Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239740906
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239740906 PREDICTED: hypothetical protein XP_002344082 [Homo
sapiens]
(138 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239740906 PREDICTED: hypothetical protein XP_002344082 [Homo ... 300 3e-82
gi|239740786 PREDICTED: hypothetical protein [Homo sapiens] 300 3e-82
gi|239740731 PREDICTED: hypothetical protein [Homo sapiens] 300 3e-82
gi|157168329 formin 1 [Homo sapiens] 45 1e-05
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 43 9e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 42 2e-04
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 41 4e-04
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 41 4e-04
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 40 5e-04
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 40 5e-04
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 40 5e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 40 6e-04
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 40 6e-04
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol... 40 6e-04
gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens] 39 0.001
gi|239741321 PREDICTED: hypothetical protein XP_002342193 [Homo ... 39 0.002
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 38 0.002
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 38 0.002
gi|11386183 WAS protein family, member 2 [Homo sapiens] 38 0.002
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 38 0.002
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 38 0.003
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 38 0.003
gi|239756026 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 37 0.004
gi|239752908 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho... 37 0.004
gi|239750549 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 37 0.004
gi|239747457 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho... 37 0.004
gi|239744846 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 37 0.004
gi|239741331 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho... 37 0.004
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 37 0.004
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 37 0.004
>gi|239740906 PREDICTED: hypothetical protein XP_002344082 [Homo
sapiens]
Length = 138
Score = 300 bits (767), Expect = 3e-82
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG
Sbjct: 1 MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
Query: 61 PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120
PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES
Sbjct: 61 PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120
Query: 121 PSSSLGDWELWLLAGVLV 138
PSSSLGDWELWLLAGVLV
Sbjct: 121 PSSSLGDWELWLLAGVLV 138
>gi|239740786 PREDICTED: hypothetical protein [Homo sapiens]
Length = 138
Score = 300 bits (767), Expect = 3e-82
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG
Sbjct: 1 MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
Query: 61 PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120
PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES
Sbjct: 61 PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120
Query: 121 PSSSLGDWELWLLAGVLV 138
PSSSLGDWELWLLAGVLV
Sbjct: 121 PSSSLGDWELWLLAGVLV 138
>gi|239740731 PREDICTED: hypothetical protein [Homo sapiens]
Length = 138
Score = 300 bits (767), Expect = 3e-82
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG
Sbjct: 1 MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
Query: 61 PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120
PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES
Sbjct: 61 PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120
Query: 121 PSSSLGDWELWLLAGVLV 138
PSSSLGDWELWLLAGVLV
Sbjct: 121 PSSSLGDWELWLLAGVLV 138
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 45.4 bits (106), Expect = 1e-05
Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Query: 13 PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPH 72
PV A LP P P P P G PP PP P LP S + PPPA P P
Sbjct: 673 PVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPP----LPNSPAPPNPGGPPPAPPP-PG 727
Query: 73 RLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDL 104
P P G L SS + R P + C +
Sbjct: 728 LAPPPPPGLFFGLGSSSSQCPRKPAIEPSCPM 759
Score = 32.0 bits (71), Expect = 0.17
Identities = 32/94 (34%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 10 AVAPVVASVYLPAPRAPFELW------PDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAP 63
A+ P AS+ P P P L P P PP PP P LP S+GP P
Sbjct: 644 ALPPPPASIP-PPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPP--SSAGPPP 700
Query: 64 PPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPP 97
PP P P+ P P P L PPP
Sbjct: 701 PPPPPPLPNS-PAPPNPGGPPPAPPPPGLAPPPP 733
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 42.7 bits (99), Expect = 9e-05
Identities = 33/89 (37%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 21 PAPRAPFELWPDPEREGQPP---HLPPTPGSLGLPGSGHGSSG--PAPPP-ASPSHPHRL 74
P P LWP+ E PP HL P SL P S G S PAPP SP+ P
Sbjct: 2130 PIPMGSPTLWPETEAHVSPPLDSHLGPARPSLDFPASAFGFSSLQPAPPQLPSPAEPRS- 2188
Query: 75 PLQPLGFLSFLVSSPTHLQRPPPLLSRCD 103
P G L+F L PP +R D
Sbjct: 2189 --APCGSLAFSGDRALALAPGPPTRTRHD 2215
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 41.6 bits (96), Expect = 2e-04
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Query: 13 PVVASVYLPAP---RAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPS 69
PVVA PAP AP P PP PPT G+ PGSG G + P PPPA S
Sbjct: 109 PVVAQGPGPAPGVGSAP------PASSSAPPATPPTSGAP--PGSGPGPT-PTPPPAVTS 159
Query: 70 HPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPR 111
P P P S + ++P PPP + G GP P+
Sbjct: 160 APPGAP-PPTPPSSGVPTTPPQAGGPPPPPAAVP-GPGPGPK 199
Score = 36.6 bits (83), Expect = 0.007
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 31 PDPEREGQPPHLPP-TPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLG 80
P P PP PP TP S G+P + + GP PPPA+ P P Q G
Sbjct: 153 PPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPG 203
Score = 32.7 bits (73), Expect = 0.098
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 14/67 (20%)
Query: 31 PDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPT 90
P P + G P +PP P P P PP PH+ P P P
Sbjct: 49 PGPGQSGPKPPIPPPP-----PHQQQQQPPPQQPPPQQPPPHQPPPHP---------QPH 94
Query: 91 HLQRPPP 97
Q+PPP
Sbjct: 95 QQQQPPP 101
Score = 28.9 bits (63), Expect = 1.4
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 8/59 (13%)
Query: 44 PTPG-----SLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPP 97
P PG + G G G G SGP PP P PH+ QP P H +PPP
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGP-KPPIPPPPPHQQQQQPPPQQPPPQQPPPH--QPPP 89
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 40.8 bits (94), Expect = 4e-04
Identities = 35/106 (33%), Positives = 38/106 (35%), Gaps = 26/106 (24%)
Query: 21 PAPRAPFELWPDPEREGQPPHLPPTPGSLGL----------PGSGHGSSGPAPPPASPSH 70
P P P L P E PP PP S+G P G G+ P PP P
Sbjct: 421 PPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPL 480
Query: 71 PHRLPLQPLGFLSFLVSSPTHL------QRPPPLLSRCDLGWGPTP 110
P G FL P L PPPLL +GWGP P
Sbjct: 481 P--------GSCEFLPPPPPPLPGLGCPPPPPPLLP--GMGWGPPP 516
Score = 33.1 bits (74), Expect = 0.075
Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 21/121 (17%)
Query: 3 PQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLP----PTPGSLGLPGSGHGS 58
P + L A+AP + P P + E P P PP LP P P LPG G G
Sbjct: 461 PPLPGLGAMAPPAPPLPPPLPGS-CEFLPPP-----PPPLPGLGCPPPPPPLLPGMGWGP 514
Query: 59 SGPAPP--PASPSHPHRLPLQPL-------GFLSFLVSSPTHLQRPPPLLSRCDLGWGPT 109
P PP P + S P ++ + G S V P+H + PP L L W
Sbjct: 515 PPPPPPLLPCTCSPPVAGGMEEVIVAQVDHGLGSAWV--PSHRRVNPPTLRMKKLNWQKL 572
Query: 110 P 110
P
Sbjct: 573 P 573
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 40.8 bits (94), Expect = 4e-04
Identities = 35/106 (33%), Positives = 38/106 (35%), Gaps = 26/106 (24%)
Query: 21 PAPRAPFELWPDPEREGQPPHLPPTPGSLGL----------PGSGHGSSGPAPPPASPSH 70
P P P L P E PP PP S+G P G G+ P PP P
Sbjct: 421 PPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPL 480
Query: 71 PHRLPLQPLGFLSFLVSSPTHL------QRPPPLLSRCDLGWGPTP 110
P G FL P L PPPLL +GWGP P
Sbjct: 481 P--------GSCEFLPPPPPPLPGLGCPPPPPPLLP--GMGWGPPP 516
Score = 33.1 bits (74), Expect = 0.075
Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 21/121 (17%)
Query: 3 PQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLP----PTPGSLGLPGSGHGS 58
P + L A+AP + P P + E P P PP LP P P LPG G G
Sbjct: 461 PPLPGLGAMAPPAPPLPPPLPGS-CEFLPPP-----PPPLPGLGCPPPPPPLLPGMGWGP 514
Query: 59 SGPAPP--PASPSHPHRLPLQPL-------GFLSFLVSSPTHLQRPPPLLSRCDLGWGPT 109
P PP P + S P ++ + G S V P+H + PP L L W
Sbjct: 515 PPPPPPLLPCTCSPPVAGGMEEVIVAQVDHGLGSAWV--PSHRRVNPPTLRMKKLNWQKL 572
Query: 110 P 110
P
Sbjct: 573 P 573
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 40.4 bits (93), Expect = 5e-04
Identities = 23/52 (44%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 21 PAPRAPFELWPDPEREGQPPHLPPTPGSLG-LPGSGHGSSGPAPPPASPSHP 71
P PR P P P R G PP PP G G LP G+ GP PP P P
Sbjct: 354 PTPRGP----PPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPP 401
Score = 35.8 bits (81), Expect = 0.012
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 21 PAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPS 69
PA L P P G PP PP P P SG +GPAPPP P+
Sbjct: 373 PATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSG---NGPAPPPLPPA 418
Score = 33.1 bits (74), Expect = 0.075
Identities = 24/68 (35%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
Query: 43 PPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRC 102
PP P G P G G P PPPA+ LP P G P PPP
Sbjct: 351 PPPPTPRGPPPPGRGGPPPPPPPAT-GRSGPLPPPPPG-----AGGPPMPPPPPPPPPPP 404
Query: 103 DLGWGPTP 110
G GP P
Sbjct: 405 SSGNGPAP 412
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 40.4 bits (93), Expect = 5e-04
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 26/91 (28%)
Query: 34 EREGQPPHLPPT---------PGSLGLPGSGHGSSGPA----------------PPPASP 68
+R PP PPT PGS PG+ G+S PA PPP P
Sbjct: 407 QRATPPPPPPPTYRTVVSSPGPGSGPGPGTTSGASSPARPATPLVPCRSTTPPPPPPRPP 466
Query: 69 SHPHRLPLQP-LGFLSFLVSSPTHLQRPPPL 98
S P P +P +G +S S P H PPP+
Sbjct: 467 SRPKLPPGKPGVGDVSRPFSPPIHSSSPPPI 497
Score = 27.3 bits (59), Expect = 4.1
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 33 PEREGQPPHLPPTPGSL-----GLPGSGHGSSGPAPPPASPSHPHRLPL 76
P R PP PP P S G PG G S +PP S S P PL
Sbjct: 452 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAPL 500
Score = 26.9 bits (58), Expect = 5.4
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
Query: 34 EREGQPPHLP------PTPGSLGLPGSGHGSSGPAPPPASPSHPHRL 74
E+ PP P P PG LG PG G GP PP + P L
Sbjct: 331 EKVVSPPATPDNPADSPAPGPLGPPGP-TGPPGPPGPPRNVLSPLNL 376
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 40.4 bits (93), Expect = 5e-04
Identities = 45/152 (29%), Positives = 58/152 (38%), Gaps = 37/152 (24%)
Query: 4 QVAVLAAVAPVVASVY--LPAPRAPFELWPDPERE-GQPPHLPPTPGSLGLPGSGHGSSG 60
++ +LA +P V SV +P P + P P G PP LPP P P S S G
Sbjct: 851 EMPLLARPSPPVQSVSPAVPTPPSMSAALPFPAGGLGMPPSLPPPPLQ---PPSLPLSMG 907
Query: 61 P---------APPPASPSHPHRLP-----LQPLGFLSFLVSSPTHLQRPP---------- 96
P AP P+ P +PH P L P + + +P PP
Sbjct: 908 PVLPDPFTHYAPLPSWPCYPHVSPSGYPCLPPPPTVPLVSGTPGAYAVPPTCSVPWAPPP 967
Query: 97 ----PLLSRCD---LGWGPTPRGQSWWRRESP 121
P S C LGWGP P+ +W P
Sbjct: 968 APVSPYSSTCTYGPLGWGPGPQHAPFWSTVPP 999
Score = 29.6 bits (65), Expect = 0.83
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 26/87 (29%)
Query: 21 PAPRAPFELW---PDPERE------GQPPHLPPT----PGSLGLPGSGHGSSGPA----- 62
P P P + P P+ E G P ++ P P SLGLPG G + P
Sbjct: 999 PPPLPPASIGRAVPQPKMESRGTPAGPPENVLPLSMAPPLSLGLPGHGAPQTEPTKVEVK 1058
Query: 63 PPPASPSHPHRLPLQPLGFLSFLVSSP 89
P PASP H+ +S LV SP
Sbjct: 1059 PVPASPHPKHK--------VSALVQSP 1077
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 40.0 bits (92), Expect = 6e-04
Identities = 28/69 (40%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 28 ELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVS 87
EL P +G PP LP PG+L G G P PPP+SP P R P S
Sbjct: 4276 ELGAGPRPQG-PPRLPAPPGALST-GPVLGPVHPTPPPSSPQEPKR----PSQLPSPSSQ 4329
Query: 88 SPTHLQRPP 96
PT Q PP
Sbjct: 4330 LPTEAQLPP 4338
Score = 32.0 bits (71), Expect = 0.17
Identities = 35/115 (30%), Positives = 40/115 (34%), Gaps = 22/115 (19%)
Query: 23 PRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFL 82
P AP P P G P PP G+ PG+G PP +P H P P FL
Sbjct: 2190 PTAPPTYPPYPSPTGAPAQ-PPMLGASSRPGAGQPGEFHTTPPGTPRHQ---PSTPDPFL 2245
Query: 83 SFLVSSPTHLQRP-----------PPLLSRCDLGWGPTPRGQSWWRRESPSSSLG 126
S +L P PLLS P P G+S E LG
Sbjct: 2246 KPRCPSLDNLAVPESPGVGGGKASEPLLS-------PPPFGESRKALEVKKEELG 2293
Score = 26.2 bits (56), Expect = 9.2
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 18/86 (20%)
Query: 19 YLPAPRAPFELWPDPER----EGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRL 74
+ P P L P+ R G PP P P + L S H P P P+ P L
Sbjct: 2906 FYPVSEDPHRLAPEGLRGLAVSGLPPQKPSAPPAPELNNSLH----PTPHTKGPTLPTGL 2961
Query: 75 PL--QPLGFLSFLVSSPTHLQRPPPL 98
L +P S T L RP PL
Sbjct: 2962 ELVNRP--------PSSTELGRPNPL 2979
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 40.0 bits (92), Expect = 6e-04
Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 21 PAPRAPFEL-WPDPEREGQPPHLPPTPGSLGLPGS--GHGSSGPAPPPASPSHPHRLPLQ 77
P PR P + P P G PP PP +G PG HG GP PP P H + P +
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGP--PPLMPPHGYTGPPR 390
Query: 78 --PLGFLSFLVSSPTHLQRPP 96
P G+ + P RPP
Sbjct: 391 PPPYGYQRGPLPPPRPTPRPP 411
Score = 38.1 bits (87), Expect = 0.002
Identities = 35/106 (33%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 13 PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAP-PPASPSHP 71
PV LP P P + P P G H PP+ G+ G GHG S P P PP HP
Sbjct: 246 PVPPPGALP-PGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHP 304
Query: 72 HRLPLQ-----PLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRG 112
+Q P G P +PPP GP P G
Sbjct: 305 GMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMG 350
Score = 29.6 bits (65), Expect = 0.83
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 21 PAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHP 71
P P AP + PP +PP PGS P G+ P PPA P P
Sbjct: 216 PPPSAPNPVVSSLGSGLPPPGMPP-PGSFPPPVPPPGALPPGIPPAMPPPP 265
Score = 28.9 bits (63), Expect = 1.4
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 33 PEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHL 92
P GQPP PP PG + PG P PP H P+ P G P H
Sbjct: 327 PGSGGQPPPRPP-PG-MPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHG 384
Query: 93 QRPPPLLSRCDLGWGPTP 110
PP GP P
Sbjct: 385 YTGPPRPPPYGYQRGPLP 402
>gi|47825361 non-specific cytotoxic cell receptor protein 1 homolog
[Homo sapiens]
Length = 275
Score = 40.0 bits (92), Expect = 6e-04
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 12/123 (9%)
Query: 23 PRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPS--HPHRLPLQPLG 80
P + EL P P PP PP P LP + P PA PS H +L L+ G
Sbjct: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEWG 78
Query: 81 FLSFLVSSPTHLQRPPPLLSR---CDLGWGPTPRGQSWWR-------RESPSSSLGDWEL 130
LS + P L LL R +L P P G + + + P +LG++
Sbjct: 79 PLSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPAPPTGPTQRPLETLGNFRG 138
Query: 131 WLL 133
W +
Sbjct: 139 WYI 141
>gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]
Length = 955
Score = 38.9 bits (89), Expect = 0.001
Identities = 39/135 (28%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 9 AAVAPVVASVYLPAPRAPFELWPDPEREG-QPPHLPPTPGSLGLPGSGHGSSGPAPPPAS 67
A +AP P L P+ R P H PP+ G PG G P +
Sbjct: 267 AVLAPSAILQPRQHPSKMLLLLPEAGRPALSPGHSPPS----GAPGPPAGVRTTRLPSPT 322
Query: 68 PSHPHRLPLQPLGFLSFLVSSPTHLQ------RPPPLLSRCDLGWGPTPRGQSWWRRESP 121
P P P P+ LS L+++P RPP LL +G +PRG ESP
Sbjct: 323 PRLPTSSPSAPVWLLSTLLATPVPTASLLGNLRPPSLLQGEVMGTPSSPRGP-----ESP 377
Query: 122 SSSLGDWELWLLAGV 136
+ G W L +
Sbjct: 378 RLAAGPSPCWHLGAM 392
Score = 28.5 bits (62), Expect = 1.8
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 16/57 (28%)
Query: 26 PFELWPDPEREGQPPHLPPTPGSLGLPGSG---HG--------SSGPAPPPASPSHP 71
P L P E++G PH G++ +G HG SS P PP ASPS P
Sbjct: 743 PDSLSPLEEKQGLSPH-----GNVAFSKAGRSLHGDTEAPVNCSSCPGPPTASPSRP 794
Score = 26.9 bits (58), Expect = 5.4
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 10/66 (15%)
Query: 33 PEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHL 92
P G P L P P + PG+ P P ASP P P+ P SF S +
Sbjct: 835 PGEPGASPRLSPGPSTP--PGA------PTLPLASPGAPQPPPVTP--ERSFSASGAQIV 884
Query: 93 QRPPPL 98
R PPL
Sbjct: 885 SRWPPL 890
>gi|239741321 PREDICTED: hypothetical protein XP_002342193 [Homo
sapiens]
Length = 123
Score = 38.5 bits (88), Expect = 0.002
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 23 PRAPFELWPDPEREGQPPHLPP--TPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLG 80
P AP + P+ PP + P PG L ++ PAP P + S P P
Sbjct: 24 PTAPLAILPNHSLPKIPPTVTPHDNPGRLS-------AAAPAPQPRALSPPRFCPPP--- 73
Query: 81 FLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQSWWRRES 120
LS L +SP L P L D G+ TP G + W+R S
Sbjct: 74 -LSSLCTSPPWLPLSPELT--VDAGFFRTPLGNTEWKRGS 110
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 13 PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPH 72
P+ S +P P P P G PP PP PG G+P GP PP P
Sbjct: 684 PLPGSAGIPPPPPPL-----PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG-MG 737
Query: 73 RLPLQPLGF 81
P P GF
Sbjct: 738 MPPPPPFGF 746
Score = 37.0 bits (84), Expect = 0.005
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 6 AVLAAVAPVVASVYLPAPRA---PFELWPDPEREGQ---PPHLPPTPGSLGLPGSG---H 56
A + P+ V +P+P + + P P G PP PP PGS G+P
Sbjct: 640 ATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLP 699
Query: 57 GSSG-PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPP 97
G +G P PPP P P P P + P + PPP
Sbjct: 700 GEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPP 741
Score = 32.3 bits (72), Expect = 0.13
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 13 PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGS--LGLPGSGHGSSGPAPPP----- 65
P + +P P AP + P PP PP PG + P S G + +PPP
Sbjct: 580 PGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGD 639
Query: 66 ASPSHPHRLPLQPLGFLS-FLVSSPTHLQRPPPLLSRCDLGWGPTP 110
A+ P LP + +G S + T + PPPL + P P
Sbjct: 640 ATIPPPPPLP-EGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPP 684
Score = 27.7 bits (60), Expect = 3.1
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 25/79 (31%)
Query: 39 PPHLP---PTPGSLGLPGSG----------HGSSGPAPPPASPSHPHRLPLQPLGFLSFL 85
PP +P P P + LPG S+ P PPP P P LP
Sbjct: 564 PPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLP------GGVC 617
Query: 86 VSSP------THLQRPPPL 98
+SSP T + PPPL
Sbjct: 618 ISSPPSLPGGTAISPPPPL 636
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 13 PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPH 72
P+ S +P P P P G PP PP PG G+P GP PP P
Sbjct: 693 PLPGSAGIPPPPPPL-----PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG-MG 746
Query: 73 RLPLQPLGF 81
P P GF
Sbjct: 747 MPPPPPFGF 755
Score = 37.0 bits (84), Expect = 0.005
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 6 AVLAAVAPVVASVYLPAPRA---PFELWPDPEREGQ---PPHLPPTPGSLGLPGSG---H 56
A + P+ V +P+P + + P P G PP PP PGS G+P
Sbjct: 649 ATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLP 708
Query: 57 GSSG-PAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPP 97
G +G P PPP P P P P + P + PPP
Sbjct: 709 GEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPP 750
Score = 32.3 bits (72), Expect = 0.13
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 13 PVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGS--LGLPGSGHGSSGPAPPP----- 65
P + +P P AP + P PP PP PG + P S G + +PPP
Sbjct: 589 PGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGD 648
Query: 66 ASPSHPHRLPLQPLGFLS-FLVSSPTHLQRPPPLLSRCDLGWGPTP 110
A+ P LP + +G S + T + PPPL + P P
Sbjct: 649 ATIPPPPPLP-EGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPP 693
Score = 27.7 bits (60), Expect = 3.1
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 25/79 (31%)
Query: 39 PPHLP---PTPGSLGLPGSG----------HGSSGPAPPPASPSHPHRLPLQPLGFLSFL 85
PP +P P P + LPG S+ P PPP P P LP
Sbjct: 573 PPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLP------GGVC 626
Query: 86 VSSP------THLQRPPPL 98
+SSP T + PPPL
Sbjct: 627 ISSPPSLPGGTAISPPPPL 645
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 15 VASVYLPAPRAPFELWPDPEREGQPPHLPPTPGS--LGLPGS----GHGSSGPAPPPASP 68
V S P P P P P+ PP PP P +G+P G GS G PPP+ P
Sbjct: 294 VVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPP 353
Query: 69 SHP 71
S P
Sbjct: 354 SFP 356
Score = 33.5 bits (75), Expect = 0.057
Identities = 36/124 (29%), Positives = 43/124 (34%), Gaps = 22/124 (17%)
Query: 3 PQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREG-----------QPPHLPPTPGSLGL 51
PQ ++ +P + LP P A F D +R P H PP P
Sbjct: 250 PQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSP 309
Query: 52 PGSGHGSSGPAPPPASPSHPHRL-----PLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGW 106
PG G APPPA P P + P P+GF S P PP D
Sbjct: 310 PGP---KPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPP---PSPPSFPPHPDFAA 363
Query: 107 GPTP 110
P P
Sbjct: 364 PPPP 367
Score = 32.3 bits (72), Expect = 0.13
Identities = 30/92 (32%), Positives = 35/92 (38%), Gaps = 26/92 (28%)
Query: 19 YLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPA-------------PPP 65
+ P P P P P G PP PP P G PG+ S P+ PPP
Sbjct: 316 FAPPPAPPP---PPPPMIGIPP--PPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPP 370
Query: 66 ASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPP 97
+ +P LP PL S PT PPP
Sbjct: 371 PAADYP-TLPPPPL-------SQPTGGAPPPP 394
Score = 32.0 bits (71), Expect = 0.17
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 9/78 (11%)
Query: 3 PQVAVLAAVAPV-VASVYLPAPRAPFELWPDPEREGQPPHLPPT--------PGSLGLPG 53
P + + PV S P P +P P P+ PP PP P L P
Sbjct: 328 PMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPT 387
Query: 54 SGHGSSGPAPPPASPSHP 71
G P PPP P P
Sbjct: 388 GGAPPPPPPPPPPGPPPP 405
Score = 26.9 bits (58), Expect = 5.4
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 6/53 (11%)
Query: 21 PAPRAPFELWPDPEREGQ------PPHLPPTPGSLGLPGSGHGSSGPAPPPAS 67
P P A + P P PP PP PG P +G PPP S
Sbjct: 369 PPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPPPLS 421
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 38.1 bits (87), Expect = 0.002
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 20 LPAPRAPFELWPDPEREGQP-PHLPP-TPGSLGLPGSG----HGSSGPAPPP 65
+P P P +L +P G+P P PP PG G PG G HG GPA PP
Sbjct: 66 MPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPP 117
Score = 30.4 bits (67), Expect = 0.49
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 8/41 (19%)
Query: 33 PEREGQPPHLPPTPGSLGLPG-----SGHGSSGPAPPPASP 68
P+ G PP LP GS GLPG G +GP PP P
Sbjct: 353 PQGLGGPPGLP---GSAGLPGRRGPPGPKGEAGPGGPPGVP 390
Score = 30.4 bits (67), Expect = 0.49
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 31 PDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHP 71
P R G+P PT G G+PGS G +GP PP P P
Sbjct: 492 PGEGRAGEPGTAGPT-GPPGVPGS-PGITGPPGPPGPPGPP 530
Score = 28.9 bits (63), Expect = 1.4
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 20 LPAPRAPFELWPDPEREGQPPHLPPTP-GSLGLPGSGHGSSGPAPPP 65
LP P+ P +P G P + PT G GLPG G GPA P
Sbjct: 288 LPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGP-KGDRGPAGVP 333
Score = 27.7 bits (60), Expect = 3.1
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Query: 39 PPHLPPTPGSLGLPGSGHGSSGPAPPPASP 68
PP +P +PG G P G GP PP +P
Sbjct: 508 PPGVPGSPGITGPP----GPPGPPGPPGAP 533
Score = 27.3 bits (59), Expect = 4.1
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 7/40 (17%)
Query: 39 PPHLPPTPGSLGLPG-------SGHGSSGPAPPPASPSHP 71
P LP G GLPG G++GP PP P P
Sbjct: 476 PQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSP 515
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 37.7 bits (86), Expect = 0.003
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 18 VYLPAPRAPFELWPDPERE--GQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLP 75
+Y PAP+ P P+ P + P G+ G PGS PP S SHPH P
Sbjct: 1370 LYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGS-------RPPGGSYSHPHH-P 1421
Query: 76 LQPLGFLSFLVSSPTHLQRPPP 97
PL S + P++ PPP
Sbjct: 1422 QSPLSPHSPIPPHPSYPPLPPP 1443
Score = 32.3 bits (72), Expect = 0.13
Identities = 23/57 (40%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Query: 40 PHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPP 96
PH P +P S P H S P PPP SP PH PL P P H PP
Sbjct: 1418 PHHPQSPLSPHSPIPPHPSYPPLPPP-SPHTPHS-PLPPTS-----PHGPLHASGPP 1467
Score = 28.9 bits (63), Expect = 1.4
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 22 APRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHRLP 75
+P +P P P PP P TP S P S HG + PP + + P P
Sbjct: 1426 SPHSPIP--PHPSYPPLPPPSPHTPHSPLPPTSPHGPLHASGPPGTANPPSANP 1477
Score = 27.7 bits (60), Expect = 3.1
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 7/53 (13%)
Query: 21 PAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPASPSHPHR 73
P P P L P PP PP L GS P P A P PHR
Sbjct: 1275 PGPAPPPYLPPQQPSLPPPPQQPPPLPQL-------GSIPPPPASAPPVGPHR 1320
Score = 26.2 bits (56), Expect = 9.2
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 14/39 (35%)
Query: 60 GPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPL 98
GPAPPP P P QP S P Q+PPPL
Sbjct: 1276 GPAPPPYLP------PQQP--------SLPPPPQQPPPL 1300
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 37.7 bits (86), Expect = 0.003
Identities = 33/105 (31%), Positives = 41/105 (39%), Gaps = 14/105 (13%)
Query: 13 PVVASVYLPAPRAPFELWPDPEREGQPP---HLPPTPGSLGLPGSGHGSSGPAPPPASPS 69
P A LP P++P+ P P GQPP H PG P H + P P P P
Sbjct: 985 PPQAPGLLP-PQSPYPYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQ 1043
Query: 70 HPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTPRGQS 114
PH PL + + P Q P + GP+ GQS
Sbjct: 1044 PPH----PPLAYGPAPSTRPMGPQAAPLTIR------GPSSAGQS 1078
Score = 30.8 bits (68), Expect = 0.37
Identities = 31/101 (30%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 12 APVVASVYLPAPRAPFELWPDPEREGQPPHLPPTP-GSLGLPGSGHGSSGPAPPPAS-PS 69
AP + P P +L+P P ++ P H P S G P H P P++ P
Sbjct: 1001 APQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQPPHPPLAYGPAPSTRPM 1060
Query: 70 HPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
P PL G S S+P+ P P S G GP P
Sbjct: 1061 GPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSP---GPGPVP 1098
Score = 29.3 bits (64), Expect = 1.1
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 12/51 (23%)
Query: 39 PPHLPPTPGSLGLPGSGHGSSGPAPP-----------PASPSHPHRLPLQP 78
P H PP+P H SGP PP P +P PH +P+ P
Sbjct: 768 PLHFPPSPFPSSTGPGPHYLSGPLPPGTYSGPTQLIQPRAPG-PHAMPVAP 817
Score = 26.6 bits (57), Expect = 7.0
Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 21/68 (30%)
Query: 1 MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
M PQ A L P A P+ PHL P+P P G G
Sbjct: 1060 MGPQAAPLTIRGPSSAGQSTPS-----------------PHLVPSPA----PSPGPGPVP 1098
Query: 61 PAPPPASP 68
P PP A P
Sbjct: 1099 PRPPAAEP 1106
>gi|239756026 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 37.4 bits (85), Expect = 0.004
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 18/118 (15%)
Query: 2 TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGL-------P 52
+P +L P LPAP LWP+ + +LP +PG L +
Sbjct: 169 SPAGGILPFGRPDPLPTVLPAPVPGCSLWPEKAALKVLGKDYLPSSPGLLMVGEDMQPKD 228
Query: 53 GSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
+ GSS +PP A+ H+ L P LQ PPL R D GP P
Sbjct: 229 PAALGSSRSSPPKAAGHRSHKRKLS---------GPPLQLQPTPPLQLRWDRDEGPPP 277
>gi|239752908 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
sapiens]
Length = 341
Score = 37.4 bits (85), Expect = 0.004
Identities = 34/111 (30%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Query: 2 TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGLPGSGHGSS 59
+P +L+ P LPAP LWP+ + HLP +PG L + G
Sbjct: 169 SPAGGILSFGKPDPLPTVLPAPVPGCSLWPEKAALKVLGKDHLPSSPGLL-MVGEDMQPK 227
Query: 60 GPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
PA +S S P R L P LQ PPL + D GP P
Sbjct: 228 DPAALGSSRSSPSRAASHS-SHKRKLSEPPLQLQPTPPLQLKWDRDEGPPP 277
>gi|239750549 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 37.4 bits (85), Expect = 0.004
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 18/118 (15%)
Query: 2 TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGL-------P 52
+P +L P LPAP LWP+ + +LP +PG L +
Sbjct: 169 SPAGGILPFGRPDPLPTVLPAPVPGCSLWPEKAALKVLGKDYLPSSPGLLMVGEDMQPKD 228
Query: 53 GSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
+ GSS +PP A+ H+ L P LQ PPL R D GP P
Sbjct: 229 PAALGSSRSSPPKAAGHRSHKRKLS---------GPPLQLQPTPPLQLRWDRDEGPPP 277
>gi|239747457 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
sapiens]
Length = 341
Score = 37.4 bits (85), Expect = 0.004
Identities = 34/111 (30%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Query: 2 TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGLPGSGHGSS 59
+P +L+ P LPAP LWP+ + HLP +PG L + G
Sbjct: 169 SPAGGILSFGKPDPLPTVLPAPVPGCSLWPEKAALKVLGKDHLPSSPGLL-MVGEDMQPK 227
Query: 60 GPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
PA +S S P R L P LQ PPL + D GP P
Sbjct: 228 DPAALGSSRSSPSRAASHS-SHKRKLSEPPLQLQPTPPLQLKWDRDEGPPP 277
>gi|239744846 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 37.4 bits (85), Expect = 0.004
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 18/118 (15%)
Query: 2 TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGL-------P 52
+P +L P LPAP LWP+ + +LP +PG L +
Sbjct: 169 SPAGGILPFGRPDSLPTVLPAPVPGCSLWPEKAALKVLGKDYLPSSPGLLMVGEDMQPKD 228
Query: 53 GSGHGSSGPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
+ GSS +PP A+ H+ L P LQ PPL R D GP P
Sbjct: 229 PAALGSSRSSPPKAAGHRSHKRKLS---------GPPLQLQPTPPLQLRWDRDEGPPP 277
>gi|239741331 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
sapiens]
Length = 341
Score = 37.4 bits (85), Expect = 0.004
Identities = 34/111 (30%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Query: 2 TPQVAVLAAVAPVVASVYLPAPRAPFELWPDPE--REGQPPHLPPTPGSLGLPGSGHGSS 59
+P +L+ P LPAP LWP+ + HLP +PG L + G
Sbjct: 169 SPAGGILSFGKPDPLPTVLPAPVPGCSLWPEKAALKVLGKDHLPSSPGLL-MVGEDMQPK 227
Query: 60 GPAPPPASPSHPHRLPLQPLGFLSFLVSSPTHLQRPPPLLSRCDLGWGPTP 110
PA +S S P R L P LQ PPL + D GP P
Sbjct: 228 DPAALGSSRSSPSRAASHS-SHKRKLSEPPLQLQPTPPLQLKWDRDEGPPP 277
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 37.4 bits (85), Expect = 0.004
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 31 PDPEREGQP-PHLPPTPGSLGLPGSGHGSSGPAPPPASPSHP 71
P P P P L P+PG PGS H GP+P P S SHP
Sbjct: 15 PSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHP 56
Score = 31.2 bits (69), Expect = 0.28
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 39 PPHLPPT-PGSLGLPGSGHGSSGP--APPPASPSHPHRLPLQPLGF 81
PP +PP+ PG+L +PG S P P P SP H+L Q L +
Sbjct: 145 PPQMPPSQPGAL-IPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAY 189
Score = 29.6 bits (65), Expect = 0.83
Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 15/57 (26%)
Query: 31 PDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPAS---------PSHPHRLPLQP 78
P PE G P TP L +P G G PAPP A+ PS P P QP
Sbjct: 265 PGPELSG-----PSTPQKLPVPAPG-GRPSPAPPAAAQPPAAAVPGPSVPQPAPGQP 315
Score = 27.3 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 41 HLPPTPGSLGLP---GSGHGSSGPAPPPASPSHPHRL 74
++ P P LG P S GP PP PS P L
Sbjct: 120 YMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGAL 156
Score = 26.2 bits (56), Expect = 9.2
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 34 EREGQPPHLPPTPGSLGLPGSG----HGSSGPAPPPASPSHPHRLPLQPLG 80
+++ QP PP P + + SGP P + PS P +LP+ G
Sbjct: 234 QQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPG 284
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 37.4 bits (85), Expect = 0.004
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 31 PDPEREGQP-PHLPPTPGSLGLPGSGHGSSGPAPPPASPSHP 71
P P P P L P+PG PGS H GP+P P S SHP
Sbjct: 15 PSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHP 56
Score = 31.2 bits (69), Expect = 0.28
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 39 PPHLPPT-PGSLGLPGSGHGSSGP--APPPASPSHPHRLPLQPLGF 81
PP +PP+ PG+L +PG S P P P SP H+L Q L +
Sbjct: 145 PPQMPPSQPGAL-IPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAY 189
Score = 29.6 bits (65), Expect = 0.83
Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 15/57 (26%)
Query: 31 PDPEREGQPPHLPPTPGSLGLPGSGHGSSGPAPPPAS---------PSHPHRLPLQP 78
P PE G P TP L +P G G PAPP A+ PS P P QP
Sbjct: 265 PGPELSG-----PSTPQKLPVPAPG-GRPSPAPPAAAQPPAAAVPGPSVPQPAPGQP 315
Score = 27.3 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 41 HLPPTPGSLGLP---GSGHGSSGPAPPPASPSHPHRL 74
++ P P LG P S GP PP PS P L
Sbjct: 120 YMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGAL 156
Score = 26.2 bits (56), Expect = 9.2
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 34 EREGQPPHLPPTPGSLGLPGSG----HGSSGPAPPPASPSHPHRLPLQPLG 80
+++ QP PP P + + SGP P + PS P +LP+ G
Sbjct: 234 QQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPG 284
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.138 0.475
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,392,165
Number of Sequences: 37866
Number of extensions: 723317
Number of successful extensions: 9941
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 999
Number of HSP's that attempted gapping in prelim test: 5565
Number of HSP's gapped (non-prelim): 4547
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.