Guide to the Human Genome
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Search of human proteins with 239740906

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239740906 PREDICTED: hypothetical protein XP_002344082 [Homo
sapiens]
         (138 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239740906 PREDICTED: hypothetical protein XP_002344082 [Homo ...   300   3e-82
gi|239740786 PREDICTED: hypothetical protein [Homo sapiens]           300   3e-82
gi|239740731 PREDICTED: hypothetical protein [Homo sapiens]           300   3e-82
gi|157168329 formin 1 [Homo sapiens]                                   45   1e-05
gi|95147555 microtubule-associated protein 1A [Homo sapiens]           43   9e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    42   2e-04
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]                41   4e-04
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]                41   4e-04
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]             40   5e-04
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote...    40   5e-04
gi|40807452 peroxisome proliferator-activated receptor gamma, co...    40   5e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    40   6e-04
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]                40   6e-04
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol...    40   6e-04
gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]    39   0.001
gi|239741321 PREDICTED: hypothetical protein XP_002342193 [Homo ...    39   0.002
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     38   0.002
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     38   0.002
gi|11386183 WAS protein family, member 2 [Homo sapiens]                38   0.002
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                38   0.002
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]        38   0.003
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [...    38   0.003
gi|239756026 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho...    37   0.004
gi|239752908 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho...    37   0.004
gi|239750549 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho...    37   0.004
gi|239747457 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho...    37   0.004
gi|239744846 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho...    37   0.004
gi|239741331 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho...    37   0.004
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re...    37   0.004
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re...    37   0.004

>gi|239740906 PREDICTED: hypothetical protein XP_002344082 [Homo
           sapiens]
          Length = 138

 Score =  300 bits (767), Expect = 3e-82
 Identities = 138/138 (100%), Positives = 138/138 (100%)

Query: 1   MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
           MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG
Sbjct: 1   MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60

Query: 61  PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120
           PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES
Sbjct: 61  PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120

Query: 121 PSSSLGDWELWLLAGVLV 138
           PSSSLGDWELWLLAGVLV
Sbjct: 121 PSSSLGDWELWLLAGVLV 138


>gi|239740786 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 138

 Score =  300 bits (767), Expect = 3e-82
 Identities = 138/138 (100%), Positives = 138/138 (100%)

Query: 1   MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
           MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG
Sbjct: 1   MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60

Query: 61  PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120
           PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES
Sbjct: 61  PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120

Query: 121 PSSSLGDWELWLLAGVLV 138
           PSSSLGDWELWLLAGVLV
Sbjct: 121 PSSSLGDWELWLLAGVLV 138


>gi|239740731 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 138

 Score =  300 bits (767), Expect = 3e-82
 Identities = 138/138 (100%), Positives = 138/138 (100%)

Query: 1   MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
           MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG
Sbjct: 1   MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60

Query: 61  PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120
           PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES
Sbjct: 61  PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120

Query: 121 PSSSLGDWELWLLAGVLV 138
           PSSSLGDWELWLLAGVLV
Sbjct: 121 PSSSLGDWELWLLAGVLV 138


>gi|157168329 formin 1 [Homo sapiens]
          Length = 1196

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 13  PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPH 72
           PV A   LP P  P    P P   G PP  PP P    LP S    +   PPPA P  P 
Sbjct: 673 PVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPP----LPNSPAPPNPGGPPPAPPP-PG 727

Query: 73  RLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDL 104
             P  P G    L SS +   R P +   C +
Sbjct: 728 LAPPPPPGLFFGLGSSSSQCPRKPAIEPSCPM 759



 Score = 32.0 bits (71), Expect = 0.17
 Identities = 32/94 (34%), Positives = 36/94 (38%), Gaps = 10/94 (10%)

Query: 10  AVAPVVASVYLPAPRAPFELW------PDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAP 63
           A+ P  AS+  P P  P  L       P P     PP  PP P    LP     S+GP P
Sbjct: 644 ALPPPPASIP-PPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPP--SSAGPPP 700

Query: 64  PPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPP 97
           PP  P  P+  P  P          P  L  PPP
Sbjct: 701 PPPPPPLPNS-PAPPNPGGPPPAPPPPGLAPPPP 733


>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
          Length = 2803

 Score = 42.7 bits (99), Expect = 9e-05
 Identities = 33/89 (37%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 21   PAPRAPFELWPDPEREGQPP---HLPPTPGSLGLPGSGHGSSG--PAPPP-ASPSHPHRL 74
            P P     LWP+ E    PP   HL P   SL  P S  G S   PAPP   SP+ P   
Sbjct: 2130 PIPMGSPTLWPETEAHVSPPLDSHLGPARPSLDFPASAFGFSSLQPAPPQLPSPAEPRS- 2188

Query: 75   PLQPLGFLSFLVSSPTHLQRPPPLLSRCD 103
               P G L+F       L   PP  +R D
Sbjct: 2189 --APCGSLAFSGDRALALAPGPPTRTRHD 2215


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 41.6 bits (96), Expect = 2e-04
 Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 14/102 (13%)

Query: 13  PVVASVYLPAP---RAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPS 69
           PVVA    PAP    AP      P     PP  PPT G+   PGSG G + P PPPA  S
Sbjct: 109 PVVAQGPGPAPGVGSAP------PASSSAPPATPPTSGAP--PGSGPGPT-PTPPPAVTS 159

Query: 70  HPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPR 111
            P   P  P    S + ++P     PPP  +    G GP P+
Sbjct: 160 APPGAP-PPTPPSSGVPTTPPQAGGPPPPPAAVP-GPGPGPK 199



 Score = 36.6 bits (83), Expect = 0.007
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 31  PDPEREGQPPHLPP-TPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLG 80
           P P     PP  PP TP S G+P +   + GP PPPA+   P   P Q  G
Sbjct: 153 PPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPG 203



 Score = 32.7 bits (73), Expect = 0.098
 Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 14/67 (20%)

Query: 31  PDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPT 90
           P P + G  P +PP P     P        P  PP     PH+ P  P          P 
Sbjct: 49  PGPGQSGPKPPIPPPP-----PHQQQQQPPPQQPPPQQPPPHQPPPHP---------QPH 94

Query: 91  HLQRPPP 97
             Q+PPP
Sbjct: 95  QQQQPPP 101



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 8/59 (13%)

Query: 44 PTPG-----SLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPP 97
          P PG     + G  G G G SGP  PP  P  PH+   QP          P H  +PPP
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGP-KPPIPPPPPHQQQQQPPPQQPPPQQPPPH--QPPP 89


>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
          Length = 1240

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 35/106 (33%), Positives = 38/106 (35%), Gaps = 26/106 (24%)

Query: 21  PAPRAPFELWPDPEREGQPPHLPPTPGSLGL----------PGSGHGSSGPAPPPASPSH 70
           P P  P  L P    E  PP  PP   S+G           P  G G+  P  PP  P  
Sbjct: 421 PPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPL 480

Query: 71  PHRLPLQPLGFLSFLVSSPTHL------QRPPPLLSRCDLGWGPTP 110
           P        G   FL   P  L        PPPLL    +GWGP P
Sbjct: 481 P--------GSCEFLPPPPPPLPGLGCPPPPPPLLP--GMGWGPPP 516



 Score = 33.1 bits (74), Expect = 0.075
 Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 21/121 (17%)

Query: 3   PQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLP----PTPGSLGLPGSGHGS 58
           P +  L A+AP    +  P P +  E  P P     PP LP    P P    LPG G G 
Sbjct: 461 PPLPGLGAMAPPAPPLPPPLPGS-CEFLPPP-----PPPLPGLGCPPPPPPLLPGMGWGP 514

Query: 59  SGPAPP--PASPSHPHRLPLQPL-------GFLSFLVSSPTHLQRPPPLLSRCDLGWGPT 109
             P PP  P + S P    ++ +       G  S  V  P+H +  PP L    L W   
Sbjct: 515 PPPPPPLLPCTCSPPVAGGMEEVIVAQVDHGLGSAWV--PSHRRVNPPTLRMKKLNWQKL 572

Query: 110 P 110
           P
Sbjct: 573 P 573


>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
          Length = 1249

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 35/106 (33%), Positives = 38/106 (35%), Gaps = 26/106 (24%)

Query: 21  PAPRAPFELWPDPEREGQPPHLPPTPGSLGL----------PGSGHGSSGPAPPPASPSH 70
           P P  P  L P    E  PP  PP   S+G           P  G G+  P  PP  P  
Sbjct: 421 PPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPL 480

Query: 71  PHRLPLQPLGFLSFLVSSPTHL------QRPPPLLSRCDLGWGPTP 110
           P        G   FL   P  L        PPPLL    +GWGP P
Sbjct: 481 P--------GSCEFLPPPPPPLPGLGCPPPPPPLLP--GMGWGPPP 516



 Score = 33.1 bits (74), Expect = 0.075
 Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 21/121 (17%)

Query: 3   PQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLP----PTPGSLGLPGSGHGS 58
           P +  L A+AP    +  P P +  E  P P     PP LP    P P    LPG G G 
Sbjct: 461 PPLPGLGAMAPPAPPLPPPLPGS-CEFLPPP-----PPPLPGLGCPPPPPPLLPGMGWGP 514

Query: 59  SGPAPP--PASPSHPHRLPLQPL-------GFLSFLVSSPTHLQRPPPLLSRCDLGWGPT 109
             P PP  P + S P    ++ +       G  S  V  P+H +  PP L    L W   
Sbjct: 515 PPPPPPLLPCTCSPPVAGGMEEVIVAQVDHGLGSAWV--PSHRRVNPPTLRMKKLNWQKL 572

Query: 110 P 110
           P
Sbjct: 573 P 573


>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
          Length = 502

 Score = 40.4 bits (93), Expect = 5e-04
 Identities = 23/52 (44%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 21  PAPRAPFELWPDPEREGQPPHLPPTPGSLG-LPGSGHGSSGPAPPPASPSHP 71
           P PR P    P P R G PP  PP  G  G LP    G+ GP  PP  P  P
Sbjct: 354 PTPRGP----PPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPP 401



 Score = 35.8 bits (81), Expect = 0.012
 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 21  PAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPS 69
           PA      L P P   G PP  PP P     P SG   +GPAPPP  P+
Sbjct: 373 PATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSG---NGPAPPPLPPA 418



 Score = 33.1 bits (74), Expect = 0.075
 Identities = 24/68 (35%), Positives = 25/68 (36%), Gaps = 6/68 (8%)

Query: 43  PPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRC 102
           PP P   G P  G G   P PPPA+      LP  P G        P     PPP     
Sbjct: 351 PPPPTPRGPPPPGRGGPPPPPPPAT-GRSGPLPPPPPG-----AGGPPMPPPPPPPPPPP 404

Query: 103 DLGWGPTP 110
             G GP P
Sbjct: 405 SSGNGPAP 412


>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
           1 [Homo sapiens]
          Length = 828

 Score = 40.4 bits (93), Expect = 5e-04
 Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 26/91 (28%)

Query: 34  EREGQPPHLPPT---------PGSLGLPGSGHGSSGPA----------------PPPASP 68
           +R   PP  PPT         PGS   PG+  G+S PA                PPP  P
Sbjct: 407 QRATPPPPPPPTYRTVVSSPGPGSGPGPGTTSGASSPARPATPLVPCRSTTPPPPPPRPP 466

Query: 69  SHPHRLPLQP-LGFLSFLVSSPTHLQRPPPL 98
           S P   P +P +G +S   S P H   PPP+
Sbjct: 467 SRPKLPPGKPGVGDVSRPFSPPIHSSSPPPI 497



 Score = 27.3 bits (59), Expect = 4.1
 Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 33  PEREGQPPHLPPTPGSL-----GLPGSGHGSSGPAPPPASPSHPHRLPL 76
           P R   PP  PP P S      G PG G  S   +PP  S S P   PL
Sbjct: 452 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAPL 500



 Score = 26.9 bits (58), Expect = 5.4
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 7/47 (14%)

Query: 34  EREGQPPHLP------PTPGSLGLPGSGHGSSGPAPPPASPSHPHRL 74
           E+   PP  P      P PG LG PG   G  GP  PP +   P  L
Sbjct: 331 EKVVSPPATPDNPADSPAPGPLGPPGP-TGPPGPPGPPRNVLSPLNL 376


>gi|40807452 peroxisome proliferator-activated receptor gamma,
           coactivator-related 1 [Homo sapiens]
          Length = 1664

 Score = 40.4 bits (93), Expect = 5e-04
 Identities = 45/152 (29%), Positives = 58/152 (38%), Gaps = 37/152 (24%)

Query: 4   QVAVLAAVAPVVASVY--LPAPRAPFELWPDPERE-GQPPHLPPTPGSLGLPGSGHGSSG 60
           ++ +LA  +P V SV   +P P +     P P    G PP LPP P     P S   S G
Sbjct: 851 EMPLLARPSPPVQSVSPAVPTPPSMSAALPFPAGGLGMPPSLPPPPLQ---PPSLPLSMG 907

Query: 61  P---------APPPASPSHPHRLP-----LQPLGFLSFLVSSPTHLQRPP---------- 96
           P         AP P+ P +PH  P     L P   +  +  +P     PP          
Sbjct: 908 PVLPDPFTHYAPLPSWPCYPHVSPSGYPCLPPPPTVPLVSGTPGAYAVPPTCSVPWAPPP 967

Query: 97  ----PLLSRCD---LGWGPTPRGQSWWRRESP 121
               P  S C    LGWGP P+   +W    P
Sbjct: 968 APVSPYSSTCTYGPLGWGPGPQHAPFWSTVPP 999



 Score = 29.6 bits (65), Expect = 0.83
 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 26/87 (29%)

Query: 21   PAPRAPFELW---PDPERE------GQPPHLPPT----PGSLGLPGSGHGSSGPA----- 62
            P P  P  +    P P+ E      G P ++ P     P SLGLPG G   + P      
Sbjct: 999  PPPLPPASIGRAVPQPKMESRGTPAGPPENVLPLSMAPPLSLGLPGHGAPQTEPTKVEVK 1058

Query: 63   PPPASPSHPHRLPLQPLGFLSFLVSSP 89
            P PASP   H+        +S LV SP
Sbjct: 1059 PVPASPHPKHK--------VSALVQSP 1077


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 40.0 bits (92), Expect = 6e-04
 Identities = 28/69 (40%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 28   ELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVS 87
            EL   P  +G PP LP  PG+L   G   G   P PPP+SP  P R    P    S    
Sbjct: 4276 ELGAGPRPQG-PPRLPAPPGALST-GPVLGPVHPTPPPSSPQEPKR----PSQLPSPSSQ 4329

Query: 88   SPTHLQRPP 96
             PT  Q PP
Sbjct: 4330 LPTEAQLPP 4338



 Score = 32.0 bits (71), Expect = 0.17
 Identities = 35/115 (30%), Positives = 40/115 (34%), Gaps = 22/115 (19%)

Query: 23   PRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFL 82
            P AP    P P   G P   PP  G+   PG+G        PP +P H    P  P  FL
Sbjct: 2190 PTAPPTYPPYPSPTGAPAQ-PPMLGASSRPGAGQPGEFHTTPPGTPRHQ---PSTPDPFL 2245

Query: 83   SFLVSSPTHLQRP-----------PPLLSRCDLGWGPTPRGQSWWRRESPSSSLG 126
                 S  +L  P            PLLS       P P G+S    E     LG
Sbjct: 2246 KPRCPSLDNLAVPESPGVGGGKASEPLLS-------PPPFGESRKALEVKKEELG 2293



 Score = 26.2 bits (56), Expect = 9.2
 Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 19   YLPAPRAPFELWPDPER----EGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRL 74
            + P    P  L P+  R     G PP  P  P +  L  S H    P P    P+ P  L
Sbjct: 2906 FYPVSEDPHRLAPEGLRGLAVSGLPPQKPSAPPAPELNNSLH----PTPHTKGPTLPTGL 2961

Query: 75   PL--QPLGFLSFLVSSPTHLQRPPPL 98
             L  +P         S T L RP PL
Sbjct: 2962 ELVNRP--------PSSTELGRPNPL 2979


>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
          Length = 424

 Score = 40.0 bits (92), Expect = 6e-04
 Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 7/81 (8%)

Query: 21  PAPRAPFEL-WPDPEREGQPPHLPPTPGSLGLPGS--GHGSSGPAPPPASPSHPHRLPLQ 77
           P PR P  +  P P   G PP  PP    +G PG    HG  GP  PP  P H +  P +
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGP--PPLMPPHGYTGPPR 390

Query: 78  --PLGFLSFLVSSPTHLQRPP 96
             P G+    +  P    RPP
Sbjct: 391 PPPYGYQRGPLPPPRPTPRPP 411



 Score = 38.1 bits (87), Expect = 0.002
 Identities = 35/106 (33%), Positives = 40/106 (37%), Gaps = 7/106 (6%)

Query: 13  PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAP-PPASPSHP 71
           PV     LP P  P  + P P   G   H PP+ G+ G    GHG S P P PP    HP
Sbjct: 246 PVPPPGALP-PGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHP 304

Query: 72  HRLPLQ-----PLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRG 112
               +Q     P G        P    +PPP         GP P G
Sbjct: 305 GMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMG 350



 Score = 29.6 bits (65), Expect = 0.83
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 21  PAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHP 71
           P P AP  +         PP +PP PGS   P    G+  P  PPA P  P
Sbjct: 216 PPPSAPNPVVSSLGSGLPPPGMPP-PGSFPPPVPPPGALPPGIPPAMPPPP 265



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 2/78 (2%)

Query: 33  PEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHL 92
           P   GQPP  PP PG +  PG       P  PP      H  P+ P G        P H 
Sbjct: 327 PGSGGQPPPRPP-PG-MPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHG 384

Query: 93  QRPPPLLSRCDLGWGPTP 110
              PP         GP P
Sbjct: 385 YTGPPRPPPYGYQRGPLP 402


>gi|47825361 non-specific cytotoxic cell receptor protein 1 homolog
           [Homo sapiens]
          Length = 275

 Score = 40.0 bits (92), Expect = 6e-04
 Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 12/123 (9%)

Query: 23  PRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPS--HPHRLPLQPLG 80
           P +  EL P P     PP  PP P    LP      +   P PA PS  H  +L L+  G
Sbjct: 19  PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEWG 78

Query: 81  FLSFLVSSPTHLQRPPPLLSR---CDLGWGPTPRGQSWWR-------RESPSSSLGDWEL 130
            LS  +  P  L     LL R    +L   P P G + +         + P  +LG++  
Sbjct: 79  PLSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPAPPTGPTQRPLETLGNFRG 138

Query: 131 WLL 133
           W +
Sbjct: 139 WYI 141


>gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]
          Length = 955

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 39/135 (28%), Positives = 51/135 (37%), Gaps = 16/135 (11%)

Query: 9   AAVAPVVASVYLPAPRAPFELWPDPEREG-QPPHLPPTPGSLGLPGSGHGSSGPAPPPAS 67
           A +AP         P     L P+  R    P H PP+    G PG   G      P  +
Sbjct: 267 AVLAPSAILQPRQHPSKMLLLLPEAGRPALSPGHSPPS----GAPGPPAGVRTTRLPSPT 322

Query: 68  PSHPHRLPLQPLGFLSFLVSSPTHLQ------RPPPLLSRCDLGWGPTPRGQSWWRRESP 121
           P  P   P  P+  LS L+++P          RPP LL    +G   +PRG      ESP
Sbjct: 323 PRLPTSSPSAPVWLLSTLLATPVPTASLLGNLRPPSLLQGEVMGTPSSPRGP-----ESP 377

Query: 122 SSSLGDWELWLLAGV 136
             + G    W L  +
Sbjct: 378 RLAAGPSPCWHLGAM 392



 Score = 28.5 bits (62), Expect = 1.8
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 16/57 (28%)

Query: 26  PFELWPDPEREGQPPHLPPTPGSLGLPGSG---HG--------SSGPAPPPASPSHP 71
           P  L P  E++G  PH     G++    +G   HG        SS P PP ASPS P
Sbjct: 743 PDSLSPLEEKQGLSPH-----GNVAFSKAGRSLHGDTEAPVNCSSCPGPPTASPSRP 794



 Score = 26.9 bits (58), Expect = 5.4
 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 10/66 (15%)

Query: 33  PEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHL 92
           P   G  P L P P +   PG+      P  P ASP  P   P+ P    SF  S    +
Sbjct: 835 PGEPGASPRLSPGPSTP--PGA------PTLPLASPGAPQPPPVTP--ERSFSASGAQIV 884

Query: 93  QRPPPL 98
            R PPL
Sbjct: 885 SRWPPL 890


>gi|239741321 PREDICTED: hypothetical protein XP_002342193 [Homo
           sapiens]
          Length = 123

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 15/100 (15%)

Query: 23  PRAPFELWPDPEREGQPPHLPP--TPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLG 80
           P AP  + P+      PP + P   PG L        ++ PAP P + S P   P     
Sbjct: 24  PTAPLAILPNHSLPKIPPTVTPHDNPGRLS-------AAAPAPQPRALSPPRFCPPP--- 73

Query: 81  FLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120
            LS L +SP  L   P L    D G+  TP G + W+R S
Sbjct: 74  -LSSLCTSPPWLPLSPELT--VDAGFFRTPLGNTEWKRGS 110


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 6/69 (8%)

Query: 13  PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPH 72
           P+  S  +P P  P      P   G PP  PP PG  G+P       GP  PP  P    
Sbjct: 684 PLPGSAGIPPPPPPL-----PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG-MG 737

Query: 73  RLPLQPLGF 81
             P  P GF
Sbjct: 738 MPPPPPFGF 746



 Score = 37.0 bits (84), Expect = 0.005
 Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 10/102 (9%)

Query: 6   AVLAAVAPVVASVYLPAPRA---PFELWPDPEREGQ---PPHLPPTPGSLGLPGSG---H 56
           A +    P+   V +P+P +      + P P   G    PP  PP PGS G+P       
Sbjct: 640 ATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLP 699

Query: 57  GSSG-PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPP 97
           G +G P PPP  P  P   P  P      +   P  +  PPP
Sbjct: 700 GEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPP 741



 Score = 32.3 bits (72), Expect = 0.13
 Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 9/106 (8%)

Query: 13  PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGS--LGLPGSGHGSSGPAPPP----- 65
           P  +   +P P AP +    P     PP  PP PG   +  P S  G +  +PPP     
Sbjct: 580 PGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGD 639

Query: 66  ASPSHPHRLPLQPLGFLS-FLVSSPTHLQRPPPLLSRCDLGWGPTP 110
           A+   P  LP + +G  S   +   T +  PPPL     +   P P
Sbjct: 640 ATIPPPPPLP-EGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPP 684



 Score = 27.7 bits (60), Expect = 3.1
 Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 25/79 (31%)

Query: 39  PPHLP---PTPGSLGLPGSG----------HGSSGPAPPPASPSHPHRLPLQPLGFLSFL 85
           PP +P   P P +  LPG              S+ P PPP  P  P  LP          
Sbjct: 564 PPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLP------GGVC 617

Query: 86  VSSP------THLQRPPPL 98
           +SSP      T +  PPPL
Sbjct: 618 ISSPPSLPGGTAISPPPPL 636


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 6/69 (8%)

Query: 13  PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPH 72
           P+  S  +P P  P      P   G PP  PP PG  G+P       GP  PP  P    
Sbjct: 693 PLPGSAGIPPPPPPL-----PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG-MG 746

Query: 73  RLPLQPLGF 81
             P  P GF
Sbjct: 747 MPPPPPFGF 755



 Score = 37.0 bits (84), Expect = 0.005
 Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 10/102 (9%)

Query: 6   AVLAAVAPVVASVYLPAPRA---PFELWPDPEREGQ---PPHLPPTPGSLGLPGSG---H 56
           A +    P+   V +P+P +      + P P   G    PP  PP PGS G+P       
Sbjct: 649 ATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLP 708

Query: 57  GSSG-PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPP 97
           G +G P PPP  P  P   P  P      +   P  +  PPP
Sbjct: 709 GEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPP 750



 Score = 32.3 bits (72), Expect = 0.13
 Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 9/106 (8%)

Query: 13  PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGS--LGLPGSGHGSSGPAPPP----- 65
           P  +   +P P AP +    P     PP  PP PG   +  P S  G +  +PPP     
Sbjct: 589 PGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGD 648

Query: 66  ASPSHPHRLPLQPLGFLS-FLVSSPTHLQRPPPLLSRCDLGWGPTP 110
           A+   P  LP + +G  S   +   T +  PPPL     +   P P
Sbjct: 649 ATIPPPPPLP-EGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPP 693



 Score = 27.7 bits (60), Expect = 3.1
 Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 25/79 (31%)

Query: 39  PPHLP---PTPGSLGLPGSG----------HGSSGPAPPPASPSHPHRLPLQPLGFLSFL 85
           PP +P   P P +  LPG              S+ P PPP  P  P  LP          
Sbjct: 573 PPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLP------GGVC 626

Query: 86  VSSP------THLQRPPPL 98
           +SSP      T +  PPPL
Sbjct: 627 ISSPPSLPGGTAISPPPPL 645


>gi|11386183 WAS protein family, member 2 [Homo sapiens]
          Length = 498

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 15  VASVYLPAPRAPFELWPDPEREGQPPHLPPTPGS--LGLPGS----GHGSSGPAPPPASP 68
           V S   P P  P    P P+    PP  PP P    +G+P      G GS G  PPP+ P
Sbjct: 294 VVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPP 353

Query: 69  SHP 71
           S P
Sbjct: 354 SFP 356



 Score = 33.5 bits (75), Expect = 0.057
 Identities = 36/124 (29%), Positives = 43/124 (34%), Gaps = 22/124 (17%)

Query: 3   PQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREG-----------QPPHLPPTPGSLGL 51
           PQ    ++ +P  +   LP P A F    D +R              P H PP P     
Sbjct: 250 PQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSP 309

Query: 52  PGSGHGSSGPAPPPASPSHPHRL-----PLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGW 106
           PG      G APPPA P  P  +     P  P+GF S     P     PP      D   
Sbjct: 310 PGP---KPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPP---PSPPSFPPHPDFAA 363

Query: 107 GPTP 110
            P P
Sbjct: 364 PPPP 367



 Score = 32.3 bits (72), Expect = 0.13
 Identities = 30/92 (32%), Positives = 35/92 (38%), Gaps = 26/92 (28%)

Query: 19  YLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPA-------------PPP 65
           + P P  P    P P   G PP  PP P   G PG+    S P+             PPP
Sbjct: 316 FAPPPAPPP---PPPPMIGIPP--PPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPP 370

Query: 66  ASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPP 97
            +  +P  LP  PL       S PT    PPP
Sbjct: 371 PAADYP-TLPPPPL-------SQPTGGAPPPP 394



 Score = 32.0 bits (71), Expect = 0.17
 Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 9/78 (11%)

Query: 3   PQVAVLAAVAPV-VASVYLPAPRAPFELWPDPEREGQPPHLPPT--------PGSLGLPG 53
           P + +     PV   S   P P +P    P P+    PP  PP         P  L  P 
Sbjct: 328 PMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPT 387

Query: 54  SGHGSSGPAPPPASPSHP 71
            G     P PPP  P  P
Sbjct: 388 GGAPPPPPPPPPPGPPPP 405



 Score = 26.9 bits (58), Expect = 5.4
 Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 6/53 (11%)

Query: 21  PAPRAPFELWPDPEREGQ------PPHLPPTPGSLGLPGSGHGSSGPAPPPAS 67
           P P A +   P P           PP  PP PG    P +G       PPP S
Sbjct: 369 PPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPPPLS 421


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 6/52 (11%)

Query: 20  LPAPRAPFELWPDPEREGQP-PHLPP-TPGSLGLPGSG----HGSSGPAPPP 65
           +P P  P +L  +P   G+P P  PP  PG  G PG G    HG  GPA PP
Sbjct: 66  MPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPP 117



 Score = 30.4 bits (67), Expect = 0.49
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 8/41 (19%)

Query: 33  PEREGQPPHLPPTPGSLGLPG-----SGHGSSGPAPPPASP 68
           P+  G PP LP   GS GLPG        G +GP  PP  P
Sbjct: 353 PQGLGGPPGLP---GSAGLPGRRGPPGPKGEAGPGGPPGVP 390



 Score = 30.4 bits (67), Expect = 0.49
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 31  PDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHP 71
           P   R G+P    PT G  G+PGS  G +GP  PP  P  P
Sbjct: 492 PGEGRAGEPGTAGPT-GPPGVPGS-PGITGPPGPPGPPGPP 530



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 20  LPAPRAPFELWPDPEREGQPPHLPPTP-GSLGLPGSGHGSSGPAPPP 65
           LP P+ P     +P   G P  + PT  G  GLPG   G  GPA  P
Sbjct: 288 LPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGP-KGDRGPAGVP 333



 Score = 27.7 bits (60), Expect = 3.1
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 4/30 (13%)

Query: 39  PPHLPPTPGSLGLPGSGHGSSGPAPPPASP 68
           PP +P +PG  G P    G  GP  PP +P
Sbjct: 508 PPGVPGSPGITGPP----GPPGPPGPPGAP 533



 Score = 27.3 bits (59), Expect = 4.1
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 7/40 (17%)

Query: 39  PPHLPPTPGSLGLPG-------SGHGSSGPAPPPASPSHP 71
           P  LP   G  GLPG          G++GP  PP  P  P
Sbjct: 476 PQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSP 515


>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
          Length = 1488

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 10/82 (12%)

Query: 18   VYLPAPRAPFELWPDPERE--GQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLP 75
            +Y PAP+ P      P+       P + P  G+ G PGS        PP  S SHPH  P
Sbjct: 1370 LYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGS-------RPPGGSYSHPHH-P 1421

Query: 76   LQPLGFLSFLVSSPTHLQRPPP 97
              PL   S +   P++   PPP
Sbjct: 1422 QSPLSPHSPIPPHPSYPPLPPP 1443



 Score = 32.3 bits (72), Expect = 0.13
 Identities = 23/57 (40%), Positives = 24/57 (42%), Gaps = 7/57 (12%)

Query: 40   PHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPP 96
            PH P +P S   P   H S  P PPP SP  PH  PL P          P H   PP
Sbjct: 1418 PHHPQSPLSPHSPIPPHPSYPPLPPP-SPHTPHS-PLPPTS-----PHGPLHASGPP 1467



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 22   APRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLP 75
            +P +P    P P     PP  P TP S   P S HG    + PP + + P   P
Sbjct: 1426 SPHSPIP--PHPSYPPLPPPSPHTPHSPLPPTSPHGPLHASGPPGTANPPSANP 1477



 Score = 27.7 bits (60), Expect = 3.1
 Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 7/53 (13%)

Query: 21   PAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHR 73
            P P  P  L P       PP  PP    L       GS  P P  A P  PHR
Sbjct: 1275 PGPAPPPYLPPQQPSLPPPPQQPPPLPQL-------GSIPPPPASAPPVGPHR 1320



 Score = 26.2 bits (56), Expect = 9.2
 Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 14/39 (35%)

Query: 60   GPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPL 98
            GPAPPP  P      P QP        S P   Q+PPPL
Sbjct: 1276 GPAPPPYLP------PQQP--------SLPPPPQQPPPL 1300


>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
            sapiens]
          Length = 1636

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 33/105 (31%), Positives = 41/105 (39%), Gaps = 14/105 (13%)

Query: 13   PVVASVYLPAPRAPFELWPDPEREGQPP---HLPPTPGSLGLPGSGHGSSGPAPPPASPS 69
            P  A   LP P++P+   P P   GQPP   H    PG    P   H  + P P P  P 
Sbjct: 985  PPQAPGLLP-PQSPYPYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQ 1043

Query: 70   HPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQS 114
             PH     PL +     + P   Q  P  +       GP+  GQS
Sbjct: 1044 PPH----PPLAYGPAPSTRPMGPQAAPLTIR------GPSSAGQS 1078



 Score = 30.8 bits (68), Expect = 0.37
 Identities = 31/101 (30%), Positives = 40/101 (39%), Gaps = 5/101 (4%)

Query: 12   APVVASVYLPAPRAPFELWPDPEREGQPPHLPPTP-GSLGLPGSGHGSSGPAPPPAS-PS 69
            AP    +  P P    +L+P P ++  P H    P  S G P   H      P P++ P 
Sbjct: 1001 APQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQPPHPPLAYGPAPSTRPM 1060

Query: 70   HPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
             P   PL   G  S   S+P+    P P  S    G GP P
Sbjct: 1061 GPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSP---GPGPVP 1098



 Score = 29.3 bits (64), Expect = 1.1
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 12/51 (23%)

Query: 39  PPHLPPTPGSLGLPGSGHGSSGPAPP-----------PASPSHPHRLPLQP 78
           P H PP+P         H  SGP PP           P +P  PH +P+ P
Sbjct: 768 PLHFPPSPFPSSTGPGPHYLSGPLPPGTYSGPTQLIQPRAPG-PHAMPVAP 817



 Score = 26.6 bits (57), Expect = 7.0
 Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 21/68 (30%)

Query: 1    MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
            M PQ A L    P  A    P+                 PHL P+P     P  G G   
Sbjct: 1060 MGPQAAPLTIRGPSSAGQSTPS-----------------PHLVPSPA----PSPGPGPVP 1098

Query: 61   PAPPPASP 68
            P PP A P
Sbjct: 1099 PRPPAAEP 1106


>gi|239756026 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
           sapiens]
          Length = 341

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 18/118 (15%)

Query: 2   TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGL-------P 52
           +P   +L    P      LPAP     LWP+    +     +LP +PG L +        
Sbjct: 169 SPAGGILPFGRPDPLPTVLPAPVPGCSLWPEKAALKVLGKDYLPSSPGLLMVGEDMQPKD 228

Query: 53  GSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
            +  GSS  +PP A+    H+  L            P  LQ  PPL  R D   GP P
Sbjct: 229 PAALGSSRSSPPKAAGHRSHKRKLS---------GPPLQLQPTPPLQLRWDRDEGPPP 277


>gi|239752908 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
           sapiens]
          Length = 341

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 34/111 (30%), Positives = 43/111 (38%), Gaps = 4/111 (3%)

Query: 2   TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGLPGSGHGSS 59
           +P   +L+   P      LPAP     LWP+    +     HLP +PG L + G      
Sbjct: 169 SPAGGILSFGKPDPLPTVLPAPVPGCSLWPEKAALKVLGKDHLPSSPGLL-MVGEDMQPK 227

Query: 60  GPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
            PA   +S S P R           L   P  LQ  PPL  + D   GP P
Sbjct: 228 DPAALGSSRSSPSRAASHS-SHKRKLSEPPLQLQPTPPLQLKWDRDEGPPP 277


>gi|239750549 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
           sapiens]
          Length = 341

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 18/118 (15%)

Query: 2   TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGL-------P 52
           +P   +L    P      LPAP     LWP+    +     +LP +PG L +        
Sbjct: 169 SPAGGILPFGRPDPLPTVLPAPVPGCSLWPEKAALKVLGKDYLPSSPGLLMVGEDMQPKD 228

Query: 53  GSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
            +  GSS  +PP A+    H+  L            P  LQ  PPL  R D   GP P
Sbjct: 229 PAALGSSRSSPPKAAGHRSHKRKLS---------GPPLQLQPTPPLQLRWDRDEGPPP 277


>gi|239747457 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
           sapiens]
          Length = 341

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 34/111 (30%), Positives = 43/111 (38%), Gaps = 4/111 (3%)

Query: 2   TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGLPGSGHGSS 59
           +P   +L+   P      LPAP     LWP+    +     HLP +PG L + G      
Sbjct: 169 SPAGGILSFGKPDPLPTVLPAPVPGCSLWPEKAALKVLGKDHLPSSPGLL-MVGEDMQPK 227

Query: 60  GPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
            PA   +S S P R           L   P  LQ  PPL  + D   GP P
Sbjct: 228 DPAALGSSRSSPSRAASHS-SHKRKLSEPPLQLQPTPPLQLKWDRDEGPPP 277


>gi|239744846 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
           sapiens]
          Length = 341

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 18/118 (15%)

Query: 2   TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGL-------P 52
           +P   +L    P      LPAP     LWP+    +     +LP +PG L +        
Sbjct: 169 SPAGGILPFGRPDSLPTVLPAPVPGCSLWPEKAALKVLGKDYLPSSPGLLMVGEDMQPKD 228

Query: 53  GSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
            +  GSS  +PP A+    H+  L            P  LQ  PPL  R D   GP P
Sbjct: 229 PAALGSSRSSPPKAAGHRSHKRKLS---------GPPLQLQPTPPLQLRWDRDEGPPP 277


>gi|239741331 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
           sapiens]
          Length = 341

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 34/111 (30%), Positives = 43/111 (38%), Gaps = 4/111 (3%)

Query: 2   TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGLPGSGHGSS 59
           +P   +L+   P      LPAP     LWP+    +     HLP +PG L + G      
Sbjct: 169 SPAGGILSFGKPDPLPTVLPAPVPGCSLWPEKAALKVLGKDHLPSSPGLL-MVGEDMQPK 227

Query: 60  GPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
            PA   +S S P R           L   P  LQ  PPL  + D   GP P
Sbjct: 228 DPAALGSSRSSPSRAASHS-SHKRKLSEPPLQLQPTPPLQLKWDRDEGPPP 277


>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
          regulator of chromatin a2 isoform a [Homo sapiens]
          Length = 1590

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 31 PDPEREGQP-PHLPPTPGSLGLPGSGHGSSGPAPPPASPSHP 71
          P P     P P L P+PG    PGS H   GP+P P S SHP
Sbjct: 15 PSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHP 56



 Score = 31.2 bits (69), Expect = 0.28
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 39  PPHLPPT-PGSLGLPGSGHGSSGP--APPPASPSHPHRLPLQPLGF 81
           PP +PP+ PG+L +PG     S P   P P SP   H+L  Q L +
Sbjct: 145 PPQMPPSQPGAL-IPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAY 189



 Score = 29.6 bits (65), Expect = 0.83
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 15/57 (26%)

Query: 31  PDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPAS---------PSHPHRLPLQP 78
           P PE  G     P TP  L +P  G G   PAPP A+         PS P   P QP
Sbjct: 265 PGPELSG-----PSTPQKLPVPAPG-GRPSPAPPAAAQPPAAAVPGPSVPQPAPGQP 315



 Score = 27.3 bits (59), Expect = 4.1
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)

Query: 41  HLPPTPGSLGLP---GSGHGSSGPAPPPASPSHPHRL 74
           ++ P P  LG P    S     GP PP   PS P  L
Sbjct: 120 YMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGAL 156



 Score = 26.2 bits (56), Expect = 9.2
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 34  EREGQPPHLPPTPGSLGLPGSG----HGSSGPAPPPASPSHPHRLPLQPLG 80
           +++ QP   PP P +           +  SGP P  + PS P +LP+   G
Sbjct: 234 QQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPG 284


>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
          regulator of chromatin a2 isoform b [Homo sapiens]
          Length = 1572

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 31 PDPEREGQP-PHLPPTPGSLGLPGSGHGSSGPAPPPASPSHP 71
          P P     P P L P+PG    PGS H   GP+P P S SHP
Sbjct: 15 PSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHP 56



 Score = 31.2 bits (69), Expect = 0.28
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 39  PPHLPPT-PGSLGLPGSGHGSSGP--APPPASPSHPHRLPLQPLGF 81
           PP +PP+ PG+L +PG     S P   P P SP   H+L  Q L +
Sbjct: 145 PPQMPPSQPGAL-IPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAY 189



 Score = 29.6 bits (65), Expect = 0.83
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 15/57 (26%)

Query: 31  PDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPAS---------PSHPHRLPLQP 78
           P PE  G     P TP  L +P  G G   PAPP A+         PS P   P QP
Sbjct: 265 PGPELSG-----PSTPQKLPVPAPG-GRPSPAPPAAAQPPAAAVPGPSVPQPAPGQP 315



 Score = 27.3 bits (59), Expect = 4.1
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)

Query: 41  HLPPTPGSLGLP---GSGHGSSGPAPPPASPSHPHRL 74
           ++ P P  LG P    S     GP PP   PS P  L
Sbjct: 120 YMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGAL 156



 Score = 26.2 bits (56), Expect = 9.2
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 34  EREGQPPHLPPTPGSLGLPGSG----HGSSGPAPPPASPSHPHRLPLQPLG 80
           +++ QP   PP P +           +  SGP P  + PS P +LP+   G
Sbjct: 234 QQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPG 284


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.138    0.475 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,392,165
Number of Sequences: 37866
Number of extensions: 723317
Number of successful extensions: 9941
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 999
Number of HSP's that attempted gapping in prelim test: 5565
Number of HSP's gapped (non-prelim): 4547
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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