Guide to the Human Genome
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Name: PRR5L Sequence: fasta or formatted (368aa) NCBI GI: 237757349
Description:

protor-2 isoform a

Referenced in:

Kidney
mTOR Pathway

Other entries for this name:
alt mRNA [368aa] protor-2 isoform a
alt prot [240aa] protor-2 isoform b
alt prot [205aa] protor-2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         22           2
 C cysteine            1.4          5           1
 D aspartate           2.4          9           1
 E glutamate           7.9         29           2
 F phenylalanine       4.6         17           2
 G glycine             6.2         23           3
 H histidine           2.2          8           1
 I isoleucine          4.1         15           1
 K lysine              3.5         13           1
 L leucine            14.1         52           4
 M methionine          2.2          8           2
 N asparagine          3.8         14           1
 P proline             6.5         24           3
 Q glutamine           5.4         20           1
 R arginine            6.0         22           2
 S serine             10.3         38           4
 T threonine           4.6         17           1
 V valine              6.2         23           2
 W tryptophan          0.5          2           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protor-2 isoform a 
PRR5L                 1.000   protor-2 isoform a 
PRR5L                 0.620   protor-2 isoform b 
PRR5L                 0.507   protor-2 isoform c 
PRR5                  0.290   proline rich 5 (renal) isoform 1 
PRR5                  0.284   proline rich 5 (renal) isoform 2 
PRR5                  0.284   proline rich 5 (renal) isoform 2 
PRR5                  0.177   proline rich 5 (renal) isoform 3 
PRR5                  0.177   proline rich 5 (renal) isoform 3 
LOC553158             0.089   PRR5-ARHGAP8 fusion protein 
XIRP1                 0.010   xin actin-binding repeat containing 1 
FNDC1                 0.010   fibronectin type III domain containing 1 
KIAA0562              0.009   glycine-, glutamate-, thienylcyclohexylpiperidine-bin...
RIN2                  0.007   Ras and Rab interactor 2 
FANCM                 0.007   Fanconi anemia, complementation group M 
RERE                  0.007   atrophin-1 like protein isoform b 
RERE                  0.007   atrophin-1 like protein isoform a 
RERE                  0.007   atrophin-1 like protein isoform a 
MKI67                 0.006   antigen identified by monoclonal antibody Ki-67 iso...
MKI67                 0.006   antigen identified by monoclonal antibody Ki-67 iso...
MAP3K9                0.006   mitogen-activated protein kinase kinase kinase 9 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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