|6912630 interferon-induced protein with tetratricopeptide
repeats 5 [Homo sapiens]
Length = 482
Score = 33.5 bits (75), Expect = 0.53
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 34/215 (15%)
Query: 201 FNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGPGTVVPELRSLKPEAQAL 260
F L EP N + G A+ LD + V + LGP + + +L P+
Sbjct: 163 FEKALEVEPDNPEFNIGYAITVYRLDDSDR--EGSVKSFSLGP---LRKAVTLNPDN--- 214
Query: 261 ITQGLYSHCRALLS-QLPDTGAPLEDKDTQGLLAVGEALIKIDSGQPHWHLLLADILMAQ 319
S+ + L+ +L D A + +G + E L +I S QP+ A +
Sbjct: 215 ------SYIKVFLALKLQDVHA-----EAEGEKYIEEILDQISS-QPYVLRYAAKFYRRK 262
Query: 320 GSYEEAGTHLEKALHRAPTSEAARARLGL------LQLKKG--DVPGAARDLQSLAEVDA 371
S+ +A L+KAL PTS ++GL +Q+KK + P L +VD
Sbjct: 263 NSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQIKKATHNRPKGKDKL----KVDE 318
Query: 372 PDLSCLLHLLEASERQSL-AQAAAQEAGTLLDAGQ 405
S + H A ER S+ A A A + GQ
Sbjct: 319 LISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQ 353
>gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens]
Length = 1036
Score = 33.1 bits (74), Expect = 0.70
Identities = 70/303 (23%), Positives = 106/303 (34%), Gaps = 58/303 (19%)
Query: 60 LYRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACL 119
L LGRLEE L A+ +P A + L + +G + A +K V L
Sbjct: 157 LKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT------L 210
Query: 120 QPT-LDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQAS 178
P LD + + L + RA+A AYL +
Sbjct: 211 DPNFLDAYINLGNVLKEARIFDRAVA-------------------AYLRALSLSPNHAVV 251
Query: 179 ESLLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSA 238
LA Y G A+ + + +P A C A + EA D +A
Sbjct: 252 HGNLACV--YYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 309
Query: 239 LKLGP--GTVVPELRSLKPEAQALITQGLYSHCRALLSQLPDTGAPLEDKDTQGLLAVGE 296
L+L P + L ++K E Q I + + + +AL P+ A
Sbjct: 310 LRLCPTHADSLNNLANIKRE-QGNIEEAVRLYRKAL-EVFPEFAAA-------------- 353
Query: 297 ALIKIDSGQPHWHLLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDV 356
H LA +L QG +EA H ++A+ +PT A + +G + DV
Sbjct: 354 ------------HSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDV 401
Query: 357 PGA 359
GA
Sbjct: 402 QGA 404
Score = 30.4 bits (67), Expect = 4.5
Identities = 44/194 (22%), Positives = 73/194 (37%), Gaps = 25/194 (12%)
Query: 305 QPHW---HLLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAAR 361
QPH+ + LA+ L +GS EA AL PT + L ++ ++G++ A R
Sbjct: 279 QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338
Query: 362 DLQSLAEVDAPDLSCLLHLLEASERQSLAQAAAQEAGTLLDAGQPRQALGYCSLSVLASG 421
+ EV A A + A L G+ ++AL + ++ S
Sbjct: 339 LYRKALEV----------------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISP 382
Query: 422 SSACHLRLRATCLAELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDEA 481
+ A L E+Q+ AL+ +Q P A+ + G+
Sbjct: 383 TFADAYSNMGNTLKEMQDVQGALQCYTRAIQIN------PAFADAHSNLASIHKDSGNIP 436
Query: 482 AAAGAFAQALKLAP 495
A ++ ALKL P
Sbjct: 437 EAIASYRTALKLKP 450
Score = 30.0 bits (66), Expect = 5.9
Identities = 63/305 (20%), Positives = 104/305 (34%), Gaps = 34/305 (11%)
Query: 206 RAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGP--GTVVPELRSLKPEAQALITQ 263
R EP N L + +H +L + A+K P L ++ E L Q
Sbjct: 39 RQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQL--Q 96
Query: 264 GLYSHCRALLSQLPD--------TGAPLEDKDTQGLLAVGEALIKIDSGQPHWHLLLADI 315
H R L PD A + D +G + + ++ + L ++
Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNL 156
Query: 316 LMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAARDLQSLAEVDAPDLS 375
L A G EEA KA+ P A + LG + +G++ A + +D L
Sbjct: 157 LKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD 216
Query: 376 CLLHLLEASERQSLAQAAAQEAGTLLDAGQPRQALGYCSLSVLASGSSACHLRLRATCLA 435
++L + + A A L +AL + G+ AC +
Sbjct: 217 AYINLGNVLKEARIFDRAV--AAYL-------RALSLSPNHAVVHGNLACVYYEQGLIDL 267
Query: 436 ELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDEAAAAGAFAQALKLAP 495
+ + RA+ LQ P + +C L G A A + AL+L P
Sbjct: 268 AIDTYRRAIE-----LQ--------PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCP 314
Query: 496 SLAQN 500
+ A +
Sbjct: 315 THADS 319
>gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens]
Length = 1046
Score = 33.1 bits (74), Expect = 0.70
Identities = 70/303 (23%), Positives = 106/303 (34%), Gaps = 58/303 (19%)
Query: 60 LYRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACL 119
L LGRLEE L A+ +P A + L + +G + A +K V L
Sbjct: 167 LKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT------L 220
Query: 120 QPT-LDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQAS 178
P LD + + L + RA+A AYL +
Sbjct: 221 DPNFLDAYINLGNVLKEARIFDRAVA-------------------AYLRALSLSPNHAVV 261
Query: 179 ESLLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSA 238
LA Y G A+ + + +P A C A + EA D +A
Sbjct: 262 HGNLACV--YYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 319
Query: 239 LKLGP--GTVVPELRSLKPEAQALITQGLYSHCRALLSQLPDTGAPLEDKDTQGLLAVGE 296
L+L P + L ++K E Q I + + + +AL P+ A
Sbjct: 320 LRLCPTHADSLNNLANIKRE-QGNIEEAVRLYRKAL-EVFPEFAAA-------------- 363
Query: 297 ALIKIDSGQPHWHLLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDV 356
H LA +L QG +EA H ++A+ +PT A + +G + DV
Sbjct: 364 ------------HSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDV 411
Query: 357 PGA 359
GA
Sbjct: 412 QGA 414
Score = 30.4 bits (67), Expect = 4.5
Identities = 44/194 (22%), Positives = 73/194 (37%), Gaps = 25/194 (12%)
Query: 305 QPHW---HLLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAAR 361
QPH+ + LA+ L +GS EA AL PT + L ++ ++G++ A R
Sbjct: 289 QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 348
Query: 362 DLQSLAEVDAPDLSCLLHLLEASERQSLAQAAAQEAGTLLDAGQPRQALGYCSLSVLASG 421
+ EV A A + A L G+ ++AL + ++ S
Sbjct: 349 LYRKALEV----------------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISP 392
Query: 422 SSACHLRLRATCLAELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDEA 481
+ A L E+Q+ AL+ +Q P A+ + G+
Sbjct: 393 TFADAYSNMGNTLKEMQDVQGALQCYTRAIQIN------PAFADAHSNLASIHKDSGNIP 446
Query: 482 AAAGAFAQALKLAP 495
A ++ ALKL P
Sbjct: 447 EAIASYRTALKLKP 460
Score = 30.0 bits (66), Expect = 5.9
Identities = 63/305 (20%), Positives = 104/305 (34%), Gaps = 34/305 (11%)
Query: 206 RAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGP--GTVVPELRSLKPEAQALITQ 263
R EP N L + +H +L + A+K P L ++ E L Q
Sbjct: 49 RQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQL--Q 106
Query: 264 GLYSHCRALLSQLPD--------TGAPLEDKDTQGLLAVGEALIKIDSGQPHWHLLLADI 315
H R L PD A + D +G + + ++ + L ++
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNL 166
Query: 316 LMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAARDLQSLAEVDAPDLS 375
L A G EEA KA+ P A + LG + +G++ A + +D L
Sbjct: 167 LKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD 226
Query: 376 CLLHLLEASERQSLAQAAAQEAGTLLDAGQPRQALGYCSLSVLASGSSACHLRLRATCLA 435
++L + + A A L +AL + G+ AC +
Sbjct: 227 AYINLGNVLKEARIFDRAV--AAYL-------RALSLSPNHAVVHGNLACVYYEQGLIDL 277
Query: 436 ELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDEAAAAGAFAQALKLAP 495
+ + RA+ LQ P + +C L G A A + AL+L P
Sbjct: 278 AIDTYRRAIE-----LQ--------PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCP 324
Query: 496 SLAQN 500
+ A +
Sbjct: 325 THADS 329
>gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo
sapiens]
Length = 770
Score = 33.1 bits (74), Expect = 0.70
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 16/130 (12%)
Query: 171 FAAGSQASESLLARARC------YGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLA 224
FA+ + +S +C Y +G+ AM ++N L + NV+AL R ++
Sbjct: 294 FASALRKKQSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEALVARGALYAT 353
Query: 225 LDQLQEAVDDIVSALKLGP----------GTVVPELRSLKPEAQALITQGLYSHCRALLS 274
L +A++D AL+ P T+V L+ E + L + Y AL
Sbjct: 354 KGSLNKAIEDFELALENCPTHRNARKYLCQTLVERGGQLEEEEKFLNAESYYKKALALDE 413
Query: 275 QLPDTGAPLE 284
D L+
Sbjct: 414 TFKDAEDALQ 423
>gi|110611917 tetratricopeptide repeat domain 14 isoform b [Homo
sapiens]
Length = 439
Score = 33.1 bits (74), Expect = 0.70
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 16/130 (12%)
Query: 171 FAAGSQASESLLARARC------YGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLA 224
FA+ + +S +C Y +G+ AM ++N L + NV+AL R ++
Sbjct: 294 FASALRKKQSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEALVARGALYAT 353
Query: 225 LDQLQEAVDDIVSALKLGP----------GTVVPELRSLKPEAQALITQGLYSHCRALLS 274
L +A++D AL+ P T+V L+ E + L + Y AL
Sbjct: 354 KGSLNKAIEDFELALENCPTHRNARKYLCQTLVERGGQLEEEEKFLNAESYYKKALALDE 413
Query: 275 QLPDTGAPLE 284
D L+
Sbjct: 414 TFKDAEDALQ 423
>gi|21450645 tetratricopeptide repeat domain 16 [Homo sapiens]
Length = 873
Score = 33.1 bits (74), Expect = 0.70
Identities = 49/229 (21%), Positives = 88/229 (38%), Gaps = 25/229 (10%)
Query: 192 GQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGPGTVVPELR 251
G+ + A+ N + P + R ++ L + AV+D + L + +R
Sbjct: 265 GKLQHALQRINRAIENNPLDPSLFLFRGTMYRRLQEFDGAVEDFLKVLDMVTEDQEDMVR 324
Query: 252 SLKPEAQALITQGLYS-HCRALLSQLPDTGAPLEDKDTQGLLAVGEALIKIDSGQPHWHL 310
+ + Q L+T ++ HC + +G+L + +AL + + + ++
Sbjct: 325 --QAQRQLLLTYNDFAVHCYR------------QGAYQEGVLLLNKAL-RDEQQEKGLYI 369
Query: 311 LLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAARDLQSL---- 366
D G+ A ++AL +P E A R+GLLQ K G + Q
Sbjct: 370 NRGDCFFQLGNLAFAEADYQQALALSPQDEGANTRMGLLQEKMGFCEQRRKQFQKAENHF 429
Query: 367 -AEVDAPDLSCLLHLLEASERQSLAQ--AAAQEAGT--LLDAGQPRQAL 410
+ +L A RQ L A Q+ T LL+ QP+ +L
Sbjct: 430 STAIRHNPQKAQYYLYRAKSRQLLQNIFGARQDVATVLLLNPKQPKLSL 478
>gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 2
[Homo sapiens]
Length = 438
Score = 32.7 bits (73), Expect = 0.91
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 182 LARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKL 241
+ +A C LG+ A + +LR + N AL R L D +++AV V AL++
Sbjct: 124 ILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRM 183
Query: 242 GP 243
P
Sbjct: 184 AP 185
Score = 31.6 bits (70), Expect = 2.0
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 452 QEALGDGDLPRRAED-----FCRQGRLLLSLGDEAAAAGAFAQALKLAPSLAQ 499
+EALGD R +D R+G+ LSLG+ AA +F +AL+L AQ
Sbjct: 23 REALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQ 75
>gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo
sapiens]
Length = 504
Score = 32.3 bits (72), Expect = 1.2
Identities = 43/184 (23%), Positives = 69/184 (37%), Gaps = 13/184 (7%)
Query: 313 ADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAARDLQSLAE---V 369
A + +A G + A L K + AAR + G L LK+G + A D + + +
Sbjct: 78 ATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPS 137
Query: 370 DAPDLSCLLHLLEASERQSLAQAAAQEAGTLLDAGQPRQALGYCSLSVLASGSSACHLRL 429
+ + L+++ E Q L A G +G A+ + + A L
Sbjct: 138 ENEEKEAQSQLIKSDEMQRLRSQALNAFG----SGDYTAAIAFLDKILEVCVWDAELREL 193
Query: 430 RATCLAELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDEAAAAGAFAQ 489
RA C + E +A+ DL + D E F + L LGD + +
Sbjct: 194 RAECFIKEGEPRKAISDL-KAASKLKND-----NTEAFYKISTLYYQLGDHELSLSEVRE 247
Query: 490 ALKL 493
LKL
Sbjct: 248 CLKL 251
>gi|221316695 multimerin 2 precursor [Homo sapiens]
Length = 949
Score = 32.3 bits (72), Expect = 1.2
Identities = 45/164 (27%), Positives = 60/164 (36%), Gaps = 15/164 (9%)
Query: 230 EAVDDIVSALKLGPGTVVPELRSLKPEAQALITQGLYSHC--------RALLSQLPDTGA 281
+A+DD V ALK E+R L AL+ L L T
Sbjct: 569 QALDDEVGALKAAAAEARHEVRQLHSAFAALLEDALRHEAVLAALFGEEVLEEMSEQTPG 628
Query: 282 PLEDKDTQGLLAVGEALIKIDSGQPHWHLLLADILMAQGSYE--EAGTHLEKALHRAPTS 339
PL Q +A+ +A + W L A + + + E HLE + H A
Sbjct: 629 PLPLSYEQIRVALQDAASGLQEQALGWDELAARVTALEQASEPPRPAEHLEPS-HDAGRE 687
Query: 340 EAARARL-GL---LQLKKGDVPGAARDLQSLAEVDAPDLSCLLH 379
EAA L GL LQ DV R ++ A A L+ LH
Sbjct: 688 EAATTALAGLARELQSLSNDVKNVGRCCEAEAGAGAASLNASLH 731
>gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo
sapiens]
Length = 860
Score = 32.3 bits (72), Expect = 1.2
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 161 EAIAYLSLAIFAAGSQASESLLARARCYGFLG-----QKKTAMFDFNTVLRAEPGNVQAL 215
EAI + S + S ++ R YG G + A+F+ + V+ EP +
Sbjct: 161 EAIRHFSTMLQEEPDLVS-AIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDRPEVF 219
Query: 216 CGRALVHLALDQLQEAVDDIVSALKLGP 243
RA + L ++ EAV+D+ A++L P
Sbjct: 220 EQRAEILSPLGRINEAVNDLTKAIQLQP 247
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,160,422
Number of Sequences: 37866
Number of extensions: 924246
Number of successful extensions: 2815
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2667
Number of HSP's gapped (non-prelim): 155
length of query: 566
length of database: 18,247,518
effective HSP length: 108
effective length of query: 458
effective length of database: 14,157,990
effective search space: 6484359420
effective search space used: 6484359420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.