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Search of human proteins with 239508698
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239508698 PREDICTED: similar to mucin [Homo sapiens]
(265 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239508698 PREDICTED: similar to mucin [Homo sapiens] 534 e-152
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 498 e-141
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 409 e-114
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 67 2e-11
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 59 3e-09
gi|30795231 brain abundant, membrane attached signal protein 1 [... 57 2e-08
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 56 3e-08
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 55 5e-08
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 55 6e-08
gi|153070260 myristoylated alanine-rich protein kinase C substra... 55 8e-08
gi|38788274 bromodomain PHD finger transcription factor isoform ... 55 8e-08
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 54 1e-07
gi|74272284 membrane associated guanylate kinase, WW and PDZ dom... 54 2e-07
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ... 52 5e-07
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 51 9e-07
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 51 1e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 51 1e-06
gi|71274172 ankyrin repeat domain 56 [Homo sapiens] 51 1e-06
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 50 2e-06
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 50 2e-06
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 50 2e-06
gi|239750916 PREDICTED: similar to hCG1803335 [Homo sapiens] 50 2e-06
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 50 2e-06
gi|50962882 G patch domain containing 8 [Homo sapiens] 50 3e-06
gi|60097902 filaggrin [Homo sapiens] 49 3e-06
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 49 3e-06
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 49 3e-06
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 49 3e-06
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 49 3e-06
gi|38788260 bromodomain PHD finger transcription factor isoform ... 49 5e-06
>gi|239508698 PREDICTED: similar to mucin [Homo sapiens]
Length = 265
Score = 534 bits (1375), Expect = e-152
Identities = 265/265 (100%), Positives = 265/265 (100%)
Query: 1 MKPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSAD 60
MKPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSAD
Sbjct: 1 MKPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSAD 60
Query: 61 QQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQ 120
QQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQ
Sbjct: 61 QQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQ 120
Query: 121 RRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSS 180
RRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSS
Sbjct: 121 RRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSS 180
Query: 181 PSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQR 240
PSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQR
Sbjct: 181 PSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQR 240
Query: 241 AQDREEEAAAAPAPTSSGHRTEKRK 265
AQDREEEAAAAPAPTSSGHRTEKRK
Sbjct: 241 AQDREEEAAAAPAPTSSGHRTEKRK 265
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 498 bits (1281), Expect = e-141
Identities = 250/265 (94%), Positives = 251/265 (94%)
Query: 1 MKPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSAD 60
MKPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSAD
Sbjct: 1 MKPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSAD 60
Query: 61 QQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQ 120
QQGAQDREEEAAAAPAADQQRAQDREEEAAAAP PTSSGHRTEKRK Q QC+PAGGTGQ
Sbjct: 61 QQGAQDREEEAAAAPAADQQRAQDREEEAAAAPVPTSSGHRTEKRKRLQLQCQPAGGTGQ 120
Query: 121 RRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSS 180
RRGS SSPSADQQ AQDREEEAAAAP PTSRGHRTEKRK QQPQRRPA GTGQRRGS SS
Sbjct: 121 RRGSRSSPSADQQRAQDREEEAAAAPVPTSRGHRTEKRKRQQPQRRPAGGTGQRRGSGSS 180
Query: 181 PSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQR 240
PSADQQGAQDREEEAAAAP PTSRGHRTEKRK QQPQCRPA GTGQRRGSRSSPSADQQR
Sbjct: 181 PSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQCRPAGGTGQRRGSRSSPSADQQR 240
Query: 241 AQDREEEAAAAPAPTSSGHRTEKRK 265
AQDREEEAAAAPAPTS GHRTEKRK
Sbjct: 241 AQDREEEAAAAPAPTSRGHRTEKRK 265
Score = 386 bits (992), Expect = e-108
Identities = 206/267 (77%), Positives = 210/267 (78%), Gaps = 35/267 (13%)
Query: 34 RPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAP------------------ 75
R + Q QCQPAGGTGQRRGS SSPSADQQ AQDREEEAAAAP
Sbjct: 105 RKRLQLQCQPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPVPTSRGHRTEKRKRQQPQ 164
Query: 76 -----------------AADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGT 118
+ADQQ AQDREEEAAAAPAPTS GHRTEKRKPQQPQCRPAGGT
Sbjct: 165 RRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQCRPAGGT 224
Query: 119 GQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSR 178
GQRRGS SSPSADQQ AQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPA GTGQRRGS
Sbjct: 225 GQRRGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSG 284
Query: 179 SSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQ 238
SPSADQQGAQDREEEAAAAP PTS GHRTEKRKR Q QC+PA GTGQRRGS S SA+Q
Sbjct: 285 YSPSADQQGAQDREEEAAAAPAPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSGCSSSANQ 344
Query: 239 QRAQDREEEAAAAPAPTSSGHRTEKRK 265
Q AQDREEEAAAAP PTSSGHRTEKRK
Sbjct: 345 QGAQDREEEAAAAPVPTSSGHRTEKRK 371
Score = 354 bits (909), Expect = 4e-98
Identities = 192/249 (77%), Positives = 196/249 (78%), Gaps = 35/249 (14%)
Query: 34 RPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPA----------------- 76
R +QQPQ +PAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPA
Sbjct: 158 RKRQQPQRRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQ 217
Query: 77 ------------------ADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGT 118
ADQQRAQDREEEAAAAPAPTS GHRTEKRKPQQPQ RPAGGT
Sbjct: 218 CRPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGT 277
Query: 119 GQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSR 178
GQRRGSG SPSADQQGAQDREEEAAAAPAPTS GHRTEKRK Q Q +PA GTGQRRGS
Sbjct: 278 GQRRGSGYSPSADQQGAQDREEEAAAAPAPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSG 337
Query: 179 SSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQ 238
S SA+QQGAQDREEEAAAAPVPTS GHRTEKRK QQPQ RPAAGTGQRRGS SSPSADQ
Sbjct: 338 CSSSANQQGAQDREEEAAAAPVPTSSGHRTEKRKPQQPQRRPAAGTGQRRGSGSSPSADQ 397
Query: 239 QRAQDREEE 247
QRAQDREEE
Sbjct: 398 QRAQDREEE 406
Score = 173 bits (439), Expect = 1e-43
Identities = 101/173 (58%), Positives = 109/173 (63%), Gaps = 39/173 (22%)
Query: 4 RQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQG 63
+Q+ QD + + EK KP +PQ+ +PAGGTGQRRGSG SPSADQQG
Sbjct: 238 QQRAQDREEEAAAAPAPTSRGHRTEKRKPQQPQR----RPAGGTGQRRGSGYSPSADQQG 293
Query: 64 AQDREEEAAAAPA-----------------------------------ADQQRAQDREEE 88
AQDREEEAAAAPA A+QQ AQDREEE
Sbjct: 294 AQDREEEAAAAPAPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSGCSSSANQQGAQDREEE 353
Query: 89 AAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEE 141
AAAAP PTSSGHRTEKRKPQQPQ RPA GTGQRRGSGSSPSADQQ AQDREEE
Sbjct: 354 AAAAPVPTSSGHRTEKRKPQQPQRRPAAGTGQRRGSGSSPSADQQRAQDREEE 406
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 409 bits (1051), Expect = e-114
Identities = 222/293 (75%), Positives = 224/293 (76%), Gaps = 53/293 (18%)
Query: 1 MKPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSAD 60
MKPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSAD
Sbjct: 1 MKPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSAD 60
Query: 61 QQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQ 120
QQGA QDREEEAAAAPAPTS GHRTEKRKPQQPQ RPAGGTGQ
Sbjct: 61 QQGA------------------QDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQ 102
Query: 121 RRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSS 180
RRGS SS SADQQGAQDREEEAAAAPAPTS GHRTEKRKPQQPQ RPAAGTGQRRGS S
Sbjct: 103 RRGSRSSSSADQQGAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAAGTGQRRGSGCS 162
Query: 181 PSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQC------------------RPAA 222
PSADQQ AQDREEEA AAPVPTS GHRTEKRKR Q QC +PA
Sbjct: 163 PSADQQRAQDREEEATAAPVPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSRSSPSRQPAG 222
Query: 223 GTGQRRGSRSSPSADQQRAQDREEEA-----------------AAAPAPTSSG 258
GTGQRRGSRSSPSADQQRAQDREEEA AAAP PT+ G
Sbjct: 223 GTGQRRGSRSSPSADQQRAQDREEEAAQPQRRPAGGTGQRRGTAAAPVPTTGG 275
Score = 302 bits (774), Expect = 2e-82
Identities = 155/191 (81%), Positives = 159/191 (83%), Gaps = 4/191 (2%)
Query: 79 QQRAQDREEEAAAAPAPTSSGHRTEKRKP----QQPQCRPAGGTGQRRGSGSSPSADQQG 134
+Q+ QD + EK KP QQPQC+PAGGTGQRRGSGSSPSADQQG
Sbjct: 4 RQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQG 63
Query: 135 AQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEE 194
AQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPA GTGQRRGSRSS SADQQGAQDREEE
Sbjct: 64 AQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSRSSSSADQQGAQDREEE 123
Query: 195 AAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAP 254
AAAAP PTS GHRTEKRK QQPQCRPAAGTGQRRGS SPSADQQRAQDREEEA AAP P
Sbjct: 124 AAAAPAPTSSGHRTEKRKPQQPQCRPAAGTGQRRGSGCSPSADQQRAQDREEEATAAPVP 183
Query: 255 TSSGHRTEKRK 265
TSSGHRTEKRK
Sbjct: 184 TSSGHRTEKRK 194
Score = 188 bits (477), Expect = 5e-48
Identities = 100/139 (71%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
Query: 128 PSADQQGAQDREEEAAAAPAPTSRGHRTEKRKP-QQPQRRPAAGTGQRRGSRSSPSADQQ 186
P +Q + R+ ++ +T+ +P QQPQ +PA GTGQRRGS SSPSADQQ
Sbjct: 3 PRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQ 62
Query: 187 GAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREE 246
GAQDREEEAAAAP PTSRGHRTEKRK QQPQ RPA GTGQRRGSRSS SADQQ AQDREE
Sbjct: 63 GAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSRSSSSADQQGAQDREE 122
Query: 247 EAAAAPAPTSSGHRTEKRK 265
EAAAAPAPTSSGHRTEKRK
Sbjct: 123 EAAAAPAPTSSGHRTEKRK 141
Score = 45.1 bits (105), Expect = 7e-05
Identities = 37/112 (33%), Positives = 45/112 (40%), Gaps = 40/112 (35%)
Query: 13 RKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAA 72
R R S DQ ++ + QPQ +PAGGTGQRRG+ ++P G R
Sbjct: 228 RGSRSSPSADQQRAQDREEEAA---QPQRRPAGGTGQRRGTAAAPVPTTGGTGQR----- 279
Query: 73 AAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGS 124
AAAPAPTS+ GTGQRRGS
Sbjct: 280 --------------RGTAAAPAPTST------------------GTGQRRGS 299
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 67.0 bits (162), Expect = 2e-11
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 24/265 (9%)
Query: 13 RKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDRE--EE 70
+KLR + ++ ++P + GG G + G +P + G + R ++
Sbjct: 272 KKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQK 331
Query: 71 AAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPS- 129
A A AA +R +++AA + R +KP++ + AG + RG G
Sbjct: 332 ATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGA--KSRGGGDKKGL 389
Query: 130 --ADQQGA-------QDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSS 180
A ++G Q+ A APA RG ++K + + P+ + G R G
Sbjct: 390 REAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKK 449
Query: 181 PSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQR 240
P Q A+ + EA A SRG + + R++ AAGT R G S S
Sbjct: 450 PRRRGQKARQKAAEAGAE----SRGDKKQGRQKAS-----AAGTKSRGGGLKSHSGKNLW 500
Query: 241 AQDREEEAAAAPAPTSSGHRTEKRK 265
+ ++ EAA A T++G ++ RK
Sbjct: 501 RRGQKAEAAGEKA-TAAGAKSRGRK 524
Score = 61.2 bits (147), Expect = 9e-10
Identities = 60/216 (27%), Positives = 87/216 (40%), Gaps = 23/216 (10%)
Query: 46 GTGQRRGSGSSPSADQQGAQDREEEAAAAPAAD---QQRAQDREEEAAAAPAPTSSGHRT 102
G RR S+ A +G D++ A D + R Q+ A APA G +
Sbjct: 365 GKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGS 424
Query: 103 EKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQ 162
+K + + P+ + G R G G P Q A+ + EA A SRG + + R
Sbjct: 425 KKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGA----ESRGDKKQGR---- 476
Query: 163 PQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAA 222
Q+ AAGT R G S S + ++ EAA T+ G ++ RK+ + Q A
Sbjct: 477 -QKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKA-TAAGAKSRGRKQPRRQKPAVA 534
Query: 223 GTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSG 258
G R G S R+ + A A TS G
Sbjct: 535 GAKSRVGGSKS----------RQRQKAVAAGATSHG 560
Score = 54.3 bits (129), Expect = 1e-07
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 28/190 (14%)
Query: 63 GAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRR 122
G + R+ AA A + E++AAAA + G + R+ Q A TG ++
Sbjct: 82 GKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQK----AAATGSKK 137
Query: 123 GSGSSPSADQQGAQDR---EEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTG------- 172
+ + G+++R ++AAAA S+G ++PQ+ AAG
Sbjct: 138 PRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGG-------EKPQKAAAAGAKSRSGKKP 190
Query: 173 QRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRS 232
+RRG++S D++G Q A + +RG R +K +R +P A G RRG
Sbjct: 191 RRRGAKSRGDEDKKGRQ----REAKSRFGKTRGGRRKKHRRPKP---AAGGAKSRRGGGK 243
Query: 233 SPSADQQRAQ 242
P ++R Q
Sbjct: 244 KPQKQRRRGQ 253
Score = 52.0 bits (123), Expect = 5e-07
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 16 RESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEA--AA 73
+ ++ G + L KP R Q+ A TG ++ + + G+++R A AA
Sbjct: 107 KAAAAGTKSLGGRGRKPRRRGQK-----AAATGSKKPRWRAQKSAAAGSKNRGAGAQKAA 161
Query: 74 APAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQ 133
A A + + ++ ++AAAA A + SG +KP +RRG+ S D++
Sbjct: 162 AAAGVKSQGGEKPQKAAAAGAKSRSG-----KKP------------RRRGAKSRGDEDKK 204
Query: 134 GAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQ-RRGSRSSPSADQQGAQDRE 192
G R+ EA + T G R + R+P +PAAG + RRG P ++ Q +
Sbjct: 205 G---RQREAKSRFGKTRGGRRKKHRRP-----KPAAGGAKSRRGGGKKPQKQRRRGQ-KA 255
Query: 193 EEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSS 233
+ V SRG +K+ R+Q Q AG +RRG+ ++
Sbjct: 256 ATGGKSRVGKSRG-GGDKKLRRQGQNAALAG-AKRRGAATA 294
Score = 47.4 bits (111), Expect = 1e-05
Identities = 73/308 (23%), Positives = 114/308 (37%), Gaps = 58/308 (18%)
Query: 2 KPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTG-------QRRGSG 54
KPR + Q + + G Q + ++PQ A G +RRG+
Sbjct: 137 KPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAK 196
Query: 55 SSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEK---RKPQQPQ 111
S D++G Q RE ++ +R + R P P + G ++ + +KPQ+ +
Sbjct: 197 SRGDEDKKGRQ-REAKSRFGKTRGGRRKKHRR------PKPAAGGAKSRRGGGKKPQKQR 249
Query: 112 CR----PAGG---TGQRRGSG------SSPSADQQGAQDR-EEEAAAAPAPTSRGHRTEK 157
R GG G+ RG G +A GA+ R A PA RG R K
Sbjct: 250 RRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPK 309
Query: 158 ----------RKPQQPQRR-----PAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPT 202
R ++P+RR AA G +RG A G + R+++
Sbjct: 310 SLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQ-------R 362
Query: 203 SRGHRTEKRKRQQPQCRPAAG---TGQRRGSRSSPSADQQRAQDREEEAAAAPA--PTSS 257
RG + ++K + G G R R + R Q+ A APA P
Sbjct: 363 RRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGG 422
Query: 258 GHRTEKRK 265
G + +R+
Sbjct: 423 GSKKPRRR 430
Score = 45.4 bits (106), Expect = 5e-05
Identities = 72/329 (21%), Positives = 122/329 (37%), Gaps = 75/329 (22%)
Query: 2 KPRQKEQDTRLRKLRESSE--GDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSA 59
KPR++ Q R + +E GD+ +K + + G G + SG +
Sbjct: 449 KPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSR-------GGGLKSHSGKNLWR 501
Query: 60 DQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQ----------- 108
Q A+ E+A AA A + R Q R ++ A A A + G +++ +
Sbjct: 502 RGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGG 561
Query: 109 --QPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRR 166
Q R GG R+ ++ +A +G D++ A A ++ + K + R+
Sbjct: 562 GGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGK--KAWRQ 619
Query: 167 PAAGTGQ-------RRGSRSSPSADQQ-----------GAQDR---------EEEAAAAP 199
AAGTG RRG + + +A++ G Q R E AAAA
Sbjct: 620 KAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAV 679
Query: 200 VPTSRGHRTEKRKR----------------------QQPQCRPAAGTG--QRRGSRSSPS 235
+ + +R+R ++P+ + G G + RGS + S
Sbjct: 680 GQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKS 739
Query: 236 ADQQRAQDREEEAAAAPAPTSSGHRTEKR 264
A+ R + AAA G +R
Sbjct: 740 RGSGGAKSRSGKKAAASKSHGGGGAKRRR 768
Score = 44.3 bits (103), Expect = 1e-04
Identities = 65/268 (24%), Positives = 102/268 (38%), Gaps = 46/268 (17%)
Query: 37 QQPQCQPAGGTGQRRGSGSSPSADQQGAQDRE--EEAAAAPAADQQRAQDREEEAAAAPA 94
+Q Q A G G G+ S G + R+ + AAAA Q ++AAA
Sbjct: 546 RQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVT 605
Query: 95 PTSSGHRTEKRKPQQPQCRPAGGTGQ-------RRGSGSSPSADQQ-----------GAQ 136
+ SG +K Q+ A GTG RRG + +A++ G Q
Sbjct: 606 KSRSGDGGKKAWRQK-----AAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQ 660
Query: 137 DREEEAAAAPAPTSR----GHRTEKRKPQQPQRRPAAGTG-----------QRRGSRSSP 181
R ++ AAA + +S G E RK + +R + G G QRRG +
Sbjct: 661 PRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRL 720
Query: 182 SADQQGAQDREEEAAAAPVPTSRGHRTEK-RKRQQPQCRPAAGTGQRRGSRSSPSADQQR 240
+ G + + A S G ++ +K + G +RRG + + ++
Sbjct: 721 GKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSRSGEKA 780
Query: 241 AQDREEEAAAA-----PAPTSSGHRTEK 263
++AAAA P S G R +K
Sbjct: 781 VTAGGQKAAAAGGKKPPRVKSRGGRGQK 808
Score = 37.4 bits (85), Expect = 0.014
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 111 QCRPAGGTGQRRGSGSSPSAD--QQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPA 168
QC A G R G G+ A + + E AA A + + G + ++ +R+ A
Sbjct: 8 QCNQAAG---RAGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKA 64
Query: 169 AGTGQR---RGSRSS-----------PSADQQGAQDR---EEEAAAAPVPTSRGHRTEKR 211
A G++ RG + + +A GA++R E++AAAA + G + R
Sbjct: 65 AAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPR 124
Query: 212 KRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTEK 263
+R Q + + R +S+ + + R ++ AAAA + G + +K
Sbjct: 125 RRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQK 176
Score = 31.6 bits (70), Expect = 0.75
Identities = 43/176 (24%), Positives = 64/176 (36%), Gaps = 50/176 (28%)
Query: 4 RQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQP------AGGTGQRRGSGSSP 57
++ E + R+ R S GD + P Q+ +P GG + RGSG +
Sbjct: 681 QEAEARKKPRRRRAKSRGDGG--QNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAK 738
Query: 58 SADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGG 117
S GA+ R + AAA S H GG
Sbjct: 739 SRGSGGAKSRSGKKAAA----------------------SKSHG-------------GGG 763
Query: 118 TGQRRGSGSSPSADQQGAQDREEEAAAA-----PAPTSRGHRTEKRKP--QQPQRR 166
+RRG G+ + ++ ++AAAA P SRG R +K ++P RR
Sbjct: 764 AKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRGQKAAAGGKKPLRR 819
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 59.3 bits (142), Expect = 3e-09
Identities = 70/286 (24%), Positives = 108/286 (37%), Gaps = 45/286 (15%)
Query: 4 RQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSS--PSADQ 61
R + RK R S + EK K +++P + G R SGSS PS
Sbjct: 211 RDRSDSGSRRKRRHRSRSSKCKRKEKNKE---KKRPHTESPGRRSHRHSSGSSHSPSLSS 267
Query: 62 QGAQDREEEAAAAPAADQQRAQDREEEAAA-APAPTS-SGHRTEKRKPQQPQCRPAGGTG 119
+ R + D+ R + + + +P+P+ SG + +R Q +G G
Sbjct: 268 HYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQ--RSGAHG 325
Query: 120 QRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRS 179
R GS SP R + AAA APT E P+ +A + Q RG R+
Sbjct: 326 GRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPR------SAPSSQGRGGRA 379
Query: 180 SPSADQQGAQDREEEAA--AAPVPTSRGHRTEKRKRQQP--------------------Q 217
+ A ++ + R + +A P RG R+R +P
Sbjct: 380 AGGAGRRRRRRRRRRRSRSSASAPRRRG-----RRRPRPAPPRGSSRSLSRARSSSDSGS 434
Query: 218 CRPAAGTGQRRGSRSSPSADQQRAQD---REEEAAAAPAPTSSGHR 260
R A G G GS +RA++ R A+ +P+P + G R
Sbjct: 435 GRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRR 480
Score = 59.3 bits (142), Expect = 3e-09
Identities = 61/238 (25%), Positives = 89/238 (37%), Gaps = 37/238 (15%)
Query: 26 ENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDR 85
E KT R P+GG+G + S + GA +A +P R
Sbjct: 285 EGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPR 344
Query: 86 EEEAAAAPAPTSSGHRTEKRKPQQPQC------RPAGGTGQRRGSGSSPSADQQGAQDRE 139
+ AAA APT E P+ R AGG G+RR + + R
Sbjct: 345 VRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRR----------RRRRRRR 394
Query: 140 EEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAP 199
++A AP RG R + P + R + R SS S +GA P
Sbjct: 395 RSRSSASAPRRRGRRRPRPAPPRGSSRSLS-----RARSSSDSGSGRGA------PGPGP 443
Query: 200 VPTS-RGH--RTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAP 254
P S RGH ++ K + P+ RPA+ + SP A +R + ++ +P P
Sbjct: 444 EPGSERGHGGHGKRAKERPPRARPAS-------TSPSPGAHGRRGGPEGKSSSRSPGP 494
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 56.6 bits (135), Expect = 2e-08
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 34/209 (16%)
Query: 58 SADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGG 117
+ + + A++++++A A ++ ++ E +AAA PA G K KP Q
Sbjct: 13 NVNDEKAKEKDKKAEGAATEEEGTPKESEPQAAAEPAEAKEG----KEKPDQ-------- 60
Query: 118 TGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGS 177
G ++ A +EE A P T + P+ P++ AA
Sbjct: 61 --DAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAEPPKAPEQEQAA-------- 110
Query: 178 RSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCR----PAAGTGQRRGSRSS 233
P G + EAAAAP ++ E+ +++ + + PAA Q S +
Sbjct: 111 ---PGPAAGGEAPKAAEAAAAPAESAAPAAGEEPSKEEGEPKKTEAPAAPAAQETKSDGA 167
Query: 234 PSAD-----QQRAQDREEEAAAAPAPTSS 257
P++D + A +E AA AP+S+
Sbjct: 168 PASDSKPGSSEAAPSSKETPAATEAPSST 196
Score = 47.0 bits (110), Expect = 2e-05
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 29/197 (14%)
Query: 17 ESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQG-AQDREEEAAAAP 75
++ E D+ E T+ ++ + Q A + + P D +G A+++E E AA
Sbjct: 18 KAKEKDKKAEGAATEEEGTPKESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAA 77
Query: 76 AADQQRAQDREEEAAAAPAPTSSGHRTEK----RKPQQPQCRPAGGTGQRRGSGSSPSAD 131
A +EEA A + G K + P+Q Q P G G +P A
Sbjct: 78 A---------KEEAPKAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAAG-----GEAPKAA 123
Query: 132 QQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSAD-----QQ 186
+ A E A AA S+ E+ +P++ + PAA Q S +P++D +
Sbjct: 124 EAAAAPAESAAPAAGEEPSK----EEGEPKKTE-APAAPAAQETKSDGAPASDSKPGSSE 178
Query: 187 GAQDREEEAAAAPVPTS 203
A +E AA P+S
Sbjct: 179 AAPSSKETPAATEAPSS 195
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 56.2 bits (134), Expect = 3e-08
Identities = 61/250 (24%), Positives = 90/250 (36%), Gaps = 32/250 (12%)
Query: 36 QQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAP 95
Q P+ QP G G++R +G P++ +Q R + A +A+Q R + P
Sbjct: 1412 QGPPRDQPGGPAGRQRPTGR-PTSARQAMGHRHKAGGAGRSAEQSRGAGKNRAGLELPL- 1469
Query: 96 TSSGHRTEKRKPQQPQCRPAGGTGQRRGSG-------SSPSADQ----QGAQDREEEAAA 144
R P P + G+ RG G ++P+ + G EE AA
Sbjct: 1470 --------GRPPSAPADKDGSKPGRTRGDGALQSLCLTTPTEEAVYCFYGNDSDEEPPAA 1521
Query: 145 APAPTSRGHRTEKR--KPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPT 202
AP PT R R ++PQ R A + + P A Q + +E + +
Sbjct: 1522 APTPTHRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSLIADETPPCYSLSS 1581
Query: 203 SRGHRTEKRKRQQPQCRPAA---------GTGQRRGSRSSPSADQQRAQDREEEAAAAPA 253
S +E + P P G G R S SP A ++ Q A
Sbjct: 1582 SASSLSEPEPSEPPAVHPRGREPAVTKDPGPGGGRDSSPSPRAAEELLQRCISSALPRRR 1641
Query: 254 PTSSGHRTEK 263
P SG R K
Sbjct: 1642 PPVSGLRRRK 1651
Score = 45.4 bits (106), Expect = 5e-05
Identities = 64/281 (22%), Positives = 101/281 (35%), Gaps = 62/281 (22%)
Query: 44 AGGTG------QRRGSGSSPSADQ-QGAQDREEE------AAAAPAADQQRAQDREEEAA 90
AGG G +RR G +P+ + +GA D+E E AA PA ++ A
Sbjct: 1308 AGGAGLHFAGHRRREEGPAPTGSRPRGAADQELELLRECLGAAVPARLRKVASALVPGRR 1367
Query: 91 AAPAP----------------------------TSSGHRTEKRKPQQPQCRPAGGTGQRR 122
A P P +S+ +++ P+ +P G G++R
Sbjct: 1368 ALPVPVYMLVPAPAPAQEDDSCTDSAEGTPVNFSSAASLSDETLQGPPRDQPGGPAGRQR 1427
Query: 123 GSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSR---- 178
+G SA Q + A A SRG + + P RP + + GS+
Sbjct: 1428 PTGRPTSARQAMGHRHKAGGAGRSAEQSRGAGKNRAGLELPLGRPPSAPADKDGSKPGRT 1487
Query: 179 -----------SSPSADQ----QGAQDREEEAAAAPVPTSRGHRTEKR--KRQQPQCRPA 221
++P+ + G EE AAAP PT R R R++PQ R
Sbjct: 1488 RGDGALQSLCLTTPTEEAVYCFYGNDSDEEPPAAAPTPTHRRTSAIPRAFTRERPQGRKE 1547
Query: 222 AGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTE 262
A + + P A Q + +E +S+ +E
Sbjct: 1548 APAPSKAAPAAPPPARTQPSLIADETPPCYSLSSSASSLSE 1588
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 55.5 bits (132), Expect = 5e-08
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 33/251 (13%)
Query: 24 WLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPA----ADQ 79
WL++ K P+++ Q A G ++ + S+D + + + EEE PA
Sbjct: 57 WLKSAKV----PERKLQ---ANGPVAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPA 109
Query: 80 QRAQDREEEAAAAPAPTSSGHRT--------EKRKPQQ----PQCRPAGGTGQRRGSGSS 127
+R +AAA + +SS + +K++P Q PQ + A ++ S S
Sbjct: 110 KRVGLPPGKAAAKASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDS 169
Query: 128 PSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRR-PAAGTGQRRGSRSSPSADQQ 186
D + + E P T + + + P +P R P G+ S SS S+
Sbjct: 170 ---DSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSS 226
Query: 187 GAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREE 246
EE+AAA P +T +K+ + A T R S SS + +++++
Sbjct: 227 SDDSEEEKAAATP------KKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKK 280
Query: 247 EAAAAPAPTSS 257
P P SS
Sbjct: 281 PMKNKPGPYSS 291
Score = 51.6 bits (122), Expect = 7e-07
Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 29/259 (11%)
Query: 6 KEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQ--PAGGTGQRRGSGSSPSADQQG 63
K T RK S + E E+ KP++ + P P ++ G+ P ++
Sbjct: 255 KAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPP--KKA 312
Query: 64 AQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRG 123
+ ++ ++ ++D+ + EE+ A S T K P ++
Sbjct: 313 VEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKA--TTKPPP-----------AKKAA 359
Query: 124 SGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKR--------KPQQPQRRPAAGTGQRR 175
SS S+D ++D +EA + PA T++ + KP ++P G +
Sbjct: 360 ESSSDSSDSDSSED--DEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLL 417
Query: 176 GSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPS 235
++ S+ ++ + EEE V T++ T K P A G R S S S
Sbjct: 418 TRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLP--AKQAPQGSRDSSSDSDS 475
Query: 236 ADQQRAQDREEEAAAAPAP 254
+ + +++ ++A P
Sbjct: 476 SSSEEEEEKTSKSAVKKKP 494
Score = 44.7 bits (104), Expect = 9e-05
Identities = 55/262 (20%), Positives = 93/262 (35%), Gaps = 56/262 (21%)
Query: 17 ESSEGDQ-------WLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREE 69
+SSE D+ +N KP + P +PA Q G G + + EE
Sbjct: 369 DSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEE 428
Query: 70 EAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPS 129
E++++ EEE T+ T K P + G+ SS
Sbjct: 429 ESSSS-----------EEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRD-----SSSD 472
Query: 130 ADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQ------PQRRPAAGTGQRRGSRSSPSA 183
+D +++ EE+ + + K+KPQ+ P + +A G+ S SS S
Sbjct: 473 SDSSSSEEEEEKTSKSAV---------KKKPQKVAGGAAPSKPASAKKGKAESSNSSSSD 523
Query: 184 DQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQD 243
D ++ + + +P +PQ A GT + + +++
Sbjct: 524 DSSEEEEEKLKGKGSP---------------RPQAPKANGTSALTAQNGKAA---KNSEE 565
Query: 244 REEEAAAAPAPTSSGHRTEKRK 265
EEE A S +KRK
Sbjct: 566 EEEEKKKAAVVVSKSGSLKKRK 587
Score = 43.5 bits (101), Expect = 2e-04
Identities = 55/249 (22%), Positives = 90/249 (36%), Gaps = 41/249 (16%)
Query: 17 ESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPA 76
E S D E++K +P++ +PQ + A ++ S S D + + P
Sbjct: 130 EESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDS---------DSDSSSEDEPP 180
Query: 77 ADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQP-QCRPAGGTGQRRGSGSSPSADQQGA 135
+Q+ P T + + + P +P + P G+ S SS S+
Sbjct: 181 KNQK------------PKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSD 228
Query: 136 QDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEA 195
EE+AAA P T + + P + AA T R+ S S S+ EEE
Sbjct: 229 DSEEEKAAATPKKTVPKKQVVAKAPVK-----AATTPTRKSSSSEDSSSD------EEEE 277
Query: 196 AAAPVPTSRGHRTEKRKRQQPQCRPAAGT--------GQRRGSRSSPSADQQRAQDREEE 247
P+ G + P + + GT Q+ S S+D+ + EE+
Sbjct: 278 QKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEK 337
Query: 248 AAAAPAPTS 256
A S
Sbjct: 338 KPPTKAVVS 346
Score = 36.6 bits (83), Expect = 0.023
Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 26/176 (14%)
Query: 10 TRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGT---------GQRRGSGSSPSAD 60
TR S E E EKTK + +P+ G R S S S+
Sbjct: 418 TRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSS 477
Query: 61 QQGAQDREEEAA-----------AAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQ- 108
+ +++ ++A AAP+ + + E + ++ + SS EK K +
Sbjct: 478 SEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKG 537
Query: 109 --QPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQ 162
+PQ A GT + + +++ EEE A S+ +KRK +
Sbjct: 538 SPRPQAPKANGTSALTAQNGKAA---KNSEEEEEEKKKAAVVVSKSGSLKKRKQNE 590
Score = 32.0 bits (71), Expect = 0.57
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Query: 18 SSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAA 77
SS D E E+ + +PQ A GT + +A ++ E++ AA +
Sbjct: 520 SSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQ-NGKAAKNSEEEEEEKKKAAVVVS 578
Query: 78 DQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGS 124
+ R++ AA A T + +K K Q P P G++R S
Sbjct: 579 KSGSLKKRKQNEAAKEAETP---QAKKIKLQTPNTFPKRKKGEKRAS 622
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 55.1 bits (131), Expect = 6e-08
Identities = 70/287 (24%), Positives = 108/287 (37%), Gaps = 39/287 (13%)
Query: 16 RESSEGDQWLENE-KTK-PLRPQQQ----PQCQPAGGTGQRRG-SGSSPSAD-------- 60
+E SE D +++ KT+ PLR + + P+ RR SGSSP
Sbjct: 1554 QERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPR 1613
Query: 61 -QQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTG 119
Q G+ E A AP A +R++ P+P S TE P+ R A
Sbjct: 1614 AQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSS-TESSPEHPPKSRTARRGS 1672
Query: 120 Q--------------RRGSGSSPSADQQGAQDREEEAAAA-PAPTSRGHRTEKRKPQQPQ 164
+ RR S SSP ++ R +A++ P SR +R P
Sbjct: 1673 RSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSS 1732
Query: 165 RRPA--AGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAA 222
PA + + +RR S SSP + R + SR R+ + K + + R +
Sbjct: 1733 PEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRS-RSRREKTRTTRRRDRS 1791
Query: 223 GTGQRRGSRSSPSADQQRAQDREEEAAA----APAPTSSGHRTEKRK 265
G+ Q R S + R R + +PA S + +R+
Sbjct: 1792 GSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRR 1838
Score = 52.0 bits (123), Expect = 5e-07
Identities = 51/230 (22%), Positives = 93/230 (40%), Gaps = 27/230 (11%)
Query: 47 TGQRRG-SGSSPSADQQGAQDREEEAAAAPAAD-QQRAQDREEEAAAAPAPTSSGHRTEK 104
T QRR S SSP + R + ++P + + R R + ++P P K
Sbjct: 736 TSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCP--------K 787
Query: 105 RKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRK--PQQ 162
+K Q P R G+ Q + +P R ++++P P + ++
Sbjct: 788 QKSQTPPRRSRSGSSQPKAKSRTPP--------RRSRSSSSPPPKQKSKTPSRQSHSSSS 839
Query: 163 PQRRPAAGTGQRRGSRSSPSADQQGAQDREE---EAAAAPVPTSRGHRTEKRKRQQPQCR 219
P + +GT R+GS +SP A++Q + E++ P SR P
Sbjct: 840 PHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRV 899
Query: 220 PAAGTGQRRGSRSSPSADQQRA----QDREEEAAAAPAPTSSGHRTEKRK 265
++ ++ SRSS + +A + R +++P+P+ RT R+
Sbjct: 900 KSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRR 949
Score = 52.0 bits (123), Expect = 5e-07
Identities = 57/233 (24%), Positives = 88/233 (37%), Gaps = 21/233 (9%)
Query: 32 PLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAA 91
P P+ +C T QR SGS S DQ+ A P + R+ +E
Sbjct: 1500 PSSPELNNKCL----TPQRERSGSESSVDQK-------TVARTPLGQRSRSGSSQELDVK 1548
Query: 92 APAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQG-AQDREEEAAAAPAPTS 150
A S R+E + + QR SGSSP D + R + ++P
Sbjct: 1549 PSA--SPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKD 1606
Query: 151 R---GHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQ---DREEEAAAAPVPTSR 204
+ R + P+ + A R SRS S+ +G E++ P SR
Sbjct: 1607 KPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSR 1666
Query: 205 GHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSS 257
R R +P+ + + +RR SRSSP ++ R +A++ T S
Sbjct: 1667 TARRGSRSSPEPKTK-SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRS 1718
Score = 51.6 bits (122), Expect = 7e-07
Identities = 60/227 (26%), Positives = 90/227 (39%), Gaps = 29/227 (12%)
Query: 49 QRRGSGSSPSA-DQQGAQDREEEAAAAPAA-DQQRAQDR-EEEAAAAPAPTSSGH--RTE 103
+R SGSSP D G R + ++P D R R E ++P P + R
Sbjct: 1437 RRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPR 1496
Query: 104 KRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQP 163
R P P+ T QR SGS S DQ+ A T G R+ Q+
Sbjct: 1497 SRSPSSPELNNKCLTPQRERSGSESSVDQK-----------TVARTPLGQRSRSGSSQEL 1545
Query: 164 QRRPAAGTGQRRGSRSSP--SADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQ----QPQ 217
+P+A +R S SSP A + + + ++P S+ + +R R + +
Sbjct: 1546 DVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVK 1605
Query: 218 CRPAAGTGQRRGSRSS--PSADQQRAQDREEEAAAA-----PAPTSS 257
+P A + GS SS P A RA R + ++ P+P S
Sbjct: 1606 DKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGS 1652
Score = 49.7 bits (117), Expect = 3e-06
Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 21/240 (8%)
Query: 31 KPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAA 90
+P + ++ + + S SS S+ G+ + E ++ P + +
Sbjct: 2525 QPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALK-----RV 2579
Query: 91 AAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTS 150
+P P E R P+ P +RR S SS S+ + ++++ + +S
Sbjct: 2580 PSPTPAPKEAVREGRPPE-----PTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2634
Query: 151 RGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRT-- 208
+ PA Q +SP G +R + P+ + R R+
Sbjct: 2635 SSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPG--ERRSRSPRKPIDSLRDSRSLS 2692
Query: 209 -----EKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTEK 263
+R QP R + RGSR D + + +P P HR+ +
Sbjct: 2693 YSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMR--HRSSR 2750
Score = 46.6 bits (109), Expect = 2e-05
Identities = 36/185 (19%), Positives = 77/185 (41%), Gaps = 14/185 (7%)
Query: 85 REEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDRE----- 139
+EE PA T + E + + + R A G GSS ++ + ++
Sbjct: 108 KEETPGQRPAVTETHQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAPEP 167
Query: 140 -------EEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDRE 192
E++++ +PT + + +K+K + RR + + +R +SS + + +
Sbjct: 168 PKPYSLVRESSSSRSPTPK--QKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESK 225
Query: 193 EEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAP 252
+ +P P S+ +K++++ PA + + S S+ SA +AAA
Sbjct: 226 KRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAK 285
Query: 253 APTSS 257
T++
Sbjct: 286 THTTA 290
Score = 46.6 bits (109), Expect = 2e-05
Identities = 53/227 (23%), Positives = 88/227 (38%), Gaps = 23/227 (10%)
Query: 55 SSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRP 114
SSP D+ +D++E++A P+ +R+ PAPT PQ P
Sbjct: 332 SSPYEDKD--KDKKEKSATRPSPSPERSST----GPEPPAPTPLLAERHGGSPQPLATTP 385
Query: 115 AGGTGQRRGSGSSPSADQQGAQDRE--------EEAAAAPAPTSRGHRTEKRKPQQPQRR 166
S +SP+ D+ + E E + +P PT + R P+ P+
Sbjct: 386 LSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPT-KVSRHASSSPESPKPA 444
Query: 167 PAAGTGQRRGSRSSPSADQQGAQDREEEAAAAP---VPTSRGHRTEKRKRQQPQCRPAAG 223
PA G+ + S + G R++ + P + SR T KR R + + G
Sbjct: 445 PAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRG 504
Query: 224 -----TGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTEKRK 265
+ Q R SRS+ + R+ R + + P S R +R+
Sbjct: 505 HSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRR 551
Score = 45.8 bits (107), Expect = 4e-05
Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 30/247 (12%)
Query: 26 ENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDR 85
E + L ++ + + A G GSS D Q R A PA + +
Sbjct: 120 ETHQLAELNEKKNERLRAAFGISDSYVDGSS--FDPQ----RRAREAKQPAPEPPKPYSL 173
Query: 86 EEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAA 145
E++++ +PT + +K+K + + + +R+ S S ++ + E +
Sbjct: 174 VRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKS----SKKKKHRSESESKKRKH 229
Query: 146 PAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQD----REEEAAAAPVP 201
+PT + R K K ++ R RR RS+ SAD + D R AAA
Sbjct: 230 RSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRST-SADSASSSDTSRSRSRSAAAKTHT 288
Query: 202 TSRGHRT------EKRKRQQPQCRPAAGTGQRRGS-------RSSPSADQQRAQDREEEA 248
T+ R+ + + P P + QR S SSP D+ + D++E++
Sbjct: 289 TALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDK--DKKEKS 346
Query: 249 AAAPAPT 255
A P+P+
Sbjct: 347 ATRPSPS 353
Score = 43.9 bits (102), Expect = 1e-04
Identities = 48/230 (20%), Positives = 81/230 (35%), Gaps = 13/230 (5%)
Query: 49 QRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQ 108
QRRG SP + + +A + R+ R + R R
Sbjct: 529 QRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRT 588
Query: 109 QPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPA 168
+ R T RR S S A + ++ R + + R+ R P + R
Sbjct: 589 PARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSR 648
Query: 169 AGTGQRRGSRSSPSADQQG-----AQDREEEAAAAPVPTSRGH---RTEKRKRQQPQC-- 218
+ T RRG S + ++G R + + P RG RT +R R + +
Sbjct: 649 SRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLV 708
Query: 219 ---RPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTEKRK 265
R + T QRRG S S + +++ + + + +P R R+
Sbjct: 709 RRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRR 758
Score = 42.7 bits (99), Expect = 3e-04
Identities = 51/268 (19%), Positives = 91/268 (33%), Gaps = 25/268 (9%)
Query: 10 TRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREE 69
T R+ R S + P R + + + G + R S + + R
Sbjct: 577 TPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSR 636
Query: 70 EAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPS 129
+ A + + R++ + + R+ R P + R T RR G S S
Sbjct: 637 SRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARR--GRSRS 694
Query: 130 ADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRG-SRSSPSADQQGA 188
+ + R SR + R +R+ + T QRR S SSP +
Sbjct: 695 RTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRI 754
Query: 189 QDREEEAAAAPVPTSRGHRT-----------EKRKRQQPQCRPAAGTGQ----------- 226
R + ++P ++ + K+K Q P R +G+ Q
Sbjct: 755 SSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRR 814
Query: 227 RRGSRSSPSADQQRAQDREEEAAAAPAP 254
R S S P + + R+ ++++P P
Sbjct: 815 SRSSSSPPPKQKSKTPSRQSHSSSSPHP 842
Score = 41.6 bits (96), Expect = 7e-04
Identities = 63/285 (22%), Positives = 104/285 (36%), Gaps = 44/285 (15%)
Query: 1 MKPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQ---------QQPQC-QPAGGTGQR 50
+ P + TR R +S E + ++ P PQ P+ +PA G
Sbjct: 391 VNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSH 450
Query: 51 RGSGSSPSADQQ--GAQDREEEAAAAPAADQQRAQD---REEEAAAAPAPTSSGH----- 100
R SSP++ + G R++ + P+ R++ + + + PT GH
Sbjct: 451 REISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRS 510
Query: 101 --------------------RTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREE 140
R R PQ+P + T QRRG S + ++
Sbjct: 511 PQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNT-QRRGRSRSARRGRSHSRSPAT 569
Query: 141 EAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPV 200
+ +R R+ R P +RR + T RR SRS A + ++ R +
Sbjct: 570 RGRSRSRTPARRGRSRSRTP--ARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRT 627
Query: 201 PTSRGHRTEKRKRQQPQCRPAAGTGQRRG-SRSSPSADQQRAQDR 244
+ R+ R + R + T RRG SRS A + R++ R
Sbjct: 628 RSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSR 672
Score = 38.5 bits (88), Expect = 0.006
Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 13/175 (7%)
Query: 63 GAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRR 122
GAQ AA PA +++ + ++++ + +SS + + G+
Sbjct: 2514 GAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSS-----------SSGSSSSD 2562
Query: 123 GSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPS 182
GSS + A R AP R R + P + +RR ++ + S SS S
Sbjct: 2563 SEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSS 2622
Query: 183 ADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQC--RPAAGTGQRRGSRSSPS 235
+ + ++++ +S + + PQ +PA+ G R S S
Sbjct: 2623 SSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRS 2677
Score = 37.0 bits (84), Expect = 0.018
Identities = 50/241 (20%), Positives = 90/241 (37%), Gaps = 23/241 (9%)
Query: 2 KPRQKEQDTRLRKLRESSEGDQWLENEKTKPL-RPQQQPQCQPAGGTGQRRGSGSSPSAD 60
+ R + TR R + + +T P+ R + + + P T +R S +SP
Sbjct: 1934 RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPI--TRRRSRSRTSPVTR 1991
Query: 61 QQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQ 120
++ R + + R + + P + R+ R P P+
Sbjct: 1992 RRS---RSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPR--------- 2039
Query: 121 RRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSS 180
+R SP A ++ ++ R T+RG R+ R P +RR A+G+ R ++
Sbjct: 2040 KRSRSRSPLAIRRRSRSRTPR-------TARGKRSLTRSPPAIRRRSASGSSSDRSRSAT 2092
Query: 181 PSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQR 240
P A + + R A S R +CR + G + GS +P + Q+
Sbjct: 2093 PPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCR-SPGMLEPLGSSRTPMSVLQQ 2151
Query: 241 A 241
A
Sbjct: 2152 A 2152
Score = 33.5 bits (75), Expect = 0.20
Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 40/249 (16%)
Query: 2 KPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQ 61
+ R + TR R +S + +T P+ ++ P T +RR +P +
Sbjct: 1899 RSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTP---TTRRRSRSRTPPVTR 1955
Query: 62 QGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQR 121
+ ++ R P ++R++ R + + + T +R + R + T +R
Sbjct: 1956 RRSRSR------TPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRS----RSRTSPVTRRR 2005
Query: 122 RGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRS-S 180
S +SP ++ + + P + R+ R P P++R SRS S
Sbjct: 2006 SRSRTSPVTRRR---------SRSRTPPAIRRRSRSRTPLLPRKR----------SRSRS 2046
Query: 181 PSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQR 240
P A ++ ++ R T+RG R+ R + R A+G+ R ++P A +
Sbjct: 2047 PLAIRRRSRSRTPR-------TARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNH 2099
Query: 241 AQDREEEAA 249
+ R A
Sbjct: 2100 SGSRTPPVA 2108
Score = 32.0 bits (71), Expect = 0.57
Identities = 34/190 (17%), Positives = 66/190 (34%), Gaps = 20/190 (10%)
Query: 2 KPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQ 61
+P+ K + R SS + ++ P + GT R+GS +SP A++
Sbjct: 803 QPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANE 862
Query: 62 QGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRK------PQQPQCRPA 115
Q + + + +++ + + +P T R+ QP+ +
Sbjct: 863 QSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAI 922
Query: 116 GGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSR--------------GHRTEKRKPQ 161
QR SGSS + + + + +P S K KP+
Sbjct: 923 ISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPE 982
Query: 162 QPQRRPAAGT 171
P R+ +G+
Sbjct: 983 TPPRQSHSGS 992
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 54.7 bits (130), Expect = 8e-08
Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 44/252 (17%)
Query: 39 PQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSS 98
P +G + + +GS+P+AD +EE AAA A A ++ E AAAA AP +
Sbjct: 47 PAAAESGAKEELQANGSAPAAD------KEEPAAAGSGAASPSAAEKGEPAAAA-APEAG 99
Query: 99 GHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSR------- 151
EK P + + G G +S ++ + E A P+P++
Sbjct: 100 ASPVEKEAPAEGEAAEPGSPTAAEGEAASAAS---STSSPKAEDGATPSPSNETPKKKKK 156
Query: 152 -----------GHRTEKRKPQQPQ----RRPAA--GTGQRRGSRSSPSADQQGAQDRE-- 192
G +K K + + PAA G + G ++ +A+ A +
Sbjct: 157 RFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAA 216
Query: 193 ---EEAAAAPVPTSRGHRTEKRKRQ---QPQCRPAAGTGQRRGSRSSPSADQQRAQDREE 246
EEAAA + G E + ++ P+ PA + + + + ++++A++
Sbjct: 217 APGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPA--SDETKAAEEPSKVEEKKAEEAGA 274
Query: 247 EAAAAPAPTSSG 258
AAA AP+++G
Sbjct: 275 SAAACEAPSAAG 286
Score = 46.2 bits (108), Expect = 3e-05
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 55 SSPSADQQGAQDREEEAAAAPAADQQRAQDR---EEEAAAAPAPTSSGHRTEKRKPQQPQ 111
S +A + A +R EAA A + + Q+ + A+PA SG K + Q
Sbjct: 6 SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESG---AKEELQANG 62
Query: 112 CRPAGGTGQRRGSGS---SPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQR--- 165
PA + +GS SPSA ++G E AAA AP + EK P + +
Sbjct: 63 SAPAADKEEPAAAGSGAASPSAAEKG------EPAAAAAPEAGASPVEKEAPAEGEAAEP 116
Query: 166 -RPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGT 224
P A G+ + SS S+ + E A P P++ + +K++ + +G
Sbjct: 117 GSPTAAEGEAASAASSTSSP-------KAEDGATPSPSNETPKKKKKRFSFKKSFKLSGF 169
Query: 225 GQRRGSRSS---PSADQQRAQDREEEAAAAPAPTSS 257
++ + + A+ A+ ++EAA A ++
Sbjct: 170 SFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAA 205
Score = 45.4 bits (106), Expect = 5e-05
Identities = 48/229 (20%), Positives = 91/229 (39%), Gaps = 28/229 (12%)
Query: 28 EKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREE 87
EK P + P G+ + SS S+ + E A P+ + + +++
Sbjct: 104 EKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKA-------EDGATPSPSNETPKKKKK 156
Query: 88 EAAAAPAPTSSGHRTEKRKPQ-----QPQCRPAGGTGQRRGSGSSPSADQQGAQDREE-- 140
+ + SG +K K + + + A G G++ +A + GA E+
Sbjct: 157 RFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAA 216
Query: 141 ---EAAAAPAPTSRGHRTEKRKPQQ----PQRRPAAGTGQRRGSRSSPSADQQGAQDREE 193
E AAA + G ++ KPQ+ P++ PA+ + + + +++ A++
Sbjct: 217 APGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASD--ETKAAEEPSKVEEKKAEEAGA 274
Query: 194 EAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQ 242
AAA P++ G + P PAA + S+ +A Q AQ
Sbjct: 275 SAAACEAPSAAGPGAPPEQEAAPAEEPAAA-----AASSACAAPSQEAQ 318
Score = 42.0 bits (97), Expect = 6e-04
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 8/152 (5%)
Query: 52 GSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREE----EAAAAPAPTSSGHRTEKRKP 107
G +P+A+ G +D AAA AA+ A + E AAA ++G ++ KP
Sbjct: 182 GEAEAPAAE--GGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKP 239
Query: 108 QQPQCRPAG--GTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQR 165
Q+ P + + + + +++ A++ AAA AP++ G + P
Sbjct: 240 QEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAE 299
Query: 166 RPAAGTGQRRGSRSSPSADQQGAQDREEEAAA 197
PAA + S A + + + AA
Sbjct: 300 EPAAAAASSACAAPSQEAQPECSPEAPPAEAA 331
Score = 32.0 bits (71), Expect = 0.57
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 44 AGGTGQRRGSGSSPSADQQGAQDREEEAAAAPA-ADQQRAQDREEEAAAAPAPTSSGHRT 102
AGG Q + A ++ E +AA P+ ++++A++ AAA AP+++G
Sbjct: 230 AGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAG--- 286
Query: 103 EKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPA 147
P + + PA S + + Q+ + EA A A
Sbjct: 287 -PGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPAEA 330
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 54.7 bits (130), Expect = 8e-08
Identities = 56/220 (25%), Positives = 86/220 (39%), Gaps = 26/220 (11%)
Query: 44 AGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTE 103
A GTG++R S SP Q QD+ A + + AQ + + +A P P +T+
Sbjct: 2232 AAGTGEQRQSKLSPQ--MQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQP-----QTQ 2284
Query: 104 KRKPQQP--QCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQ 161
+ P QP Q +P T S A AQ + + AA P S + Q
Sbjct: 2285 PQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQ 2344
Query: 162 QPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRP- 220
P Q R S+PS G Q + + + P+P + + QPQ +P
Sbjct: 2345 SPS--------QTRIRPSTPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQ 2396
Query: 221 --------AAGTGQRRGSRSSPSADQQRAQDREEEAAAAP 252
++G + + SSPS Q + Q + + A P
Sbjct: 2397 VQSSTQTLSSGQTLNQVTVSSPSRPQLQIQQPQPQVIAVP 2436
Score = 34.7 bits (78), Expect = 0.088
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 25/118 (21%)
Query: 62 QGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQR 121
+G + R + AAPAA E A AP P P P P GG R
Sbjct: 2 RGRRGRPPKQPAAPAA---------ERCAPAPPPP----------PPPPTSGPIGGLRSR 42
Query: 122 -RGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSR 178
RGS A Q E A + RG + +RKP P P + + RG R
Sbjct: 43 HRGSSRGRWAAAQA-----EVAPKTRLSSPRGGSSSRRKPPPPPPAPPSTSAPGRGGR 95
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 54.3 bits (129), Expect = 1e-07
Identities = 52/251 (20%), Positives = 97/251 (38%), Gaps = 15/251 (5%)
Query: 17 ESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPA 76
+ +EG+ E+E + +++ Q + G + P + +G + E E A P
Sbjct: 2151 QDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQP--ESEGIEAPEAEGEAQPE 2208
Query: 77 ADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGT-GQRRGSGSSPSADQQGA 135
+ A + EEEA P + + +P+ G T G+++GS P
Sbjct: 2209 LEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESE-----GETQGEKKGS---PQVSLGDG 2260
Query: 136 QDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEA 195
Q E +++P P R P +RP + TG SS Q + +
Sbjct: 2261 QSEEASESSSPVPEDRPTPPPSPGGDTPHQRPGSQTGPSSSRASSWGNCWQKDSENDHVL 2320
Query: 196 AAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRR----GSRSSPSADQQRAQDREEEAAAA 251
P ++ T +R+ + P + T ++ GSR+ + +E++A +
Sbjct: 2321 GDTRSPDAKSTGTPHAERKATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQEDQALGS 2380
Query: 252 PAPTSSGHRTE 262
APT + R +
Sbjct: 2381 LAPTEAVGRAD 2391
Score = 46.6 bits (109), Expect = 2e-05
Identities = 41/199 (20%), Positives = 72/199 (36%), Gaps = 12/199 (6%)
Query: 35 PQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPA 94
P+ + + QP + + + +G + ++ E A P ++ AQ+ EEEA
Sbjct: 2119 PETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELE 2178
Query: 95 PTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHR 154
+ + +P+ G+ + P + A + EEEA P G
Sbjct: 2179 GVEAPEAEGEAQPESEGIEAPEAEGE-----AQPELEGVEAPEAEEEA----QPEPEGVE 2229
Query: 155 TEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQ 214
T + + + G+++G SP Q E +++PVP R
Sbjct: 2230 TPEAEGEAQPESEGETQGEKKG---SPQVSLGDGQSEEASESSSPVPEDRPTPPPSPGGD 2286
Query: 215 QPQCRPAAGTGQRRGSRSS 233
P RP + TG SS
Sbjct: 2287 TPHQRPGSQTGPSSSRASS 2305
Score = 44.3 bits (103), Expect = 1e-04
Identities = 47/242 (19%), Positives = 86/242 (35%), Gaps = 9/242 (3%)
Query: 17 ESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPA 76
E+ E + ++ E P+ + + QP + + + + +GA+ +E E AA A
Sbjct: 1891 ETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEA 1950
Query: 77 ADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQ 136
Q + + E+ A + + + + A G Q + Q
Sbjct: 1951 EGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQ 2010
Query: 137 DREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAA 196
+ EEEA P S G + K + + + G Q+ + P +D A + EEEA
Sbjct: 2011 EAEEEA----QPESDGVEAQP-KSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQ 2065
Query: 197 AAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTS 256
A + + + A G Q S + A+ ++A AP +
Sbjct: 2066 EAEGEVQEAEGEAHPESEDVDAQEAEGEAQ----PESEGVEAPEAEGEAQKAEGIEAPET 2121
Query: 257 SG 258
G
Sbjct: 2122 EG 2123
Score = 38.5 bits (88), Expect = 0.006
Identities = 53/234 (22%), Positives = 86/234 (36%), Gaps = 29/234 (12%)
Query: 46 GTGQRRGSGSSPSADQQGAQ--DREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTE 103
G G +G G D +G+Q +R+++ A AQ+R E + TS+G
Sbjct: 1731 GPGLSQGPGVDEGEDGEGSQRLNRDKDPKLGEAEGDAMAQER--EGKTHNSETSAGSELG 1788
Query: 104 KRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEE------AAAAPAPTSRGH-RTE 156
+ + + G TG +GSG + + A +++ A AP + G + E
Sbjct: 1789 EAEQEGEGISERGETG-GQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQPE 1847
Query: 157 KRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAP------------VPTSR 204
+ P+ A G Q + P ++ A + E EA P S
Sbjct: 1848 SEGVEAPE---AEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESE 1904
Query: 205 G-HRTEKRKRQQPQCRPA-AGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTS 256
G E K QP+ A + S A+ Q A++ +EA P S
Sbjct: 1905 GAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPES 1958
Score = 34.3 bits (77), Expect = 0.12
Identities = 62/247 (25%), Positives = 83/247 (33%), Gaps = 36/247 (14%)
Query: 29 KTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEE 88
K P P+++ CQ G+ R SS + Q R + + P+ QD
Sbjct: 684 KQVPRPPERRRACQD--GSVPRYSGSSSSTRTQASGNLRPPSSGSLPS------QDLLGT 735
Query: 89 AAAAPAPTSSGHRTEKRKPQQ-PQCRPAGGTGQRRGSGS------SPSADQQGAQDREEE 141
++A P P P AG G R S + S S + GA EE
Sbjct: 736 SSATVTPAVHSDFVSGVSPHNAPSAGWAGDAGSRTCSPAPIPPHTSDSCSKSGAASLGEE 795
Query: 142 AAAAPAPTSRGHRTEKRKPQQPQ-RRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPV 200
A P P+S P Q RP G G S Q G Q +EA P
Sbjct: 796 ARDTPQPSS---------PLVLQVGRPEQGA---VGPHRSHCCSQPGTQP-AQEAQRGPS 842
Query: 201 PTS-----RGHRTEKRKRQQPQCRPAA--GTGQRRGSRSSPSADQQRAQDREEEAAAAPA 253
P + R T R R PQ R ++ TG S + + R+ +P
Sbjct: 843 PEASWLCGRYCPTPPRGRPCPQRRSSSCGSTGSSHQSTARGPGGSPQEGTRQPGPTPSPG 902
Query: 254 PTSSGHR 260
P S R
Sbjct: 903 PNSGASR 909
>gi|74272284 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform c [Homo sapiens]
Length = 1462
Score = 53.5 bits (127), Expect = 2e-07
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 12/179 (6%)
Query: 46 GTGQRRGSGSSPSADQ--QGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPT-SSGHRT 102
GT ++ SG+ D+ +G +D + E AAA ++R+ ++ E + T +
Sbjct: 1284 GTSRKPDSGACRPKDRAPEGRRDAQAERAAAANGPKRRSPEKRREGTRSADNTLERREKH 1343
Query: 103 EKRKPQQPQCRPAGGTGQRRGSGSS---PSADQQGAQDREEEAAAAPAPTSRGHRTEKRK 159
EKR+ P+ R +RR S S ++ Q R E +P R T++R+
Sbjct: 1344 EKRRDVSPERRRERSPTRRRDGSPSRRRRSLERLLEQRRSPERRRGGSPERRAKSTDRRR 1403
Query: 160 PQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQC 218
+ P+RR +R D+ ++REE S H E+R+R +C
Sbjct: 1404 ARSPERRRERSLDKRN------REDRASHREREEANLKQDAGRSSRHPPEQRRRPYKEC 1456
Score = 40.8 bits (94), Expect = 0.001
Identities = 60/257 (23%), Positives = 96/257 (37%), Gaps = 32/257 (12%)
Query: 21 GDQWLE--NEKTKPLRPQQQPQCQPAGGTGQR----RGSGSSPSADQQGAQDREEEAAAA 74
GD+ LE E TK ++ + + GG R RG GS P D + DR A
Sbjct: 1167 GDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRGDGSVPEYDP--SSDRHGPATGP 1224
Query: 75 PAADQQRA-QDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQ- 132
+ RA DR + + + H++ ++ R G+ R P+
Sbjct: 1225 QGVPEVRAGPDRRQHPSLESSYPPDLHKSSPHGEKRAHARDPKGS---REYSRQPNEHHT 1281
Query: 133 -QGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDR 191
G + + A P + E R+ Q +R AA +RR SP ++G +
Sbjct: 1282 WNGTSRKPDSGACRP----KDRAPEGRRDAQAERAAAANGPKRR----SPEKRREGTR-- 1331
Query: 192 EEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRG---SRSSPSADQQRAQDREEEA 248
+A R + EKR+ P+ R +RR SR S ++ Q R E
Sbjct: 1332 -----SADNTLERREKHEKRRDVSPERRRERSPTRRRDGSPSRRRRSLERLLEQRRSPER 1386
Query: 249 AAAPAPTSSGHRTEKRK 265
+P T++R+
Sbjct: 1387 RRGGSPERRAKSTDRRR 1403
Score = 30.8 bits (68), Expect = 1.3
Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 5 QKEQDTRLRKLRESS-----EGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSA 59
+K +D + RE S +G + L Q++ + GG+ +RR +
Sbjct: 1344 EKRRDVSPERRRERSPTRRRDGSPSRRRRSLERLLEQRRSPERRRGGSPERRAKSTDRRR 1403
Query: 60 DQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQC 112
+ + RE D+ ++REE A SS H E+R+ +C
Sbjct: 1404 ARSPERRRERSLDKRNREDRASHREREEANLKQDAGRSSRHPPEQRRRPYKEC 1456
>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
subunit [Homo sapiens]
Length = 2339
Score = 52.0 bits (123), Expect = 5e-07
Identities = 61/238 (25%), Positives = 88/238 (36%), Gaps = 46/238 (19%)
Query: 5 QKEQDTRLRKLRESSEG-------DQWLENEKTKPLRPQQQPQCQ--------------P 43
Q+ RL+ LR S E ++ L T+ LRP + P
Sbjct: 770 QRASQLRLQNLRASCEALYSEMDPEERLRFATTRHLRPDMKTHLDRPLVVELGRDGARGP 829
Query: 44 AGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAA-DQQRAQDREEEAAAAPAPTSSGHRT 102
GG + + + D R + PAA DQ RA+ + E+ G R
Sbjct: 830 VGGKARPEAAEAPEGVDPPRRHHRHRDKDKTPAAGDQDRAEAPKAESG------EPGARE 883
Query: 103 EKRKPQQPQCRPAGGTGQ---RRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRK 159
E+ +P + + A G + RG G P ++ + E AA P R HR +
Sbjct: 884 ERPRPHRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRGSPEEAAEREP--RRHRAHRH- 940
Query: 160 PQQPQRRPAAGTGQRRG-SRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQP 216
Q P + A G+RR R P A + A+ EE A R HR R + QP
Sbjct: 941 -QDPSKECAGAKGERRARHRGGPRAGPREAESGEEPA--------RRHRA--RHKAQP 987
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 51.2 bits (121), Expect = 9e-07
Identities = 64/267 (23%), Positives = 97/267 (36%), Gaps = 49/267 (18%)
Query: 14 KLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAA 73
K R SS W +P P P P + S +A +G R+EEA
Sbjct: 464 KARPSSPSTSW-----HRPASPCPSPG--PGHTLPPKPPSPRGTTASPKGRVRRKEEAKE 516
Query: 74 APAA--------DQQRAQDREEEAAAA---PAPTSSGHRTEKRKPQQPQCRPAGG----T 118
+P+A ++RA + +E AA A P+P S +K Q P P +
Sbjct: 517 SPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTS 576
Query: 119 GQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSR 178
+PS G DREE EKR+ + QR + + R
Sbjct: 577 PPAPAPPVTPSKPMAGTTDREEATRLL---------AEKRRQAREQREREEQERRLQAER 627
Query: 179 SSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQ 238
++Q A++ E A E R+R++ + R A Q +Q
Sbjct: 628 DKRMREEQLAREAEARAE---------REAEARRREEQEAREKAQAEQE---------EQ 669
Query: 239 QRAQDREEEAAAAPAPTSSGHRTEKRK 265
+R Q ++EEA A + R E+ K
Sbjct: 670 ERLQKQKEEAEARSREEAERQRLEREK 696
Score = 42.4 bits (98), Expect = 4e-04
Identities = 57/246 (23%), Positives = 93/246 (37%), Gaps = 55/246 (22%)
Query: 43 PAGGTGQRRGS--GSSPSADQQGAQ-------DREEEAAAAPAADQQRAQDREEEAAAAP 93
P G Q RG G P+ + GA DR +AA P + A+A+P
Sbjct: 318 PRNGRDQGRGCDPGRGPTWGRAGASLARGPQPDRTHPSAAVPVCPRS--------ASASP 369
Query: 94 APTSSGHRTEKRKPQQPQCRPAGGTGQRR--GSGSSPS----------ADQQGAQDREEE 141
S R+ R C PAG G+RR +G SP+ ++ +D+E E
Sbjct: 370 LTPCSVTRSVHR------CAPAGERGERRKPNAGGSPAPVRRRPEASPVQKKEKKDKERE 423
Query: 142 AAAAPAPTSRGHRTEKRK--PQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAP 199
+ +R +KR+ P P+ R +A T +S + + A+P
Sbjct: 424 NEKEKSALARERSLKKRQSLPASPRARLSASTASELSPKSKA---RPSSPSTSWHRPASP 480
Query: 200 VPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGH 259
P+ T K P RG+ +SP +R +EEA +P+
Sbjct: 481 CPSPGPGHTLPPKPPSP-----------RGTTASPKGRVRR----KEEAKESPSAAGPED 525
Query: 260 RTEKRK 265
+++ ++
Sbjct: 526 KSQSKR 531
Score = 41.2 bits (95), Expect = 0.001
Identities = 52/244 (21%), Positives = 95/244 (38%), Gaps = 46/244 (18%)
Query: 40 QCQPAGGTGQRR--GSGSSPSA------------DQQGAQDREEEAAAAPAADQQRAQDR 85
+C PAG G+RR +G SP+ ++ ++RE E + A ++ + R
Sbjct: 381 RCAPAGERGERRKPNAGGSPAPVRRRPEASPVQKKEKKDKERENEKEKSALARERSLKKR 440
Query: 86 EEEAAAAPAPTSSGHRTE-----KRKPQQPQCR--------PAGGTGQR--------RGS 124
+ A+ A S+ +E K +P P P+ G G RG+
Sbjct: 441 QSLPASPRARLSASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGT 500
Query: 125 GSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSAD 184
+SP +G R+EEA +P+ +++ ++ ++ AA SP+
Sbjct: 501 TASP----KGRVRRKEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPT-- 554
Query: 185 QQGAQDREEEAAAAPVPTSRGHRTEKRKRQQP--QCRPAAGTGQRRGSRSSPSADQQRAQ 242
++E A PT T P +P AGT R + + +++A+
Sbjct: 555 ---PAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAR 611
Query: 243 DREE 246
++ E
Sbjct: 612 EQRE 615
Score = 37.4 bits (85), Expect = 0.014
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 26/176 (14%)
Query: 7 EQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQD 66
E+ + R+ RE E ++ L+ E+ K +R +Q + + R + + ++ +
Sbjct: 605 EKRRQAREQREREEQERRLQAERDKRMREEQLAR------EAEARAEREAEARRREEQEA 658
Query: 67 REEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRK--PQQPQCRP---------- 114
RE+ A A +Q+R Q ++EEA A + R E+ K QQ Q R
Sbjct: 659 REK--AQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQQQEQERQERRKRLEEIM 716
Query: 115 ----AGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRK--PQQPQ 164
+ + S A+ G+ +A A +P + +K + PQ+PQ
Sbjct: 717 KRTRKSEVSETKQKQDSKEANANGSSPEPVKAVEARSPGLQKEAVQKEEPIPQEPQ 772
Score = 33.9 bits (76), Expect = 0.15
Identities = 41/195 (21%), Positives = 66/195 (33%), Gaps = 19/195 (9%)
Query: 56 SPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPA 115
+PS G DREE +Q + RE E +KR ++ R A
Sbjct: 585 TPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAER----DKRMREEQLAREA 640
Query: 116 GGTGQRRGSGSSPSADQQGAQDREEEAAA--APAPTSRGHRTEKRKPQQPQRRPAAGTGQ 173
+R A+ REE+ A A A R +K+K + R Q
Sbjct: 641 EARAEREAE----------ARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQ 690
Query: 174 RRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQ---RRGS 230
R +Q Q+R + T + +E +++Q + A G+ +
Sbjct: 691 RLEREKHFQQQEQERQERRKRLEEIMKRTRKSEVSETKQKQDSKEANANGSSPEPVKAVE 750
Query: 231 RSSPSADQQRAQDRE 245
SP ++ Q E
Sbjct: 751 ARSPGLQKEAVQKEE 765
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 50.8 bits (120), Expect = 1e-06
Identities = 50/265 (18%), Positives = 97/265 (36%), Gaps = 4/265 (1%)
Query: 2 KPRQKEQDTRLRKLRE-SSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSAD 60
K R +++D + R+ E ++ + E+ + ++ Q + T + G D
Sbjct: 85 KDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTD 144
Query: 61 QQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQ 120
Q ++R+ +A R + R+ E +R E+R+ ++ Q T
Sbjct: 145 GQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERER-QREKENKTED 203
Query: 121 RRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSS 180
R ++ + E R +TE+ + +Q +R A+ R
Sbjct: 204 RHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERE 263
Query: 181 PSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQR 240
D+ +DR ++ R RTE R R+ + R +R R+ +++R
Sbjct: 264 RERDRDRDRDRRQKERERQTDRKRQRRTE-RDRETERKRERQRERERERERNR-KRERER 321
Query: 241 AQDREEEAAAAPAPTSSGHRTEKRK 265
++RE E R KRK
Sbjct: 322 ERERERERQRETERDREKERERKRK 346
Score = 48.5 bits (114), Expect = 6e-06
Identities = 54/268 (20%), Positives = 108/268 (40%), Gaps = 12/268 (4%)
Query: 4 RQKEQDTRLRKLRESSEGDQW-LENEKTKPLRPQQQPQCQPAGGTGQRRGS-GSSPSADQ 61
+++E+ T + R++ Q E EK + R +++ Q + T R G ++
Sbjct: 157 KERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERER 216
Query: 62 QGAQDREEEAAAAPAADQQRA--QDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTG 119
+ + E + D+QR ++RE++A A R ++R+ ++ + R
Sbjct: 217 ETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQ 276
Query: 120 QRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRS 179
+ R + ++ +DRE E R RK ++ + R QR R
Sbjct: 277 KERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERD 336
Query: 180 SPSADQQGAQDREEEAAAAPVPTSR-GHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQ 238
++ + + E T R G R +R+R++ + R R+ +R ++
Sbjct: 337 REKERERKRKRQTEMDRERNRQTGREGRRQAERERERERER------DRQSAREREERER 390
Query: 239 QRAQDREEEAAAAPAPTSSGHR-TEKRK 265
R +DR++E G R TEK++
Sbjct: 391 DRDRDRQKERERQTEKDRDGQRETEKQR 418
Score = 45.8 bits (107), Expect = 4e-05
Identities = 54/264 (20%), Positives = 96/264 (36%), Gaps = 16/264 (6%)
Query: 2 KPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQ 61
+ R+KE T R E ++ E E + Q + T + R A++
Sbjct: 193 RQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTERER----EKQAER 248
Query: 62 QGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQR 121
+ A +RE E ++ R +DR+ T + + ++ + + +
Sbjct: 249 ERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERE 308
Query: 122 RGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSP 181
R + +++ ++RE E R KRK Q R R G R
Sbjct: 309 RERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRR--- 365
Query: 182 SADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRA 241
A+++ ++RE + +A R R R R + + R R G R + ++R
Sbjct: 366 QAERERERERERDRQSA---REREERERDRDRDRQKERERQTEKDRDGQRET-EKQRERE 421
Query: 242 QDREEEAAAAPAPTSSGHRTEKRK 265
+DRE E G EK+K
Sbjct: 422 KDRESERG-----RERGREREKQK 440
Score = 42.4 bits (98), Expect = 4e-04
Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 24/249 (9%)
Query: 2 KPRQKEQDTR--LRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSA 59
+P +E R L + + ++GD N + + R +++ Q +
Sbjct: 30 RPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTER--------------ET 75
Query: 60 DQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTG 119
D++ + RE++ ++R +DRE+E R ++R Q+ + R G
Sbjct: 76 DRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREG 135
Query: 120 QRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRS 179
+R G D Q ++R+ +A + R + + + + R Q R R
Sbjct: 136 ER---GRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERE 192
Query: 180 SPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRS-SPSADQ 238
+ +DR E +RKRQ + R QR+ R A++
Sbjct: 193 RQREKENKTEDRHSERGRERERERETETETERKRQTDRERDR----QRKTEREREKQAER 248
Query: 239 QRAQDREEE 247
+RA +RE E
Sbjct: 249 ERASERETE 257
Score = 35.8 bits (81), Expect = 0.040
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 121 RRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRS- 179
RR GS S ++G ++A +R E+R+ ++ R +RR +
Sbjct: 28 RRRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDR 87
Query: 180 --SPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSAD 237
++ +DRE+E R ++R RQ+ + R G+R R + D
Sbjct: 88 HRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQT---D 144
Query: 238 QQRAQDREEEA 248
QR ++R+ +A
Sbjct: 145 GQRERERQRDA 155
Score = 31.6 bits (70), Expect = 0.75
Identities = 25/145 (17%), Positives = 52/145 (35%), Gaps = 5/145 (3%)
Query: 104 KRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQP 163
+R+P + G GQ ++ ++RE + E+R+ +
Sbjct: 28 RRRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDR 87
Query: 164 QRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAG 223
R+ + R + +++ DRE + + R + +R+ + R
Sbjct: 88 HRK----RDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQT 143
Query: 224 TGQRRGSRS-SPSADQQRAQDREEE 247
GQR R +++R DRE +
Sbjct: 144 DGQRERERQRDAEKERERQTDRERQ 168
Score = 30.4 bits (67), Expect = 1.7
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 24/183 (13%)
Query: 2 KPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQ--------QPQCQPAGGTGQRRGS 53
+ R++E+D + + RE E D+ + +K + + ++ + Q + RG
Sbjct: 371 RERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGR 430
Query: 54 GSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCR 113
++Q ++R+ E A +QR + P P ++ + P R
Sbjct: 431 ERGREREKQKGRERDRERQTDRQAGRQR---KRSTLYVNPPPRTARSGVVQSDPN----R 483
Query: 114 PAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRK--PQQPQRRPAAGT 171
P G + SSP D + A R PA SRG +R+ P+ ++R G
Sbjct: 484 PTRGIRWK----SSPE-DPKAASTR--FPWGRPAKASRGRVAGRRRWEPRLGEKRGQGGE 536
Query: 172 GQR 174
G+R
Sbjct: 537 GRR 539
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 50.8 bits (120), Expect = 1e-06
Identities = 56/248 (22%), Positives = 97/248 (39%), Gaps = 42/248 (16%)
Query: 46 GTGQRRGSGSSPSADQQGAQDREEEA----AAAPAADQQRAQDREEEAAAAPAPTSSGHR 101
GT +R +P + + EE+ AAA + Q+R R+ + +++ + +SS
Sbjct: 444 GTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSE 503
Query: 102 TEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEA------------------A 143
E+ K + G G+RR S SA + ++E + +
Sbjct: 504 DERPKRSHVK---NGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRS 560
Query: 144 AAPAPTSRGHRT-----EKRKPQQPQRRPAAGTG------QRRGSRSSPSADQQGAQDRE 192
+PAP R RT +R P P RR + QRR S S P + +
Sbjct: 561 PSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPP 620
Query: 193 EEAAAAPVPTSR---GHRTEKRKRQQPQCR---PAAGTGQRRGSRSSPSADQQRAQDREE 246
+ A+P P + H ++R P + P+ + R+GS S S + R+ +
Sbjct: 621 PKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNK 680
Query: 247 EAAAAPAP 254
+ +P P
Sbjct: 681 RHSPSPRP 688
Score = 47.0 bits (110), Expect = 2e-05
Identities = 54/291 (18%), Positives = 120/291 (41%), Gaps = 31/291 (10%)
Query: 3 PRQKEQDTRLRK--LRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSAD 60
P E ++++ ++E++ L+ K +P+ ++P P + + + +
Sbjct: 221 PELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPS--PEKNSKKEKEKEKTRPRS 278
Query: 61 QQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTE--------KRKPQQPQC 112
+ ++ R + +P+ + R + R + +P S R +R P P+
Sbjct: 279 RSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRH 338
Query: 113 RPAGGTGQRR--------GSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQ 164
R + +RR GS SS S+ + + ++ + P + P + +
Sbjct: 339 RRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRR 398
Query: 165 RRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTS----RGHRTEKRKRQQPQCRP 220
RP+ +R SP+ QQ + R+ + +P TS + TEKR+ P +P
Sbjct: 399 HRPSPPATPPPKTRHSPT-PQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKP 457
Query: 221 ----AAGTGQRRGSR--SSPSADQQRAQDREEEAAAAPAPTSSGHRTEKRK 265
+ + + +G + ++ S Q+R R+ + +++ + +SS E+ K
Sbjct: 458 RKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPK 508
Score = 40.0 bits (92), Expect = 0.002
Identities = 45/216 (20%), Positives = 76/216 (35%), Gaps = 23/216 (10%)
Query: 49 QRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQ 108
+RR S S P + + + + + + R A +P P + +P+
Sbjct: 632 KRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNK--RHSPSPRPR 689
Query: 109 QPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPA 168
PQ + RRG+ SSP Q +P+P++R R R P+ + + A
Sbjct: 690 APQTS-SSPPPVRRGASSSPQRRQ------------SPSPSTRPIRRVSRTPEPKKIKKA 736
Query: 169 AGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRR 228
A + R S S G+ E A P P S + Q P + ++
Sbjct: 737 ASPSPQSVRRVSSSRSVSGSP--EPAAKKPPAPPS------PVQSQSPSTNWSPAVPVKK 788
Query: 229 GSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTEKR 264
+PS R D+E H+ +K+
Sbjct: 789 AKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKK 824
Score = 37.7 bits (86), Expect = 0.010
Identities = 40/226 (17%), Positives = 79/226 (34%), Gaps = 14/226 (6%)
Query: 49 QRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQ 108
+RR S S + + R P + + + +P HR
Sbjct: 348 RRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATP 407
Query: 109 QPQCR------PAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQ 162
P+ R + T + R S S + + + E +P+P + + E + ++
Sbjct: 408 PPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEE 467
Query: 163 PQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGH----RTEKRKRQQPQC 218
+ A + R +QQ + D +++ R H +R+R P
Sbjct: 468 DKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPS- 526
Query: 219 RPAAGTGQRRGSRSSPSADQQRAQD---REEEAAAAPAPTSSGHRT 261
R A+ + ++R +SP ++R+ + +PAP RT
Sbjct: 527 RSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRT 572
Score = 37.7 bits (86), Expect = 0.010
Identities = 38/237 (16%), Positives = 86/237 (36%), Gaps = 21/237 (8%)
Query: 28 EKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREE 87
+++ P+ ++ P + GSSPS + A+ + +P+ + R
Sbjct: 643 QRSSPVTKRRSPSLS------SKHRKGSSPSRSTREARSPQPNKRHSPSP-----RPRAP 691
Query: 88 EAAAAPAPTSSGHRT--EKRKPQQPQCRPAGGTGQ-------RRGSGSSPSADQQGAQDR 138
+ +++P P G + ++R+ P RP + ++ + SP + ++ + R
Sbjct: 692 QTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSR 751
Query: 139 EEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAA 198
+ PA + Q P + ++ +PS D+E
Sbjct: 752 SVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKK 811
Query: 199 PVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQD-REEEAAAAPAP 254
+ H+ +K+ ++ + + + +P+A +EE AAP P
Sbjct: 812 KKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTTLAQEEPVAAPEP 868
Score = 30.4 bits (67), Expect = 1.7
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 24/161 (14%)
Query: 120 QRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRS 179
++ S D+ E+E++ SR R K + P+RR + +R+ S S
Sbjct: 139 EKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHS 198
Query: 180 ------SPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQ------- 226
+ S A +++E+ P P+ K ++P + A T
Sbjct: 199 RSPRHRTKSRSPSPAPEKKEKTPELPEPSV--------KVKEPSVQEATSTSDILKVPKP 250
Query: 227 ---RRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTEKR 264
SP + ++ +++E+ + + + S RT R
Sbjct: 251 EPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSR 291
>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
Length = 793
Score = 50.8 bits (120), Expect = 1e-06
Identities = 65/243 (26%), Positives = 84/243 (34%), Gaps = 57/243 (23%)
Query: 34 RPQQQPQCQPAGG-------TGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDRE 86
RP++ P P+ G G RRG P Q + RE+E PA RA D
Sbjct: 88 RPREPPAAAPSAGGAAPCSPRGARRGE---PPQQQPRRRRREKEPEEEPAGAAARAAD-- 142
Query: 87 EEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSP---SADQQGAQDREEEAA 143
AA P S R P G G + G P +A GAQ R AA
Sbjct: 143 --AACNGLPGSDSRRA-----------PGKGGGSKGSPGQRPPVPAAAAAGAQARASCAA 189
Query: 144 AAPAPTSRGHRTEKR---KPQQPQRRPAAGTGQRRGSRSSPSADQQGA-QDREEEAAAAP 199
A + P + P + T + + +R+ P+ D +GA ++REE A A P
Sbjct: 190 AKTQGRCCWECLQNNLAVLPGELGALPHSATAEEKPARALPAQDDRGASREREEGALAEP 249
Query: 200 VPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGH 259
P PA SP A + A R A P P G
Sbjct: 250 APV-----------------PAVA--------HSPPATVEAATSRASPPALLPGPAPRGD 284
Query: 260 RTE 262
R E
Sbjct: 285 RPE 287
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 50.4 bits (119), Expect = 2e-06
Identities = 59/239 (24%), Positives = 90/239 (37%), Gaps = 33/239 (13%)
Query: 46 GTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKR 105
G Q G+G P AD AAAA AA AQ R A +P + G + R
Sbjct: 318 GGPQDGGAGKGP-ADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLAR 376
Query: 106 KPQQPQCRPAGGTGQRRG---SGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQ 162
PQ P G+ R G++P + QQG ++ P G +T +R P
Sbjct: 377 TPQPSS--PMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPG-QPYGSQTPQRYPMT 433
Query: 163 PQRRPAAGTGQRRGSRSSPSADQQG-----------------AQDREEEAAAAPVPTSRG 205
Q R + G ++ P QQG ++++ + P S+
Sbjct: 434 MQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQT 493
Query: 206 HRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTEKR 264
+ +QQPQ +P + S P QQ +Q ++ +PAP S T ++
Sbjct: 494 PHAQPSYQQQPQSQPP------QLQSSQPPYSQQPSQPPHQQ---SPAPYPSQQSTTQQ 543
Score = 47.0 bits (110), Expect = 2e-05
Identities = 53/230 (23%), Positives = 90/230 (39%), Gaps = 25/230 (10%)
Query: 28 EKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQG-AQDREEEAAAAPAADQQRAQDRE 86
+ + P+ + + QP GGT PS QQG + + P Q R
Sbjct: 379 QPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRA 438
Query: 87 EEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAP 146
+ A + T ++ P Q P+ G GQ+ G +P +QQ ++++ +
Sbjct: 439 QSAMGGLSYT-------QQIPPYGQQGPS-GYGQQ---GQTPYYNQQSPHPQQQQPPYSQ 487
Query: 147 APTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGH 206
P S+ + QQPQ +P + S P QQ +Q ++ + AP P+ +
Sbjct: 488 QPPSQTPHAQPSYQQQPQSQPP------QLQSSQPPYSQQPSQPPHQQ-SPAPYPSQQST 540
Query: 207 RTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTS 256
+ + Q P +P A + ++ QQ A + AA P P S
Sbjct: 541 TQQHPQSQPPYSQPQAQSPYQQ------QQPQQPAPSTLSQQAAYPQPQS 584
Score = 40.0 bits (92), Expect = 0.002
Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 24/169 (14%)
Query: 35 PQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPA 94
P Q Q P + + PS QQ + ++ P QQ +Q +++ PA
Sbjct: 476 PHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS---PA 532
Query: 95 PTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHR 154
P S T + Q PQ +P P + Q +++ PAP++ +
Sbjct: 533 PYPSQQSTTQ---QHPQSQP-------------PYSQPQAQSPYQQQQPQQPAPSTLSQQ 576
Query: 155 TEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTS 203
+PQ Q + A + QR S D G+Q A++AP TS
Sbjct: 577 AAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQ-----ASSAPSMTS 620
Score = 38.5 bits (88), Expect = 0.006
Identities = 55/205 (26%), Positives = 69/205 (33%), Gaps = 30/205 (14%)
Query: 59 ADQQGAQDREEEAAAAPAADQ---QRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPA 115
A+QQ ++ EAAAA AA++ + A +E E A P G +
Sbjct: 27 AEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGPAVGPPQPLGKELQDGAESN-----G 81
Query: 116 GGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRR 175
GG G GSG P A+ + A P P + TE P G G
Sbjct: 82 GGGGGGAGSGGGPGAE---PDLKNSNGNAGPRPALNNNLTEP---------PGGGGG--- 126
Query: 176 GSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPS 235
GS A A AAA P P + R AA Q+ G + SP
Sbjct: 127 GSSDGVGAPPHSA------AAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPG 180
Query: 236 -ADQQRAQDREEEAAAAPAPTSSGH 259
A Q E A P S H
Sbjct: 181 LAALQSGGGGGLEPYAGPQQNSHDH 205
Score = 28.1 bits (61), Expect = 8.3
Identities = 43/172 (25%), Positives = 58/172 (33%), Gaps = 34/172 (19%)
Query: 89 AAAAPAPTSSGHR------TEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEA 142
A APA SS +E +K +Q Q AG G+ + ++ + + A +E E
Sbjct: 3 AQVAPAAASSLGNPPPPPPSELKKAEQQQREEAG--GEAAAAAAAERGEMKAAAGQESEG 60
Query: 143 AAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPT 202
A P G ++ Q G G GS P A+ + A P P
Sbjct: 61 PAVGPPQPLG-----KELQDGAESNGGGGGGGAGSGGGPGAE---PDLKNSNGNAGPRPA 112
Query: 203 SRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAP 254
+ TE P G G GS A A AAA P P
Sbjct: 113 LNNNLTEP---------PGGGGG---GSSDGVGAPPHSA------AAALPPP 146
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 50.4 bits (119), Expect = 2e-06
Identities = 59/239 (24%), Positives = 90/239 (37%), Gaps = 33/239 (13%)
Query: 46 GTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKR 105
G Q G+G P AD AAAA AA AQ R A +P + G + R
Sbjct: 318 GGPQDGGAGKGP-ADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLAR 376
Query: 106 KPQQPQCRPAGGTGQRRG---SGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQ 162
PQ P G+ R G++P + QQG ++ P G +T +R P
Sbjct: 377 TPQPSS--PMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPG-QPYGSQTPQRYPMT 433
Query: 163 PQRRPAAGTGQRRGSRSSPSADQQG-----------------AQDREEEAAAAPVPTSRG 205
Q R + G ++ P QQG ++++ + P S+
Sbjct: 434 MQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQT 493
Query: 206 HRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTEKR 264
+ +QQPQ +P + S P QQ +Q ++ +PAP S T ++
Sbjct: 494 PHAQPSYQQQPQSQPP------QLQSSQPPYSQQPSQPPHQQ---SPAPYPSQQSTTQQ 543
Score = 47.0 bits (110), Expect = 2e-05
Identities = 53/230 (23%), Positives = 90/230 (39%), Gaps = 25/230 (10%)
Query: 28 EKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQG-AQDREEEAAAAPAADQQRAQDRE 86
+ + P+ + + QP GGT PS QQG + + P Q R
Sbjct: 379 QPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRA 438
Query: 87 EEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAP 146
+ A + T ++ P Q P+ G GQ+ G +P +QQ ++++ +
Sbjct: 439 QSAMGGLSYT-------QQIPPYGQQGPS-GYGQQ---GQTPYYNQQSPHPQQQQPPYSQ 487
Query: 147 APTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGH 206
P S+ + QQPQ +P + S P QQ +Q ++ + AP P+ +
Sbjct: 488 QPPSQTPHAQPSYQQQPQSQPP------QLQSSQPPYSQQPSQPPHQQ-SPAPYPSQQST 540
Query: 207 RTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTS 256
+ + Q P +P A + ++ QQ A + AA P P S
Sbjct: 541 TQQHPQSQPPYSQPQAQSPYQQ------QQPQQPAPSTLSQQAAYPQPQS 584
Score = 40.0 bits (92), Expect = 0.002
Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 24/169 (14%)
Query: 35 PQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPA 94
P Q Q P + + PS QQ + ++ P QQ +Q +++ PA
Sbjct: 476 PHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS---PA 532
Query: 95 PTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHR 154
P S T + Q PQ +P P + Q +++ PAP++ +
Sbjct: 533 PYPSQQSTTQ---QHPQSQP-------------PYSQPQAQSPYQQQQPQQPAPSTLSQQ 576
Query: 155 TEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTS 203
+PQ Q + A + QR S D G+Q A++AP TS
Sbjct: 577 AAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQ-----ASSAPSMTS 620
Score = 38.5 bits (88), Expect = 0.006
Identities = 55/205 (26%), Positives = 69/205 (33%), Gaps = 30/205 (14%)
Query: 59 ADQQGAQDREEEAAAAPAADQ---QRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPA 115
A+QQ ++ EAAAA AA++ + A +E E A P G +
Sbjct: 27 AEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGPAVGPPQPLGKELQDGAESN-----G 81
Query: 116 GGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRR 175
GG G GSG P A+ + A P P + TE P G G
Sbjct: 82 GGGGGGAGSGGGPGAE---PDLKNSNGNAGPRPALNNNLTEP---------PGGGGG--- 126
Query: 176 GSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPS 235
GS A A AAA P P + R AA Q+ G + SP
Sbjct: 127 GSSDGVGAPPHSA------AAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPG 180
Query: 236 -ADQQRAQDREEEAAAAPAPTSSGH 259
A Q E A P S H
Sbjct: 181 LAALQSGGGGGLEPYAGPQQNSHDH 205
Score = 28.1 bits (61), Expect = 8.3
Identities = 43/172 (25%), Positives = 58/172 (33%), Gaps = 34/172 (19%)
Query: 89 AAAAPAPTSSGHR------TEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEA 142
A APA SS +E +K +Q Q AG G+ + ++ + + A +E E
Sbjct: 3 AQVAPAAASSLGNPPPPPPSELKKAEQQQREEAG--GEAAAAAAAERGEMKAAAGQESEG 60
Query: 143 AAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPT 202
A P G ++ Q G G GS P A+ + A P P
Sbjct: 61 PAVGPPQPLG-----KELQDGAESNGGGGGGGAGSGGGPGAE---PDLKNSNGNAGPRPA 112
Query: 203 SRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAP 254
+ TE P G G GS A A AAA P P
Sbjct: 113 LNNNLTEP---------PGGGGG---GSSDGVGAPPHSA------AAALPPP 146
>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
Length = 1007
Score = 50.4 bits (119), Expect = 2e-06
Identities = 53/255 (20%), Positives = 113/255 (44%), Gaps = 15/255 (5%)
Query: 2 KPRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQ-PAGGTGQRRGSGSSPSAD 60
K R KE+ TR R ++ S+G + EKT + +++ + + P+ + + + S S
Sbjct: 185 KSRSKER-TRHRSDKKKSKGGIEIVKEKTTRSKSKERKKSKSPSKRSKSQDQARKSKSPT 243
Query: 61 QQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQ 120
+ + A +P D+ + +D+ + +P + R+ R + G +
Sbjct: 244 LRRRSQEKIGKARSPTDDKVKIEDKSKSKDRKKSPIINESRSRDRGKKSRSPVDLRGKSK 303
Query: 121 RRGSGSSPSADQQGAQDREEEAAAAP---APTSRGHRTEKRKPQQPQRRPAAGTGQRRGS 177
R S S ++ D+E++ +P A + + +R+ R+P + +R + R S
Sbjct: 304 DRRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSPSRRPGRSPKRRSLSPKPRDKS 363
Query: 178 RSSPSA---DQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSP 234
R S S D++ Q + +P ++ R+ +RKR++P+ R + R+ P
Sbjct: 364 RRSRSPLLNDRRSKQSKSPSRTLSPGRRAKS-RSLERKRREPERR------RLSSPRTRP 416
Query: 235 SADQQRAQDREEEAA 249
D ++R ++A+
Sbjct: 417 RDDILSRRERSKDAS 431
Score = 44.3 bits (103), Expect = 1e-04
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 16/191 (8%)
Query: 81 RAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREE 140
R++ +E + + +P+ S + + RK + P R + ++ G SP+ D+ +D+ +
Sbjct: 214 RSKSKERKKSKSPSKRSKS-QDQARKSKSPTLRRR--SQEKIGKARSPTDDKVKIEDKSK 270
Query: 141 EAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPV 200
+P R+ R + G + R SRS ++ D+E++ P+
Sbjct: 271 SKDRKKSPIINESRSRDRGKKSRSPVDLRGKSKDRRSRSKERKSKRSETDKEKK----PI 326
Query: 201 PTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQR------AQDREEEAAAAPAP 254
+ + ++ + P RP G +R S S D+ R DR + + +P+
Sbjct: 327 KSPSKDASSGKENRSPSRRP--GRSPKRRSLSPKPRDKSRRSRSPLLNDRRSKQSKSPSR 384
Query: 255 T-SSGHRTEKR 264
T S G R + R
Sbjct: 385 TLSPGRRAKSR 395
Score = 34.7 bits (78), Expect = 0.088
Identities = 49/216 (22%), Positives = 78/216 (36%), Gaps = 45/216 (20%)
Query: 4 RQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQG 63
R K +D R R S+ +E K +P + P + G R SPS + G
Sbjct: 299 RGKSKDRRSRSKERKSK-----RSETDKEKKPIKSPSKDASSGKENR-----SPSR-RPG 347
Query: 64 AQDREEEAAAAPAADQQRAQ-----DREEEAAAAPAPT-SSGHRT------------EKR 105
+ + P +R++ DR + + +P+ T S G R E+R
Sbjct: 348 RSPKRRSLSPKPRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKSRSLERKRREPERR 407
Query: 106 KPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAA------APAPTSRGHRTEKRK 159
+ P+ RP RR S + + R + +P SR R R
Sbjct: 408 RLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRSRSPRRRSRS 467
Query: 160 PQQP----------QRRPAAGTGQRRGSRSSPSADQ 185
P++ +RR + G+RR SRS D+
Sbjct: 468 PRRRDRGRRSRSRLRRRSRSRGGRRRRSRSKVKEDK 503
>gi|239750916 PREDICTED: similar to hCG1803335 [Homo sapiens]
Length = 246
Score = 50.1 bits (118), Expect = 2e-06
Identities = 50/215 (23%), Positives = 78/215 (36%), Gaps = 26/215 (12%)
Query: 58 SADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQ-----QPQC 112
S Q+ A+ E R R E+ P GHR R + Q QC
Sbjct: 38 SLHQRSARATESVPGPQSQCQGHRVSSRATESVPGPQSQFQGHRVSARATESVPGPQSQC 97
Query: 113 RPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSR--GHRTEKRKPQQ---PQRRP 167
+ + + S P + +QG + +AP P S+ GHR R + PQ
Sbjct: 98 QGHRVSSRATESVPGPQSQRQGHRVSARATESAPGPQSQCQGHRVSARATESVPGPQ--- 154
Query: 168 AAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQR 227
QR+G R S R E+A P +GHR R + + G R
Sbjct: 155 ----SQRQGHRVS---------SRATESAPGPQSQFQGHRVSARATESVPGPQSQRQGHR 201
Query: 228 RGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTE 262
SR++ S ++Q + +A + G +++
Sbjct: 202 VSSRATESVPGPQSQFQGHRVSARATESVPGPQSQ 236
Score = 46.6 bits (109), Expect = 2e-05
Identities = 45/187 (24%), Positives = 67/187 (35%), Gaps = 20/187 (10%)
Query: 98 SGHRTEKRKPQQPQCRPAGGTGQRRGSGSS----PSADQQGAQDREEEAAAAPAPTSR-- 151
S H + + +PQ + QR + P + QG + + P P S+
Sbjct: 19 SCHHSWHPQTPKPQIKAHDSLHQRSARATESVPGPQSQCQGHRVSSRATESVPGPQSQFQ 78
Query: 152 GHRTEKRKPQQPQRRPAAGTGQRRGSRSS-----PSADQQG--AQDREEEAAAAPVPTSR 204
GHR R + + G R SR++ P + +QG R E+A P +
Sbjct: 79 GHRVSARATESVPGPQSQCQGHRVSSRATESVPGPQSQRQGHRVSARATESAPGPQSQCQ 138
Query: 205 GHRTEKRKRQQ---PQCRPAAGTGQRRGSRSSPSADQQ----RAQDREEEAAAAPAPTSS 257
GHR R + PQ + R + S+P Q R R E+ P
Sbjct: 139 GHRVSARATESVPGPQSQRQGHRVSSRATESAPGPQSQFQGHRVSARATESVPGPQSQRQ 198
Query: 258 GHRTEKR 264
GHR R
Sbjct: 199 GHRVSSR 205
Score = 41.6 bits (96), Expect = 7e-04
Identities = 35/135 (25%), Positives = 50/135 (37%), Gaps = 11/135 (8%)
Query: 35 PQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQ----RAQDREEEAA 90
P Q QCQ + + S P + +QG + +AP Q R R E+
Sbjct: 91 PGPQSQCQGHRVSSRATESVPGPQSQRQGHRVSARATESAPGPQSQCQGHRVSARATESV 150
Query: 91 AAPAPTSSGHRTEKRKPQQ---PQCRPAGGTGQRRGSGS--SPSADQQGAQDREEEAAAA 145
P GHR R + PQ + G R + S P + +QG + +
Sbjct: 151 PGPQSQRQGHRVSSRATESAPGPQSQFQGHRVSARATESVPGPQSQRQGHRVSSRATESV 210
Query: 146 PAPTS--RGHRTEKR 158
P P S +GHR R
Sbjct: 211 PGPQSQFQGHRVSAR 225
Score = 35.0 bits (79), Expect = 0.068
Identities = 32/124 (25%), Positives = 45/124 (36%), Gaps = 11/124 (8%)
Query: 39 PQCQPAGGTGQRRGSGSSPSADQQ----GAQDREEEAAAAPAADQQ--RAQDREEEAAAA 92
PQ Q G R + S+P Q R E+ P + +Q R R E+A
Sbjct: 113 PQSQRQGHRVSARATESAPGPQSQCQGHRVSARATESVPGPQSQRQGHRVSSRATESAPG 172
Query: 93 PAPTSSGHRTEKRKPQQ---PQCRPAGGTGQRRGSGS--SPSADQQGAQDREEEAAAAPA 147
P GHR R + PQ + G R + S P + QG + + P
Sbjct: 173 PQSQFQGHRVSARATESVPGPQSQRQGHRVSSRATESVPGPQSQFQGHRVSARATESVPG 232
Query: 148 PTSR 151
P S+
Sbjct: 233 PQSQ 236
Score = 34.7 bits (78), Expect = 0.088
Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 7/106 (6%)
Query: 35 PQQQPQCQPAGGTGQRRGSGSSPSADQQG--AQDREEEAAAAPAADQQ--RAQDREEEAA 90
P Q QCQ + + S P + +QG R E+A P + Q R R E+
Sbjct: 131 PGPQSQCQGHRVSARATESVPGPQSQRQGHRVSSRATESAPGPQSQFQGHRVSARATESV 190
Query: 91 AAPAPTSSGHRTEKRKPQQ---PQCRPAGGTGQRRGSGSSPSADQQ 133
P GHR R + PQ + G R + S P Q
Sbjct: 191 PGPQSQRQGHRVSSRATESVPGPQSQFQGHRVSARATESVPGPQSQ 236
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 50.1 bits (118), Expect = 2e-06
Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 24/261 (9%)
Query: 13 RKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAA 72
+KL S + KT + + + GSGSS S + + +
Sbjct: 527 KKLGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRS 586
Query: 73 AAPAA-DQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSAD 131
+ ++ R++ R ++ +P+PT S HR R +P P G G++ +P
Sbjct: 587 SRHSSFSGSRSRSRSFSSSPSPSPTPSPHRPSIRTKGEP-APPPGKAGEKSVKKPAPPPA 645
Query: 132 QQGAQDREEEAAAAPAPTSRGHRTEKRKPQQ-----PQRRPAAGTGQRRGSRSSPSADQQ 186
A + A P PT G E R+ ++ P+RR +G+G GS S S+ +
Sbjct: 646 PPQA---TKTTAPVPEPTKPGDPREARRKERPARTPPRRRTLSGSGSGSGSSYSGSSSRS 702
Query: 187 G--AQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDR 244
+ ++A +S H + P + R SP+ AQ R
Sbjct: 703 RSLSVSSVSSVSSATSSSSSAHSVDSEDMYADLASPVSSASSR-----SPAP----AQTR 753
Query: 245 EEEAAAAPAPTSSGHRTEKRK 265
+E+ + G + EKRK
Sbjct: 754 KEK---GKSKKEDGVKEEKRK 771
Score = 48.5 bits (114), Expect = 6e-06
Identities = 52/268 (19%), Positives = 107/268 (39%), Gaps = 16/268 (5%)
Query: 4 RQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQG 63
RQ+E++ + RE + E E+ ++Q + + +R D+
Sbjct: 413 RQRERERERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEKDRQHRDRDR 472
Query: 64 AQDREEEAAA----APAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTG 119
++RE+E +P ++A+ ++EAA ++G + ++ + R +
Sbjct: 473 EKEREKEKGKPKPRSPQPPSRQAEPPKKEAA------TTGPQVKRADEWKDPWRRSKSPK 526
Query: 120 QRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRS 179
++ G SPS ++ + A+A+ + S + + R + + SRS
Sbjct: 527 KKLGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRS 586
Query: 180 SPSADQQGAQDREE--EAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSAD 237
S + G++ R ++ +P PT HR R + +P P G++ + +P
Sbjct: 587 SRHSSFSGSRSRSRSFSSSPSPSPTPSPHRPSIRTKGEP-APPPGKAGEKSVKKPAPPPA 645
Query: 238 QQRAQDREEEAAAAPAPTSSGHRTEKRK 265
+A + A P PT G E R+
Sbjct: 646 PPQA---TKTTAPVPEPTKPGDPREARR 670
Score = 32.0 bits (71), Expect = 0.57
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Query: 57 PSADQQGAQDREEEAAAAPAADQQRAQDREEEA-AAAPAPTSSGHRTEKRKPQQPQCRPA 115
PS +++ EE+ A+ P ++QD++ E + PTSS E + ++ +
Sbjct: 58 PSQEEEDNHSDEEDRASEP-----KSQDQDSEVNELSRGPTSSPCEEEGDEGEEDR---- 108
Query: 116 GGTGQRRGSGSSPSAD-QQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQR 174
T R SS + + + D +EE PAP + EK + + + GT +
Sbjct: 109 --TSDLRDEASSVTRELDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEK-GEGTPRE 165
Query: 175 RGSRSSPSADQQGAQDREEE 194
G S ++ + + +E
Sbjct: 166 EGKAGVQSVGEKESLEAAKE 185
Score = 30.8 bits (68), Expect = 1.3
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 9/130 (6%)
Query: 18 SSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQ--QGAQDR----EEEA 71
S E + +E+ + P+ Q Q RG SSP ++ +G +DR +EA
Sbjct: 59 SQEEEDNHSDEEDRASEPKSQDQDSEVNELS--RGPTSSPCEEEGDEGEEDRTSDLRDEA 116
Query: 72 AAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSAD 131
++ + D +EE PAP EK + + GT + G S
Sbjct: 117 SSVTRELDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDE-EKGEGTPREEGKAGVQSVG 175
Query: 132 QQGAQDREEE 141
++ + + +E
Sbjct: 176 EKESLEAAKE 185
Score = 28.5 bits (62), Expect = 6.3
Identities = 30/154 (19%), Positives = 59/154 (38%), Gaps = 18/154 (11%)
Query: 120 QRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRS 179
+R +++ +DRE E R H E+ K +Q ++ +R +
Sbjct: 407 ERERENRQRERERERERDRERERRQREREREREH--ERDKERQRRKEEWERERAKRDEKD 464
Query: 180 SPSADQQGAQDREEEAA----AAPVPTSR------------GHRTEKRKRQQPQCRPAAG 223
D+ ++RE+E +P P SR G + ++ + R +
Sbjct: 465 RQHRDRDREKEREKEKGKPKPRSPQPPSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKS 524
Query: 224 TGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSS 257
++ G SPS ++R + A+A+ + SS
Sbjct: 525 PKKKLGVSVSPSRARRRRKTSASSASASNSSRSS 558
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 49.7 bits (117), Expect = 3e-06
Identities = 50/242 (20%), Positives = 97/242 (40%), Gaps = 18/242 (7%)
Query: 16 RESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAP 75
++ G E E T P ++ + + +++ S ++ D EE+++ A
Sbjct: 644 KQEPGGSHGSETEDTGRSLPSKKERSGKSHRHKKKKKHKKSSKHKRKHKADTEEKSSKAE 703
Query: 76 AADQ---QRAQDREEEAAAAPAPTSSGHRTEKRKPQQP----QCRPAGGTGQRRGSGSSP 128
+ ++ ++ + R++ ++APA + G + E P + R A QRR S P
Sbjct: 704 SGEKSKKRKKRKRKKNKSSAPADSERGPKPEPPGSGSPAPPRRRRRAQDDSQRR---SLP 760
Query: 129 SADQQGAQDREEEAAAAPAPTSRGHRTEKRK--PQQPQRRPAAGTGQRRGSRSSPSADQQ 186
+ ++G+ +++E + G R K + P QRR R RS PS+ +
Sbjct: 761 A--EEGSSGKKDEGGGGSSSQDHGGRKHKGELPPSSCQRRAGTKRSSRSSHRSQPSSGDE 818
Query: 187 GAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQR----RGSRSSPSADQQRAQ 242
+ D P+ E+ R + +G+R R SR S S+ +
Sbjct: 819 DSDDASSHRLHQKSPSQYSEEEEEEDSGSEHSRSRSRSGRRHSSHRSSRRSYSSSSDASS 878
Query: 243 DR 244
D+
Sbjct: 879 DQ 880
Score = 32.7 bits (73), Expect = 0.34
Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 30/164 (18%)
Query: 113 RPAGGTGQRRGSGSSPSA----DQQGAQDREEEAAAAPAPTSR-----GHRTEKRKPQQP 163
R +GG SGS+ S + G+ E E P+ + HR +K+K +
Sbjct: 624 RSSGGRMDAPASGSACSGLNKQEPGGSHGSETEDTGRSLPSKKERSGKSHRHKKKKKHKK 683
Query: 164 ----QRRPAAGTGQRRG-SRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQC 218
+R+ A T ++ + S + ++ + R++ ++AP + RG + E
Sbjct: 684 SSKHKRKHKADTEEKSSKAESGEKSKKRKKRKRKKNKSSAPADSERGPKPEP-------- 735
Query: 219 RPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTE 262
P +G+ +P ++RAQD + + SSG + E
Sbjct: 736 -PGSGS-------PAPPRRRRRAQDDSQRRSLPAEEGSSGKKDE 771
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 49.3 bits (116), Expect = 3e-06
Identities = 55/265 (20%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 3 PRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQ 62
PR ++D S + +T Q G+R GSG SAD
Sbjct: 336 PRSHDEDRASHGHSADSSRQSGTRHAETSSRGQTASSHEQARSSPGERHGSGHQQSADSS 395
Query: 63 GAQDREEEAAAAPAADQ-------QRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPA 115
A++ +D+ +A D E + + + SGH + Q Q
Sbjct: 396 RHSATGRGQASSAVSDRGHRGSSGSQASDSEGHSENSDTQSVSGHGKAGLRQQSHQESTR 455
Query: 116 GGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHR--TEKRKPQQPQRRPAAGTGQ 173
G +G+R SG S S+ Q + + ++A TS G R + + + R A+ GQ
Sbjct: 456 GRSGER--SGRSGSSLYQVSTHEQPDSAHGRTGTSTGGRQGSHHEQARDSSRHSASQEGQ 513
Query: 174 R--RGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSR 231
RG S +QG+ + + + H T + + + + + R+
Sbjct: 514 DTIRGHPGSSRGGRQGSHHEQSVNRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRN 573
Query: 232 SSPSADQQRAQDREEEAAAAPAPTS 256
S D R A++ A +S
Sbjct: 574 EEQSGDGTRHSGSRHHEASSQADSS 598
Score = 47.8 bits (112), Expect = 1e-05
Identities = 59/238 (24%), Positives = 89/238 (37%), Gaps = 38/238 (15%)
Query: 43 PAGGTGQRRGSGSSPSADQQG----------AQDREEEAAAAPAADQQRAQDREEEAAAA 92
P R+GS S D+ G +Q R + + + Q R +E +
Sbjct: 3438 PGSSRRGRQGSHYEQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRQTRNDEQSGD 3497
Query: 93 PAPTSSGHRTE-------KRKPQQPQCRPAGG-TGQRRGSGSSPSADQQG-AQDREEEAA 143
+ S H E R Q Q + AG T + +GS S +D QG ++D E +
Sbjct: 3498 GSRHSWSHHHEASTQADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERWSG 3557
Query: 144 AAPAPTSRGHR-TEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPT 202
+A SR HR + + + + R P + R G S + +Q E ++ +
Sbjct: 3558 SA----SRNHRGSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSGTHHAENSSGGQAAS 3613
Query: 203 SRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHR 260
S Q R +A G+R GS SAD R A+ A SGHR
Sbjct: 3614 S-----------HEQARSSA--GERHGSHHQQSADSSR-HSGIGHGQASSAVRDSGHR 3657
Score = 47.4 bits (111), Expect = 1e-05
Identities = 59/264 (22%), Positives = 96/264 (36%), Gaps = 35/264 (13%)
Query: 15 LRESSEGDQWLENEKTKPLRPQQQP-QCQPAGGTGQRRGSGSSPSADQQG---------- 63
+R+ S +Q +N + + Q + P R+GS S D+ G
Sbjct: 816 VRQGSHHEQARDNSRHSASQDGQDTIRGHPGSSRRGRQGSHHEQSVDRSGHSGSHHSHTT 875
Query: 64 AQDREEEAAAAPAADQQRAQDREEEAAAAPAPTS-------SGHRTEKRKPQQPQCRPAG 116
+Q R + + + R EE + + S S H R Q Q + G
Sbjct: 876 SQGRSDASRGQSGSRSASRTTRNEEQSRDGSRHSGSRHHEASSHADISRHSQAGQGQSEG 935
Query: 117 G-TGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRR 175
T +R+GS S +D +G + E + + + RG E+ + R P + R
Sbjct: 936 SRTSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHRGSAQEQSR--HGSRHPRSHHEDRA 993
Query: 176 GSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPS 235
G S + +Q E ++ +S ++ R P G+R GSR S
Sbjct: 994 GHGHSADSSRQSGTPHAETSSGGQAASSH-----EQARSSP--------GERHGSRHQQS 1040
Query: 236 ADQQRAQDREEEAAAAPAPTSSGH 259
AD R A++ A SGH
Sbjct: 1041 ADSSRHSGIPRRQASS-AVRDSGH 1063
Score = 47.4 bits (111), Expect = 1e-05
Identities = 56/250 (22%), Positives = 92/250 (36%), Gaps = 38/250 (15%)
Query: 43 PAGGTGQRRGSGSSPSADQQG----------AQDREEEAAAAPAADQQRAQDREEEAAAA 92
P G R+GS S D+ G Q R + + Q R EE +
Sbjct: 1493 PGSSRGGRQGSYHEQSVDRSGHSGYHHSHTTPQGRSDASHGQSGPRSASRQTRNEEQSGD 1552
Query: 93 PAPTSSGHRTE-------KRKPQQPQCRPAGG-TGQRRGSGSSPSADQQGAQDREEEAAA 144
+ S E R Q Q AG T +R+GS S D +G + E +
Sbjct: 1553 GSRHSGSRHHEPSTRAGSSRHSQVGQGESAGSKTSRRQGSSVSQDRDSEGHSEDSERRSE 1612
Query: 145 APAPTSRGHRTEK-----RKPQQPQRRPA-----AGTGQRRGSRSSPSADQQGAQDREEE 194
+ + G E+ R P+ Q A A + ++ G+R + ++ A +E+
Sbjct: 1613 SASRNHYGSAREQSRHGSRNPRSHQEDRASHGHSAESSRQSGTRHAETSSGGQAASSQEQ 1672
Query: 195 AAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRR-----GSRSSPSADQQRAQDREEEAA 249
A ++P G R R +Q +GTG+R+ G + + +A D E +
Sbjct: 1673 ARSSP-----GERHGSRHQQSADSSTDSGTGRRQDSSVVGDSGNRGSSGSQASDSEGHSE 1727
Query: 250 AAPAPTSSGH 259
+ + S H
Sbjct: 1728 ESDTQSVSAH 1737
Score = 46.6 bits (109), Expect = 2e-05
Identities = 39/207 (18%), Positives = 78/207 (37%), Gaps = 8/207 (3%)
Query: 55 SSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRP 114
S+ S+ Q G + E + A+ Q++A+ E + S+ T+ ++
Sbjct: 1646 SAESSRQSGTRHAETSSGGQAASSQEQARSSPGERHGSRHQQSADSSTDSGTGRRQDSSV 1705
Query: 115 AGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQR 174
G +G R GS S ++D +G + + + + + H QQ + G
Sbjct: 1706 VGDSGNR-GSSGSQASDSEGHSEESDTQSVSAHGQAGPH-------QQSHQESTRGQSGE 1757
Query: 175 RGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSP 234
R RS Q ++ E A P++ G + + ++ + R +A + R P
Sbjct: 1758 RSGRSGSFLYQVSTHEQSESAHGRTGPSTGGRQRSRHEQARDSSRHSASQEGQDTIRGHP 1817
Query: 235 SADQQRAQDREEEAAAAPAPTSSGHRT 261
+ + Q E + + S H +
Sbjct: 1818 GSSRGGRQGSHYEQSVDSSGHSGSHHS 1844
Score = 46.2 bits (108), Expect = 3e-05
Identities = 54/223 (24%), Positives = 78/223 (34%), Gaps = 32/223 (14%)
Query: 47 TGQRRGSGSSPSADQQ---GAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTE 103
TG R+GS + D +QD ++ P + ++ Q E + + S H +
Sbjct: 814 TGVRQGSHHEQARDNSRHSASQDGQDTIRGHPGSSRRGRQGSHHEQSVDRSGHSGSHHSH 873
Query: 104 KRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQP 163
G + RG S SA + R EE + + S E
Sbjct: 874 TTSQ--------GRSDASRGQSGSRSASRT---TRNEEQSRDGSRHSGSRHHEASSHADI 922
Query: 164 QRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAG 223
R AG GQ GSR+S +QD + E GH + + R G
Sbjct: 923 SRHSQAGQGQSEGSRTSRRQGSSVSQDSDSE----------GHSEDSERWSGSASRNHRG 972
Query: 224 TGQ---RRGSRSSPSADQQRA-----QDREEEAAAAPAPTSSG 258
+ Q R GSR S + RA D ++ A TSSG
Sbjct: 973 SAQEQSRHGSRHPRSHHEDRAGHGHSADSSRQSGTPHAETSSG 1015
Score = 46.2 bits (108), Expect = 3e-05
Identities = 54/275 (19%), Positives = 96/275 (34%), Gaps = 28/275 (10%)
Query: 3 PRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQ 62
PR + TR + +S +G + + ++ P + GQ +GS S +Q
Sbjct: 1537 PRSASRQTRNEE--QSGDGSR---HSGSRHHEPSTRAGSSRHSQVGQGESAGSKTSR-RQ 1590
Query: 63 GAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEK-RKPQQPQCRPAGGTGQR 121
G+ ++ + + D +R + A S H + R Q+ +
Sbjct: 1591 GSSVSQDRDSEGHSEDSERRSESASRNHYGSAREQSRHGSRNPRSHQEDRASHGHSAESS 1650
Query: 122 RGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQR------- 174
R SG+ + G Q + A +P G R R Q +GTG+R
Sbjct: 1651 RQSGTRHAETSSGGQAASSQEQARSSP---GERHGSRHQQSADSSTDSGTGRRQDSSVVG 1707
Query: 175 ----RGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGS 230
RGS S ++D +G + + + + + H QQ G R
Sbjct: 1708 DSGNRGSSGSQASDSEGHSEESDTQSVSAHGQAGPH-------QQSHQESTRGQSGERSG 1760
Query: 231 RSSPSADQQRAQDREEEAAAAPAPTSSGHRTEKRK 265
RS Q ++ E A P++ G + + +
Sbjct: 1761 RSGSFLYQVSTHEQSESAHGRTGPSTGGRQRSRHE 1795
Score = 43.5 bits (101), Expect = 2e-04
Identities = 51/245 (20%), Positives = 83/245 (33%), Gaps = 38/245 (15%)
Query: 36 QQQPQCQPAGGTGQRRGSGSSPSADQ-------------QGAQDREEEAAAAPAADQQRA 82
Q + P G R+GS S D+ QG D + + +A +Q
Sbjct: 1162 QDTIRAHPGSRRGGRQGSHHEQSVDRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRQTR 1221
Query: 83 QDREEEAAAAPAPTSSGHR-------TEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGA 135
+D++ + SG R + + Q + G+ R GSS S D
Sbjct: 1222 KDKQ----SGDGSRHSGSRHHEAASWADSSRHSQVGQEQSSGSRTSRHQGSSVSQDSDSE 1277
Query: 136 QDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEA 195
+ ++ + + + H + + + + R P R S + +Q E
Sbjct: 1278 RHSDDSERLSGSASRNHHGSSREQSRDGSRHPGFHQEDRASHGHSADSSRQSGTHHTE-- 1335
Query: 196 AAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPT 255
S H +Q + P G+R GSR SAD R A++ A
Sbjct: 1336 -------SSSHGQAVSSHEQARSSP----GERHGSRHQQSADSSRHSGIGHRQASS-AVR 1383
Query: 256 SSGHR 260
SGHR
Sbjct: 1384 DSGHR 1388
Score = 43.1 bits (100), Expect = 2e-04
Identities = 55/273 (20%), Positives = 101/273 (36%), Gaps = 29/273 (10%)
Query: 7 EQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQ--RRGSGSSPSADQQGA 64
+ +++ + R + L+ +T+ R + Q + + G + R SGS+ A
Sbjct: 266 KSSSQVNRSRHENTSQVPLQESRTRKRRGSRVSQDRDSEGHSEDSERHSGSASRNHHGSA 325
Query: 65 QDREEEAAAAPAA-DQQRAQ-----DREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGT 118
++ + + P + D+ RA D ++ A TSS +T Q
Sbjct: 326 WEQSRDGSRHPRSHDEDRASHGHSADSSRQSGTRHAETSSRGQTASSHEQA-----RSSP 380
Query: 119 GQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSR 178
G+R GSG SAD A+ A + RGHR Q + G + ++
Sbjct: 381 GERHGSGHQQSAD-SSRHSATGRGQASSAVSDRGHRGSSGS----QASDSEGHSENSDTQ 435
Query: 179 SSPSADQQGAQDREEEAAAAPVPTSRGHRT-----EKRKRQQPQC---RPAAGTGQRRGS 230
S + G + + + + R R+ + +QP R TG R+GS
Sbjct: 436 SVSGHGKAGLRQQSHQESTRGRSGERSGRSGSSLYQVSTHEQPDSAHGRTGTSTGGRQGS 495
Query: 231 RSSPSADQQR---AQDREEEAAAAPAPTSSGHR 260
+ D R +Q+ ++ P + G +
Sbjct: 496 HHEQARDSSRHSASQEGQDTIRGHPGSSRGGRQ 528
Score = 43.1 bits (100), Expect = 2e-04
Identities = 50/218 (22%), Positives = 81/218 (37%), Gaps = 18/218 (8%)
Query: 47 TGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHR----- 101
+G R SGS + + ++D + ++ +A Q +E A +S R
Sbjct: 1385 SGHRGSSGSQVTNSEGHSEDSDTQSVSAHGQAGPHQQSHKESARGQSGESSGRSRSFLYQ 1444
Query: 102 -TEKRKPQQPQCRPAGGTGQRRGS---GSSPSADQQGAQDREEEAAAAPAPTSRGHRTEK 157
+ + + + A TG R+GS + S+ +QD ++ P +SRG R
Sbjct: 1445 VSSHEQSESTHGQTAPSTGGRQGSRHEQARNSSRHSASQDGQDTIRGHPG-SSRGGRQGS 1503
Query: 158 RKPQQPQRRPAAG------TGQRRGSRSSPSADQQGA--QDREEEAAAAPVPTSRGHRTE 209
Q R +G T Q R S + + A Q R EE + S E
Sbjct: 1504 YHEQSVDRSGHSGYHHSHTTPQGRSDASHGQSGPRSASRQTRNEEQSGDGSRHSGSRHHE 1563
Query: 210 KRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEE 247
R G G+ GS++S +QDR+ E
Sbjct: 1564 PSTRAGSSRHSQVGQGESAGSKTSRRQGSSVSQDRDSE 1601
Score = 42.7 bits (99), Expect = 3e-04
Identities = 60/305 (19%), Positives = 99/305 (32%), Gaps = 50/305 (16%)
Query: 3 PRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQ 62
PR ++D S + +T Q Q G+R GS SAD
Sbjct: 1633 PRSHQEDRASHGHSAESSRQSGTRHAETSSGGQAASSQEQARSSPGERHGSRHQQSADSS 1692
Query: 63 ---GAQDREEEAAAAPAADQ----QRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPA 115
G R++ + + ++ +A D E + + + S H Q Q
Sbjct: 1693 TDSGTGRRQDSSVVGDSGNRGSSGSQASDSEGHSEESDTQSVSAHGQAGPHQQSHQESTR 1752
Query: 116 GGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRR--------- 166
G +G+R G S Q ++ E A P++ G + + + + R
Sbjct: 1753 GQSGERSGRSGS-FLYQVSTHEQSESAHGRTGPSTGGRQRSRHEQARDSSRHSASQEGQD 1811
Query: 167 -----PAAGTGQRRGSRSSPSADQQG----------AQDREE--EAAAAPVPTSRGHRTE 209
P + G R+GS S D G +Q+R + + SR R E
Sbjct: 1812 TIRGHPGSSRGGRQGSHYEQSVDSSGHSGSHHSHTTSQERSDVSRGQSGSRSVSRQTRNE 1871
Query: 210 KRK----------------RQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPA 253
K+ R G GQ G R+S + +QD + + + +
Sbjct: 1872 KQSGDGSRHSGSRHHEASSRADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDSQGHSEDS 1931
Query: 254 PTSSG 258
SG
Sbjct: 1932 ERWSG 1936
Score = 42.7 bits (99), Expect = 3e-04
Identities = 48/226 (21%), Positives = 82/226 (36%), Gaps = 19/226 (8%)
Query: 51 RGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHR-------TE 103
RG S ++D +G + + + + Q +E+A + SSG +
Sbjct: 2037 RGYSGSQASDSEGHSEDSDTQSVSAQGKAGPHQQSHKESARGQSGESSGRSGSFLYQVST 2096
Query: 104 KRKPQQPQCRPAGGTGQRRGSGSSPSADQQ---GAQDREEEAAAAPAPTSRGHRTEKRKP 160
+ + + A TG R+GS + D +Q+ ++ P P SRG R +
Sbjct: 2097 HEQSESTHGQSAPSTGGRQGSHYDQAQDSSRHSASQEGQDTIRGHPGP-SRGGRQGSHQE 2155
Query: 161 QQPQRRPAAGTGQRRGS---RSSPSADQQGAQDR-----EEEAAAAPVPTSRGHRTEKRK 212
Q R +G+ + RS S Q G++ ++E + S H E
Sbjct: 2156 QSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRKTYDKEQSGDGSRHSGSHHHEASS 2215
Query: 213 RQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSG 258
G GQ G R+S +QD + E + + SG
Sbjct: 2216 WADSSRHSLVGQGQSSGPRTSRPRGSSVSQDSDSEGHSEDSERRSG 2261
Score = 40.8 bits (94), Expect = 0.001
Identities = 44/232 (18%), Positives = 82/232 (35%), Gaps = 19/232 (8%)
Query: 52 GSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHR-------TEK 104
GS S ++D +G + + + + Q +E+A + SG +
Sbjct: 3334 GSSGSQASDSEGHSEESDTQSVSGHGQAGPHQQSHQESARDRSGGRSGRSGSFLYQVSTH 3393
Query: 105 RKPQQPQCRPAGGTGQRRGSGSSPSADQQ---GAQDREEEAAAAPAPTSRGHRTEKRKPQ 161
+ + R TG+R+GS + D +Q+ ++ P + RG R Q
Sbjct: 3394 EQSESAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSRRG-RQGSHYEQ 3452
Query: 162 QPQRRPAAGT--------GQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKR 213
R +G+ G+ SR + Q R +E + S H E +
Sbjct: 3453 SVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRQTRNDEQSGDGSRHSWSHHHEASTQ 3512
Query: 214 QQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTEKRK 265
+G GQ G R+S + +QD + + + + SG + +
Sbjct: 3513 ADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHR 3564
Score = 40.0 bits (92), Expect = 0.002
Identities = 52/234 (22%), Positives = 82/234 (35%), Gaps = 21/234 (8%)
Query: 51 RGSGSSPSADQQGAQDREE--------EAAAAPAADQQRAQDREEEAAAAPAPTSSGHRT 102
RGS S + D +G + + +A + Q+ A+DR E + T
Sbjct: 740 RGSSGSQATDSEGHSEDSDTQSVSGHGQAGHHQQSHQESARDRSGERSRRSGSFLYQVST 799
Query: 103 EKRKPQQPQCRPAGGTGQRRGSGSSPSADQQ---GAQDREEEAAAAPAPTSRGHRTEKRK 159
K+ + TG R+GS + D +QD ++ P + RG R
Sbjct: 800 HKQS-ESSHGWTGPSTGVRQGSHHEQARDNSRHSASQDGQDTIRGHPGSSRRG-RQGSHH 857
Query: 160 PQQPQRRPAAGTGQRRGS---RSSPSADQQGAQD-----REEEAAAAPVPTSRGHRTEKR 211
Q R +G+ + RS S Q G++ R EE + S E
Sbjct: 858 EQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNEEQSRDGSRHSGSRHHEAS 917
Query: 212 KRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTEKRK 265
AG GQ GSR+S +QD + E + + SG + +
Sbjct: 918 SHADISRHSQAGQGQSEGSRTSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHR 971
Score = 40.0 bits (92), Expect = 0.002
Identities = 52/218 (23%), Positives = 78/218 (35%), Gaps = 37/218 (16%)
Query: 43 PAGGTGQRRGSGSSPSADQQG----------AQDREEEAAAAPAADQQRAQDREEEAAAA 92
P G R+G S D G +Q R + + + R EE +
Sbjct: 3114 PGSSRGGRQGYHHEHSVDSSGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNEEQSGD 3173
Query: 93 PAPTS-------SGHRTEKRKPQQPQCRPAGGTGQRR-GSGSSPSADQQG-AQDREEEAA 143
+ S S H R Q Q + G RR GS S +D +G ++D E +
Sbjct: 3174 SSRHSVSRHHEASTHADISRHSQAVQGQSEGSRRSRRQGSSVSQDSDSEGHSEDSERWSG 3233
Query: 144 AAPAPTSRGHR-TEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPT 202
+A SR HR + + + + R P + R G S +Q E ++ +
Sbjct: 3234 SA----SRNHRGSVQEQSRHGSRHPRSHHEDRAGHGHSADRSRQSGTRHAETSSGGQAAS 3289
Query: 203 SRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQR 240
S ++ R P G+R GSR SAD R
Sbjct: 3290 SH-----EQARSSP--------GERHGSRHQQSADSSR 3314
Score = 39.7 bits (91), Expect = 0.003
Identities = 51/232 (21%), Positives = 84/232 (36%), Gaps = 20/232 (8%)
Query: 47 TGQRRGSGSSPSADQQGAQDREEEAAAA--PAADQQRAQDREEEAAAAPAPTSSG----H 100
+G R SGS S + ++D + ++ +A A Q++ +A SG
Sbjct: 3654 SGHRGSSGSQASDSEGHSEDSDTQSVSAHGQAGPHQQSHQESTRGRSAGRSGRSGSFLYQ 3713
Query: 101 RTEKRKPQQPQCRPAGGTGQRRGSGSSPSAD--QQGAQDREEEAAAAPAPTSRGHRTEKR 158
+ + + R TG R+GS + D + A ++ + RG R
Sbjct: 3714 VSTHEQSESAHGRAGPSTGGRQGSRHEQARDSSRHSASQEGQDTIRGHPGSRRGGRQGSY 3773
Query: 159 KPQQPQRRPAAG------TGQRRGSRS-SPSADQQGAQDREEEAAAAPVPTSRGHRTEKR 211
Q R +G T Q R S S + +++ E + G R +
Sbjct: 3774 HEQSVDRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRETRNEEQSGDGSRHSGSRHHEA 3833
Query: 212 KRQQPQCRPA-AGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHRTE 262
Q R + +G G+ GSR S +QD + EA P S R+E
Sbjct: 3834 STQADSSRHSQSGQGESAGSRRSRRQGSSVSQDSDSEA----YPEDSERRSE 3881
Score = 39.3 bits (90), Expect = 0.004
Identities = 49/235 (20%), Positives = 80/235 (34%), Gaps = 31/235 (13%)
Query: 43 PAGGTGQRRGSGSSPSADQQG----------AQDREEEAAAAPAADQQRAQDREEEAAAA 92
P G R+GS S ++ G +Q R + + + Q R EE +
Sbjct: 520 PGSSRGGRQGSHHEQSVNRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRNEEQSG- 578
Query: 93 PAPTSSGHRTEKRKPQQPQCRPAG-GTGQRRG------SGSSPSADQQGAQDREEEAAAA 145
SG R + Q R + G GQ G GSS S D E+ +
Sbjct: 579 DGTRHSGSRHHEASSQADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDSQGHSEDSERWS 638
Query: 146 PAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRG 205
+ + H + + + + R P + R G S + ++ + +++ +S
Sbjct: 639 GSASRNHHGSAQEQSRDGSRHPRSHHEDRAGHGHSADSSRKSGTRHTQNSSSGQAASSH- 697
Query: 206 HRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHR 260
Q R +AG +R GSR + A+ A SGHR
Sbjct: 698 ----------EQARSSAG--ERHGSRHQLQSADSSRHSGTGHGQASSAVRDSGHR 740
Score = 38.9 bits (89), Expect = 0.005
Identities = 49/217 (22%), Positives = 74/217 (34%), Gaps = 25/217 (11%)
Query: 47 TGQRRGSGSSPSADQQ---GAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTE 103
TG R+GS + D +Q+ ++ P + + Q E + SGH
Sbjct: 489 TGGRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSRGGRQGSHHEQSV----NRSGHSGS 544
Query: 104 KRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQP 163
Q R GQ SGS ++ Q R EE + S E
Sbjct: 545 HHSHTTSQGRSDASHGQ---SGSRSAS----RQTRNEEQSGDGTRHSGSRHHEASSQADS 597
Query: 164 QRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAG 223
R G GQ G R+S + +QD + S+GH + + R G
Sbjct: 598 SRHSQVGQGQSSGPRTSRNQGSSVSQDSD----------SQGHSEDSERWSGSASRNHHG 647
Query: 224 TGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHR 260
+ Q + SR + +DR +A + SG R
Sbjct: 648 SAQEQ-SRDGSRHPRSHHEDRAGHGHSADSSRKSGTR 683
Score = 38.9 bits (89), Expect = 0.005
Identities = 52/256 (20%), Positives = 86/256 (33%), Gaps = 23/256 (8%)
Query: 7 EQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQ---G 63
++ TR R S +L T + P+ TG R+GS + D
Sbjct: 3693 QESTRGRSAGRSGRSGSFLYQVSTHEQSESAHGRAGPS--TGGRQGSRHEQARDSSRHSA 3750
Query: 64 AQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRG 123
+Q+ ++ P + + Q E + + S H + G + G
Sbjct: 3751 SQEGQDTIRGHPGSRRGGRQGSYHEQSVDRSGHSGSHHSHTTSQ--------GRSDASHG 3802
Query: 124 SGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSA 183
S SA ++ R EE + + S E R +G G+ GSR S
Sbjct: 3803 QSGSRSASRE---TRNEEQSGDGSRHSGSRHHEASTQADSSRHSQSGQGESAGSRRSRRQ 3859
Query: 184 DQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQD 243
+QD + EA P R+E R ++ R GSR S+ + A
Sbjct: 3860 GSSVSQDSDSEA----YPEDSERRSESASRNH---HGSSREQSRDGSRHPGSSHRDTASH 3912
Query: 244 REEEAAAAPAPTSSGH 259
+ + + T+ H
Sbjct: 3913 VQSSPVQSDSSTAKEH 3928
Score = 38.1 bits (87), Expect = 0.008
Identities = 46/213 (21%), Positives = 73/213 (34%), Gaps = 36/213 (16%)
Query: 47 TGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRK 106
+G R SGS S ++ ++D + ++ +A Q +E A T SGH
Sbjct: 2682 SGHRGYSGSQASDNEGHSEDSDTQSVSAHGQAGSHQQSHQESARGRSGET-SGH------ 2734
Query: 107 PQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRR 166
S Q ++ E + P++RG + + + Q R
Sbjct: 2735 -------------------SGSFLYQVSTHEQSESSHGWTGPSTRGRQGSRHEQAQDSSR 2775
Query: 167 PAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQ 226
+A + R P + + G Q E + S GH Q R A GQ
Sbjct: 2776 HSASQDGQDTIRGHPGSSRGGRQGYHHEHSV----DSSGHSGSHHSHTTSQGRSDASRGQ 2831
Query: 227 RRGSRSSPSADQQRAQDREEEAAAAPAPTSSGH 259
GSRS+ R EE++ + S H
Sbjct: 2832 -SGSRSA-----SRTTRNEEQSGDGSRHSGSRH 2858
Score = 37.0 bits (84), Expect = 0.018
Identities = 46/213 (21%), Positives = 74/213 (34%), Gaps = 36/213 (16%)
Query: 47 TGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRK 106
+G R SGS S ++ ++D + ++ +A Q +E A T SGH
Sbjct: 3006 SGHRGYSGSQASDNEGHSEDSDTQSVSAHGQAGSHQQSHQESARGRSGET-SGH------ 3058
Query: 107 PQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRR 166
S Q ++ E + P++RG + + + Q R
Sbjct: 3059 -------------------SGSFLYQVSTHEQSESSHGWTGPSTRGRQGSRHEQAQDSSR 3099
Query: 167 PAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQ 226
+A + R P + + G Q E + S GH Q R A GQ
Sbjct: 3100 HSASQYGQDTIRGHPGSSRGGRQGYHHEHSV----DSSGHSGSHHSHTTSQGRSDASRGQ 3155
Query: 227 RRGSRSSPSADQQRAQDREEEAAAAPAPTSSGH 259
GSRS+ R EE++ + + S H
Sbjct: 3156 -SGSRSA-----SRTTRNEEQSGDSSRHSVSRH 3182
Score = 36.2 bits (82), Expect = 0.030
Identities = 41/179 (22%), Positives = 64/179 (35%), Gaps = 23/179 (12%)
Query: 83 QDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQG-AQDREEE 141
+ R + ++ S H + P Q T +RRGS S D +G ++D E
Sbjct: 259 RSRSSDGKSSSQVNRSRHENTSQVPLQES-----RTRKRRGSRVSQDRDSEGHSEDSERH 313
Query: 142 AAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVP 201
+ +A SR H +A R GSR S D+ A ++
Sbjct: 314 SGSA----SRNHHG------------SAWEQSRDGSRHPRSHDEDRASHGHSADSSRQSG 357
Query: 202 TSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSGHR 260
T + + + + + G+R GS SAD R A+ A + GHR
Sbjct: 358 TRHAETSSRGQTASSHEQARSSPGERHGSGHQQSADSSR-HSATGRGQASSAVSDRGHR 415
Score = 36.2 bits (82), Expect = 0.030
Identities = 50/229 (21%), Positives = 81/229 (35%), Gaps = 18/229 (7%)
Query: 47 TGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTS--SG----H 100
+G R SGS S + ++D + ++ +A Q +E A S SG
Sbjct: 2358 SGHRGSSGSQASDSEGHSEDSDTQSVSAHGQAGPHQQSHQESTRGRSAGRSGRSGSFLYQ 2417
Query: 101 RTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQG---AQDREEEAAAAPAPTSRGHRTEK 157
+ + + R TG R+GS + D +Q+ ++ P +S G R
Sbjct: 2418 VSTHEQSESAHGRTGTSTGGRQGSHHKQARDSSRHSTSQEGQDTIHGHPGSSSGG-RQGS 2476
Query: 158 RKPQQPQRRPAAG------TGQRRGSRSSPSADQQGA--QDREEEAAAAPVPTSRGHRTE 209
Q R +G T Q R S + + A Q R +E + S E
Sbjct: 2477 HYEQLVDRSGHSGSHHSHTTSQGRSDASHGHSGSRSASRQTRNDEQSGDGSRHSGSRHHE 2536
Query: 210 KRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSSG 258
R G GQ G R+S + +QD + + + + SG
Sbjct: 2537 ASSRADSSGHSQVGQGQSEGPRTSRNWGSSFSQDSDSQGHSEDSERWSG 2585
Score = 32.7 bits (73), Expect = 0.34
Identities = 57/238 (23%), Positives = 80/238 (33%), Gaps = 52/238 (21%)
Query: 48 GQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKP 107
GQ GS S +QD + E ++D E + +A S HR ++
Sbjct: 3200 GQSEGSRRSRRQGSSVSQDSDSEG---------HSEDSERWSGSA----SRNHRGSVQEQ 3246
Query: 108 QQPQCR-PAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRR 166
+ R P R G G S +Q E ++ A +S H + P
Sbjct: 3247 SRHGSRHPRSHHEDRAGHGHSADRSRQSGTRHAETSSGGQAASS--HEQARSSP------ 3298
Query: 167 PAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSR-------------GHRTEKRKR 213
G+R GSR SAD A++ V SR GH +E+
Sbjct: 3299 -----GERHGSRHQQSADSSRHSGIPRGQASSAVRDSRHWGSSGSQASDSEGH-SEESDT 3352
Query: 214 QQPQCRPAAGTGQ---------RRGSRSSPSAD--QQRAQDREEEAAAAPAPTSSGHR 260
Q AG Q R G RS S Q + + E+A TS+G R
Sbjct: 3353 QSVSGHGQAGPHQQSHQESARDRSGGRSGRSGSFLYQVSTHEQSESAHGRTRTSTGRR 3410
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 49.3 bits (116), Expect = 3e-06
Identities = 66/229 (28%), Positives = 85/229 (37%), Gaps = 39/229 (17%)
Query: 27 NEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDRE 86
+ +T+P P+ + G R GSG++ SA + + PAA R
Sbjct: 76 DSRTRPAARPPHPRTRSPPG---RSGSGTTFSAVPPRPSQHQSGSRLRPAAPGPRPGCSS 132
Query: 87 EEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQ-RRGSGSSPSADQQGAQDREEEAAAA 145
A+ APA + RT P +GG+G RG GS DQ GA R A
Sbjct: 133 ARASPAPAAPQAAART------APGRAASGGSGPGSRGQGS----DQVGA--RPSRAGGQ 180
Query: 146 PAP-TSRGHRTEKRKPQQPQR--------RPAAGTGQR------------RGSRSSPSAD 184
P P T R R R+ +P R RP +GTG R + SSPSAD
Sbjct: 181 PPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSAD 240
Query: 185 --QQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSR 231
Q A V G R + QP CR + RR R
Sbjct: 241 FSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYR 289
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 49.3 bits (116), Expect = 3e-06
Identities = 66/229 (28%), Positives = 85/229 (37%), Gaps = 39/229 (17%)
Query: 27 NEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDRE 86
+ +T+P P+ + G R GSG++ SA + + PAA R
Sbjct: 76 DSRTRPAARPPHPRTRSPPG---RSGSGTTFSAVPPRPSQHQSGSRLRPAAPGPRPGCSS 132
Query: 87 EEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQ-RRGSGSSPSADQQGAQDREEEAAAA 145
A+ APA + RT P +GG+G RG GS DQ GA R A
Sbjct: 133 ARASPAPAAPQAAART------APGRAASGGSGPGSRGQGS----DQVGA--RPSRAGGQ 180
Query: 146 PAP-TSRGHRTEKRKPQQPQR--------RPAAGTGQR------------RGSRSSPSAD 184
P P T R R R+ +P R RP +GTG R + SSPSAD
Sbjct: 181 PPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSAD 240
Query: 185 --QQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSR 231
Q A V G R + QP CR + RR R
Sbjct: 241 FSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYR 289
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 49.3 bits (116), Expect = 3e-06
Identities = 66/229 (28%), Positives = 85/229 (37%), Gaps = 39/229 (17%)
Query: 27 NEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDRE 86
+ +T+P P+ + G R GSG++ SA + + PAA R
Sbjct: 76 DSRTRPAARPPHPRTRSPPG---RSGSGTTFSAVPPRPSQHQSGSRLRPAAPGPRPGCSS 132
Query: 87 EEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQ-RRGSGSSPSADQQGAQDREEEAAAA 145
A+ APA + RT P +GG+G RG GS DQ GA R A
Sbjct: 133 ARASPAPAAPQAAART------APGRAASGGSGPGSRGQGS----DQVGA--RPSRAGGQ 180
Query: 146 PAP-TSRGHRTEKRKPQQPQR--------RPAAGTGQR------------RGSRSSPSAD 184
P P T R R R+ +P R RP +GTG R + SSPSAD
Sbjct: 181 PPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSAD 240
Query: 185 --QQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSR 231
Q A V G R + QP CR + RR R
Sbjct: 241 FSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYR 289
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 49.3 bits (116), Expect = 3e-06
Identities = 51/208 (24%), Positives = 69/208 (33%), Gaps = 32/208 (15%)
Query: 27 NEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDRE 86
++ P P +PQ P G Q +G P Q ++ P + +
Sbjct: 146 DKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQG---- 201
Query: 87 EEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAP 146
P P R+ + P +PQ P G Q +G P Q P
Sbjct: 202 ------PPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQ------------GP 243
Query: 147 APTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGH 206
P P +PQ PA G G + S SP QG +E P P + G+
Sbjct: 244 PPQGGNKPQGPPPPGKPQGPPAQG-GSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGN 302
Query: 207 RTEKRKRQQPQCRPAAGTGQRRGSRSSP 234
QQPQ PA GQ +G P
Sbjct: 303 ------PQQPQAPPA---GQPQGPPRPP 321
Score = 48.1 bits (113), Expect = 8e-06
Identities = 52/236 (22%), Positives = 73/236 (30%), Gaps = 30/236 (12%)
Query: 27 NEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDRE 86
++ P P +PQ P G Q +G P Q P + +
Sbjct: 85 DKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQG---- 140
Query: 87 EEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQ----QGAQDRE--- 139
P P R+ + P +PQ P G Q +G P Q QG + +
Sbjct: 141 ------PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPP 194
Query: 140 -EEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAA 198
P P R+ + P +PQ P G Q +G P QG +
Sbjct: 195 PPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGP-PPPPGKPQGPPPQGGNKPQG 253
Query: 199 PVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAP 254
P P + PQ PA G + + +RS P Q Q P P
Sbjct: 254 PPPPGK-----------PQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPP 298
Score = 38.5 bits (88), Expect = 0.006
Identities = 41/178 (23%), Positives = 57/178 (32%), Gaps = 16/178 (8%)
Query: 93 PAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQ----QGAQDRE----EEAAA 144
P P R+ + P +PQ P G Q +G P Q QG +
Sbjct: 80 PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQ 139
Query: 145 APAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPSADQ----QGAQDRE----EEAA 196
P P R+ + P +PQ P G Q +G P Q QG + +
Sbjct: 140 GPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKP 199
Query: 197 AAPVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSRSSPSADQQRAQDREEEAAAAPAP 254
P P R+ + +PQ P G Q +G P Q + P P
Sbjct: 200 QGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 257
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 48.9 bits (115), Expect = 5e-06
Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 17/179 (9%)
Query: 44 AGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTE 103
A GTG++R S SP Q QD+ A + + AQ + + +A P P +T+
Sbjct: 2358 AAGTGEQRQSKLSPQ--MQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQP-----QTQ 2410
Query: 104 KRKPQQP--QCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQ 161
+ P QP Q +P T S A AQ + + AA P S + Q
Sbjct: 2411 PQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQ 2470
Query: 162 QPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQCRP 220
P Q R S+PS G Q + + + P+P + + QPQ +P
Sbjct: 2471 SPS--------QTRIRPSTPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQP 2521
Score = 34.7 bits (78), Expect = 0.088
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 25/118 (21%)
Query: 62 QGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQR 121
+G + R + AAPAA E A AP P P P P GG R
Sbjct: 2 RGRRGRPPKQPAAPAA---------ERCAPAPPPP----------PPPPTSGPIGGLRSR 42
Query: 122 -RGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSR 178
RGS A Q E A + RG + +RKP P P + + RG R
Sbjct: 43 HRGSSRGRWAAAQA-----EVAPKTRLSSPRGGSSSRRKPPPPPPAPPSTSAPGRGGR 95
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.303 0.118 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,714,230
Number of Sequences: 37866
Number of extensions: 890390
Number of successful extensions: 11496
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 1332
Number of HSP's that attempted gapping in prelim test: 6510
Number of HSP's gapped (non-prelim): 4467
length of query: 265
length of database: 18,247,518
effective HSP length: 100
effective length of query: 165
effective length of database: 14,460,918
effective search space: 2386051470
effective search space used: 2386051470
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.