Guide to the Human Genome
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Name: PRR5L Sequence: fasta or formatted (240aa) NCBI GI: 237757353
Description:

protor-2 isoform b

Referenced in:

Kidney
mTOR Pathway

Other entries for this name:
alt prot [368aa] protor-2 isoform a
alt prot [368aa] protor-2 isoform a
alt prot [205aa] protor-2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         14           1
 C cysteine            2.1          5           1
 D aspartate           2.5          6           1
 E glutamate          10.4         25           2
 F phenylalanine       4.2         10           2
 G glycine             6.2         15           1
 H histidine           2.9          7           1
 I isoleucine          3.3          8           1
 K lysine              3.3          8           1
 L leucine            12.1         29           3
 M methionine          2.1          5           2
 N asparagine          3.8          9           1
 P proline             7.1         17           3
 Q glutamine           4.2         10           1
 R arginine            5.0         12           2
 S serine             10.0         24           2
 T threonine           5.8         14           1
 V valine              6.2         15           2
 W tryptophan          0.4          1           1
 Y tyrosine            2.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protor-2 isoform b 
PRR5L                 0.948   protor-2 isoform a 
PRR5L                 0.948   protor-2 isoform a 
PRR5L                 0.242   protor-2 isoform c 
PRR5                  0.197   proline rich 5 (renal) isoform 2 
PRR5                  0.197   proline rich 5 (renal) isoform 1 
PRR5                  0.197   proline rich 5 (renal) isoform 2 
PRR5                  0.122   proline rich 5 (renal) isoform 3 
PRR5                  0.122   proline rich 5 (renal) isoform 3 
LOC553158             0.046   PRR5-ARHGAP8 fusion protein 
XIRP1                 0.015   xin actin-binding repeat containing 1 
FNDC1                 0.015   fibronectin type III domain containing 1 
KIAA0562              0.013   glycine-, glutamate-, thienylcyclohexylpiperidine-bin...
RIN2                  0.011   Ras and Rab interactor 2 
RERE                  0.011   atrophin-1 like protein isoform b 
RERE                  0.011   atrophin-1 like protein isoform a 
RERE                  0.011   atrophin-1 like protein isoform a 
HERC1                 0.011   guanine nucleotide exchange factor p532 
MKI67                 0.009   antigen identified by monoclonal antibody Ki-67 iso...
MKI67                 0.009   antigen identified by monoclonal antibody Ki-67 iso...
MAP3K9                0.009   mitogen-activated protein kinase kinase kinase 9 [Ho...
EXPH5                 0.007   exophilin 5 isoform c 
EXPH5                 0.007   exophilin 5 isoform b 
EXPH5                 0.007   exophilin 5 isoform a 
ZMIZ1                 0.007   retinoic acid induced 17 
RAC1                  0.007   ras-related C3 botulinum toxin substrate 1 isoform Ra...
STIP1                 0.007   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
SLC4A5                0.007   sodium bicarbonate transporter 4 isoform a 
SLC4A5                0.007   sodium bicarbonate transporter 4 isoform c 
COL18A1               0.007   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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