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Search of human proteins with 239509017
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239509017 PREDICTED: hypothetical protein, partial [Homo
sapiens]
(90 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239509017 PREDICTED: hypothetical protein, partial [Homo sapi... 172 4e-44
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 68 1e-12
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 61 2e-10
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens] 60 4e-10
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] 60 4e-10
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens] 60 4e-10
gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ... 57 2e-09
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 55 9e-09
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 55 1e-08
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 55 2e-08
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 54 2e-08
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens] 54 3e-08
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 54 3e-08
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 53 6e-08
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 53 6e-08
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 53 6e-08
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 53 6e-08
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 52 1e-07
gi|52426743 cisplatin resistance-associated overexpressed protei... 51 2e-07
gi|19923485 cisplatin resistance-associated overexpressed protei... 51 2e-07
gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo sapi... 50 3e-07
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 50 3e-07
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 50 3e-07
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 50 4e-07
gi|24307919 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Ho... 50 4e-07
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 50 5e-07
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 49 6e-07
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 49 6e-07
gi|34878777 ring finger protein 20 [Homo sapiens] 49 8e-07
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 49 8e-07
>gi|239509017 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 90
Score = 172 bits (437), Expect = 4e-44
Identities = 90/90 (100%), Positives = 90/90 (100%)
Query: 1 MQRGEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR 60
MQRGEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR
Sbjct: 1 MQRGEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR 60
Query: 61 RRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
RRRRRRREEKKKQKKKKRREEEEAEEEEKK
Sbjct: 61 RRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
Length = 360
Score = 68.2 bits (165), Expect = 1e-12
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 9 SAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRRE 68
++PS C T ++K RR+RSSSSSSSSSSSSSSS R++R + + +RR+
Sbjct: 177 ASPSPCITERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRK 236
Query: 69 EKKKQKKKKRREEEEAEEEE 88
+KKK+KK K++ +E+AE ++
Sbjct: 237 KKKKRKKLKKKGKEKAEAQQ 256
Score = 29.3 bits (64), Expect = 0.69
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 4 GEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRR 63
G A+ S P++ PE + S +R R+R R R R R
Sbjct: 81 GAALPSRPASRAAPRPEASSPPLPLEKARGGLSGPQGGRARGAMAHVGSRKRSRSRSRSR 140
Query: 64 RRRREEKKKQKKK 76
R E++KK+ +K
Sbjct: 141 GRGSEKRKKKSRK 153
Score = 27.3 bits (59), Expect = 2.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 54 RRRRRRRRRRRRRREEKKKQKKKK 77
R+R R R R R R EK+K+K +K
Sbjct: 130 RKRSRSRSRSRGRGSEKRKKKSRK 153
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 61.2 bits (147), Expect = 2e-10
Identities = 24/71 (33%), Positives = 45/71 (63%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+KK ER+ R R ++RR R+R++RR+++RR+ R+ EK++ K++++R
Sbjct: 101 KKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKR 160
Query: 80 EEEEAEEEEKK 90
++ + EE EKK
Sbjct: 161 KKRKKEEREKK 171
Score = 56.6 bits (135), Expect = 4e-09
Identities = 21/70 (30%), Positives = 43/70 (61%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
K+ RR R + RR R+R++RR+++RR+ R+R + R ++++++KK+++E
Sbjct: 107 KQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKE 166
Query: 81 EEEAEEEEKK 90
E E + E +
Sbjct: 167 EREKKRERNR 176
Score = 55.1 bits (131), Expect = 1e-08
Identities = 21/70 (30%), Positives = 42/70 (60%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++++ERR + +R RR R++++ R+ R R ++RRE K+K+++KK+R
Sbjct: 84 KQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKR 143
Query: 80 EEEEAEEEEK 89
+E E+E+
Sbjct: 144 RKERKREKER 153
Score = 55.1 bits (131), Expect = 1e-08
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++KE R R RR R++++ R+ R R ++RR ++KK++KKKRR
Sbjct: 85 QRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRR 144
Query: 80 EEEEAEEEEKK 90
+E + E+E K
Sbjct: 145 KERKREKERGK 155
Score = 55.1 bits (131), Expect = 1e-08
Identities = 22/72 (30%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRR-RRRRRRRRREEKKKQKKKKR 78
+KK+ER+ R + R+++RR+ R+R + R +R R+R++R++++++KK++R
Sbjct: 115 KKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRER 174
Query: 79 REEEEAEEEEKK 90
+E +E E+K
Sbjct: 175 NRKERKKERERK 186
Score = 54.7 bits (130), Expect = 2e-08
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRR-REEKKKQKKKKR 78
+KK ++R R + RR + RR+R++ +++R R++R R E+KK+K++K
Sbjct: 63 KKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKE 122
Query: 79 REEEEAEEEEKK 90
RE E + E+K
Sbjct: 123 RERENKQRRERK 134
Score = 54.7 bits (130), Expect = 2e-08
Identities = 20/70 (28%), Positives = 41/70 (58%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+KE R+ + R++++ R+ R R ++RR R+R++ KKK++K+++RE
Sbjct: 91 EKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKRE 150
Query: 81 EEEAEEEEKK 90
+E + E K+
Sbjct: 151 KERGKRERKR 160
Score = 54.3 bits (129), Expect = 2e-08
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+ +R R R+R+ R ++R+ RR + RR+R++EKKK+++K+R
Sbjct: 51 EKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRG 110
Query: 80 EEEEAEEEEKK 90
E +++E+K
Sbjct: 111 RRERKKKKERK 121
Score = 53.9 bits (128), Expect = 3e-08
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++K+ R + RR + RR+R++ +++R R++R RRE KKK+++K+R
Sbjct: 65 KRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERE 124
Query: 80 EEEEAEEEEKK 90
E + E K+
Sbjct: 125 RENKQRRERKR 135
Score = 53.9 bits (128), Expect = 3e-08
Identities = 20/70 (28%), Positives = 42/70 (60%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+++ERR R R++++ R+ R R ++RR R+R++ +KK+++K+R+
Sbjct: 90 REKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKR 149
Query: 81 EEEAEEEEKK 90
E+E + E+K
Sbjct: 150 EKERGKRERK 159
Score = 53.9 bits (128), Expect = 3e-08
Identities = 22/70 (31%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+ ER+ + + R+R++RR+++RR+ R+R + R +RE K+K++KK+ RE+
Sbjct: 111 RRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREK 170
Query: 82 E-EAEEEEKK 90
+ E +E+K
Sbjct: 171 KRERNRKERK 180
Score = 53.5 bits (127), Expect = 3e-08
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 14 CFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQ 73
C E+K+ERR R R R ++ +++R++R R + R R+R+E++KQ
Sbjct: 29 CTQRESERKKERRER---EKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQ 85
Query: 74 KKKKRREEEEAEEEEKK 90
+K++R +E ++EKK
Sbjct: 86 RKERREKERRKRKKEKK 102
Score = 53.5 bits (127), Expect = 3e-08
Identities = 19/71 (26%), Positives = 44/71 (61%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++K++R+ R +R+ RR + RR+R++ +++R R++ ++++KKKK R
Sbjct: 61 KEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKER 120
Query: 80 EEEEAEEEEKK 90
+E E E ++++
Sbjct: 121 KERERENKQRR 131
Score = 53.1 bits (126), Expect = 4e-08
Identities = 20/70 (28%), Positives = 40/70 (57%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+K+ + R R + R ++R R R+ R++ R R+ R E+KK++KK+RR
Sbjct: 141 KKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERR 200
Query: 80 EEEEAEEEEK 89
+++E +++ K
Sbjct: 201 KKKERKKDRK 210
Score = 52.8 bits (125), Expect = 6e-08
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++K ER R R + R R+R+ R ++R+ RR +E +K++K+KK+R
Sbjct: 45 KRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKR 104
Query: 80 EEEEAEEEEKK 90
E ++ E+K
Sbjct: 105 ERKQRGRRERK 115
Score = 52.8 bits (125), Expect = 6e-08
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
KK ER R + RR+R++ +++R R++R RR +KKK++K++ RE
Sbjct: 67 KKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERE 126
Query: 81 EEEAEEEEKK 90
++ E ++K
Sbjct: 127 NKQRRERKRK 136
Score = 52.0 bits (123), Expect = 1e-07
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRR--RRRRRREEKKKQKKKKR 78
+KE +R R R R+R+ R ++R+ RR RR+R++E+KK+++K++
Sbjct: 51 EKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRG 110
Query: 79 REEEEAEEEEKK 90
R E + ++E K+
Sbjct: 111 RRERKKKKERKE 122
Score = 52.0 bits (123), Expect = 1e-07
Identities = 19/71 (26%), Positives = 43/71 (60%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+K ER + R+R+ R ++R+ RR + RR+R++ ++K+++K++ RR
Sbjct: 53 ERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRR 112
Query: 80 EEEEAEEEEKK 90
E ++ +E +++
Sbjct: 113 ERKKKKERKER 123
Score = 52.0 bits (123), Expect = 1e-07
Identities = 18/70 (25%), Positives = 43/70 (61%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
KKE+++ + ++R+ RR + RR+R++ +++R R+++ ++++KK++E
Sbjct: 60 KKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKE 119
Query: 81 EEEAEEEEKK 90
+E E E K+
Sbjct: 120 RKERERENKQ 129
Score = 52.0 bits (123), Expect = 1e-07
Identities = 18/71 (25%), Positives = 42/71 (59%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+++E +R + R +R R+R++R++ R ++R R R+E+KK++++K R
Sbjct: 129 QRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKER 188
Query: 80 EEEEAEEEEKK 90
E + E ++++
Sbjct: 189 RERKKERKKER 199
Score = 52.0 bits (123), Expect = 1e-07
Identities = 18/71 (25%), Positives = 43/71 (60%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+K+ +++ R R++R++ R ++R R R+ R++ RE K+++++KK R
Sbjct: 136 KKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKER 195
Query: 80 EEEEAEEEEKK 90
++E +++E+K
Sbjct: 196 KKERRKKKERK 206
Score = 51.6 bits (122), Expect = 1e-07
Identities = 19/69 (27%), Positives = 40/69 (57%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
KE R R R+R++ +++R R++R RR R++++E K+++++ K+R E
Sbjct: 73 KERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRE 132
Query: 82 EEAEEEEKK 90
+ ++ KK
Sbjct: 133 RKRKKRRKK 141
Score = 51.6 bits (122), Expect = 1e-07
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+KE R RR+ R+R + R +R R+R++R++ E +KK+++ ++
Sbjct: 119 ERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKE 178
Query: 80 EEEEAEEEEKK 90
++E E +E++
Sbjct: 179 RKKERERKERR 189
Score = 51.2 bits (121), Expect = 2e-07
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 33 SSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
S S S + R R++ RR R +R+R R + R+ E+ K++KKKR++ E +E E+K
Sbjct: 21 SCSHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERK 78
Score = 51.2 bits (121), Expect = 2e-07
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 30 SSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEEEK 89
S S + S ++ RR R +R+R R + R+R R ++EKKK+KK++R +E E + +E+
Sbjct: 23 SHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKER 82
Query: 90 K 90
+
Sbjct: 83 E 83
Score = 51.2 bits (121), Expect = 2e-07
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+ +R + ++++ R+ R R ++RR R+R++R +KK++K++KR
Sbjct: 91 EKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKRE 150
Query: 80 EEEEAEEEEKK 90
+E E ++K
Sbjct: 151 KERGKRERKRK 161
Score = 51.2 bits (121), Expect = 2e-07
Identities = 18/71 (25%), Positives = 42/71 (59%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+K ++R + R R+R++R++ R ++R R R+ R++++++K+++ R
Sbjct: 132 ERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRER 191
Query: 80 EEEEAEEEEKK 90
++E +E KK
Sbjct: 192 KKERKKERRKK 202
Score = 50.8 bits (120), Expect = 2e-07
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 30 SSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEEEK 89
S S S + S R++ RR R +R+R R + R+R R +K+K+K+KKR +E E + K
Sbjct: 21 SCSHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRK 80
Query: 90 K 90
+
Sbjct: 81 E 81
Score = 50.8 bits (120), Expect = 2e-07
Identities = 16/69 (23%), Positives = 43/69 (62%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++ E+R R ++R++R R + R R+R+ R ++R+E ++K+++K+++E
Sbjct: 41 REREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKE 100
Query: 81 EEEAEEEEK 89
+++ E +++
Sbjct: 101 KKKRERKQR 109
Score = 50.8 bits (120), Expect = 2e-07
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEK-----KKQK 74
E+++ +R R R++R R + R R+R+ R ++R+ R EK KK+K
Sbjct: 42 EREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEK 101
Query: 75 KKKRREEEEAEEEEKK 90
KK+ R++ E +KK
Sbjct: 102 KKRERKQRGRRERKKK 117
Score = 50.8 bits (120), Expect = 2e-07
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++E+ R R + R R+R+ R ++R+ RR + RR+ KK++KK++R++
Sbjct: 49 EREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQ 108
Query: 81 EEEAEEEEKK 90
E ++KK
Sbjct: 109 RGRRERKKKK 118
Score = 50.8 bits (120), Expect = 2e-07
Identities = 18/71 (25%), Positives = 41/71 (57%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EKK+ ++ R+ RR + RR+R++ +++R R++R ++++KKK+R+
Sbjct: 62 EKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERK 121
Query: 80 EEEEAEEEEKK 90
E E ++ ++
Sbjct: 122 ERERENKQRRE 132
Score = 50.8 bits (120), Expect = 2e-07
Identities = 17/70 (24%), Positives = 43/70 (61%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
K+++RR + R+R++R++ R ++R R R+ R++E++++++++R++
Sbjct: 134 KRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKK 193
Query: 81 EEEAEEEEKK 90
E + E +KK
Sbjct: 194 ERKKERRKKK 203
Score = 50.4 bits (119), Expect = 3e-07
Identities = 18/70 (25%), Positives = 42/70 (60%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++ +R+ R +R R+R++R++ R ++R R R+E KK++++K+RRE
Sbjct: 131 RERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRE 190
Query: 81 EEEAEEEEKK 90
++ ++E++
Sbjct: 191 RKKERKKERR 200
Score = 50.1 bits (118), Expect = 4e-07
Identities = 19/71 (26%), Positives = 41/71 (57%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+K+E + R + RR+R++ +++R R++R RR R++KK++K+++R
Sbjct: 67 KKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERE 126
Query: 80 EEEEAEEEEKK 90
++ E + KK
Sbjct: 127 NKQRRERKRKK 137
Score = 49.7 bits (117), Expect = 5e-07
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+K E+ ++R R R+ R++ R R+ RR R++E KK+++KKK R
Sbjct: 146 ERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKER 205
Query: 80 EEEEAEEEE 88
+++ + +
Sbjct: 206 KKDRKTDRQ 214
Score = 49.3 bits (116), Expect = 6e-07
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+ +R R R R+ R++ R R+ RR R++ R++E +KK+++KK R
Sbjct: 150 EKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDR 209
Query: 80 EEEEAEEEE 88
+ + + +
Sbjct: 210 KTDRQTDSQ 218
Score = 48.9 bits (115), Expect = 8e-07
Identities = 17/71 (23%), Positives = 43/71 (60%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+++E++R R R++R RR R++++ R+ R R ++++++K+KKRR
Sbjct: 80 KEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRR 139
Query: 80 EEEEAEEEEKK 90
+++ +E +++
Sbjct: 140 KKKRRKERKRE 150
Score = 48.9 bits (115), Expect = 8e-07
Identities = 17/69 (24%), Positives = 40/69 (57%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+K++RR +R++ R ++R R R+ R++ R R+E++++KK++++E
Sbjct: 139 RKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKE 198
Query: 81 EEEAEEEEK 89
+ +E +K
Sbjct: 199 RRKKKERKK 207
Score = 48.5 bits (114), Expect = 1e-06
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 27 SRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEE 86
S S S + S + RR R +R+R R + R+R R ++E+KK++K+++ +E E +
Sbjct: 21 SCSHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRK 80
Query: 87 EEKK 90
E +K
Sbjct: 81 EREK 84
Score = 46.6 bits (109), Expect = 4e-06
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 27 SRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEE 86
S S + S RR R +R+R R + R+R R ++ ++++KK+++ K RE + E
Sbjct: 23 SHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKER 82
Query: 87 EEKK 90
E+++
Sbjct: 83 EKQR 86
Score = 44.7 bits (104), Expect = 2e-05
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 27 SRSSSSSSSSSSSSSSSRRRRRRRRRRRRRR---------RRRRRRRRRREEKKKQKKKK 77
S+ + S R +R+R R + R+R R++R R + RE K+K+++K+
Sbjct: 26 SKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQ 85
Query: 78 RREEEEAEEEEKK 90
R+E E E ++K
Sbjct: 86 RKERREKERRKRK 98
Score = 38.5 bits (88), Expect = 0.001
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
KKEER + + RR R++ R++ RR+++ R++ R+ +++ + R
Sbjct: 164 KKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQVFRPL 223
Query: 81 EEEA 84
E A
Sbjct: 224 RESA 227
Score = 34.3 bits (77), Expect = 0.022
Identities = 13/65 (20%), Positives = 33/65 (50%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++K+E R + + + RR R++ R++ RR+++ R++ R+ ++ + R
Sbjct: 162 KRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQVFR 221
Query: 80 EEEEA 84
E+
Sbjct: 222 PLRES 226
>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
Length = 338
Score = 60.1 bits (144), Expect = 4e-10
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++K RR+RSSSSSSSSSSSSSSS R++R + + +RR++KKK+KK K++
Sbjct: 169 KQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKK 228
Query: 80 EEEEAEEEE 88
+E+AE ++
Sbjct: 229 GKEKAEAQQ 237
Score = 56.2 bits (134), Expect = 5e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+ RS SSSSSSSSSSSSSSS R++R + + +RR++++K+K+ KKK +E+
Sbjct: 173 RRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEK 232
Query: 82 EEAEEEE 88
EA++ E
Sbjct: 233 AEAQQVE 239
Score = 51.2 bits (121), Expect = 2e-07
Identities = 26/64 (40%), Positives = 44/64 (68%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T S SSSSSSSSSSSSSSS R++R + + +RR+++++R++ ++K K+K +
Sbjct: 176 TRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEA 235
Query: 78 RREE 81
++ E
Sbjct: 236 QQVE 239
Score = 49.7 bits (117), Expect = 5e-07
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 16 TLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKK 75
T + S SSSSSSSSSSSSSS R++R + + +RR+++++R++ KKK K+
Sbjct: 176 TRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKL----KKKGKE 231
Query: 76 KKRREEEEA 84
K ++ EA
Sbjct: 232 KAEAQQVEA 240
Score = 29.6 bits (65), Expect = 0.53
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 4 GEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRR 63
G A+ S P++ PE + S +R R+R R R R R
Sbjct: 81 GAALPSRPASRAAPRPEASSPPLPLEKARGGLSGPQGGRARGAMAHVGSRKRSRSRSRSR 140
Query: 64 RRRREEKKKQKKKKRREEEEAEEEEKK 90
R E++KK+ +K A +++
Sbjct: 141 GRGSEKRKKKSRKDTSRNCSASTSQER 167
>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
Length = 352
Score = 60.1 bits (144), Expect = 4e-10
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++K RR+RSSSSSSSSSSSSSSS R++R + + +RR++KKK+KK K++
Sbjct: 180 KQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKK 239
Query: 80 EEEEAEEEE 88
+E+AE ++
Sbjct: 240 GKEKAEAQQ 248
Score = 58.9 bits (141), Expect = 8e-10
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 3 RGEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRR 62
+G ++AP + + RS SSSSSSSSSSSSSSS R++R + +
Sbjct: 165 QGRKASTAPGAEERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKD 224
Query: 63 RRRRREEKKKQKKKKRREEEEAEEEE 88
+RR++++K+K+ KKK +E+ EA++ E
Sbjct: 225 KRRKKKKKRKKLKKKGKEKAEAQQVE 250
Score = 29.3 bits (64), Expect = 0.69
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 4 GEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRR 63
G A+ S P++ PE + S +R R+R R R R R
Sbjct: 81 GAALPSRPASRAAPRPEASSPPLPLEKARGGLSGPQGGRARGAMAHVGSRKRSRSRSRSR 140
Query: 64 RRRREEKKKQKKK 76
R E++KK+ +K
Sbjct: 141 GRGSEKRKKKSRK 153
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKR 78
++ RSRS S S SR+ R + R+ EE+ KQK ++R
Sbjct: 130 RKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEERSKQKARRR 186
>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
Length = 341
Score = 60.1 bits (144), Expect = 4e-10
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++K RR+RSSSSSSSSSSSSSSS R++R + + +RR++KKK+KK K++
Sbjct: 169 KQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKK 228
Query: 80 EEEEAEEEE 88
+E+AE ++
Sbjct: 229 GKEKAEAQQ 237
Score = 56.2 bits (134), Expect = 5e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+ RS SSSSSSSSSSSSSSS R++R + + +RR++++K+K+ KKK +E+
Sbjct: 173 RRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEK 232
Query: 82 EEAEEEE 88
EA++ E
Sbjct: 233 AEAQQVE 239
Score = 51.2 bits (121), Expect = 2e-07
Identities = 26/64 (40%), Positives = 44/64 (68%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T S SSSSSSSSSSSSSSS R++R + + +RR+++++R++ ++K K+K +
Sbjct: 176 TRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEA 235
Query: 78 RREE 81
++ E
Sbjct: 236 QQVE 239
Score = 49.7 bits (117), Expect = 5e-07
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 16 TLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKK 75
T + S SSSSSSSSSSSSSS R++R + + +RR+++++R++ KKK K+
Sbjct: 176 TRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKL----KKKGKE 231
Query: 76 KKRREEEEA 84
K ++ EA
Sbjct: 232 KAEAQQVEA 240
Score = 29.6 bits (65), Expect = 0.53
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 4 GEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRR 63
G A+ S P++ PE + S +R R+R R R R R
Sbjct: 81 GAALPSRPASRAAPRPEASSPPLPLEKARGGLSGPQGGRARGAMAHVGSRKRSRSRSRSR 140
Query: 64 RRRREEKKKQKKKKRREEEEAEEEEKK 90
R E++KK+ +K A +++
Sbjct: 141 GRGSEKRKKKSRKDTSRNCSASTSQER 167
>gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
sapiens]
Length = 142
Score = 57.4 bits (137), Expect = 2e-09
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T KEE + S + +S+ S +RR +RR +RR +RR +R EK+++K+++
Sbjct: 43 TSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEE 102
Query: 78 RREEEEAEEEEKK 90
EEEE EEEE++
Sbjct: 103 EEEEEEEEEEEEE 115
Score = 55.8 bits (133), Expect = 7e-09
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRR--RRRRREEKKKQKKKKR 78
K+E R S + +S+ S +RR +RR +RR +RR +RR +EE+K++++++
Sbjct: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
Query: 79 REEEEAEEEEKK 90
EEEE EEEE++
Sbjct: 107 EEEEEEEEEEEE 118
Score = 50.4 bits (119), Expect = 3e-07
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 19 PEKKEERRSRSSSSSSSSSSSSSSSRRRR-----RRRRRRRRRRRRRRRRRRRREEKKKQ 73
P K E + ++S+SS + R R+ +RR +RR +RR +R E+K++
Sbjct: 29 PHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRR 88
Query: 74 KKKKRREEEEAEEEEKK 90
+ K+R +EEE EEEE++
Sbjct: 89 EGKRREKEEEKEEEEEE 105
Score = 48.9 bits (115), Expect = 8e-07
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 3 RGEAVTSAPS------TCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRR 56
RG + S+P + F K+E ++S+SS + R+ +R
Sbjct: 8 RGFSSASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQR 67
Query: 57 RRRRRRRRRRREEKKKQKKK---KRREEEEAEEEEKK 90
R +RR +RREEK++++K+ KRRE+EE +EEE++
Sbjct: 68 REEKRREEKRREEKRREEKRREGKRREKEEEKEEEEE 104
Score = 44.3 bits (103), Expect = 2e-05
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 18/82 (21%)
Query: 9 SAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRRE 68
S T + ++E+R R +RR +RR +RR +RR + E
Sbjct: 56 SMAGTSARKSQRREEKR------------------REEKRREEKRREEKRREGKRREKEE 97
Query: 69 EKKKQKKKKRREEEEAEEEEKK 90
EK+++++++ EEEE EEEE++
Sbjct: 98 EKEEEEEEEEEEEEEEEEEEEE 119
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 55.5 bits (132), Expect = 9e-09
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+KE+R+ + +S R+ R+R R+ R R++ R + E+K++KK++R+
Sbjct: 110 EEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERK 169
Query: 80 EEEEAEEEEKK 90
+ E EEE K+
Sbjct: 170 QVGEKEEERKE 180
Score = 55.1 bits (131), Expect = 1e-08
Identities = 20/70 (28%), Positives = 42/70 (60%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+ ER+ R + + R+ R++R R R+ R++ R R+E++++KK++++
Sbjct: 155 EKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKK 214
Query: 80 EEEEAEEEEK 89
+EE +E +K
Sbjct: 215 KEERKKERQK 224
Score = 54.3 bits (129), Expect = 2e-08
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+KE ++ R+ R++R R R+ R++ R R+ RRE KK++KKK+ R
Sbjct: 159 ERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEER 218
Query: 80 EEEEAEEEE 88
++E ++ +
Sbjct: 219 KKERQKDRQ 227
Score = 52.4 bits (124), Expect = 8e-08
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
KK+E++ R +S R+R R+ R R++ R + R R+ +K+++K+ +E
Sbjct: 116 KKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKE 175
Query: 81 EEEAEEEEKK 90
EE E+E K+
Sbjct: 176 EERKEKERKE 185
Score = 52.4 bits (124), Expect = 8e-08
Identities = 19/69 (27%), Positives = 39/69 (56%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+++ER+ R R+ R++R R R+ R++ R R+ R E+KK++KKK
Sbjct: 159 ERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEER 218
Query: 81 EEEAEEEEK 89
++E +++ +
Sbjct: 219 KKERQKDRQ 227
Score = 52.0 bits (123), Expect = 1e-07
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 9 SAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRRE 68
S P T E +E R + S + RR R +R+R R + R+R R ++E
Sbjct: 26 SKPCTQPGWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKE 85
Query: 69 EK------KKQKKKKRREEEEAEEEEKK 90
+K ++++KK+RRE+E E EEK+
Sbjct: 86 KKGERKKEERERKKRRREKENKEGEEKE 113
Score = 52.0 bits (123), Expect = 1e-07
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
KK ER+ ++R R R+ R++ R R+ RR R++E KKK+++KK R+
Sbjct: 164 KKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQ 223
Query: 81 EEEAEEEEKK 90
++ +K
Sbjct: 224 KDRQTNWREK 233
Score = 51.2 bits (121), Expect = 2e-07
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRR-----RRRRRRRRRRREEKKKQK 74
E+K+E R R + +R+++ ++ R R + R R+ R+REE+K+++
Sbjct: 89 ERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERE 148
Query: 75 KKKRREEEEAEEEEKK 90
+KK E+E E +E+K
Sbjct: 149 RKKEEREKERERKERK 164
Score = 50.4 bits (119), Expect = 3e-07
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRR------------RRRRRRRRRRR 67
E+KEER+ R R+ R++R R++ R+ R++R R R
Sbjct: 134 ERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNR 193
Query: 68 EEKKKQKKKKRREEEEAEEEEKK 90
+E+KK++++K R E + E ++K+
Sbjct: 194 KERKKERERKERRERKKERKKKE 216
Score = 48.5 bits (114), Expect = 1e-06
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRR---------RRRRRRRRRRRRRREEKK 71
KKEER + + +R+++ ++ R R R+ R+R R+ E+K
Sbjct: 91 KKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERK 150
Query: 72 KQKKKKRREEEEAEEEEKK 90
K++++K RE +E ++ E+K
Sbjct: 151 KEEREKERERKERKKRERK 169
Score = 48.1 bits (113), Expect = 1e-06
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+KE ++ R S R R + R+R R ++ ++ R++ E+KK++++K +
Sbjct: 48 RKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENK 107
Query: 81 EEEAEEEEKK 90
E E +E+ KK
Sbjct: 108 EGEEKEKRKK 117
Score = 47.8 bits (112), Expect = 2e-06
Identities = 22/72 (30%), Positives = 45/72 (62%), Gaps = 15/72 (20%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRR-RRRRRRRRRREEKKKQKKKKR 78
E+K+ERR R +R+R R + R+R R ++ ++ R++EE++++K+++
Sbjct: 58 ERKKERRERE--------------KRKREREKERKRERGKKEKKGERKKEERERKKRRRE 103
Query: 79 REEEEAEEEEKK 90
+E +E EE+EK+
Sbjct: 104 KENKEGEEKEKR 115
Score = 46.2 bits (108), Expect = 5e-06
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRR----------RRRRRRRRRRRRRRRREEK 70
++E+ R R R R++RRR +R+++ ++ R R +E K
Sbjct: 72 EREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGK 131
Query: 71 KKQKKKKRREEEEAEEEEKK 90
++++K++R+ EE E E KK
Sbjct: 132 ERERKEERKREERKERERKK 151
Score = 46.2 bits (108), Expect = 5e-06
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRR--------RRRRRRRRRRRRRRRRRRRREEKK 71
E+K+ RR + + ++ R R R+ R+R R+ R R++EE++
Sbjct: 96 ERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEERE 155
Query: 72 KQKKKKRREEEE-----AEEEEKK 90
K++++K R++ E +EEE+K
Sbjct: 156 KERERKERKKRERKQVGEKEEERK 179
Score = 46.2 bits (108), Expect = 5e-06
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+EER+ + + ++ R R+ RR R++ R+++ R++ E++K ++ R
Sbjct: 173 EKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKK-ERQKDRQTNWR 231
Query: 80 EEEEAEEEEKK 90
E+E + E K+
Sbjct: 232 EKERGKRERKE 242
Score = 45.1 bits (105), Expect = 1e-05
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKR- 78
E+++ +R R R++ R R++RRR + + +E++KK++KK+R
Sbjct: 65 EREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERG 124
Query: 79 ----------REEEEAEEEEKK 90
R+EE EE K+
Sbjct: 125 RTSKEGKERERKEERKREERKE 146
Score = 43.5 bits (101), Expect = 4e-05
Identities = 17/71 (23%), Positives = 38/71 (53%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E K+ER S + R+R R ++ ++ R++ R R++++++K+ K
Sbjct: 50 EGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEG 109
Query: 80 EEEEAEEEEKK 90
EE+E ++++K
Sbjct: 110 EEKEKRKKKEK 120
Score = 43.5 bits (101), Expect = 4e-05
Identities = 16/71 (22%), Positives = 38/71 (53%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EKK ER+ + + +R+++ ++ R R + + E+K+++K++ R
Sbjct: 85 EKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREER 144
Query: 80 EEEEAEEEEKK 90
+E E ++EE++
Sbjct: 145 KERERKKEERE 155
Score = 38.9 bits (89), Expect = 9e-04
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 27 SRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEE 86
S S S + S R R R R+ ++ R R++E ++++K+K+ RE+E E
Sbjct: 21 SCSHISKPCTQPGWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRE 80
Query: 87 EEKK 90
KK
Sbjct: 81 RGKK 84
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 55.1 bits (131), Expect = 1e-08
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
Query: 13 TCFTLTPE----KKEERRSRSSSSSSSSSSSSSSSRRRRR-----------RRRRRRRRR 57
+C L P+ K+E++R +SSSSSSSSSS S SS + + ++R++
Sbjct: 173 SCGELIPKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKK 232
Query: 58 RRRRRRRRRREEKKKQKKKKRREEEEAEEE 87
+ R+ R+ ++EKKK+KK K+ E+E E
Sbjct: 233 KHRKNSRKHKKEKKKRKKSKKSASSESEAE 262
Score = 50.8 bits (120), Expect = 2e-07
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 20 EKKEERRSRSSSSSS----------SSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREE 69
EKK + S SSSSSS SSS SS S + ++R+++ R+ R+ ++ ++
Sbjct: 187 EKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSRKHKKEKK 246
Query: 70 KKKQKKKKRREEEEAEEEE 88
K+K+ KK E EAE E
Sbjct: 247 KRKKSKKSASSESEAENLE 265
Score = 42.7 bits (99), Expect = 6e-05
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRRE---EKKKQKKKKR 78
K + + R+ S S S S S S+ R + R +R R R + R E EK+KQ K
Sbjct: 449 KNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKG 508
Query: 79 REEEEAEEEEK 89
+++E + +EK
Sbjct: 509 KDQERSRSKEK 519
Score = 42.7 bits (99), Expect = 6e-05
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+++E R R S S + SR + RRRRRR R R + R ++K + ++ K
Sbjct: 594 REQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSH 653
Query: 81 EEEAEEEEKK 90
+E E EK+
Sbjct: 654 RKENSESEKR 663
Score = 40.4 bits (93), Expect = 3e-04
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E++ RR RS S + S S+ RRRRRR R R + R + + + ++ K R
Sbjct: 595 EQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHR 654
Query: 80 EEEEAEEE 87
+E E+
Sbjct: 655 KENSESEK 662
Score = 40.0 bits (92), Expect = 4e-04
Identities = 24/69 (34%), Positives = 29/69 (42%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
KE R R S S R R R + RRRRRR R REE + + K K R +
Sbjct: 588 KEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQ 647
Query: 82 EEAEEEEKK 90
E K+
Sbjct: 648 ESKSSHRKE 656
Score = 39.3 bits (90), Expect = 7e-04
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 7 VTSAPSTCFTLTPEKKEER-RSRS--SSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRR 63
+T + + T E+ R RSR S + S S R R + RRR R R R RR
Sbjct: 551 ITKGKHSYNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERR 610
Query: 64 RRRREEKKKQKKKKRREEEEAEEEEKK 90
+ K ++++RR+ +E EE +
Sbjct: 611 TPPGRSRSKDRRRRRRDSRSSEREESQ 637
Score = 38.1 bits (87), Expect = 0.001
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 16/86 (18%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRR----------------RRRR 63
+K+ + +SRS S S S S R +R R R + R + +
Sbjct: 453 KKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQE 512
Query: 64 RRRREEKKKQKKKKRREEEEAEEEEK 89
R R +EK KQ + K E + ++ +EK
Sbjct: 513 RSRSKEKSKQLESKSNEHDHSKSKEK 538
Score = 37.0 bits (84), Expect = 0.003
Identities = 15/70 (21%), Positives = 34/70 (48%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
K+ + R S + ++ + R + + + + + R + R EEK+ + + K R+
Sbjct: 434 KERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRD 493
Query: 81 EEEAEEEEKK 90
E +E+EK+
Sbjct: 494 HENVKEKEKQ 503
Score = 33.5 bits (75), Expect = 0.037
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
+P +K E+ + S+S RR + + + + ++R + + R + K+K K K+
Sbjct: 415 SPNRKNEKEKKVKDHKSNSKERDI--RRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKE 472
Query: 78 RREEEEAEEEEK 89
R + EE++
Sbjct: 473 RDSKHNRNEEKR 484
Score = 29.6 bits (65), Expect = 0.53
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+ + R R + +S +S +RR R R+ + R RR R + + + + RR
Sbjct: 296 EKERKNRERERERECNPPNSQPASYQRRLLVTRSGRKIKGRGPRRYRTPSRSRSRDRFRR 355
Query: 80 EE 81
E
Sbjct: 356 SE 357
Score = 27.7 bits (60), Expect = 2.0
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 20 EKKEERRS----RSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEK----K 71
E KE +RS + + + S S +R+ + ++ + + + R RR EK K
Sbjct: 390 EIKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYK 449
Query: 72 KQKKKKRREEEEAEEEEK 89
+ KK+ + + ++ +EK
Sbjct: 450 NKVKKRAKSKSRSKSKEK 467
Score = 25.4 bits (54), Expect = 10.0
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 20 EKKEERRSRSSSSSSSS--------SSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKK 71
EK+ +SR +SS++S S S ++ + + + + + R +K
Sbjct: 661 EKRMYSKSRDHNSSNNSREKKADRDQSPFSKIKQSSQDNELKSSMLKNKEDEKIRSSVEK 720
Query: 72 KQKKKKRREEEEAEEEEKK 90
+ +K K +E + E+ KK
Sbjct: 721 ENQKSKGQENDHVHEKNKK 739
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 54.7 bits (130), Expect = 2e-08
Identities = 27/69 (39%), Positives = 34/69 (49%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+ + RSRS S R R R R R R R R R R R R E++K KK+ R E+
Sbjct: 377 RNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDREED 436
Query: 82 EEAEEEEKK 90
EE E +K
Sbjct: 437 EEDAYERRK 445
Score = 53.1 bits (126), Expect = 4e-08
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+ +R S S S R R R R R R R R R R R RE +++++K K+R
Sbjct: 372 ERSSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKR 431
Query: 80 EEEEAEEE 87
+ EE EE+
Sbjct: 432 DREEDEED 439
Score = 42.4 bits (98), Expect = 8e-05
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRR-----RRRRRRRRRRRRRRREEKKKQK 74
E K + SR S + + ++ + R+ RR R R R R R RRE +++++
Sbjct: 271 EDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERE 330
Query: 75 KKKRREEEEAEEEEKK 90
+++ RE+E+ E E++
Sbjct: 331 REREREKEKERERERE 346
Score = 39.7 bits (91), Expect = 5e-04
Identities = 19/69 (27%), Positives = 30/69 (43%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK +R R R R R R R R R + ++R REE ++ ++R+
Sbjct: 386 EKSRDREREREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRK 445
Query: 80 EEEEAEEEE 88
E + E+E
Sbjct: 446 LERKLREKE 454
Score = 38.5 bits (88), Expect = 0.001
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK++ER + R R R R R R R R + R R +K + +++ R
Sbjct: 336 EKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERER 395
Query: 80 EEEEAEEEEKK 90
E E E E++
Sbjct: 396 ERERERERERE 406
Score = 37.4 bits (85), Expect = 0.003
Identities = 29/107 (27%), Positives = 38/107 (35%), Gaps = 38/107 (35%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRR----------------- 64
K+ RSR S R R R R R R R R R R R
Sbjct: 379 KDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDREEDEE 438
Query: 65 ----RRREEKK-----------------KQKKKKRREEEEAEEEEKK 90
RR+ E+K +++KK R E+EAE EE++
Sbjct: 439 DAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEER 485
Score = 36.6 bits (83), Expect = 0.004
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+E R + + +R + RRR+ + ++ EE+K++K++KR
Sbjct: 539 EKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKRE 598
Query: 80 E--EEEAEEEEK 89
E EEE E E+K
Sbjct: 599 EPMEEEEEPEQK 610
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+ EE R R + + R + RRR+ + ++ EEK+++++K+
Sbjct: 541 EELEEIRQRLLAEGHPDPDAELQ-RMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREE 599
Query: 80 EEEEAEEEEKK 90
EE EE E+K
Sbjct: 600 PMEEEEEPEQK 610
Score = 30.8 bits (68), Expect = 0.24
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRR---RRREEKKKQKKKK 77
++E R + + RR+ R+ R + + R + R R++ ++ +K+
Sbjct: 420 EREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEA 479
Query: 78 RREEEEAEEEEKK 90
REEE E K+
Sbjct: 480 EREEERRREMAKE 492
Score = 29.3 bits (64), Expect = 0.69
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 24/94 (25%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKK-------- 72
+K ER+ R ++ + R R++ R + R RRR +E K+
Sbjct: 444 RKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDY 503
Query: 73 ---------------QKKKKRREEE-EAEEEEKK 90
QK+ + RE+E EA+E ++K
Sbjct: 504 DDDRDDPKYYRGSALQKRLRDREKEMEADERDRK 537
Score = 27.3 bits (59), Expect = 2.6
Identities = 16/66 (24%), Positives = 30/66 (45%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++EE R R + + R + R ++R R R +E + ++ ++RE
Sbjct: 480 EREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKRE 539
Query: 81 EEEAEE 86
+EE EE
Sbjct: 540 KEELEE 545
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 54.3 bits (129), Expect = 2e-08
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 17 LTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRR-------RRR----RRRRRR 65
+ P+KKEE+R S S S S + SS R RR R R RRR RRR RRRR
Sbjct: 237 IEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSH 296
Query: 66 RREEKKKQKKKKRREEEEAEEEEKK 90
RE ++ + + +++ E++EKK
Sbjct: 297 SRERGRRSRSTSKTRDKKKEDKEKK 321
Score = 50.4 bits (119), Expect = 3e-07
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
TP RRSRS S S S S S RRR + RRRR R R RR R K + KKK+
Sbjct: 260 TPSSSRHRRSRSRSRRRSHSKSRS---RRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKE 316
Query: 78 RREEEEAEEEEK 89
+E++ ++ K
Sbjct: 317 DKEKKRSKTPPK 328
Score = 50.1 bits (118), Expect = 4e-07
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRR------------RRRRRRRRRRRRRR 67
E KE++RS++ S S++ S S+ R RRRRR R +R+ R RR +
Sbjct: 316 EDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHK 375
Query: 68 EEKKKQKKKKRREEEEAEEEEKK 90
+EKKK K K+R +E KK
Sbjct: 376 KEKKKDKDKERSRDERERSTSKK 398
Score = 42.4 bits (98), Expect = 8e-05
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 21 KKEERRSRSSSSSSSS------SSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQK 74
++ RRSRS + S S S S RR ++ +++ + + R R R R KKK+
Sbjct: 342 ERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKS 401
Query: 75 KKKRREEEEAEEEEK 89
K K ++ E E +K
Sbjct: 402 KDKEKDRERKSESDK 416
Score = 40.8 bits (94), Expect = 2e-04
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 11 PSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEK 70
PS+ + RRS S S S S S RRRR R R RR R + R++K
Sbjct: 261 PSSSRHRRSRSRSRRRSHSKSRSRRRSKSP------RRRRSHSRERGRRSRSTSKTRDKK 314
Query: 71 KKQKKKKR 78
K+ K+KKR
Sbjct: 315 KEDKEKKR 322
Score = 40.4 bits (93), Expect = 3e-04
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 2 QRGEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSS---------SSSSSSRRRRRRRRR 52
+R + + ST +E RR RS S + S S S S RR ++ +++
Sbjct: 321 KRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKK 380
Query: 53 RRRRRRRRRRRRRRREEKKKQK-KKKRREEEEAEEEEKK 90
+ + R R R R +KKK K K+K RE + +++ K
Sbjct: 381 DKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVK 419
Score = 35.8 bits (81), Expect = 0.007
Identities = 18/80 (22%), Positives = 36/80 (45%)
Query: 10 APSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREE 69
+PS + ++ EE R + S S++ ++ +RR R R R RRRR
Sbjct: 207 SPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRH 266
Query: 70 KKKQKKKKRREEEEAEEEEK 89
++ + + +RR ++ +
Sbjct: 267 RRSRSRSRRRSHSKSRSRRR 286
Score = 33.9 bits (76), Expect = 0.028
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 16 TLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRR-----RRRRRREEK 70
T + E +E + + S S++ + +RR R R R RRRR R RR R
Sbjct: 214 TSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRS 273
Query: 71 KKQKKKKRREEEEAEEEEKK 90
+++ K R ++ ++
Sbjct: 274 RRRSHSKSRSRRRSKSPRRR 293
Score = 31.2 bits (69), Expect = 0.18
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
K++ RSR S+S S + + R R+ + ++ R EE+ +K+++EE
Sbjct: 382 KDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKEE 441
Query: 82 EEAEE 86
++ E
Sbjct: 442 KKPIE 446
>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 53.9 bits (128), Expect = 3e-08
Identities = 17/62 (27%), Positives = 42/62 (67%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EKKE+ + + +++++++++++++R+R+R+R+R+R++K+K+KKKK
Sbjct: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
Query: 80 EE 81
E
Sbjct: 164 NE 165
Score = 52.0 bits (123), Expect = 1e-07
Identities = 16/66 (24%), Positives = 43/66 (65%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+K+E+ ++++++++++++++R+R+R+R+R+ +KK++KKKK+
Sbjct: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
Query: 80 EEEEAE 85
E A+
Sbjct: 163 GNEGAK 168
Score = 49.3 bits (116), Expect = 6e-07
Identities = 11/62 (17%), Positives = 43/62 (69%)
Query: 19 PEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKR 78
P+++E++ ++++++++++++++++R+R+R+R+ ++KK++KKK+
Sbjct: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
Query: 79 RE 80
++
Sbjct: 160 KK 161
Score = 49.3 bits (116), Expect = 6e-07
Identities = 11/61 (18%), Positives = 44/61 (72%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++EE++ + +++++++++++++++++R+R+R+R+ K+K+K+KK+++
Sbjct: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
Query: 81 E 81
+
Sbjct: 161 K 161
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 53.5 bits (127), Expect = 3e-08
Identities = 23/71 (32%), Positives = 44/71 (61%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+ +R++++ + + RRR R+R R R + R R R R+ E KK++KK++++
Sbjct: 206 ERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKK 265
Query: 80 EEEEAEEEEKK 90
E +E ++EEK+
Sbjct: 266 ERKEKKKEEKR 276
Score = 52.0 bits (123), Expect = 1e-07
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T +++ +R + + RRR R+R R R + R R R R+EE+KK++KK+
Sbjct: 203 TDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKE 262
Query: 78 RREEEEAEEEEKK 90
R++E + +++E+K
Sbjct: 263 RKKERKEKKKEEK 275
Score = 42.7 bits (99), Expect = 6e-05
Identities = 18/68 (26%), Positives = 37/68 (54%)
Query: 16 TLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKK 75
T T ++E R + R + R R R R+ R++ R++ R++E+K++KK
Sbjct: 213 TQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKK 272
Query: 76 KKRREEEE 83
+++R E++
Sbjct: 273 EEKRREDK 280
Score = 40.0 bits (92), Expect = 4e-04
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++KE R+R + +++ R R R R R R R R R + E++ +K + +
Sbjct: 105 KEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQ 164
Query: 80 EEEEAEEEEKK 90
E E E E +
Sbjct: 165 RETETERERDR 175
Score = 38.5 bits (88), Expect = 0.001
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 28 RSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEE 87
RS + + R+R R R R + + R R R+R RE ++K+K+ R + E + E
Sbjct: 61 RSWGLGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTE 120
Score = 38.5 bits (88), Expect = 0.001
Identities = 15/69 (21%), Positives = 35/69 (50%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+E+ R R + + + R R R R +++ R R R R+R EK+++++ R +
Sbjct: 149 REKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERD 208
Query: 82 EEAEEEEKK 90
+ + + ++
Sbjct: 209 RQRKTQTER 217
Score = 38.1 bits (87), Expect = 0.001
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 40 SSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEEEK 89
+ R R R+R R RRR+ + R R RE++ + ++ + RE+++ E E+
Sbjct: 88 TEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERER 137
Score = 38.1 bits (87), Expect = 0.001
Identities = 15/64 (23%), Positives = 33/64 (51%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+E R R R R R+ R++ R++ R++ R+E+KK++K+++ ++
Sbjct: 223 REGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKR 282
Query: 82 EEAE 85
+ E
Sbjct: 283 KWGE 286
Score = 37.7 bits (86), Expect = 0.002
Identities = 12/55 (21%), Positives = 29/55 (52%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKK 72
T ++E +R R R++ R++ R++ R+ +++ +RR ++K+K
Sbjct: 229 TDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRK 283
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRR--RRRRRRRRRRRRRRREEKKKQKKKKRR 79
+E RS + + R R R R + + R R R+R R RRR+EK+ + + R
Sbjct: 57 QESPRSWGLGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDRE 116
Query: 80 EEEEAEEEEKK 90
++ E E + ++
Sbjct: 117 KQTEIERDRER 127
Score = 36.6 bits (83), Expect = 0.004
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 45 RRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
R + + R R R+R R RRR+ +E + + ++K+ E E E EK+
Sbjct: 85 REKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQ 130
Score = 36.2 bits (82), Expect = 0.006
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++E R R + RRR+ + R R R ++ R E++KQK ++R
Sbjct: 78 QRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERER 137
Query: 81 EEEAEEEEKK 90
+ E E +
Sbjct: 138 DRGRERERDR 147
Score = 36.2 bits (82), Expect = 0.006
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 15/84 (17%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKR-- 78
+KE+ +R+ + R +++ R R R R R R R R R +E+++Q +K R
Sbjct: 104 RKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDG 163
Query: 79 -------------REEEEAEEEEK 89
RE+++ E E+
Sbjct: 164 QRETETERERDREREKQKERETER 187
Score = 35.4 bits (80), Expect = 0.010
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 23 EERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEE 82
E R R + R R+R + R R+ R R R+R+ + ++Q++ R E
Sbjct: 168 ETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGER 227
Query: 83 EAEEEEKK 90
E + ++
Sbjct: 228 ETDRRRER 235
Score = 35.0 bits (79), Expect = 0.013
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 23 EERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRR----REEKKKQKKKKR 78
++R+ + R+R R RRR+ + R R R ++ R+ +++++K +
Sbjct: 75 DDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRE 134
Query: 79 REEEEAEEEEK 89
RE + E E+
Sbjct: 135 RERDRGRERER 145
Score = 35.0 bits (79), Expect = 0.013
Identities = 14/71 (19%), Positives = 35/71 (49%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+ ER++ + + R R +++ R R R R+R +E +++ +++ R
Sbjct: 150 EKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDR 209
Query: 80 EEEEAEEEEKK 90
+ + E +++
Sbjct: 210 QRKTQTERQRE 220
Score = 35.0 bits (79), Expect = 0.013
Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 29/100 (29%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRRE----------- 68
E+ ER + + + + R R+ R R R+R+ + R+RE
Sbjct: 172 ERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDR 231
Query: 69 ------------------EKKKQKKKKRREEEEAEEEEKK 90
++K+++KK+R++E + E +EKK
Sbjct: 232 RRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKK 271
Score = 33.9 bits (76), Expect = 0.028
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 23 EERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRR------RREEKKKQKKK 76
+ +R R + +R R RRR+ + R R R ++ R EK+K +++
Sbjct: 76 DRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRER 135
Query: 77 KR---REEEEAEEEEKK 90
+R RE E + EK+
Sbjct: 136 ERDRGRERERDRDREKE 152
Score = 33.1 bits (74), Expect = 0.048
Identities = 14/68 (20%), Positives = 30/68 (44%)
Query: 23 EERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEE 82
E R R + R+R + R R+ R R R+R+ + E++++ ++ E
Sbjct: 170 ERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERET 229
Query: 83 EAEEEEKK 90
+ E ++
Sbjct: 230 DRRRERQR 237
Score = 32.0 bits (71), Expect = 0.11
Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR-----RRRRRRREEKKKQKK 75
++E+++ R R + R R+ + R +R R R R RE++K+++
Sbjct: 126 EREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERET 185
Query: 76 KKRREEEEAEEEEKK 90
++ R+ + E+E++
Sbjct: 186 ERDRDRQRDTEKERE 200
Score = 31.6 bits (70), Expect = 0.14
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 26 RSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAE 85
R R S S S + + R+R R R R + + R+ +K+ +++RR+E+E
Sbjct: 51 RGRLGSQESPRSWGLGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETN 110
Query: 86 EEEKK 90
+
Sbjct: 111 RNRDR 115
Score = 28.9 bits (63), Expect = 0.90
Identities = 14/71 (19%), Positives = 30/71 (42%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E + ER + R+R + R R+ R R R+R+ + +++++ +
Sbjct: 166 ETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREG 225
Query: 80 EEEEAEEEEKK 90
E E E++
Sbjct: 226 ERETDRRRERQ 236
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 52.8 bits (125), Expect = 6e-08
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 13/83 (15%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRR-------------R 67
K+E R+R + + R R R R R+R+R R R+R+R R R
Sbjct: 105 KRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAER 164
Query: 68 EEKKKQKKKKRREEEEAEEEEKK 90
EE+KK++KK+R++E + +++E+K
Sbjct: 165 EERKKERKKERKKERKEKKKEEK 187
Score = 48.9 bits (115), Expect = 8e-07
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRR---RRRRRRRRREEKKKQKKKKR 78
K+ R R R+R R+R R R+R R R++ R++E+KK++K+K+
Sbjct: 124 KQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKK 183
Query: 79 REEEEAEEEEKK 90
+EE+ E++++K
Sbjct: 184 KEEKRREDKKRK 195
Score = 44.3 bits (103), Expect = 2e-05
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T ++++ R R + + + R R ++ R R R R R+R+R E+++Q+++K
Sbjct: 92 TDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERK 151
Query: 78 RREEEE----AEEEEKK 90
R + E AE EE+K
Sbjct: 152 RETDRERQRWAEREERK 168
Score = 44.3 bits (103), Expect = 2e-05
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+E +R + + ++ R R R R R+R+R R R+R+ E+K++ ++R+
Sbjct: 102 RERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRW 161
Query: 82 EEAEEEEKK 90
E EE +K+
Sbjct: 162 AEREERKKE 170
Score = 43.9 bits (102), Expect = 3e-05
Identities = 17/71 (23%), Positives = 37/71 (52%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E++ R R + R R++ R R+R+R R R R+ E+++Q+++KR+
Sbjct: 32 ERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQ 91
Query: 80 EEEEAEEEEKK 90
+ E +++ +
Sbjct: 92 TDRERDKDRDR 102
Score = 43.9 bits (102), Expect = 3e-05
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++E R R R+R R R+R R R++ R++E KK++K+KK+ E
Sbjct: 127 ERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEE 186
Query: 81 EEEAEEEEK 89
+ +++ K
Sbjct: 187 KRREDKKRK 195
Score = 42.4 bits (98), Expect = 8e-05
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRR---RRRRRRRRRRRRRRRRRRREEKKKQK 74
T ++E +R R + R R+R R R R R+ R R ++ RE ++++
Sbjct: 76 TERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERE 135
Query: 75 KKKRREEEEAEEEEKK 90
++++RE E + E+K
Sbjct: 136 RQRQRERERQRQRERK 151
Score = 42.0 bits (97), Expect = 1e-04
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+++ R R + R R+R+R R R R+R R+R+ E+K+Q ++R +
Sbjct: 39 QRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDK 98
Query: 81 EEEAEEEEK 89
+ + E + +
Sbjct: 99 DRDRERKRE 107
Score = 41.2 bits (95), Expect = 2e-04
Identities = 16/73 (21%), Positives = 38/73 (52%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T +++ +R R + + + R R R+ R + R R++ R R+R+ +++ +++
Sbjct: 17 TERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERET 76
Query: 78 RREEEEAEEEEKK 90
R+ E + E+K
Sbjct: 77 ERQRERQRQRERK 89
Score = 40.8 bits (94), Expect = 2e-04
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRR--RRRRRRRRREEKKKQKKKK 77
EK+ ER+ + + R+R R+R+R R+R+ R R + R RE K++ + +
Sbjct: 53 EKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNR 112
Query: 78 RREEEEAEEEEKK 90
R + E +K+
Sbjct: 113 ERNRKGGRERDKQ 125
Score = 40.4 bits (93), Expect = 3e-04
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 23 EERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEE 82
E +R R + + R+R R + R R R+R R R R+ + ++K++ R++E
Sbjct: 2 ERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKE 61
Query: 83 EAEEEEKK 90
+ +++
Sbjct: 62 RDRQRQRE 69
Score = 40.4 bits (93), Expect = 3e-04
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+K E + ++ R R R+R R R R R+ R +E+++QK++ R+
Sbjct: 6 ERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQ 65
Query: 80 EEEEAEEEEK 89
+ E E E +
Sbjct: 66 RQRERETERE 75
Score = 40.0 bits (92), Expect = 4e-04
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRR-------RRRRRRRRRRRRRRRRREEKKKQK 74
+ R R + R+R+R R R+R R+R+R R+R+ RE K +
Sbjct: 42 RHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRD 101
Query: 75 KKKRREEEEAEEEEKK 90
++++RE + E +K
Sbjct: 102 RERKRETDRNRERNRK 117
Score = 39.7 bits (91), Expect = 5e-04
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRR-RRRRRRRRRREEKKKQKKKKR 78
E + +R R + R++ R R+R+R R R R+R R+ ++++K++
Sbjct: 34 ENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTD 93
Query: 79 REEEEAEEEEKK 90
RE ++ + E+K
Sbjct: 94 RERDKDRDRERK 105
Score = 39.3 bits (90), Expect = 7e-04
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRR---RRRRRRRRRRRRRRREEKKKQKKKK 77
+KE R R + + R+R+R R+R R R + R R R+R + +++ +K
Sbjct: 59 QKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKG 118
Query: 78 RREEEEAEEEEK 89
RE ++ E E+
Sbjct: 119 GRERDKQTERER 130
Score = 39.3 bits (90), Expect = 7e-04
Identities = 15/71 (21%), Positives = 37/71 (52%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++++ +R R + + R+R R+R+ R R + R R R+R ++ +++ +K
Sbjct: 60 KERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGG 119
Query: 80 EEEEAEEEEKK 90
E + + E ++
Sbjct: 120 RERDKQTERER 130
Score = 38.9 bits (89), Expect = 9e-04
Identities = 14/70 (20%), Positives = 35/70 (50%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E++ ER+ + + R + R R R+R R R R R+ +++K++++++
Sbjct: 2 ERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKE 61
Query: 80 EEEEAEEEEK 89
+ + + E +
Sbjct: 62 RDRQRQRERE 71
Score = 38.9 bits (89), Expect = 9e-04
Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRR-RRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++E +R R + R R+R R R++ R++ R++ R+E+KK++K+++ +
Sbjct: 133 ERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEEKRREDK 192
Query: 80 EEEEAE 85
+ + E
Sbjct: 193 KRKWGE 198
Score = 37.7 bits (86), Expect = 0.002
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
++ R R + + R R+R+R R R R+R R+ +++++++ R +
Sbjct: 38 RQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERD 97
Query: 82 EEAEEEEKK 90
++ + E K+
Sbjct: 98 KDRDRERKR 106
Score = 37.7 bits (86), Expect = 0.002
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E++ ER+ + + R R R+R R R R R+ RE K+ ++++ R
Sbjct: 73 ERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDR 132
Query: 80 EEEEAEEEEKK 90
E E + E++
Sbjct: 133 ERERQRQRERE 143
Score = 35.8 bits (81), Expect = 0.007
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
++ +R R + + R R+R+ R R + R R R+R +++ +K R +
Sbjct: 64 RQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERD 123
Query: 82 EEAEEEEKK 90
++ E E +
Sbjct: 124 KQTERERDR 132
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 52.8 bits (125), Expect = 6e-08
Identities = 21/77 (27%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR------RRRRRRREEKKKQ 73
+KK+E + + R+ +R+ +R+ + ++++ R+ + E+K+K+
Sbjct: 5 KKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKR 64
Query: 74 KKKKRREEEEAEEEEKK 90
K+KK++EEEE EEEE++
Sbjct: 65 KRKKKKEEEEREEEEEE 81
Score = 50.8 bits (120), Expect = 2e-07
Identities = 19/71 (26%), Positives = 39/71 (54%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+ EE + ++++ + +R+ + ++R+R+ KKK+++++R
Sbjct: 17 EETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEERE 76
Query: 80 EEEEAEEEEKK 90
EEEE EEEEK+
Sbjct: 77 EEEEEEEEEKE 87
Score = 50.8 bits (120), Expect = 2e-07
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 17/88 (19%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREE---------- 69
++KE+R+ + + + R+ + ++R+R+R++++ REE
Sbjct: 28 KRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKE 87
Query: 70 -------KKKQKKKKRREEEEAEEEEKK 90
++++KKKKRR +EE EE++KK
Sbjct: 88 EEEKEEGRRRKKKKKRRRKEEEEEKKKK 115
Score = 49.3 bits (116), Expect = 6e-07
Identities = 19/71 (26%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+KE +R ++ +R+ + ++R+R+R++++EE++++++++
Sbjct: 23 EEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEE- 81
Query: 80 EEEEAEEEEKK 90
EEEE EEEEK+
Sbjct: 82 EEEEKEEEEKE 92
Score = 48.1 bits (113), Expect = 1e-06
Identities = 17/73 (23%), Positives = 39/73 (53%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T E +EE ++++ + +R+ + ++R+R+ +KKK+++++
Sbjct: 16 TEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEER 75
Query: 78 RREEEEAEEEEKK 90
EEEE EEE+++
Sbjct: 76 EEEEEEEEEEKEE 88
Score = 47.4 bits (111), Expect = 2e-06
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 15/86 (17%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQK---KK 76
+KK++++ + + + + + +R+ +R+ +R+ + ++++ + EK+K+K +K
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEK 60
Query: 77 KR------------REEEEAEEEEKK 90
KR REEEE EEEE+K
Sbjct: 61 KRKRKRKKKKEEEEREEEEEEEEEEK 86
Score = 47.4 bits (111), Expect = 2e-06
Identities = 15/71 (21%), Positives = 42/71 (59%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E++EE+ + ++ + +R+ + ++R+R+R+++K+++++++
Sbjct: 20 EEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEE 79
Query: 80 EEEEAEEEEKK 90
EEEE E+EE++
Sbjct: 80 EEEEEEKEEEE 90
Score = 47.4 bits (111), Expect = 2e-06
Identities = 15/70 (21%), Positives = 42/70 (60%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+ +R+ + + +R+ + ++R+R+R++++ EE++++++++
Sbjct: 24 EKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEE 83
Query: 80 EEEEAEEEEK 89
EE+E EE+E+
Sbjct: 84 EEKEEEEKEE 93
Score = 47.0 bits (110), Expect = 3e-06
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EKK +R+ + + + RRR+++++RRR+EE++++KKK+RR
Sbjct: 59 EKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRR 118
Query: 80 EEEE 83
+ ++
Sbjct: 119 KTKK 122
Score = 45.8 bits (107), Expect = 7e-06
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+K+ +R R + + RRR+++++RRR+E++++KKKKRR
Sbjct: 58 EEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRR 117
Query: 80 EE 81
+
Sbjct: 118 RK 119
Score = 43.9 bits (102), Expect = 3e-05
Identities = 14/64 (21%), Positives = 36/64 (56%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+K++ +R + + + RRR+++++RRR+ EE++K+KK++R+
Sbjct: 60 KKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRK 119
Query: 80 EEEE 83
+++
Sbjct: 120 TKKK 123
Score = 42.7 bits (99), Expect = 6e-05
Identities = 19/89 (21%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRR--------------- 64
E K + + + + + +R+ + ++R+R+R++++
Sbjct: 26 EGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEE 85
Query: 65 ---RRREEKKKQKKKKRREEEEAEEEEKK 90
+EE +++KKKK+R +E EEE+KK
Sbjct: 86 KEEEEKEEGRRRKKKKKRRRKEEEEEKKK 114
Score = 40.8 bits (94), Expect = 2e-04
Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRR--------------- 64
EK++E+R + + + ++R+R+R++++ R
Sbjct: 31 EKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEE 90
Query: 65 ----RRREEKKKQKKKKRREEEEAEEEEK 89
RRR++KKK+++K+ EE++ + K
Sbjct: 91 KEEGRRRKKKKKRRRKEEEEEKKKKRRRK 119
Score = 38.1 bits (87), Expect = 0.001
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 21/87 (24%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRR---------------- 63
EK++E+ + + + ++R+R+R++++ R
Sbjct: 35 EKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEG 94
Query: 64 RRRREEKKKQKKKKRREEEEAEEEEKK 90
RRR+++ KK+RR+EEE E+++K+
Sbjct: 95 RRRKKK-----KKRRRKEEEEEKKKKR 116
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 52.8 bits (125), Expect = 6e-08
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++ E RSR+ SS S S S +R R R RRRRR R R + R RR K+K+K+ +
Sbjct: 1838 KRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKH 1897
Query: 80 EEEEAEEEEKK 90
+ E + K+
Sbjct: 1898 RSKSRERKRKR 1908
Score = 52.4 bits (124), Expect = 8e-08
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRR----RRRRREEKKKQ 73
T E + R RSS S S S + S SR RRRRR R R + R RR +R+R K +
Sbjct: 1840 TSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRS 1899
Query: 74 KKKKRREEEEAEEEEKK 90
K ++R+ + + + +K
Sbjct: 1900 KSRERKRKRSSSRDNRK 1916
Score = 48.5 bits (114), Expect = 1e-06
Identities = 26/70 (37%), Positives = 35/70 (50%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+K SRS + SS S S S+ R R R RRRRR R R + R R K+K+K+ +
Sbjct: 1837 RKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPK 1896
Query: 81 EEEAEEEEKK 90
E K+
Sbjct: 1897 HRSKSRERKR 1906
Score = 47.0 bits (110), Expect = 3e-06
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRR---RRRREEKKKQKKKK 77
K +R S S S + SS S S R + R R R RRRRR R R R RR K+++K+
Sbjct: 1835 KSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRS 1894
Query: 78 RREEEEAEEEEKK 90
+ ++ E ++K
Sbjct: 1895 PKHRSKSRERKRK 1907
Score = 45.1 bits (105), Expect = 1e-05
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKK------QK 74
K E +SR +S S S + SS+ + R + R R R RRRRR R K + ++
Sbjct: 1830 KSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKE 1889
Query: 75 KKKRREEEEAEEEEKK 90
K+KR + ++ E+K
Sbjct: 1890 KRKRSPKHRSKSRERK 1905
Score = 44.7 bits (104), Expect = 2e-05
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+ +RS+SS S +S S SR R+R + + R + R R R RR + + + K R
Sbjct: 1823 RSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRG 1882
Query: 81 EEEAEEEEKK 90
+E++K
Sbjct: 1883 RRSVSKEKRK 1892
Score = 41.2 bits (95), Expect = 2e-04
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 13/84 (15%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR-------------RRRRRR 66
+K E+ + R SS S S S SS + R+R R R R+R R R RR
Sbjct: 1810 DKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRR 1869
Query: 67 REEKKKQKKKKRREEEEAEEEEKK 90
R + + K R ++E+ K+
Sbjct: 1870 RRRSSRSRSKSRGRRSVSKEKRKR 1893
Score = 39.7 bits (91), Expect = 5e-04
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+ RR RSS S S S S S+ +R+R + R + R R+R+R + +K + + R
Sbjct: 1866 RSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSR 1923
Score = 37.0 bits (84), Expect = 0.003
Identities = 17/69 (24%), Positives = 28/69 (40%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
KK + R + SS S S+R + + R+R R R R+R K K + + R
Sbjct: 1804 KKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRS 1863
Query: 81 EEEAEEEEK 89
+ +
Sbjct: 1864 RSRSRRRRR 1872
Score = 36.6 bits (83), Expect = 0.004
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+ + RSRS S SS S S R RR + +R+R + R + R ++K+ + R+
Sbjct: 1858 RSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKT 1917
Query: 82 EEA 84
A
Sbjct: 1918 VRA 1920
Score = 36.6 bits (83), Expect = 0.004
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRR--RREEKKKQKK 75
T + RR R SS S S S S + +R+R + R + R R+R+R R+ +K +
Sbjct: 1861 TRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRA 1920
Query: 76 KKR 78
+ R
Sbjct: 1921 RSR 1923
Score = 35.0 bits (79), Expect = 0.013
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRR-------RRRRRRRRRRRREEK 70
TP ++ R+ S S + S S + SRRRR R RRR R RR R RRR +
Sbjct: 1973 TPSRRS--RTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSR 2030
Query: 71 KKQKKKKRREEEEAEEEEK 89
++K+ R E ++
Sbjct: 2031 SPIRRKRSRSSERGRSPKR 2049
Score = 34.3 bits (77), Expect = 0.022
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 18 TPEKKEE---RRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQK 74
TP ++ RR RS S S S S R RR R RRR R RR+R R ++ +
Sbjct: 1987 TPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRS 2046
Query: 75 KKKRREEEEAE 85
K+ + ++A+
Sbjct: 2047 PKRLTDLDKAQ 2057
Score = 33.5 bits (75), Expect = 0.037
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 15 FTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQK 74
F+++P ++ R+ S S + S S + SRR R RR R RR R RRR + +
Sbjct: 1949 FSISPSRRS--RTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVR 2006
Query: 75 KK 76
++
Sbjct: 2007 RR 2008
Score = 33.1 bits (74), Expect = 0.048
Identities = 19/64 (29%), Positives = 25/64 (39%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
K RRS S S S SR R+R+R R R+ R R R + + RR
Sbjct: 1879 KSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRR 1938
Query: 81 EEEA 84
+
Sbjct: 1939 RSRS 1942
Score = 32.7 bits (73), Expect = 0.063
Identities = 19/71 (26%), Positives = 30/71 (42%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+ +E +R RSSS + + + S RR R RRRR R RRR ++ R
Sbjct: 1900 KSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRT 1959
Query: 80 EEEEAEEEEKK 90
+ ++
Sbjct: 1960 PSRRSRTPSRR 1970
Score = 32.3 bits (72), Expect = 0.082
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRR-----RRRRRRRRRRRREEKKKQK 74
+ ++ R+RS + S S S + S RRR R RRR RR R RR R ++ +
Sbjct: 1913 DNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSR 1972
Query: 75 KKKRR 79
RR
Sbjct: 1973 TPSRR 1977
Score = 32.0 bits (71), Expect = 0.11
Identities = 9/36 (25%), Positives = 28/36 (77%)
Query: 54 RRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEEEK 89
++ ++ ++ + +++++KK+++KK +R+ EE+E + K
Sbjct: 106 KKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESKTK 141
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRR---RRRRRRRREEKKKQK 74
T EK ++ ++R SS SR +R + + R+R R R R+R + K +
Sbjct: 1799 THEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHR 1858
Query: 75 KKKR 78
+ R
Sbjct: 1859 SQTR 1862
Score = 30.4 bits (67), Expect = 0.31
Identities = 9/34 (26%), Positives = 25/34 (73%)
Query: 57 RRRRRRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
++ ++ ++ + ++KKK+K+K+++ + + EE E K
Sbjct: 106 KKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESK 139
Score = 29.3 bits (64), Expect = 0.69
Identities = 8/30 (26%), Positives = 24/30 (80%)
Query: 53 RRRRRRRRRRRRRRREEKKKQKKKKRREEE 82
++ ++ ++ + ++++++K+K+KK KR+ EE
Sbjct: 106 KKSKKHKKHKNKKKKKKKEKEKKYKRQPEE 135
Score = 29.3 bits (64), Expect = 0.69
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++K +R + S S SSSR R+ R R R RR R ++ + +RR
Sbjct: 1888 KEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRR 1947
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/91 (15%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 7 VTSAPSTCFTLTPEKKEE-------RRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRR 59
V+S P + E+K++ + + S + + ++R R R +R +
Sbjct: 1772 VSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKS 1831
Query: 60 RRRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
+ R+R + + + +KR + ++ + +
Sbjct: 1832 SEHKSRKRTSESRSRARKRSSKSKSHRSQTR 1862
Score = 27.3 bits (59), Expect = 2.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 16 TLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRR-----RRRRRREEK 70
+++ EK++ S S SSS R+ R R R RR R RRRR R
Sbjct: 1885 SVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVG 1944
Query: 71 KKQ 73
+++
Sbjct: 1945 RRR 1947
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 52.8 bits (125), Expect = 6e-08
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++ E RSR+ SS S S S +R R R RRRRR R R + R RR K+K+K+ +
Sbjct: 1838 KRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKH 1897
Query: 80 EEEEAEEEEKK 90
+ E + K+
Sbjct: 1898 RSKSRERKRKR 1908
Score = 52.4 bits (124), Expect = 8e-08
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRR----RRRRREEKKKQ 73
T E + R RSS S S S + S SR RRRRR R R + R RR +R+R K +
Sbjct: 1840 TSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRS 1899
Query: 74 KKKKRREEEEAEEEEKK 90
K ++R+ + + + +K
Sbjct: 1900 KSRERKRKRSSSRDNRK 1916
Score = 48.5 bits (114), Expect = 1e-06
Identities = 26/70 (37%), Positives = 35/70 (50%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+K SRS + SS S S S+ R R R RRRRR R R + R R K+K+K+ +
Sbjct: 1837 RKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPK 1896
Query: 81 EEEAEEEEKK 90
E K+
Sbjct: 1897 HRSKSRERKR 1906
Score = 47.0 bits (110), Expect = 3e-06
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRR---RRRREEKKKQKKKK 77
K +R S S S + SS S S R + R R R RRRRR R R R RR K+++K+
Sbjct: 1835 KSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRS 1894
Query: 78 RREEEEAEEEEKK 90
+ ++ E ++K
Sbjct: 1895 PKHRSKSRERKRK 1907
Score = 45.1 bits (105), Expect = 1e-05
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKK------QK 74
K E +SR +S S S + SS+ + R + R R R RRRRR R K + ++
Sbjct: 1830 KSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKE 1889
Query: 75 KKKRREEEEAEEEEKK 90
K+KR + ++ E+K
Sbjct: 1890 KRKRSPKHRSKSRERK 1905
Score = 44.7 bits (104), Expect = 2e-05
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+ +RS+SS S +S S SR R+R + + R + R R R RR + + + K R
Sbjct: 1823 RSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRG 1882
Query: 81 EEEAEEEEKK 90
+E++K
Sbjct: 1883 RRSVSKEKRK 1892
Score = 41.2 bits (95), Expect = 2e-04
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 13/84 (15%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR-------------RRRRRR 66
+K E+ + R SS S S S SS + R+R R R R+R R R RR
Sbjct: 1810 DKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRR 1869
Query: 67 REEKKKQKKKKRREEEEAEEEEKK 90
R + + K R ++E+ K+
Sbjct: 1870 RRRSSRSRSKSRGRRSVSKEKRKR 1893
Score = 39.7 bits (91), Expect = 5e-04
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+ RR RSS S S S S S+ +R+R + R + R R+R+R + +K + + R
Sbjct: 1866 RSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSR 1923
Score = 37.0 bits (84), Expect = 0.003
Identities = 17/69 (24%), Positives = 28/69 (40%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
KK + R + SS S S+R + + R+R R R R+R K K + + R
Sbjct: 1804 KKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRS 1863
Query: 81 EEEAEEEEK 89
+ +
Sbjct: 1864 RSRSRRRRR 1872
Score = 36.6 bits (83), Expect = 0.004
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+ + RSRS S SS S S R RR + +R+R + R + R ++K+ + R+
Sbjct: 1858 RSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKT 1917
Query: 82 EEA 84
A
Sbjct: 1918 VRA 1920
Score = 36.6 bits (83), Expect = 0.004
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRR--RREEKKKQKK 75
T + RR R SS S S S S + +R+R + R + R R+R+R R+ +K +
Sbjct: 1861 TRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRA 1920
Query: 76 KKR 78
+ R
Sbjct: 1921 RSR 1923
Score = 35.0 bits (79), Expect = 0.013
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRR-------RRRRRRRRRRRREEK 70
TP ++ R+ S S + S S + SRRRR R RRR R RR R RRR +
Sbjct: 1973 TPSRRS--RTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSR 2030
Query: 71 KKQKKKKRREEEEAEEEEK 89
++K+ R E ++
Sbjct: 2031 SPIRRKRSRSSERGRSPKR 2049
Score = 34.3 bits (77), Expect = 0.022
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 18 TPEKKEE---RRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQK 74
TP ++ RR RS S S S S R RR R RRR R RR+R R ++ +
Sbjct: 1987 TPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRS 2046
Query: 75 KKKRREEEEAE 85
K+ + ++A+
Sbjct: 2047 PKRLTDLDKAQ 2057
Score = 33.5 bits (75), Expect = 0.037
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 15 FTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQK 74
F+++P ++ R+ S S + S S + SRR R RR R RR R RRR + +
Sbjct: 1949 FSISPSRRS--RTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVR 2006
Query: 75 KK 76
++
Sbjct: 2007 RR 2008
Score = 33.1 bits (74), Expect = 0.048
Identities = 19/64 (29%), Positives = 25/64 (39%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
K RRS S S S SR R+R+R R R+ R R R + + RR
Sbjct: 1879 KSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRR 1938
Query: 81 EEEA 84
+
Sbjct: 1939 RSRS 1942
Score = 32.7 bits (73), Expect = 0.063
Identities = 19/71 (26%), Positives = 30/71 (42%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+ +E +R RSSS + + + S RR R RRRR R RRR ++ R
Sbjct: 1900 KSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRT 1959
Query: 80 EEEEAEEEEKK 90
+ ++
Sbjct: 1960 PSRRSRTPSRR 1970
Score = 32.3 bits (72), Expect = 0.082
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRR-----RRRRRRRRRRRREEKKKQK 74
+ ++ R+RS + S S S + S RRR R RRR RR R RR R ++ +
Sbjct: 1913 DNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSR 1972
Query: 75 KKKRR 79
RR
Sbjct: 1973 TPSRR 1977
Score = 32.0 bits (71), Expect = 0.11
Identities = 9/36 (25%), Positives = 28/36 (77%)
Query: 54 RRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEEEK 89
++ ++ ++ + +++++KK+++KK +R+ EE+E + K
Sbjct: 106 KKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESKTK 141
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRR---RRRRRRRREEKKKQK 74
T EK ++ ++R SS SR +R + + R+R R R R+R + K +
Sbjct: 1799 THEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHR 1858
Query: 75 KKKR 78
+ R
Sbjct: 1859 SQTR 1862
Score = 30.4 bits (67), Expect = 0.31
Identities = 9/34 (26%), Positives = 25/34 (73%)
Query: 57 RRRRRRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
++ ++ ++ + ++KKK+K+K+++ + + EE E K
Sbjct: 106 KKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESK 139
Score = 29.3 bits (64), Expect = 0.69
Identities = 8/30 (26%), Positives = 24/30 (80%)
Query: 53 RRRRRRRRRRRRRRREEKKKQKKKKRREEE 82
++ ++ ++ + ++++++K+K+KK KR+ EE
Sbjct: 106 KKSKKHKKHKNKKKKKKKEKEKKYKRQPEE 135
Score = 29.3 bits (64), Expect = 0.69
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++K +R + S S SSSR R+ R R R RR R ++ + +RR
Sbjct: 1888 KEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRR 1947
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/91 (15%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 7 VTSAPSTCFTLTPEKKEE-------RRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRR 59
V+S P + E+K++ + + S + + ++R R R +R +
Sbjct: 1772 VSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKS 1831
Query: 60 RRRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
+ R+R + + + +KR + ++ + +
Sbjct: 1832 SEHKSRKRTSESRSRARKRSSKSKSHRSQTR 1862
Score = 27.3 bits (59), Expect = 2.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 16 TLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRR-----RRRRRREEK 70
+++ EK++ S S SSS R+ R R R RR R RRRR R
Sbjct: 1885 SVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVG 1944
Query: 71 KKQ 73
+++
Sbjct: 1945 RRR 1947
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 52.0 bits (123), Expect = 1e-07
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRR------RRRREEKKKQK 74
KK+ RS SSSSSS SSSSSS S +++ +RR++++ R + E K+
Sbjct: 98 KKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESV 157
Query: 75 KKKRREEEEAEEEE 88
KKK++ ++E E+E+
Sbjct: 158 KKKKKSKDETEKEK 171
Score = 41.6 bits (96), Expect = 1e-04
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 21 KKEERRSRSSSSS--SSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKR 78
KK ER+ + S SSSSSSSS S +++ +RR++++ R K Q
Sbjct: 89 KKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHE 148
Query: 79 REEEEAEEEEKK 90
E E E +KK
Sbjct: 149 SESESKESVKKK 160
Score = 37.7 bits (86), Expect = 0.002
Identities = 15/50 (30%), Positives = 31/50 (62%)
Query: 30 SSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
SS SSS S + +++RR R + + + +++++++ KK KKKK++
Sbjct: 191 SSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQHKKHSKKKKKK 240
Score = 36.6 bits (83), Expect = 0.004
Identities = 16/60 (26%), Positives = 34/60 (56%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
KK + SS SSS S + +++RR R + + + +++++++ KK KKK+++
Sbjct: 181 KKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQHKKHSKKKKKK 240
Score = 36.2 bits (82), Expect = 0.006
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
K+ ++S SS SSS S + +++RR R + + + +++KKKQ KK +++
Sbjct: 178 KKRKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQHKKHSKKK 237
Query: 82 EEAEEEEKK 90
++ K
Sbjct: 238 KKKSGSSHK 246
Score = 35.0 bits (79), Expect = 0.013
Identities = 16/69 (23%), Positives = 37/69 (53%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
KK ++ SS SSS S + +++RR R + + + ++++KK+ KK +++
Sbjct: 178 KKRKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQHKKHSKKK 237
Query: 81 EEEAEEEEK 89
++++ K
Sbjct: 238 KKKSGSSHK 246
Score = 29.6 bits (65), Expect = 0.53
Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 12/82 (14%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR- 79
KK+ ++ S + + + ++ + R + ++RE KKK+KKK R
Sbjct: 45 KKQLENKKTGSKALAEFEEKMNENWKKELEKSREKLLSGNESSSKKRERKKKRKKKSCRS 104
Query: 80 -----------EEEEAEEEEKK 90
++E+EEKK
Sbjct: 105 SSSSSSSDSSSSSSDSEDEEKK 126
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 51.2 bits (121), Expect = 2e-07
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKR- 78
E+++ RSRS SS +S S SR +R R R RRR R R RRR R ++ ++K + R
Sbjct: 288 ERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRS 347
Query: 79 REEEEAEEEEKK 90
R+ ++ ++K
Sbjct: 348 RDRRRSKSRDRK 359
Score = 47.8 bits (112), Expect = 2e-06
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+E RRSRS S S S + R R R RRR + R R+ + R + + +++ +K +E+
Sbjct: 320 RERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEK 379
Query: 82 EEAEEEEKK 90
E+ ++KK
Sbjct: 380 EKRGSDDKK 388
Score = 45.8 bits (107), Expect = 7e-06
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 21/91 (23%)
Query: 21 KKEERRSRSSSSSSSSSSSS------------SSSRRRRRRRRRRRRRRR---------R 59
+ ERR RS S S SS +S S SR RRR R R RRR R R
Sbjct: 285 RDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHR 344
Query: 60 RRRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
R R RRR + + +K K R + E+++K
Sbjct: 345 SRSRDRRRSKSRDRKSYKHRSKSRDREQDRK 375
Score = 45.4 bits (106), Expect = 9e-06
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 26 RSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAE 85
RSR S S S S R R+ R R R RRR + R R+ K + K + R ++ +++
Sbjct: 318 RSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSK 377
Query: 86 EEEKK 90
E+EK+
Sbjct: 378 EKEKR 382
Score = 44.7 bits (104), Expect = 2e-05
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
++ +RSRS S S SR R R+ R R R RRR + R + K + K R E
Sbjct: 312 RDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDRE 371
Query: 82 EEAEEEEKK 90
++ + +EK+
Sbjct: 372 QDRKSKEKE 380
Score = 44.3 bits (103), Expect = 2e-05
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E KE+ R R+ R R + R R R R R+RRR EE++K++ + R
Sbjct: 229 ELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRE 288
Query: 80 EEEEAEEEEK 89
+ + +
Sbjct: 289 RRKRSRSRSR 298
Score = 40.4 bits (93), Expect = 3e-04
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T E+ +E+ + + + R R + R R R R R+RRR EE++++++ +
Sbjct: 226 TVEELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERAR 285
Query: 78 RREEEEAEEEEKK 90
RE + +
Sbjct: 286 DRERRKRSRSRSR 298
Score = 40.0 bits (92), Expect = 4e-04
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E++E+ R+R S S S S R RR R R +R R R RRR + +++ +
Sbjct: 277 EEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSH 336
Query: 80 EEEEAEEEEK 89
+ E + +
Sbjct: 337 DRSERKHRSR 346
Score = 38.5 bits (88), Expect = 0.001
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRR---RRREEKKKQKKKKR 78
++ RRSRS S S S RRR + R R+ + R + R R R+ +EK+K+ +
Sbjct: 328 RDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDK 387
Query: 79 REEEEAEEEEKK 90
+ ++ EK+
Sbjct: 388 KSSVKSGSREKQ 399
Score = 36.2 bits (82), Expect = 0.006
Identities = 15/71 (21%), Positives = 27/71 (38%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK +R R + R R R R R+RRR RE+++ + +++R+
Sbjct: 232 EKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRK 291
Query: 80 EEEEAEEEEKK 90
+
Sbjct: 292 RSRSRSRHSSR 302
Score = 36.2 bits (82), Expect = 0.006
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRR---------RRRRRRRRRRRRRRREEK 70
E++E R R + RR+R R R RR R R +R R RE +
Sbjct: 264 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERR 323
Query: 71 KKQKKKKRREEEEAEEEEK 89
+ + + +RR E K
Sbjct: 324 RSRSRDRRRSRSHDRSERK 342
Score = 36.2 bits (82), Expect = 0.006
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+++ER S S S SSR RR R R +R R R RRR + +++ +
Sbjct: 278 EREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHD 337
Query: 80 EEEEAEEEEKK 90
E +
Sbjct: 338 RSERKHRSRSR 348
Score = 35.4 bits (80), Expect = 0.010
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKR- 78
++K+ER R RR R + R R R RR+R R R + +R
Sbjct: 249 KEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRC 308
Query: 79 ---REEEEAEEEEKK 90
R+ + + E++
Sbjct: 309 SRSRDHKRSRSRERR 323
Score = 33.5 bits (75), Expect = 0.037
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 17/88 (19%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRR-RRRRRRRRRRRR---------------- 62
E++E+ R R R + R R R RR+R R R R
Sbjct: 255 EEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDH 314
Query: 63 RRRRREEKKKQKKKKRREEEEAEEEEKK 90
+R R E+++ + + RR + E+K
Sbjct: 315 KRSRSRERRRSRSRDRRRSRSHDRSERK 342
Score = 33.1 bits (74), Expect = 0.048
Identities = 15/69 (21%), Positives = 26/69 (37%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
KKE++ +RRR R + R R R RR+R R + + R
Sbjct: 248 KKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRR 307
Query: 81 EEEAEEEEK 89
+ + ++
Sbjct: 308 CSRSRDHKR 316
Score = 33.1 bits (74), Expect = 0.048
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+K+++ R RRR R + R R R RR+R R + + RR
Sbjct: 248 KKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRR 307
Score = 32.7 bits (73), Expect = 0.063
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+K RSR S S S + R + R R + R+ + + +R ++KK K R
Sbjct: 340 ERKHRSRSR---DRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSR 396
Query: 80 EE--EEAEEEEKK 90
E+ E+ E K+
Sbjct: 397 EKQSEDTNTESKE 409
Score = 32.3 bits (72), Expect = 0.082
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 15/84 (17%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRR----RRRRRRRRRRRRRRRR-----------RR 66
K+E++ R R+RRR R + R R R RR+R R RR
Sbjct: 248 KKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRR 307
Query: 67 REEKKKQKKKKRREEEEAEEEEKK 90
+ K+ + RE + +++
Sbjct: 308 CSRSRDHKRSRSRERRRSRSRDRR 331
Score = 32.0 bits (71), Expect = 0.11
Identities = 13/61 (21%), Positives = 23/61 (37%)
Query: 16 TLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKK 75
T P++ E + R R+RRR R + R R R R ++ + +
Sbjct: 238 TEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRS 297
Query: 76 K 76
+
Sbjct: 298 R 298
Score = 31.6 bits (70), Expect = 0.14
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRR----RRRRRRRRRRRRRREEKKKQKKKK 77
++ER + R R R+RRR R + R R R RR+R + + +
Sbjct: 243 RDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSR 302
Query: 78 RREEEEAEEEEKK 90
+ + + K
Sbjct: 303 TSDRRCSRSRDHK 315
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 51.2 bits (121), Expect = 2e-07
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKR- 78
E+++ RSRS SS +S S SR +R R R RRR R R RRR R ++ ++K + R
Sbjct: 288 ERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRS 347
Query: 79 REEEEAEEEEKK 90
R+ ++ ++K
Sbjct: 348 RDRRRSKSRDRK 359
Score = 47.8 bits (112), Expect = 2e-06
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+E RRSRS S S S + R R R RRR + R R+ + R + + +++ +K +E+
Sbjct: 320 RERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEK 379
Query: 82 EEAEEEEKK 90
E+ ++KK
Sbjct: 380 EKRGSDDKK 388
Score = 45.8 bits (107), Expect = 7e-06
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 21/91 (23%)
Query: 21 KKEERRSRSSSSSSSSSSSS------------SSSRRRRRRRRRRRRRRR---------R 59
+ ERR RS S S SS +S S SR RRR R R RRR R R
Sbjct: 285 RDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHR 344
Query: 60 RRRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
R R RRR + + +K K R + E+++K
Sbjct: 345 SRSRDRRRSKSRDRKSYKHRSKSRDREQDRK 375
Score = 45.4 bits (106), Expect = 9e-06
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 26 RSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAE 85
RSR S S S S R R+ R R R RRR + R R+ K + K + R ++ +++
Sbjct: 318 RSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSK 377
Query: 86 EEEKK 90
E+EK+
Sbjct: 378 EKEKR 382
Score = 44.7 bits (104), Expect = 2e-05
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
++ +RSRS S S SR R R+ R R R RRR + R + K + K R E
Sbjct: 312 RDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDRE 371
Query: 82 EEAEEEEKK 90
++ + +EK+
Sbjct: 372 QDRKSKEKE 380
Score = 44.3 bits (103), Expect = 2e-05
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E KE+ R R+ R R + R R R R R+RRR EE++K++ + R
Sbjct: 229 ELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRE 288
Query: 80 EEEEAEEEEK 89
+ + +
Sbjct: 289 RRKRSRSRSR 298
Score = 40.4 bits (93), Expect = 3e-04
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T E+ +E+ + + + R R + R R R R R+RRR EE++++++ +
Sbjct: 226 TVEELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERAR 285
Query: 78 RREEEEAEEEEKK 90
RE + +
Sbjct: 286 DRERRKRSRSRSR 298
Score = 40.0 bits (92), Expect = 4e-04
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E++E+ R+R S S S S R RR R R +R R R RRR + +++ +
Sbjct: 277 EEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSH 336
Query: 80 EEEEAEEEEK 89
+ E + +
Sbjct: 337 DRSERKHRSR 346
Score = 38.5 bits (88), Expect = 0.001
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRR---RRREEKKKQKKKKR 78
++ RRSRS S S S RRR + R R+ + R + R R R+ +EK+K+ +
Sbjct: 328 RDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDK 387
Query: 79 REEEEAEEEEKK 90
+ ++ EK+
Sbjct: 388 KSSVKSGSREKQ 399
Score = 36.2 bits (82), Expect = 0.006
Identities = 15/71 (21%), Positives = 27/71 (38%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK +R R + R R R R R+RRR RE+++ + +++R+
Sbjct: 232 EKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRK 291
Query: 80 EEEEAEEEEKK 90
+
Sbjct: 292 RSRSRSRHSSR 302
Score = 36.2 bits (82), Expect = 0.006
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRR---------RRRRRRRRRRRRRRREEK 70
E++E R R + RR+R R R RR R R +R R RE +
Sbjct: 264 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERR 323
Query: 71 KKQKKKKRREEEEAEEEEK 89
+ + + +RR E K
Sbjct: 324 RSRSRDRRRSRSHDRSERK 342
Score = 36.2 bits (82), Expect = 0.006
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+++ER S S S SSR RR R R +R R R RRR + +++ +
Sbjct: 278 EREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHD 337
Query: 80 EEEEAEEEEKK 90
E +
Sbjct: 338 RSERKHRSRSR 348
Score = 35.4 bits (80), Expect = 0.010
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKR- 78
++K+ER R RR R + R R R RR+R R R + +R
Sbjct: 249 KEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRC 308
Query: 79 ---REEEEAEEEEKK 90
R+ + + E++
Sbjct: 309 SRSRDHKRSRSRERR 323
Score = 33.5 bits (75), Expect = 0.037
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 17/88 (19%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRR-RRRRRRRRRRRR---------------- 62
E++E+ R R R + R R R RR+R R R R
Sbjct: 255 EEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDH 314
Query: 63 RRRRREEKKKQKKKKRREEEEAEEEEKK 90
+R R E+++ + + RR + E+K
Sbjct: 315 KRSRSRERRRSRSRDRRRSRSHDRSERK 342
Score = 33.1 bits (74), Expect = 0.048
Identities = 15/69 (21%), Positives = 26/69 (37%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
KKE++ +RRR R + R R R RR+R R + + R
Sbjct: 248 KKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRR 307
Query: 81 EEEAEEEEK 89
+ + ++
Sbjct: 308 CSRSRDHKR 316
Score = 33.1 bits (74), Expect = 0.048
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+K+++ R RRR R + R R R RR+R R + + RR
Sbjct: 248 KKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRR 307
Score = 32.7 bits (73), Expect = 0.063
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+K RSR S S S + R + R R + R+ + + +R ++KK K R
Sbjct: 340 ERKHRSRSR---DRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSR 396
Query: 80 EE--EEAEEEEKK 90
E+ E+ E K+
Sbjct: 397 EKQSEDTNTESKE 409
Score = 32.3 bits (72), Expect = 0.082
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 15/84 (17%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRR----RRRRRRRRRRRRRRRR-----------RR 66
K+E++ R R+RRR R + R R R RR+R R RR
Sbjct: 248 KKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRR 307
Query: 67 REEKKKQKKKKRREEEEAEEEEKK 90
+ K+ + RE + +++
Sbjct: 308 CSRSRDHKRSRSRERRRSRSRDRR 331
Score = 32.0 bits (71), Expect = 0.11
Identities = 13/61 (21%), Positives = 23/61 (37%)
Query: 16 TLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKK 75
T P++ E + R R+RRR R + R R R R ++ + +
Sbjct: 238 TEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRS 297
Query: 76 K 76
+
Sbjct: 298 R 298
Score = 31.6 bits (70), Expect = 0.14
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRR----RRRRRRRRRRRRRREEKKKQKKKK 77
++ER + R R R+RRR R + R R R RR+R + + +
Sbjct: 243 RDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSR 302
Query: 78 RREEEEAEEEEKK 90
+ + + K
Sbjct: 303 TSDRRCSRSRDHK 315
>gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo
sapiens]
Length = 437
Score = 50.4 bits (119), Expect = 3e-07
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+++ ERR RS S SR RRRR R R + RRR R R + +++ ++++ R
Sbjct: 236 DRERERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRS 295
Query: 80 EEEEAEEEEKK 90
E E E+K
Sbjct: 296 RERARRERERK 306
Score = 44.7 bits (104), Expect = 2e-05
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 23 EERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEE 82
+ER S RR R R R + R RRR R R RRR + + K+++RR E
Sbjct: 220 DERPGPSPLPHRDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRE 279
Query: 83 EAEEEEK 89
++++++
Sbjct: 280 RSKDKDR 286
Score = 44.7 bits (104), Expect = 2e-05
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRR----RRRRRRRRRRRRRRRREEKKKQKK 75
E++ RSR S S RRRR R R RRR R R + + R R+ + ++
Sbjct: 238 ERERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRE 297
Query: 76 KKRREEEEAEE 86
+ RRE E EE
Sbjct: 298 RARRERERKEE 308
Score = 43.5 bits (101), Expect = 4e-05
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 19 PEKKEER-RSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
P + +R R R S RR R R RRRR R R + RRR RE K + + +
Sbjct: 229 PHRDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDR 288
Query: 78 RREEEEAEEEEKK 90
+R + E ++
Sbjct: 289 KRRSSRSRERARR 301
Score = 39.3 bits (90), Expect = 7e-04
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 28 RSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEE 87
R +S S R R R R R RR R R R + RE ++ + + +RR ++E
Sbjct: 213 RDDTSRYDERPGPSPLPHRDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKE 272
Query: 88 EKK 90
E++
Sbjct: 273 ERR 275
Score = 39.3 bits (90), Expect = 7e-04
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRR--------RRRRRRRRRRRRRRRRREEKK 71
+++E RRSRS S S RRR R R +RR R R R RR R R+E+
Sbjct: 250 KERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERARRERERKEEL 309
Query: 72 KQKKKKRREEEEA 84
+ E EA
Sbjct: 310 RGGGGDMAEPSEA 322
Score = 35.4 bits (80), Expect = 0.010
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 44 RRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEEEK 89
R R R RRR R R RRR R R ++ ++ K+ R E +E +
Sbjct: 348 RDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEAR 393
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 50.4 bits (119), Expect = 3e-07
Identities = 22/74 (29%), Positives = 44/74 (59%)
Query: 17 LTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKK 76
L +KKEE + R ++ + + + RR + RR + RR + RR + RRE++++ ++
Sbjct: 663 LLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQ 722
Query: 77 KRREEEEAEEEEKK 90
+RR E+E + E++
Sbjct: 723 ERRREQERLQAERE 736
Score = 39.3 bits (90), Expect = 7e-04
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 14/73 (19%)
Query: 17 LTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKK 76
L ++++ERR + RR + RR + RR + RR + R+ E++++++++
Sbjct: 684 LAEQREQERREQ--------------ERREQERREQERREQERREQERQLAEQERRREQE 729
Query: 77 KRREEEEAEEEEK 89
+ + E E +E EK
Sbjct: 730 RLQAERELQEREK 742
Score = 37.7 bits (86), Expect = 0.002
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T + KEER + + +++ RR++ RR R ++ RR ++ QKKK+
Sbjct: 610 TEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKE 669
Query: 78 RREEEEAEEEEKK 90
+E + E K
Sbjct: 670 EEQERLRKAAEAK 682
Score = 37.7 bits (86), Expect = 0.002
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK-- 77
+++EE R R+ +R +R + RR + RR +E+++Q++++
Sbjct: 652 QQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQE 711
Query: 78 RREEEE--AEEEEKK 90
RRE+E AE+E ++
Sbjct: 712 RREQERQLAEQERRR 726
Score = 36.2 bits (82), Expect = 0.006
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 16/106 (15%)
Query: 1 MQRGEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRR------RRRRRRR 54
++R + P F ++ E R + +RRR +R R R
Sbjct: 520 IKRNTPLRMDPKCSFVEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLR 579
Query: 55 RRRRRRRRRRRRREEKKKQ----------KKKKRREEEEAEEEEKK 90
+ + R R + +EEKKKQ K +K +EE AEE+ KK
Sbjct: 580 KVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKK 625
Score = 32.7 bits (73), Expect = 0.063
Identities = 15/71 (21%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+++E RR R ++++ + R R+ +R +RE+++++++ RR
Sbjct: 641 QEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQE--RR 698
Query: 80 EEEEAEEEEKK 90
E+E E+E ++
Sbjct: 699 EQERREQERRE 709
Score = 31.6 bits (70), Expect = 0.14
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 8 TSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRR-- 65
TSAP + ++ R S + RR+ + RR++ +RRR
Sbjct: 509 TSAPRSVMKSFIKRNTPLRMDPKCSFVEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLE 568
Query: 66 ----RREEKKKQKKKKRREEEEAEEEEKK 90
+REE+ ++ + R E+ +EE+KK
Sbjct: 569 EVKLKREERLRKVLQARERVEQMKEEKKK 597
Score = 29.6 bits (65), Expect = 0.53
Identities = 15/87 (17%), Positives = 38/87 (43%)
Query: 2 QRGEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRR 61
+R V A + EKK++ + + + + + +++ ++
Sbjct: 576 ERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEV 635
Query: 62 RRRRRREEKKKQKKKKRREEEEAEEEE 88
RR++EE+ ++ + ++EEEE +E
Sbjct: 636 EARRKQEEEARRLRWLQQEEEERRHQE 662
Score = 29.3 bits (64), Expect = 0.69
Identities = 13/72 (18%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRR---RRRREEKKKQKKK 76
E++E+ R + + R + R + R ++ + +R ++++EE+++ ++
Sbjct: 711 ERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAER 770
Query: 77 KRREEEEAEEEE 88
+ +EE+E + +E
Sbjct: 771 QLQEEQEKKAKE 782
Score = 28.1 bits (61), Expect = 1.5
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR---RRRRRRREEKKKQKKK 76
E+ E +R S + S + RR++RR + R RRR RR+ + Q
Sbjct: 39 EEAERMFTREFSKEPELMPKTPSQKNRRKKRRISYVQDENRDPIRRRLSRRKSRSSQLSS 98
Query: 77 KRREEEEAEEE 87
+R +++ E+
Sbjct: 99 RRLRSKDSVEK 109
Score = 27.7 bits (60), Expect = 2.0
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 23 EERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRR----RREEKKKQKKKKR 78
+E+ ++ + + + ++ RR++ RR R EE++ Q+ ++
Sbjct: 607 DEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQK 666
Query: 79 REEEEAEEEEK 89
++EEE E K
Sbjct: 667 KKEEEQERLRK 677
Score = 26.2 bits (56), Expect = 5.9
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 17/87 (19%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQK------ 74
K+EER + + +++ ++ + + + + R EEK K+K
Sbjct: 573 KREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKM 632
Query: 75 ---KKKRREEEEA--------EEEEKK 90
+ +R++EEEA EEEE++
Sbjct: 633 EEVEARRKQEEEARRLRWLQQEEEERR 659
Score = 25.4 bits (54), Expect = 10.0
Identities = 9/70 (12%), Positives = 34/70 (48%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+K+++ + + + + R + +++ ++ RR++E++ ++ + +
Sbjct: 593 EEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQ 652
Query: 80 EEEEAEEEEK 89
+EEE ++
Sbjct: 653 QEEEERRHQE 662
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 50.4 bits (119), Expect = 3e-07
Identities = 22/74 (29%), Positives = 44/74 (59%)
Query: 17 LTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKK 76
L +KKEE + R ++ + + + RR + RR + RR + RR + RRE++++ ++
Sbjct: 659 LLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQ 718
Query: 77 KRREEEEAEEEEKK 90
+RR E+E + E++
Sbjct: 719 ERRREQERLQAERE 732
Score = 39.3 bits (90), Expect = 7e-04
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 14/73 (19%)
Query: 17 LTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKK 76
L ++++ERR + RR + RR + RR + RR + R+ E++++++++
Sbjct: 680 LAEQREQERREQ--------------ERREQERREQERREQERREQERQLAEQERRREQE 725
Query: 77 KRREEEEAEEEEK 89
+ + E E +E EK
Sbjct: 726 RLQAERELQEREK 738
Score = 37.7 bits (86), Expect = 0.002
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T + KEER + + +++ RR++ RR R ++ RR ++ QKKK+
Sbjct: 606 TEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKE 665
Query: 78 RREEEEAEEEEKK 90
+E + E K
Sbjct: 666 EEQERLRKAAEAK 678
Score = 37.7 bits (86), Expect = 0.002
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK-- 77
+++EE R R+ +R +R + RR + RR +E+++Q++++
Sbjct: 648 QQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQE 707
Query: 78 RREEEE--AEEEEKK 90
RRE+E AE+E ++
Sbjct: 708 RREQERQLAEQERRR 722
Score = 37.0 bits (84), Expect = 0.003
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 12 STCFTLTPEKKEERR-----SRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRR 66
+T + P++KE +R + + RRR + +R R R+ + R
Sbjct: 523 NTPLRMDPKEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARE 582
Query: 67 REEKKKQKKKKRREEEEAEEEEK 89
R E+ K++KKK+ E++ A+ +EK
Sbjct: 583 RVEQMKEEKKKQIEQKFAQIDEK 605
Score = 32.7 bits (73), Expect = 0.063
Identities = 15/71 (21%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+++E RR R ++++ + R R+ +R +RE+++++++ RR
Sbjct: 637 QEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQE--RR 694
Query: 80 EEEEAEEEEKK 90
E+E E+E ++
Sbjct: 695 EQERREQERRE 705
Score = 30.4 bits (67), Expect = 0.31
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 11 PSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEK 70
P F T ++ + + +S+ S S + R + + R+R RR+ E+
Sbjct: 491 PLRTFLHTVQRNQMLMTPTSAPRSVMKSFIKRNTPLRMDPKEKERQRLENLRRKEEAEQL 550
Query: 71 KKQK----KKKRREEEEAEEEEK 89
++QK K++R EE + + EE+
Sbjct: 551 RRQKVEEDKRRRLEEVKLKREER 573
Score = 29.6 bits (65), Expect = 0.53
Identities = 15/87 (17%), Positives = 38/87 (43%)
Query: 2 QRGEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRR 61
+R V A + EKK++ + + + + + +++ ++
Sbjct: 572 ERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEV 631
Query: 62 RRRRRREEKKKQKKKKRREEEEAEEEE 88
RR++EE+ ++ + ++EEEE +E
Sbjct: 632 EARRKQEEEARRLRWLQQEEEERRHQE 658
Score = 29.3 bits (64), Expect = 0.69
Identities = 13/72 (18%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRR---RRRREEKKKQKKK 76
E++E+ R + + R + R + R ++ + +R ++++EE+++ ++
Sbjct: 707 ERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAER 766
Query: 77 KRREEEEAEEEE 88
+ +EE+E + +E
Sbjct: 767 QLQEEQEKKAKE 778
Score = 28.9 bits (63), Expect = 0.90
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 32 SSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
+S+ S S +R R + + R+R RR+EE ++ +++K E++ EE K
Sbjct: 509 TSAPRSVMKSFIKRNTPLRMDPKEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVK 567
Score = 28.1 bits (61), Expect = 1.5
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR---RRRRRRREEKKKQKKK 76
E+ E +R S + S + RR++RR + R RRR RR+ + Q
Sbjct: 39 EEAERMFTREFSKEPELMPKTPSQKNRRKKRRISYVQDENRDPIRRRLSRRKSRSSQLSS 98
Query: 77 KRREEEEAEEE 87
+R +++ E+
Sbjct: 99 RRLRSKDSVEK 109
Score = 28.1 bits (61), Expect = 1.5
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 17 LTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKK--QK 74
+TP +S ++ + R+R RR+ + RR++ E+K++ ++
Sbjct: 506 MTPTSAPRSVMKSFIKRNTPLRMDPKEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEE 565
Query: 75 KKKRREE------------EEAEEEEKK 90
K +REE E+ +EE+KK
Sbjct: 566 VKLKREERLRKVLQARERVEQMKEEKKK 593
Score = 27.7 bits (60), Expect = 2.0
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 23 EERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRR----RREEKKKQKKKKR 78
+E+ ++ + + + ++ RR++ RR R EE++ Q+ ++
Sbjct: 603 DEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQK 662
Query: 79 REEEEAEEEEK 89
++EEE E K
Sbjct: 663 KKEEEQERLRK 673
Score = 26.2 bits (56), Expect = 5.9
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 17/87 (19%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQK------ 74
K+EER + + +++ ++ + + + + R EEK K+K
Sbjct: 569 KREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKM 628
Query: 75 ---KKKRREEEEA--------EEEEKK 90
+ +R++EEEA EEEE++
Sbjct: 629 EEVEARRKQEEEARRLRWLQQEEEERR 655
Score = 25.4 bits (54), Expect = 10.0
Identities = 9/70 (12%), Positives = 34/70 (48%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+K+++ + + + + R + +++ ++ RR++E++ ++ + +
Sbjct: 589 EEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQ 648
Query: 80 EEEEAEEEEK 89
+EEE ++
Sbjct: 649 QEEEERRHQE 658
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 50.1 bits (118), Expect = 4e-07
Identities = 38/93 (40%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 8 TSAPSTCFTLTPEKKEERRSR--------------SSSSSSSSSSSSSSSRRRRRRRRRR 53
+S+ S +L+P K RRS SSSSSSSSSSSSSSS R R R
Sbjct: 1449 SSSRSRSRSLSPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSP 1508
Query: 54 RRRRRRRRRRRRRREEKKKQKKKKRREEEEAEE 86
RRR RRRR R Q+++ ++E EE
Sbjct: 1509 RRRSDRRRRYSSYRSHDHYQRQRVLQKERAIEE 1541
Score = 48.1 bits (113), Expect = 1e-06
Identities = 31/69 (44%), Positives = 39/69 (56%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+ R S SSSSSSSSSSSSSSS R R R RRR RRRR +++R +
Sbjct: 1475 RSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQRQRVLQ 1534
Query: 82 EEAEEEEKK 90
+E EE++
Sbjct: 1535 KERAIEERR 1543
Score = 40.0 bits (92), Expect = 4e-04
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 2 QRGEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRR 61
+R +S S + + S SSSSSSS S S S S RRR RRRR R
Sbjct: 1466 RRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRSHD 1525
Query: 62 RRRRRREEKKKQKKKKRR 79
+R+R +K++ ++RR
Sbjct: 1526 HYQRQRVLQKERAIEERR 1543
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 27 SRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRR 59
+R+S +SSSSSSSSSSSR R R +R RR
Sbjct: 1435 NRTSEASSSSSSSSSSSRSRSRSLSPPHKRWRR 1467
Score = 31.2 bits (69), Expect = 0.18
Identities = 21/43 (48%), Positives = 23/43 (53%)
Query: 25 RRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRR 67
R S +SSSSSSSSSSS S R +R RR R RR
Sbjct: 1436 RTSEASSSSSSSSSSSRSRSRSLSPPHKRWRRSSCSSSGRSRR 1478
Score = 30.4 bits (67), Expect = 0.31
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 27 SRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR 60
S +S +SSSSSSSSSS R R R +R RR
Sbjct: 1434 SNRTSEASSSSSSSSSSSRSRSRSLSPPHKRWRR 1467
Score = 26.6 bits (57), Expect = 4.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 16 TLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQ 73
T+ PE KE S S +S+++ R R RRRR++R+ EE+ Q
Sbjct: 721 TIIPEVKEV-----VDSLKIESGTSATTHEARPRPLSLSEYRRRRQQRQAETEERSPQ 773
>gi|24307919 small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
[Homo sapiens]
Length = 155
Score = 50.1 bits (118), Expect = 4e-07
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRR---RRRRRRRRRRRREEKKKQKKKK 77
++E RRSRS+S S R R RRR R R RRR R RR R + K+
Sbjct: 10 RRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKE 69
Query: 78 RREEEEAEEEEKK 90
RR+EE+ E +E K
Sbjct: 70 RRDEEKKETKETK 82
Score = 49.7 bits (117), Expect = 5e-07
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 26 RSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE---- 81
RSRS S S S+SR R RRRR R R R R RRR R R +++ + RR
Sbjct: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
Query: 82 -----EEAEEEEKK 90
+E +EEKK
Sbjct: 63 SPSRLKERRDEEKK 76
Score = 47.0 bits (110), Expect = 3e-06
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E++ RSRS S S S RRR R RR R R + RR+E+KK+ K+ +
Sbjct: 24 ERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKS 83
Query: 80 EEEEAEEEE 88
+E + EE+
Sbjct: 84 KERQITEED 92
Score = 45.1 bits (105), Expect = 1e-05
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRR-----RRRRRRRREEKKKQKK 75
++ ERR R S S S SR RRR R RR R R + RR EEKK+ K+
Sbjct: 21 RERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKE 80
Query: 76 KKRREEEEAEEE 87
K +E + EE+
Sbjct: 81 TKSKERQITEED 92
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 49.7 bits (117), Expect = 5e-07
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+++E + R + + R R+R R R R R R+R R R R E+++Q++ +R
Sbjct: 277 KERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERD 336
Query: 80 EEEEAEEEEKK 90
E+E E + K+
Sbjct: 337 REKERERKRKR 347
Score = 49.3 bits (116), Expect = 6e-07
Identities = 18/71 (25%), Positives = 40/71 (56%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+++++ R R + + R+R R+R R R R R R+R R E++++++++R
Sbjct: 273 DRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRE 332
Query: 80 EEEEAEEEEKK 90
E + E+E ++
Sbjct: 333 TERDREKERER 343
Score = 49.3 bits (116), Expect = 6e-07
Identities = 20/71 (28%), Positives = 40/71 (56%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+K+ ER++ + + +R R+R R R R R R+R R R RE +++++++ R
Sbjct: 276 QKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETER 335
Query: 80 EEEEAEEEEKK 90
+ E+ E ++K
Sbjct: 336 DREKERERKRK 346
Score = 49.3 bits (116), Expect = 6e-07
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T K++ R R + R R R R+R R R R R R R+R E+ ++K+++
Sbjct: 283 TDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERE 342
Query: 78 RREEEEAEEEEKK 90
R+ + + E + ++
Sbjct: 343 RKRKRQTEMDRER 355
Score = 48.9 bits (115), Expect = 8e-07
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+++E R R + R+R+RR R R R+R R+R RE ++++ +K+ R
Sbjct: 260 KERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRER 319
Query: 80 EEEEAEEEEKK 90
E E E E++
Sbjct: 320 ERERERERERQ 330
Score = 48.9 bits (115), Expect = 8e-07
Identities = 19/70 (27%), Positives = 40/70 (57%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+++ER ++ + + R+R R+R R R R R R+R R RE ++++++++ E
Sbjct: 275 RQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETE 334
Query: 81 EEEAEEEEKK 90
+ +E E+K
Sbjct: 335 RDREKERERK 344
Score = 48.1 bits (113), Expect = 1e-06
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++ +RR + + + R R R+R R+R R R R R R+ E++++++++R
Sbjct: 269 DRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERE 328
Query: 80 EEEEAEEEEKK 90
+ E E + +K
Sbjct: 329 RQRETERDREK 339
Score = 47.8 bits (112), Expect = 2e-06
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E++ ER + R+R+RR R R R+R R+R R E+++ +K++R
Sbjct: 261 ERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERE 320
Query: 80 EEEEAEEEEKK 90
E E E E ++
Sbjct: 321 RERERERERQR 331
Score = 47.4 bits (111), Expect = 2e-06
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++E R R + +R+RR R R R+R R+R R RE ++ +K+++ RE
Sbjct: 263 ERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERE 322
Query: 81 EEEAEEEEKK 90
E E +++
Sbjct: 323 RERERERQRE 332
Score = 47.0 bits (110), Expect = 3e-06
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 19 PEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRR---RRRRRREEKKKQKK 75
P +E R R + + R R++ R RRR +R+ R R+R RR EK + +K
Sbjct: 31 PGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRK 90
Query: 76 KKRREEEEAEEEEKK 90
+ R E + + E+++
Sbjct: 91 RDRHRERQRDREKER 105
Score = 47.0 bits (110), Expect = 3e-06
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E++ E+R + R R+R R R R+R R + R R+ E+ +Q++K+R
Sbjct: 63 ERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERN 122
Query: 80 EEEEAEEEEKK 90
++E E E ++
Sbjct: 123 RQKERERETER 133
Score = 47.0 bits (110), Expect = 3e-06
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T KE R R + R+R+RR R R R+R R+RE ++++++ +
Sbjct: 256 TERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNR 315
Query: 78 RREEEEAEEEEKK 90
+RE E E E++
Sbjct: 316 KRERERERERERE 328
Score = 46.6 bits (109), Expect = 4e-06
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+ ER S + R R R RR++ R R+ R+R+RR E+ ++ ++KR
Sbjct: 243 EKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRE 302
Query: 80 EEEEAEEEEKK 90
+ E E E ++
Sbjct: 303 RQRERERERER 313
Score = 46.6 bits (109), Expect = 4e-06
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++ ++ R + + R R+R R+R R R R R R+R E++++++++R+
Sbjct: 271 DRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQ 330
Query: 80 EEEEAEEEEKK 90
E E + E+++
Sbjct: 331 RETERDREKER 341
Score = 46.2 bits (108), Expect = 5e-06
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+KE R R + + RR + R R+R R R R+R R + RE + +++ ++RE
Sbjct: 59 QKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQRE 118
Query: 81 EEEAEEEEKK 90
+E ++E++
Sbjct: 119 KERNRQKERE 128
Score = 45.8 bits (107), Expect = 7e-06
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+ +E R + + + R+R RRR + R R+R R R R+R+ +K+++++ R
Sbjct: 52 DDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDR 111
Query: 80 EEEEAEEEEK 89
E + E+E+
Sbjct: 112 ERDRQREKER 121
Score = 45.8 bits (107), Expect = 7e-06
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+ ER+ + + + + RR+ R R R R R R+ R REE+++ + + R+
Sbjct: 338 EKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQ 397
Query: 80 EEEEAEEEEKK 90
+E E + E+ +
Sbjct: 398 KERERQTEKDR 408
Score = 45.1 bits (105), Expect = 1e-05
Identities = 18/71 (25%), Positives = 37/71 (52%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+++ R+ + + R+R RRR + R R+R R R R+R EK+++++ R
Sbjct: 53 DRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRE 112
Query: 80 EEEEAEEEEKK 90
+ + E+E +
Sbjct: 113 RDRQREKERNR 123
Score = 45.1 bits (105), Expect = 1e-05
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++K ER + +S + + R R R R R R RR++ R R+ ++K+Q++ +R
Sbjct: 235 QRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERD 294
Query: 80 EEEEAEEEEKK 90
E E + E ++
Sbjct: 295 RETERKRERQR 305
Score = 45.1 bits (105), Expect = 1e-05
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRR---RRRRRRRREEKKKQKKKK 77
+K+ R R+S + R R R R RR++ R R R+R+RR +++ ++K++
Sbjct: 243 EKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRE 302
Query: 78 RREEEEAEEEEKK 90
R+ E E E E +
Sbjct: 303 RQRERERERERNR 315
Score = 45.1 bits (105), Expect = 1e-05
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+K+ ER R+R+RR R R R+R R+R E+++++ +KR
Sbjct: 259 DKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRE 318
Query: 80 EEEEAEEEEKK 90
E E E E ++
Sbjct: 319 RERERERERER 329
Score = 44.7 bits (104), Expect = 2e-05
Identities = 18/70 (25%), Positives = 38/70 (54%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+++ER R + + RRR + R R+R R R R+R R + E++ +++ R+
Sbjct: 58 RQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQR 117
Query: 81 EEEAEEEEKK 90
E+E ++++
Sbjct: 118 EKERNRQKER 127
Score = 44.7 bits (104), Expect = 2e-05
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+ +R++ + +S R + R R R R R R RR++ E++ +K++RR
Sbjct: 231 ERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRR 290
Query: 80 EEEEAEEEEKK 90
E + E E K+
Sbjct: 291 TERDRETERKR 301
Score = 44.3 bits (103), Expect = 2e-05
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T K+E +R R R R+R R R R R R R+R R EK++++K+K
Sbjct: 297 TERKRERQRER----------ERERERNRKRERERERERERERQRETERDREKERERKRK 346
Query: 78 RREEEEAEEEEK 89
R+ E + E +
Sbjct: 347 RQTEMDRERNRQ 358
Score = 43.9 bits (102), Expect = 3e-05
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+K+ ERR + + R RRR + R R+R R R R+R R +E+++Q ++R
Sbjct: 59 QKERERRREKRQTERETDRK----RERRREKDRHRKRDRHRERQRDREKERERQTDRERD 114
Query: 80 EEEEAEEEEKK 90
+ E E +K
Sbjct: 115 RQREKERNRQK 125
Score = 43.9 bits (102), Expect = 3e-05
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++E R + R R RR++ R R+ R+R+RR R+ + ++K++++RE
Sbjct: 247 ERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRE 306
Query: 81 EEEAEEEEKK 90
E E +K
Sbjct: 307 RERERERNRK 316
Score = 43.5 bits (101), Expect = 4e-05
Identities = 18/70 (25%), Positives = 38/70 (54%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++E+R++ + R+R R R R+R R + R R+ RE ++++K++ R+
Sbjct: 65 RREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQ 124
Query: 81 EEEAEEEEKK 90
+E E E++
Sbjct: 125 KERERETERE 134
Score = 43.5 bits (101), Expect = 4e-05
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRR-------RRRRRRRRRRRRRREEKKK 72
+ ++ERR R + + S R R R R R R+R+ R R R+R+ E+++
Sbjct: 183 KNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTERER 242
Query: 73 QKKKKRREEEEAEEEEKK 90
+K+ +R E E E K
Sbjct: 243 EKQAERERASERETERDK 260
Score = 43.5 bits (101), Expect = 4e-05
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRR-----RRRRRRRRRRRRRRRRREEKKKQK 74
E++E R R + + S R R R R+R+ R R R+R+ E++KQ
Sbjct: 187 ERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQA 246
Query: 75 KKKRREEEEAEEEEKK 90
+++R E E E ++++
Sbjct: 247 ERERASERETERDKER 262
Score = 42.4 bits (98), Expect = 8e-05
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+ ER + RR++ R R+ R+R+RR R R E+K++++++R
Sbjct: 249 ERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERE 308
Query: 80 EEEEAEEEEKK 90
E E + ++
Sbjct: 309 RERERNRKRER 319
Score = 42.0 bits (97), Expect = 1e-04
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++E R R R R+R R + R R+ R R R+R +E+ +QK+++R
Sbjct: 72 ERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERET 131
Query: 81 EEEAE 85
E E E
Sbjct: 132 EREGE 136
Score = 42.0 bits (97), Expect = 1e-04
Identities = 16/71 (22%), Positives = 36/71 (50%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+ ++ER ++ + + R R + R+ RR R R+R + + E++ ++ ++R
Sbjct: 154 DAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERE 213
Query: 80 EEEEAEEEEKK 90
E E E E ++
Sbjct: 214 RERETETETER 224
Score = 41.6 bits (96), Expect = 1e-04
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQK------ 74
+KE R + R R R+R + R R+ R R+R+ E+ +QK
Sbjct: 124 QKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREK 183
Query: 75 -KKKRREEEEAEEEEKK 90
+++RRE E E+E K
Sbjct: 184 NRQERRERERQREKENK 200
Score = 41.2 bits (95), Expect = 2e-04
Identities = 17/70 (24%), Positives = 36/70 (51%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++E R R + R+R+R+ R R R+ R RR+ E++++++++R
Sbjct: 320 ERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDR 379
Query: 81 EEEAEEEEKK 90
+ E EE++
Sbjct: 380 QSAREREERE 389
Score = 40.8 bits (94), Expect = 2e-04
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 23 EERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEE 82
++R + R R+R RRR + R R+R R R ++ ++K+++R+ +
Sbjct: 52 DDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDR 111
Query: 83 EAEEEEKK 90
E + + +K
Sbjct: 112 ERDRQREK 119
Score = 40.8 bits (94), Expect = 2e-04
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK++ R R R R R+R R + R R+ R R +++K++ +++
Sbjct: 67 EKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKE 126
Query: 80 EEEEAEEEEKK 90
E E E E ++
Sbjct: 127 RERETEREGER 137
Score = 40.8 bits (94), Expect = 2e-04
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
EK+ ER++ + + R + R+ RR R R+R + + ++ ++++R
Sbjct: 156 EKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERE 215
Query: 80 EEEEAEEEEKK 90
E E E E K+
Sbjct: 216 RETETETERKR 226
Score = 40.4 bits (93), Expect = 3e-04
Identities = 16/70 (22%), Positives = 36/70 (51%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+++ER + + +R R R+R + R R+ R R+R+ ++ ++K++ RE
Sbjct: 123 RQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKERERE 182
Query: 81 EEEAEEEEKK 90
+ E E++
Sbjct: 183 KNRQERRERE 192
Score = 40.4 bits (93), Expect = 3e-04
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRR---RREEKKKQKKK 76
+K+ ER + + R R+R + R R+ R R+R R +K+++++K
Sbjct: 124 QKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREK 183
Query: 77 KRREEEEAEEEEKK 90
R+E E E + +K
Sbjct: 184 NRQERRERERQREK 197
Score = 40.4 bits (93), Expect = 3e-04
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRR---RRRRRRRRRRRRREEKKKQKKKK 77
K+E R R + + R R+R+R+ R R R+ R RR+ ++++++++
Sbjct: 316 KRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERER 375
Query: 78 RREEEEAEEEEKK 90
R+ + A E E++
Sbjct: 376 ERDRQSAREREER 388
Score = 40.0 bits (92), Expect = 4e-04
Identities = 16/70 (22%), Positives = 37/70 (52%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++E+ R+R + R R+ +R R R+R + R R+ ++++Q++ +R
Sbjct: 116 QREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNR 175
Query: 81 EEEAEEEEKK 90
++E E E+ +
Sbjct: 176 QKEREREKNR 185
Score = 40.0 bits (92), Expect = 4e-04
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRR----RRRRRRRRRRRRRRRREEKKKQKKK 76
++E R R + R R+R+R+ R R R+ R RR+ E+++++++
Sbjct: 318 ERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERER 377
Query: 77 KRREEEEAEEEEK 89
R+ E EE E+
Sbjct: 378 DRQSAREREERER 390
Score = 40.0 bits (92), Expect = 4e-04
Identities = 17/71 (23%), Positives = 37/71 (52%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
++++ER + + + + R RR+ R R R R R R+ RE +++++ + R
Sbjct: 336 DREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRD 395
Query: 80 EEEEAEEEEKK 90
++E E + +K
Sbjct: 396 RQKERERQTEK 406
Score = 39.7 bits (91), Expect = 5e-04
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
K E+R S + + + R+R+ R R R+R+ R R ++ E ++ +++ R+
Sbjct: 200 KTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERD 259
Query: 81 EEEAEEEEK 89
+E E ++
Sbjct: 260 KERERERDR 268
Score = 38.9 bits (89), Expect = 9e-04
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRR-RRRRRRRRRRRRRRRRREEKKKQKKK 76
T + E R R + + + R R+ R R+R+ R R++ R RE+ ++++++
Sbjct: 131 TEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRE 190
Query: 77 KRREEEEAEEEEKK 90
+ R+ E+ + E +
Sbjct: 191 RERQREKENKTEDR 204
Score = 38.9 bits (89), Expect = 9e-04
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKK 77
T ++E R R + + R+R+ R R++ R R + R+ RRE +++++K+
Sbjct: 143 TDGQRERERQRDAEKERERQTDRE---RQRQTERNRQKEREREKNRQERRERERQREKEN 199
Query: 78 RREEEEAEEEEKK 90
+ E+ +E ++
Sbjct: 200 KTEDRHSERGRER 212
Score = 38.5 bits (88), Expect = 0.001
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
++E R R+ R+R R R + R R+R+R+ E+ +Q ++ R
Sbjct: 306 ERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRR 365
Query: 81 EEEAEEEEKK 90
+ E E E ++
Sbjct: 366 QAERERERER 375
Score = 37.4 bits (85), Expect = 0.003
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+KE R + + R+ +R R R+R + R R+ E+++Q ++ R++
Sbjct: 118 EKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQK 177
Query: 81 EEEAEEEEKK 90
E E E+ ++
Sbjct: 178 EREREKNRQE 187
Score = 37.4 bits (85), Expect = 0.003
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+++ ER+ + R R R R R R+R R R + RE K+K++ + R
Sbjct: 294 DRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDR 353
Query: 80 EEEEAEEEE 88
E E
Sbjct: 354 ERNRQTGRE 362
Score = 37.4 bits (85), Expect = 0.003
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRR-----RRRRRRRRRRRRRRRRRRRRREEKKKQKK 75
++E R R + R+R R R R+ R RR+ R R RE ++ ++
Sbjct: 322 ERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQS 381
Query: 76 KKRREEEEAEEEEKK 90
+ REE E + + +
Sbjct: 382 AREREERERDRDRDR 396
Score = 37.0 bits (84), Expect = 0.003
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 18 TPEKKEER-RSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKK 76
T ++ ER R R + + + R R R+R+ R R ++ R R E++ ++ K
Sbjct: 201 TEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDK 260
Query: 77 KRREEEEAEEEEKK 90
+R E + + + +
Sbjct: 261 ERERERDRDRDRDR 274
Score = 36.6 bits (83), Expect = 0.004
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E K E R + + R+R+ R R R+R+ R R ++ E+++ +++
Sbjct: 198 ENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETE 257
Query: 80 EEEEAEEEEKK 90
++E E E +
Sbjct: 258 RDKERERERDR 268
Score = 36.2 bits (82), Expect = 0.006
Identities = 14/69 (20%), Positives = 31/69 (44%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+ R R + R+R + R R++ R R R R +++ +++R +
Sbjct: 93 RHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQ 152
Query: 82 EEAEEEEKK 90
+AE+E ++
Sbjct: 153 RDAEKERER 161
Score = 34.7 bits (78), Expect = 0.016
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+K +R + R R+R + R R++ R R R E + ++ +RE
Sbjct: 89 RKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRE 148
Query: 81 EEEAEEEEKK 90
E + EK+
Sbjct: 149 RERQRDAEKE 158
Score = 34.3 bits (77), Expect = 0.022
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRR-----RRRRRRRREEKKKQK 74
EK+ ER++ + R R R R R R R R R+R EK++++
Sbjct: 102 EKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERER 161
Query: 75 KKKRREEEEAEEEEKK 90
+ R + + E +K
Sbjct: 162 QTDRERQRQTERNRQK 177
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 49.3 bits (116), Expect = 6e-07
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 1 MQRGEAVTSAPSTCFTLTPEKKEER---RSRSSSSSSSSSSSSSSSRRRR-----RRRRR 52
M+R S S K ER RSRS + S S SSS S SRR+R R R
Sbjct: 279 MKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSH 338
Query: 53 RRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
R R R++ RRR + KK+ K ++RR+ K
Sbjct: 339 NRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDK 376
Score = 49.3 bits (116), Expect = 6e-07
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRR------RRRRRRRRRRRRRRRRREEKKKQK 74
K RR RS S S S + S SR++ RRR +R + R RR+ R R +K+K
Sbjct: 321 KSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT 380
Query: 75 KKKRREEEEAEEEEKK 90
++K +E+E +E++++
Sbjct: 381 REKIKEKERVKEKDRE 396
Score = 46.2 bits (108), Expect = 5e-06
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRRE---EKKKQKKKKR 78
+ RSRS S S R + R RR+ R R R +R+ RE EK++ K+K R
Sbjct: 336 RSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDR 395
Query: 79 REEEEAEEEEKK 90
+E E E+E +K
Sbjct: 396 EKEREREKEREK 407
Score = 45.1 bits (105), Expect = 1e-05
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR------RRRRRRREEKKKQ 73
++K++++SR+ S ++S S SS R RRRRR R R R R+ R + +
Sbjct: 470 KRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRN 529
Query: 74 KKKKRREEEEAEEEEKK 90
KK K+RE+E E++
Sbjct: 530 KKDKKREKERDHISERR 546
Score = 43.9 bits (102), Expect = 3e-05
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+ RS+S SSS S S S + R R R R R++ RRR + +K+ + +++R+
Sbjct: 309 RSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSR 368
Query: 82 EEAEEEEKK 90
+ +K+
Sbjct: 369 SRSHSRDKR 377
Score = 43.9 bits (102), Expect = 3e-05
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 26 RSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAE 85
+SRSSS S S S S R R R R R++ RRR + ++ K ++++K R +
Sbjct: 315 KSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSR 374
Query: 86 EEEK 89
++ K
Sbjct: 375 DKRK 378
Score = 42.4 bits (98), Expect = 8e-05
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRRE-EKKKQKKK 76
+P KK RS+S S S S S +R+ R + + + R + + R + RE EK+++K+K
Sbjct: 353 SPHKK---RSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEK 409
Query: 77 KRREEEEAEEEEKK 90
+R + ++ ++E +K
Sbjct: 410 ERGKNKDRDKEREK 423
Score = 42.0 bits (97), Expect = 1e-04
Identities = 17/71 (23%), Positives = 37/71 (52%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+++ER + R + + + R R R + + R +E++K+Q K+K R
Sbjct: 400 EREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKER 459
Query: 80 EEEEAEEEEKK 90
E++ ++E ++K
Sbjct: 460 EKDRSKEIDEK 470
Score = 41.6 bits (96), Expect = 1e-04
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKK---K 77
K ERR S S S + + + + R + + R + R R + R +EK++ K K K
Sbjct: 360 KSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDK 419
Query: 78 RREEEEAEEEEK 89
RE++ +++EK
Sbjct: 420 EREKDREKDKEK 431
Score = 40.8 bits (94), Expect = 2e-04
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRRE---EKKKQKKKK 77
+K+ RRS+S S S SR R R +R+ R + + + R +E EK+++++K+
Sbjct: 345 QKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE 404
Query: 78 RREEEE 83
R +E+E
Sbjct: 405 REKEKE 410
Score = 40.4 bits (93), Expect = 3e-04
Identities = 15/70 (21%), Positives = 35/70 (50%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+KE R + + + R + R + + + R R R + +++ K+K+K++ +
Sbjct: 396 EKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDK 455
Query: 81 EEEAEEEEKK 90
E+E E++ K
Sbjct: 456 EKEREKDRSK 465
Score = 39.3 bits (90), Expect = 7e-04
Identities = 15/70 (21%), Positives = 34/70 (48%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+KE + + + R + + + R R R + + R + +EK++ K+K+R +
Sbjct: 402 EKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREK 461
Query: 81 EEEAEEEEKK 90
+ E +EK+
Sbjct: 462 DRSKEIDEKR 471
Score = 38.5 bits (88), Expect = 0.001
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 21 KKEERRSRSSSSSSSSSSS----SSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKK 76
++ RRSRSSS S +S + SS S R R ++ ++R + R RRE ++ +
Sbjct: 496 ERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMR 555
Query: 77 KRREEEEAEEEEKK 90
K + + +E+ +K
Sbjct: 556 KSSNDRDGKEKLEK 569
Score = 38.1 bits (87), Expect = 0.001
Identities = 15/71 (21%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+KE+ R ++ + + R R R + + R + + + ++K+K+++K R +
Sbjct: 406 EKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSK 465
Query: 81 E-EEAEEEEKK 90
E +E +++KK
Sbjct: 466 EIDEKRKKDKK 476
Score = 37.4 bits (85), Expect = 0.003
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+E+ R R + R + R + R + + + R R R + EK + K+K E+
Sbjct: 395 REKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEK---EK 451
Query: 82 EEAEEEEKK 90
E+ +E+E++
Sbjct: 452 EQDKEKERE 460
Score = 36.6 bits (83), Expect = 0.004
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
KE+ R + + + R + R + R + + + R R EK+ +K + + +E
Sbjct: 391 KEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKE 450
Query: 82 EEAEEEEKK 90
+E ++E+++
Sbjct: 451 KEQDKEKER 459
Score = 35.0 bits (79), Expect = 0.013
Identities = 14/71 (19%), Positives = 35/71 (49%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+ +E+ + + R + R + R + + + R RE +K+ +K + +
Sbjct: 388 ERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDK 447
Query: 80 EEEEAEEEEKK 90
E+E+ +++EK+
Sbjct: 448 EKEKEQDKEKE 458
Score = 32.3 bits (72), Expect = 0.082
Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 22/93 (23%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRR------------- 66
+++E+ RS+ S + R RR R R RRRRR R
Sbjct: 457 KEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIK 516
Query: 67 ---------REEKKKQKKKKRREEEEAEEEEKK 90
R KK KK+++ + +E E++
Sbjct: 517 RKSSRSPSPRSRNKKDKKREKERDHISERRERE 549
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 49.3 bits (116), Expect = 6e-07
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 1 MQRGEAVTSAPSTCFTLTPEKKEER---RSRSSSSSSSSSSSSSSSRRRR-----RRRRR 52
M+R S S K ER RSRS + S S SSS S SRR+R R R
Sbjct: 163 MKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSH 222
Query: 53 RRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEEEEKK 90
R R R++ RRR + KK+ K ++RR+ K
Sbjct: 223 NRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDK 260
Score = 49.3 bits (116), Expect = 6e-07
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRR------RRRRRRRRRRRRRRRRREEKKKQK 74
K RR RS S S S + S SR++ RRR +R + R RR+ R R +K+K
Sbjct: 205 KSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT 264
Query: 75 KKKRREEEEAEEEEKK 90
++K +E+E +E++++
Sbjct: 265 REKIKEKERVKEKDRE 280
Score = 46.2 bits (108), Expect = 5e-06
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRRE---EKKKQKKKKR 78
+ RSRS S S R + R RR+ R R R +R+ RE EK++ K+K R
Sbjct: 220 RSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDR 279
Query: 79 REEEEAEEEEKK 90
+E E E+E +K
Sbjct: 280 EKEREREKEREK 291
Score = 45.1 bits (105), Expect = 1e-05
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR------RRRRRRREEKKKQ 73
++K++++SR+ S ++S S SS R RRRRR R R R R+ R + +
Sbjct: 354 KRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRN 413
Query: 74 KKKKRREEEEAEEEEKK 90
KK K+RE+E E++
Sbjct: 414 KKDKKREKERDHISERR 430
Score = 43.9 bits (102), Expect = 3e-05
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+ RS+S SSS S S S + R R R R R++ RRR + +K+ + +++R+
Sbjct: 193 RSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSR 252
Query: 82 EEAEEEEKK 90
+ +K+
Sbjct: 253 SRSHSRDKR 261
Score = 43.9 bits (102), Expect = 3e-05
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 26 RSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAE 85
+SRSSS S S S S R R R R R++ RRR + ++ K ++++K R +
Sbjct: 199 KSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSR 258
Query: 86 EEEK 89
++ K
Sbjct: 259 DKRK 262
Score = 42.4 bits (98), Expect = 8e-05
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 18 TPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRRE-EKKKQKKK 76
+P KK RS+S S S S S +R+ R + + + R + + R + RE EK+++K+K
Sbjct: 237 SPHKK---RSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEK 293
Query: 77 KRREEEEAEEEEKK 90
+R + ++ ++E +K
Sbjct: 294 ERGKNKDRDKEREK 307
Score = 42.0 bits (97), Expect = 1e-04
Identities = 17/71 (23%), Positives = 37/71 (52%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+++ER + R + + + R R R + + R +E++K+Q K+K R
Sbjct: 284 EREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKER 343
Query: 80 EEEEAEEEEKK 90
E++ ++E ++K
Sbjct: 344 EKDRSKEIDEK 354
Score = 41.6 bits (96), Expect = 1e-04
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKK---K 77
K ERR S S S + + + + R + + R + R R + R +EK++ K K K
Sbjct: 244 KSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDK 303
Query: 78 RREEEEAEEEEK 89
RE++ +++EK
Sbjct: 304 EREKDREKDKEK 315
Score = 40.8 bits (94), Expect = 2e-04
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRRE---EKKKQKKKK 77
+K+ RRS+S S S SR R R +R+ R + + + R +E EK+++++K+
Sbjct: 229 QKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE 288
Query: 78 RREEEE 83
R +E+E
Sbjct: 289 REKEKE 294
Score = 40.4 bits (93), Expect = 3e-04
Identities = 15/70 (21%), Positives = 35/70 (50%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+KE R + + + R + R + + + R R R + +++ K+K+K++ +
Sbjct: 280 EKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDK 339
Query: 81 EEEAEEEEKK 90
E+E E++ K
Sbjct: 340 EKEREKDRSK 349
Score = 39.3 bits (90), Expect = 7e-04
Identities = 15/70 (21%), Positives = 34/70 (48%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+KE + + + R + + + R R R + + R + +EK++ K+K+R +
Sbjct: 286 EKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREK 345
Query: 81 EEEAEEEEKK 90
+ E +EK+
Sbjct: 346 DRSKEIDEKR 355
Score = 38.5 bits (88), Expect = 0.001
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 21 KKEERRSRSSSSSSSSSSS----SSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKK 76
++ RRSRSSS S +S + SS S R R ++ ++R + R RRE ++ +
Sbjct: 380 ERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMR 439
Query: 77 KRREEEEAEEEEKK 90
K + + +E+ +K
Sbjct: 440 KSSNDRDGKEKLEK 453
Score = 38.1 bits (87), Expect = 0.001
Identities = 15/71 (21%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 21 KKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
+KE+ R ++ + + R R R + + R + + + ++K+K+++K R +
Sbjct: 290 EKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSK 349
Query: 81 E-EEAEEEEKK 90
E +E +++KK
Sbjct: 350 EIDEKRKKDKK 360
Score = 37.4 bits (85), Expect = 0.003
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+E+ R R + R + R + R + + + R R R + EK + K+K E+
Sbjct: 279 REKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEK---EK 335
Query: 82 EEAEEEEKK 90
E+ +E+E++
Sbjct: 336 EQDKEKERE 344
Score = 36.6 bits (83), Expect = 0.004
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
KE+ R + + + R + R + R + + + R R EK+ +K + + +E
Sbjct: 275 KEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKE 334
Query: 82 EEAEEEEKK 90
+E ++E+++
Sbjct: 335 KEQDKEKER 343
Score = 35.0 bits (79), Expect = 0.013
Identities = 14/71 (19%), Positives = 35/71 (49%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
E+ +E+ + + R + R + R + + + R RE +K+ +K + +
Sbjct: 272 ERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDK 331
Query: 80 EEEEAEEEEKK 90
E+E+ +++EK+
Sbjct: 332 EKEKEQDKEKE 342
Score = 32.3 bits (72), Expect = 0.082
Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 22/93 (23%)
Query: 20 EKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRR------------- 66
+++E+ RS+ S + R RR R R RRRRR R
Sbjct: 341 KEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIK 400
Query: 67 ---------REEKKKQKKKKRREEEEAEEEEKK 90
R KK KK+++ + +E E++
Sbjct: 401 RKSSRSPSPRSRNKKDKKREKERDHISERRERE 433
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 48.9 bits (115), Expect = 8e-07
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 17 LTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKK 76
L P+ ++ S+S +S ++ S+R R R RR + R R R R +E++++++K+
Sbjct: 536 LKPDSEDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKEREREKQ 595
Query: 77 KRREEEEAEEEEK 89
K +E E+ + K
Sbjct: 596 KLKESEKERDSAK 608
Score = 47.4 bits (111), Expect = 2e-06
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 27 SRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEAEE 86
S SS SS+S +S + +R R R RR + R RE +++++K++ RE+++ +E
Sbjct: 540 SEDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKE 599
Query: 87 EEKK 90
EK+
Sbjct: 600 SEKE 603
Score = 45.8 bits (107), Expect = 7e-06
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 23 EERRSRSSSSSSSSSSSSS--SSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRRE 80
E+ S+SS+S +S ++ S R R R RR + R R R R + +E++++K+K +
Sbjct: 541 EDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKES 600
Query: 81 EEEAEEEEKK 90
E+E + + K
Sbjct: 601 EKERDSAKDK 610
Score = 38.9 bits (89), Expect = 9e-04
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 1 MQRGEAVTSAPSTCFTLTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRR 60
++ G A+ + S+ T + K+E + S SS SS+S+ + + +R
Sbjct: 513 LRSGSALLQSQSS----TEDPKDEP-AELKPDSEDLSSQSSASKASQEDANEIKSKRDEE 567
Query: 61 RRRRRRREEKKKQKKKKRREEEEAEEEEK 89
R R RRE+++++++++ +E+E E++K
Sbjct: 568 ERERERREKEREREREREKEKEREREKQK 596
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 48.9 bits (115), Expect = 8e-07
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRR----RRRRRRRRRRRRRRRRREEKKKQKKKK 77
+E +R S + S S S+S S +RRR R RR R RR R R R RRR + + +++
Sbjct: 422 QEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQER 481
Query: 78 RREEEEAEEEEK 89
R E+E E +K
Sbjct: 482 RDREKERERRQK 493
Score = 48.9 bits (115), Expect = 8e-07
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 17 LTPEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKK 76
++ +K RS S S S S S SRR R RR R R R RRR R R +E++ ++K+
Sbjct: 428 MSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKE 487
Query: 77 KRREEE 82
+ R ++
Sbjct: 488 RERRQK 493
Score = 45.8 bits (107), Expect = 7e-06
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 23 EERRSRSSSSSSSSS---SSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRR 79
+ R+SRS S+S S S S S RR R RR R R R RRR R R ++++ ++K+R
Sbjct: 430 DNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERE 489
Query: 80 EEEEAEEEEK 89
++ + K
Sbjct: 490 RRQKGLPQVK 499
Score = 41.6 bits (96), Expect = 1e-04
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+ +R RS S S S S SR R R RRR R R + RR R +E +++QK + +
Sbjct: 441 RSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQVKP 500
Query: 82 EEA 84
E A
Sbjct: 501 ETA 503
Score = 37.4 bits (85), Expect = 0.003
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 22 KEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREE 81
+E +R+ +S+ RR R R R R RR R E+ + ++ RRE+
Sbjct: 991 RERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREK 1050
Query: 82 EEAEEEEK 89
EEA +EK
Sbjct: 1051 EEARGKEK 1058
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 46 RRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEA 84
R RR R R R R R RRE+++ + K+K + A
Sbjct: 1027 RNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRA 1065
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.115 0.284
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,831,728
Number of Sequences: 37866
Number of extensions: 219803
Number of successful extensions: 40179
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 145
Number of HSP's that attempted gapping in prelim test: 6813
Number of HSP's gapped (non-prelim): 16508
length of query: 90
length of database: 18,247,518
effective HSP length: 62
effective length of query: 28
effective length of database: 15,899,826
effective search space: 445195128
effective search space used: 445195128
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 54 (25.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.